Multiple sequence alignment - TraesCS4D01G341300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G341300 chr4D 100.000 3527 0 0 1 3527 498048795 498045269 0.000000e+00 6514.0
1 TraesCS4D01G341300 chr4D 96.296 108 4 0 2822 2929 13198382 13198275 1.010000e-40 178.0
2 TraesCS4D01G341300 chr4B 93.636 1430 82 8 1411 2834 640019066 640017640 0.000000e+00 2128.0
3 TraesCS4D01G341300 chr4B 90.063 1419 87 27 1 1397 640020618 640019232 0.000000e+00 1790.0
4 TraesCS4D01G341300 chr4B 92.025 326 18 2 2957 3274 514068111 514068436 5.370000e-123 451.0
5 TraesCS4D01G341300 chr4B 96.063 254 10 0 3274 3527 640017611 640017358 7.040000e-112 414.0
6 TraesCS4D01G341300 chr4B 95.146 103 4 1 2826 2927 260038696 260038594 1.010000e-35 161.0
7 TraesCS4D01G341300 chr4B 100.000 29 0 0 2921 2949 640017645 640017617 2.000000e-03 54.7
8 TraesCS4D01G341300 chr5A 89.534 1223 101 16 1631 2829 678573825 678572606 0.000000e+00 1524.0
9 TraesCS4D01G341300 chr5A 93.772 562 17 9 846 1397 678574817 678574264 0.000000e+00 828.0
10 TraesCS4D01G341300 chr5A 91.483 317 21 2 2958 3274 68969632 68969942 6.990000e-117 431.0
11 TraesCS4D01G341300 chr5A 84.583 240 28 7 1411 1643 678574210 678573973 2.740000e-56 230.0
12 TraesCS4D01G341300 chr6D 94.154 325 11 2 2958 3274 459281089 459281413 4.090000e-134 488.0
13 TraesCS4D01G341300 chr7A 92.767 318 22 1 2958 3274 5753009 5753326 3.210000e-125 459.0
14 TraesCS4D01G341300 chr7A 99.000 100 1 0 2823 2922 73807272 73807173 2.800000e-41 180.0
15 TraesCS4D01G341300 chr7A 95.238 105 5 0 2818 2922 732378086 732377982 2.180000e-37 167.0
16 TraesCS4D01G341300 chr6A 93.082 318 15 4 2958 3274 31262744 31263055 3.210000e-125 459.0
17 TraesCS4D01G341300 chr2D 91.743 327 17 3 2958 3274 3954514 3954188 2.500000e-121 446.0
18 TraesCS4D01G341300 chr2D 91.743 327 17 3 2958 3274 4016708 4016382 2.500000e-121 446.0
19 TraesCS4D01G341300 chr2D 96.117 103 4 0 2824 2926 382198252 382198150 6.060000e-38 169.0
20 TraesCS4D01G341300 chr5B 91.385 325 20 2 2958 3274 239702588 239702912 4.180000e-119 438.0
21 TraesCS4D01G341300 chr5B 91.077 325 21 2 2958 3274 636932421 636932097 1.940000e-117 433.0
22 TraesCS4D01G341300 chr7D 94.595 111 5 1 2820 2929 168580021 168579911 1.680000e-38 171.0
23 TraesCS4D01G341300 chr3D 96.190 105 3 1 2820 2923 292887848 292887744 1.680000e-38 171.0
24 TraesCS4D01G341300 chr5D 96.154 104 3 1 2824 2927 9123994 9123892 6.060000e-38 169.0
25 TraesCS4D01G341300 chr5D 93.636 110 7 0 2820 2929 228446956 228447065 7.830000e-37 165.0
26 TraesCS4D01G341300 chr1D 100.000 33 0 0 21 53 415424883 415424851 1.060000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G341300 chr4D 498045269 498048795 3526 True 6514.000000 6514 100.000000 1 3527 1 chr4D.!!$R2 3526
1 TraesCS4D01G341300 chr4B 640017358 640020618 3260 True 1096.675000 2128 94.940500 1 3527 4 chr4B.!!$R2 3526
2 TraesCS4D01G341300 chr5A 678572606 678574817 2211 True 860.666667 1524 89.296333 846 2829 3 chr5A.!!$R1 1983

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
517 537 0.250727 CATGTGACCCCGTTGAACCT 60.251 55.0 0.0 0.0 0.00 3.50 F
532 552 0.331616 AACCTGGCCCTAATGACACC 59.668 55.0 0.0 0.0 0.00 4.16 F
1625 1841 0.249489 CCGTGTTCGATCCCTGATCC 60.249 60.0 0.0 0.0 35.83 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1605 1820 0.249489 GATCAGGGATCGAACACGGG 60.249 60.0 0.0 0.00 29.12 5.28 R
2389 2770 0.525668 CCACGAGAATCTCCGGTTCG 60.526 60.0 0.0 5.59 37.31 3.95 R
2951 3351 0.175989 GAGAATCCGGTTCCGCTCTT 59.824 55.0 0.0 0.00 37.56 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 92 9.906660 TGCAACACGAGAATATTTCTTTAAAAT 57.093 25.926 0.00 0.00 40.87 1.82
113 117 5.753744 TCGTGCACACTTTTTAATGGTAAG 58.246 37.500 18.64 0.00 0.00 2.34
168 173 7.267128 ACACATGTTTCAGAAATTTCACACAT 58.733 30.769 19.99 16.50 0.00 3.21
170 175 8.908678 CACATGTTTCAGAAATTTCACACATAG 58.091 33.333 19.99 15.30 0.00 2.23
185 190 4.146961 CACACATAGCTTTTTGAAACGCAG 59.853 41.667 7.54 0.86 35.82 5.18
190 195 1.516864 GCTTTTTGAAACGCAGGAACG 59.483 47.619 0.70 0.00 33.81 3.95
201 206 2.098443 ACGCAGGAACGTTTTTCATTGT 59.902 40.909 0.46 0.00 45.75 2.71
205 210 2.048498 GGAACGTTTTTCATTGTCGCC 58.952 47.619 0.46 0.00 0.00 5.54
224 229 3.309410 CGCCAACATTGTTTTTGAAAGCT 59.691 39.130 0.00 0.00 0.00 3.74
230 235 8.277713 CCAACATTGTTTTTGAAAGCTATCAAG 58.722 33.333 0.00 0.00 40.21 3.02
232 237 9.768662 AACATTGTTTTTGAAAGCTATCAAGAT 57.231 25.926 0.00 0.00 40.21 2.40
233 238 9.768662 ACATTGTTTTTGAAAGCTATCAAGATT 57.231 25.926 0.00 0.00 40.21 2.40
352 359 9.863845 AAAAAGAAAAAGAAAATTAGGACGTCA 57.136 25.926 18.91 0.00 0.00 4.35
354 361 8.851960 AAGAAAAAGAAAATTAGGACGTCAAC 57.148 30.769 18.91 0.05 0.00 3.18
355 362 7.992008 AGAAAAAGAAAATTAGGACGTCAACA 58.008 30.769 18.91 0.00 0.00 3.33
400 413 2.036731 GGCCAACCCAACCCCTAC 59.963 66.667 0.00 0.00 0.00 3.18
401 414 2.360726 GCCAACCCAACCCCTACG 60.361 66.667 0.00 0.00 0.00 3.51
402 415 2.360726 CCAACCCAACCCCTACGC 60.361 66.667 0.00 0.00 0.00 4.42
403 416 2.744709 CAACCCAACCCCTACGCG 60.745 66.667 3.53 3.53 0.00 6.01
404 417 4.024545 AACCCAACCCCTACGCGG 62.025 66.667 12.47 0.00 0.00 6.46
414 427 4.451150 CTACGCGGCTGCCTTCCA 62.451 66.667 17.92 0.00 38.08 3.53
415 428 4.752879 TACGCGGCTGCCTTCCAC 62.753 66.667 17.92 0.00 38.08 4.02
418 431 3.741476 GCGGCTGCCTTCCACTTG 61.741 66.667 17.92 0.00 33.98 3.16
419 432 3.741476 CGGCTGCCTTCCACTTGC 61.741 66.667 17.92 0.00 0.00 4.01
457 470 3.928779 GCGGGCCCATCTGATCGA 61.929 66.667 24.92 0.00 0.00 3.59
460 473 1.072159 GGGCCCATCTGATCGAAGG 59.928 63.158 19.95 2.97 0.00 3.46
469 482 5.011533 CCCATCTGATCGAAGGAGTATTTCT 59.988 44.000 9.44 0.00 32.13 2.52
472 485 6.775594 TCTGATCGAAGGAGTATTTCTTCA 57.224 37.500 7.03 0.00 39.30 3.02
473 486 6.800543 TCTGATCGAAGGAGTATTTCTTCAG 58.199 40.000 7.03 0.00 39.30 3.02
474 487 5.907207 TGATCGAAGGAGTATTTCTTCAGG 58.093 41.667 7.03 0.00 39.30 3.86
476 489 5.995565 TCGAAGGAGTATTTCTTCAGGAA 57.004 39.130 7.03 0.00 39.30 3.36
478 491 5.715279 TCGAAGGAGTATTTCTTCAGGAAGA 59.285 40.000 7.62 7.62 44.94 2.87
479 492 6.039616 CGAAGGAGTATTTCTTCAGGAAGAG 58.960 44.000 11.22 0.00 46.80 2.85
480 493 5.948742 AGGAGTATTTCTTCAGGAAGAGG 57.051 43.478 11.22 0.00 46.80 3.69
481 494 4.163268 AGGAGTATTTCTTCAGGAAGAGGC 59.837 45.833 11.22 4.62 46.80 4.70
482 495 4.080863 GGAGTATTTCTTCAGGAAGAGGCA 60.081 45.833 11.22 1.95 46.80 4.75
483 496 5.491982 GAGTATTTCTTCAGGAAGAGGCAA 58.508 41.667 11.22 4.81 46.80 4.52
514 534 1.074072 CCCATGTGACCCCGTTGAA 59.926 57.895 0.00 0.00 0.00 2.69
515 535 1.241315 CCCATGTGACCCCGTTGAAC 61.241 60.000 0.00 0.00 0.00 3.18
516 536 1.241315 CCATGTGACCCCGTTGAACC 61.241 60.000 0.00 0.00 0.00 3.62
517 537 0.250727 CATGTGACCCCGTTGAACCT 60.251 55.000 0.00 0.00 0.00 3.50
518 538 0.250727 ATGTGACCCCGTTGAACCTG 60.251 55.000 0.00 0.00 0.00 4.00
519 539 1.599797 GTGACCCCGTTGAACCTGG 60.600 63.158 0.00 0.00 0.00 4.45
527 547 1.094785 CGTTGAACCTGGCCCTAATG 58.905 55.000 0.00 0.00 0.00 1.90
532 552 0.331616 AACCTGGCCCTAATGACACC 59.668 55.000 0.00 0.00 0.00 4.16
540 560 2.706190 GCCCTAATGACACCTGAGGTAT 59.294 50.000 2.59 0.00 32.11 2.73
580 603 6.007076 TGCTTAATGAAACACCAGACCATAA 58.993 36.000 0.00 0.00 0.00 1.90
657 680 5.357032 ACCGATAACATTCAGGAAACCATTC 59.643 40.000 0.00 0.00 34.66 2.67
685 708 4.321156 GGAAACTTGTATGCTGCAATGTCA 60.321 41.667 6.36 0.85 0.00 3.58
687 710 2.751259 ACTTGTATGCTGCAATGTCAGG 59.249 45.455 6.36 6.83 34.74 3.86
688 711 1.753930 TGTATGCTGCAATGTCAGGG 58.246 50.000 6.36 0.00 34.74 4.45
692 715 0.895100 TGCTGCAATGTCAGGGGTTC 60.895 55.000 0.00 0.00 34.74 3.62
702 725 2.758979 TGTCAGGGGTTCGAGATCTTAC 59.241 50.000 0.00 0.00 0.00 2.34
711 734 5.686397 GGGTTCGAGATCTTACGTCTAAATG 59.314 44.000 0.00 0.00 0.00 2.32
767 790 9.672086 TTTATAAATTTGGTCAAACGTGAGAAG 57.328 29.630 0.00 0.00 33.27 2.85
802 825 5.359576 AGGCAAGCCGAATATGTTAATGAAA 59.640 36.000 5.28 0.00 41.95 2.69
912 936 3.393472 AGATTTCATCTCCTGCCGC 57.607 52.632 0.00 0.00 33.42 6.53
913 937 0.543277 AGATTTCATCTCCTGCCGCA 59.457 50.000 0.00 0.00 33.42 5.69
1165 1207 2.183811 CTGAGGAGCCTGTCGCAG 59.816 66.667 0.00 0.52 41.38 5.18
1166 1208 4.074526 TGAGGAGCCTGTCGCAGC 62.075 66.667 0.00 0.00 41.38 5.25
1397 1439 8.261492 ACTGAACTTATTCTGCTATCTTGTTG 57.739 34.615 0.00 0.00 37.30 3.33
1398 1440 7.880195 ACTGAACTTATTCTGCTATCTTGTTGT 59.120 33.333 0.00 0.00 37.30 3.32
1400 1442 9.371136 TGAACTTATTCTGCTATCTTGTTGTAG 57.629 33.333 0.00 0.00 35.69 2.74
1401 1443 9.587772 GAACTTATTCTGCTATCTTGTTGTAGA 57.412 33.333 0.00 0.00 31.55 2.59
1402 1444 9.944376 AACTTATTCTGCTATCTTGTTGTAGAA 57.056 29.630 0.00 0.00 38.25 2.10
1405 1447 7.706281 ATTCTGCTATCTTGTTGTAGAATCG 57.294 36.000 0.00 0.00 39.42 3.34
1407 1449 6.266323 TCTGCTATCTTGTTGTAGAATCGTC 58.734 40.000 0.00 0.00 0.00 4.20
1408 1450 6.095580 TCTGCTATCTTGTTGTAGAATCGTCT 59.904 38.462 0.00 0.00 37.95 4.18
1424 1631 4.537135 TCGTCTTTCTGTATTTGCTCCT 57.463 40.909 0.00 0.00 0.00 3.69
1425 1632 4.245660 TCGTCTTTCTGTATTTGCTCCTG 58.754 43.478 0.00 0.00 0.00 3.86
1431 1638 4.901197 TCTGTATTTGCTCCTGGTACAA 57.099 40.909 0.00 0.00 38.70 2.41
1441 1648 4.103469 TGCTCCTGGTACAAAGGTTAAGAA 59.897 41.667 12.27 0.00 38.70 2.52
1443 1650 5.181433 GCTCCTGGTACAAAGGTTAAGAAAG 59.819 44.000 12.27 3.83 38.70 2.62
1445 1652 7.377696 TCCTGGTACAAAGGTTAAGAAAGTA 57.622 36.000 12.27 0.00 38.70 2.24
1446 1653 7.219322 TCCTGGTACAAAGGTTAAGAAAGTAC 58.781 38.462 12.27 0.00 38.70 2.73
1451 1658 8.150296 GGTACAAAGGTTAAGAAAGTACCAGTA 58.850 37.037 12.51 0.00 45.67 2.74
1455 1662 6.683312 AGGTTAAGAAAGTACCAGTAGCTT 57.317 37.500 0.00 0.00 34.32 3.74
1471 1678 6.653320 CCAGTAGCTTGTTTGTACCTTAATCA 59.347 38.462 0.00 0.00 0.00 2.57
1480 1687 8.001881 TGTTTGTACCTTAATCAACATGTTGT 57.998 30.769 31.99 19.78 41.16 3.32
1532 1747 4.522789 CACTACCCTGCTAACCATTTTGTT 59.477 41.667 0.00 0.00 0.00 2.83
1537 1752 4.869861 CCCTGCTAACCATTTTGTTTATGC 59.130 41.667 0.00 0.00 0.00 3.14
1625 1841 0.249489 CCGTGTTCGATCCCTGATCC 60.249 60.000 0.00 0.00 35.83 3.36
1675 2051 6.880529 TGCATGATTCGTCACCATATATGATT 59.119 34.615 14.54 0.00 0.00 2.57
1816 2194 8.274248 GCAAGTACTACAAAGTAAACTGAAGAC 58.726 37.037 0.00 0.00 39.90 3.01
1817 2195 8.477709 CAAGTACTACAAAGTAAACTGAAGACG 58.522 37.037 0.00 0.00 39.90 4.18
1826 2204 9.931210 CAAAGTAAACTGAAGACGTTTTAGAAT 57.069 29.630 0.00 0.00 36.18 2.40
1836 2214 7.860373 TGAAGACGTTTTAGAATTTGGAACATG 59.140 33.333 0.00 0.00 39.30 3.21
1839 2217 8.842280 AGACGTTTTAGAATTTGGAACATGTAA 58.158 29.630 0.00 0.00 39.30 2.41
1840 2218 9.620660 GACGTTTTAGAATTTGGAACATGTAAT 57.379 29.630 0.00 0.00 39.30 1.89
1851 2229 6.509418 TGGAACATGTAATTAGTTGGCTTC 57.491 37.500 0.00 0.00 0.00 3.86
1859 2237 7.591006 TGTAATTAGTTGGCTTCTTAGTTCG 57.409 36.000 0.00 0.00 0.00 3.95
1863 2241 8.611654 AATTAGTTGGCTTCTTAGTTCGTTTA 57.388 30.769 0.00 0.00 0.00 2.01
1865 2243 6.296365 AGTTGGCTTCTTAGTTCGTTTAAC 57.704 37.500 0.00 0.00 38.46 2.01
1881 2259 7.633361 TCGTTTAACTAAAGCTACTTCACTG 57.367 36.000 0.00 0.00 0.00 3.66
1894 2272 9.672673 AAGCTACTTCACTGTATTATGTCATTT 57.327 29.630 0.00 0.00 0.00 2.32
1975 2353 8.883731 TGAAGAAGTTTTAGAAGTCAGAAACAG 58.116 33.333 10.31 0.00 35.13 3.16
2023 2403 5.381174 TTGAACAAGGCTGATTCATTCTG 57.619 39.130 12.87 0.00 32.61 3.02
2026 2406 3.428532 ACAAGGCTGATTCATTCTGCTT 58.571 40.909 0.00 0.00 45.71 3.91
2101 2481 7.451255 TGATGGATCCAAAATGTAAGTTTCAGT 59.549 33.333 20.67 0.00 27.89 3.41
2105 2485 7.174946 GGATCCAAAATGTAAGTTTCAGTCTGA 59.825 37.037 6.95 0.00 27.89 3.27
2259 2640 5.563671 GCAAAAGAAGACAGAGTTCCAATCC 60.564 44.000 0.00 0.00 0.00 3.01
2389 2770 6.728200 TCAATAAGATTTGCCATCGACAATC 58.272 36.000 0.00 0.00 0.00 2.67
2457 2838 1.996191 GAATCGCTCGAGAAAGCTGTT 59.004 47.619 18.75 0.00 40.23 3.16
2523 2904 3.555795 CGTATGCTATCATCAACAGGGCT 60.556 47.826 0.00 0.00 34.22 5.19
2564 2945 5.094812 GTGCTCAACATTTCGCATTATTGA 58.905 37.500 0.00 0.00 34.60 2.57
2755 3155 2.958355 ACAGTTGCAATGGCTTTGTAGT 59.042 40.909 13.79 2.65 41.91 2.73
2829 3229 5.419542 TGCACATCCTCTTAACATGTACTC 58.580 41.667 0.00 0.00 0.00 2.59
2830 3230 4.811557 GCACATCCTCTTAACATGTACTCC 59.188 45.833 0.00 0.00 0.00 3.85
2831 3231 5.360591 CACATCCTCTTAACATGTACTCCC 58.639 45.833 0.00 0.00 0.00 4.30
2832 3232 5.129485 CACATCCTCTTAACATGTACTCCCT 59.871 44.000 0.00 0.00 0.00 4.20
2833 3233 5.726793 ACATCCTCTTAACATGTACTCCCTT 59.273 40.000 0.00 0.00 0.00 3.95
2834 3234 5.934402 TCCTCTTAACATGTACTCCCTTC 57.066 43.478 0.00 0.00 0.00 3.46
2835 3235 4.401519 TCCTCTTAACATGTACTCCCTTCG 59.598 45.833 0.00 0.00 0.00 3.79
2836 3236 4.159879 CCTCTTAACATGTACTCCCTTCGT 59.840 45.833 0.00 0.00 0.00 3.85
2837 3237 5.320549 TCTTAACATGTACTCCCTTCGTC 57.679 43.478 0.00 0.00 0.00 4.20
2838 3238 4.159135 TCTTAACATGTACTCCCTTCGTCC 59.841 45.833 0.00 0.00 0.00 4.79
2839 3239 1.192428 ACATGTACTCCCTTCGTCCC 58.808 55.000 0.00 0.00 0.00 4.46
2840 3240 1.191535 CATGTACTCCCTTCGTCCCA 58.808 55.000 0.00 0.00 0.00 4.37
2841 3241 1.553248 CATGTACTCCCTTCGTCCCAA 59.447 52.381 0.00 0.00 0.00 4.12
2842 3242 1.719529 TGTACTCCCTTCGTCCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
2843 3243 2.048601 TGTACTCCCTTCGTCCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
2844 3244 2.640826 TGTACTCCCTTCGTCCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
2845 3245 3.839490 TGTACTCCCTTCGTCCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
2846 3246 4.286549 TGTACTCCCTTCGTCCCAAAATAA 59.713 41.667 0.00 0.00 0.00 1.40
2847 3247 3.951663 ACTCCCTTCGTCCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
2848 3248 3.329814 ACTCCCTTCGTCCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
2849 3249 3.681593 TCCCTTCGTCCCAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
2850 3250 3.073356 TCCCTTCGTCCCAAAATAAGTGT 59.927 43.478 0.00 0.00 0.00 3.55
2851 3251 3.439129 CCCTTCGTCCCAAAATAAGTGTC 59.561 47.826 0.00 0.00 0.00 3.67
2852 3252 4.324267 CCTTCGTCCCAAAATAAGTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
2853 3253 4.760204 CCTTCGTCCCAAAATAAGTGTCTT 59.240 41.667 0.00 0.00 0.00 3.01
2854 3254 5.935789 CCTTCGTCCCAAAATAAGTGTCTTA 59.064 40.000 0.00 0.00 0.00 2.10
2855 3255 6.428771 CCTTCGTCCCAAAATAAGTGTCTTAA 59.571 38.462 0.00 0.00 0.00 1.85
2856 3256 6.790285 TCGTCCCAAAATAAGTGTCTTAAC 57.210 37.500 0.00 0.00 0.00 2.01
2857 3257 5.702209 TCGTCCCAAAATAAGTGTCTTAACC 59.298 40.000 0.00 0.00 0.00 2.85
2858 3258 5.704053 CGTCCCAAAATAAGTGTCTTAACCT 59.296 40.000 0.00 0.00 0.00 3.50
2859 3259 6.206048 CGTCCCAAAATAAGTGTCTTAACCTT 59.794 38.462 0.00 0.00 0.00 3.50
2860 3260 7.388500 CGTCCCAAAATAAGTGTCTTAACCTTA 59.612 37.037 0.00 0.00 0.00 2.69
2861 3261 8.727910 GTCCCAAAATAAGTGTCTTAACCTTAG 58.272 37.037 0.00 0.00 0.00 2.18
2862 3262 8.442374 TCCCAAAATAAGTGTCTTAACCTTAGT 58.558 33.333 0.00 0.00 0.00 2.24
2863 3263 9.729281 CCCAAAATAAGTGTCTTAACCTTAGTA 57.271 33.333 0.00 0.00 0.00 1.82
2871 3271 8.658499 AGTGTCTTAACCTTAGTACAACTTTG 57.342 34.615 0.00 0.00 0.00 2.77
2872 3272 8.262933 AGTGTCTTAACCTTAGTACAACTTTGT 58.737 33.333 0.00 0.00 44.86 2.83
2873 3273 9.533253 GTGTCTTAACCTTAGTACAACTTTGTA 57.467 33.333 0.00 0.00 42.35 2.41
2898 3298 8.461249 ACTAGAGTTAGTACAAAGTTGAGACA 57.539 34.615 0.00 0.00 38.35 3.41
2899 3299 8.351461 ACTAGAGTTAGTACAAAGTTGAGACAC 58.649 37.037 0.00 0.00 38.35 3.67
2900 3300 7.349412 AGAGTTAGTACAAAGTTGAGACACT 57.651 36.000 0.00 0.00 0.00 3.55
2901 3301 7.783042 AGAGTTAGTACAAAGTTGAGACACTT 58.217 34.615 0.00 0.00 38.74 3.16
2902 3302 8.910944 AGAGTTAGTACAAAGTTGAGACACTTA 58.089 33.333 0.00 0.00 35.87 2.24
2903 3303 9.694137 GAGTTAGTACAAAGTTGAGACACTTAT 57.306 33.333 0.00 0.00 35.87 1.73
2908 3308 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
2909 3309 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
2910 3310 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
2911 3311 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
2912 3312 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
2913 3313 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2914 3314 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2915 3315 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2916 3316 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2917 3317 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2918 3318 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2919 3319 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2920 3320 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2949 3349 0.387202 CAGGGGATGTCTGTAGAGCG 59.613 60.000 0.00 0.00 0.00 5.03
2951 3351 0.755698 GGGGATGTCTGTAGAGCGGA 60.756 60.000 0.00 0.00 0.00 5.54
2952 3352 1.112113 GGGATGTCTGTAGAGCGGAA 58.888 55.000 0.00 0.00 33.65 4.30
2954 3354 2.025155 GGATGTCTGTAGAGCGGAAGA 58.975 52.381 0.00 0.00 33.65 2.87
2955 3355 2.034053 GGATGTCTGTAGAGCGGAAGAG 59.966 54.545 0.00 0.00 33.65 2.85
2956 3356 0.811915 TGTCTGTAGAGCGGAAGAGC 59.188 55.000 0.00 0.00 33.65 4.09
2957 3357 0.248296 GTCTGTAGAGCGGAAGAGCG 60.248 60.000 0.00 0.00 43.00 5.03
2958 3358 1.064946 CTGTAGAGCGGAAGAGCGG 59.935 63.158 0.00 0.00 43.00 5.52
2959 3359 1.377366 CTGTAGAGCGGAAGAGCGGA 61.377 60.000 0.00 0.00 43.00 5.54
2960 3360 0.963856 TGTAGAGCGGAAGAGCGGAA 60.964 55.000 0.00 0.00 43.00 4.30
2961 3361 0.525882 GTAGAGCGGAAGAGCGGAAC 60.526 60.000 0.00 0.00 43.00 3.62
2962 3362 1.664321 TAGAGCGGAAGAGCGGAACC 61.664 60.000 0.00 0.00 43.00 3.62
2963 3363 4.436998 AGCGGAAGAGCGGAACCG 62.437 66.667 9.00 9.00 46.74 4.44
2965 3365 3.755628 CGGAAGAGCGGAACCGGA 61.756 66.667 9.46 0.00 41.41 5.14
2966 3366 2.901042 GGAAGAGCGGAACCGGAT 59.099 61.111 9.46 0.00 40.19 4.18
2967 3367 1.221021 GGAAGAGCGGAACCGGATT 59.779 57.895 9.46 0.00 40.19 3.01
2968 3368 0.810426 GGAAGAGCGGAACCGGATTC 60.810 60.000 9.46 8.43 40.19 2.52
2969 3369 0.175989 GAAGAGCGGAACCGGATTCT 59.824 55.000 9.46 3.27 40.19 2.40
2970 3370 0.175989 AAGAGCGGAACCGGATTCTC 59.824 55.000 9.46 11.82 40.19 2.87
2971 3371 0.684805 AGAGCGGAACCGGATTCTCT 60.685 55.000 9.46 13.68 40.19 3.10
2972 3372 1.030457 GAGCGGAACCGGATTCTCTA 58.970 55.000 9.46 0.00 40.19 2.43
2973 3373 1.407979 GAGCGGAACCGGATTCTCTAA 59.592 52.381 9.46 0.00 40.19 2.10
2974 3374 1.136500 AGCGGAACCGGATTCTCTAAC 59.864 52.381 9.46 0.00 40.19 2.34
2975 3375 1.134907 GCGGAACCGGATTCTCTAACA 60.135 52.381 9.46 0.00 40.19 2.41
2976 3376 2.483188 GCGGAACCGGATTCTCTAACAT 60.483 50.000 9.46 0.00 40.19 2.71
2977 3377 3.793559 CGGAACCGGATTCTCTAACATT 58.206 45.455 9.46 0.00 37.48 2.71
2978 3378 3.555956 CGGAACCGGATTCTCTAACATTG 59.444 47.826 9.46 0.00 37.48 2.82
2979 3379 4.514401 GGAACCGGATTCTCTAACATTGT 58.486 43.478 9.46 0.00 37.48 2.71
2980 3380 4.332819 GGAACCGGATTCTCTAACATTGTG 59.667 45.833 9.46 0.00 37.48 3.33
2981 3381 4.819105 ACCGGATTCTCTAACATTGTGA 57.181 40.909 9.46 0.00 0.00 3.58
2982 3382 5.160607 ACCGGATTCTCTAACATTGTGAA 57.839 39.130 9.46 0.00 0.00 3.18
2983 3383 5.178797 ACCGGATTCTCTAACATTGTGAAG 58.821 41.667 9.46 0.00 0.00 3.02
2984 3384 4.572389 CCGGATTCTCTAACATTGTGAAGG 59.428 45.833 0.00 0.00 0.00 3.46
2985 3385 5.419542 CGGATTCTCTAACATTGTGAAGGA 58.580 41.667 0.00 0.00 0.00 3.36
2986 3386 5.874810 CGGATTCTCTAACATTGTGAAGGAA 59.125 40.000 0.00 0.00 0.00 3.36
2987 3387 6.371548 CGGATTCTCTAACATTGTGAAGGAAA 59.628 38.462 0.00 0.00 0.00 3.13
2988 3388 7.413438 CGGATTCTCTAACATTGTGAAGGAAAG 60.413 40.741 0.00 0.00 0.00 2.62
2989 3389 7.391833 GGATTCTCTAACATTGTGAAGGAAAGT 59.608 37.037 0.00 0.00 0.00 2.66
2990 3390 7.730364 TTCTCTAACATTGTGAAGGAAAGTC 57.270 36.000 0.00 0.00 0.00 3.01
2991 3391 6.826668 TCTCTAACATTGTGAAGGAAAGTCA 58.173 36.000 0.00 0.00 0.00 3.41
2992 3392 7.453393 TCTCTAACATTGTGAAGGAAAGTCAT 58.547 34.615 0.00 0.00 0.00 3.06
2993 3393 7.388776 TCTCTAACATTGTGAAGGAAAGTCATG 59.611 37.037 0.00 0.00 0.00 3.07
2994 3394 5.458041 AACATTGTGAAGGAAAGTCATGG 57.542 39.130 0.00 0.00 0.00 3.66
2995 3395 4.473444 ACATTGTGAAGGAAAGTCATGGT 58.527 39.130 0.00 0.00 0.00 3.55
2996 3396 4.279169 ACATTGTGAAGGAAAGTCATGGTG 59.721 41.667 0.00 0.00 0.00 4.17
2997 3397 2.229792 TGTGAAGGAAAGTCATGGTGC 58.770 47.619 0.00 0.00 0.00 5.01
2998 3398 2.158623 TGTGAAGGAAAGTCATGGTGCT 60.159 45.455 0.00 0.00 0.00 4.40
2999 3399 3.072330 TGTGAAGGAAAGTCATGGTGCTA 59.928 43.478 0.00 0.00 0.00 3.49
3000 3400 3.437049 GTGAAGGAAAGTCATGGTGCTAC 59.563 47.826 0.00 0.00 0.00 3.58
3001 3401 3.072330 TGAAGGAAAGTCATGGTGCTACA 59.928 43.478 0.00 0.00 0.00 2.74
3002 3402 3.340814 AGGAAAGTCATGGTGCTACAG 57.659 47.619 0.00 0.00 0.00 2.74
3003 3403 2.639839 AGGAAAGTCATGGTGCTACAGT 59.360 45.455 0.00 0.00 0.00 3.55
3004 3404 2.744202 GGAAAGTCATGGTGCTACAGTG 59.256 50.000 0.00 0.00 0.00 3.66
3005 3405 3.403038 GAAAGTCATGGTGCTACAGTGT 58.597 45.455 0.00 0.00 0.00 3.55
3006 3406 3.492102 AAGTCATGGTGCTACAGTGTT 57.508 42.857 0.00 0.00 0.00 3.32
3007 3407 3.492102 AGTCATGGTGCTACAGTGTTT 57.508 42.857 0.00 0.00 0.00 2.83
3008 3408 3.141398 AGTCATGGTGCTACAGTGTTTG 58.859 45.455 0.00 0.00 0.00 2.93
3009 3409 2.878406 GTCATGGTGCTACAGTGTTTGT 59.122 45.455 0.00 0.00 43.96 2.83
3010 3410 3.058914 GTCATGGTGCTACAGTGTTTGTC 60.059 47.826 0.00 0.00 41.29 3.18
3011 3411 3.141398 CATGGTGCTACAGTGTTTGTCT 58.859 45.455 0.00 0.00 41.29 3.41
3012 3412 4.039852 TCATGGTGCTACAGTGTTTGTCTA 59.960 41.667 0.00 0.00 41.29 2.59
3013 3413 3.990092 TGGTGCTACAGTGTTTGTCTAG 58.010 45.455 0.00 0.00 41.29 2.43
3014 3414 3.386726 TGGTGCTACAGTGTTTGTCTAGT 59.613 43.478 0.00 0.00 41.29 2.57
3015 3415 3.741344 GGTGCTACAGTGTTTGTCTAGTG 59.259 47.826 0.00 0.00 41.29 2.74
3016 3416 4.369182 GTGCTACAGTGTTTGTCTAGTGT 58.631 43.478 0.00 0.00 41.29 3.55
3017 3417 5.508489 GGTGCTACAGTGTTTGTCTAGTGTA 60.508 44.000 0.00 0.00 41.29 2.90
3018 3418 5.981315 GTGCTACAGTGTTTGTCTAGTGTAA 59.019 40.000 0.00 0.00 41.29 2.41
3019 3419 6.477688 GTGCTACAGTGTTTGTCTAGTGTAAA 59.522 38.462 0.00 0.00 41.29 2.01
3020 3420 7.010738 GTGCTACAGTGTTTGTCTAGTGTAAAA 59.989 37.037 0.00 0.00 41.29 1.52
3021 3421 7.713507 TGCTACAGTGTTTGTCTAGTGTAAAAT 59.286 33.333 0.00 0.00 41.29 1.82
3022 3422 8.009974 GCTACAGTGTTTGTCTAGTGTAAAATG 58.990 37.037 0.00 0.00 41.29 2.32
3023 3423 9.256477 CTACAGTGTTTGTCTAGTGTAAAATGA 57.744 33.333 0.00 0.00 41.29 2.57
3024 3424 8.500753 ACAGTGTTTGTCTAGTGTAAAATGAA 57.499 30.769 0.00 0.00 33.87 2.57
3025 3425 8.612619 ACAGTGTTTGTCTAGTGTAAAATGAAG 58.387 33.333 0.00 0.00 33.87 3.02
3026 3426 8.826710 CAGTGTTTGTCTAGTGTAAAATGAAGA 58.173 33.333 0.00 0.00 0.00 2.87
3027 3427 9.391006 AGTGTTTGTCTAGTGTAAAATGAAGAA 57.609 29.630 0.00 0.00 0.00 2.52
3028 3428 9.651718 GTGTTTGTCTAGTGTAAAATGAAGAAG 57.348 33.333 0.00 0.00 0.00 2.85
3029 3429 9.607988 TGTTTGTCTAGTGTAAAATGAAGAAGA 57.392 29.630 0.00 0.00 0.00 2.87
3039 3439 9.678941 GTGTAAAATGAAGAAGAAAAGTTAGGG 57.321 33.333 0.00 0.00 0.00 3.53
3040 3440 9.635404 TGTAAAATGAAGAAGAAAAGTTAGGGA 57.365 29.630 0.00 0.00 0.00 4.20
3041 3441 9.894783 GTAAAATGAAGAAGAAAAGTTAGGGAC 57.105 33.333 0.00 0.00 0.00 4.46
3042 3442 8.768501 AAAATGAAGAAGAAAAGTTAGGGACT 57.231 30.769 0.00 0.00 46.37 3.85
3043 3443 7.751768 AATGAAGAAGAAAAGTTAGGGACTG 57.248 36.000 0.00 0.00 41.52 3.51
3044 3444 6.248569 TGAAGAAGAAAAGTTAGGGACTGT 57.751 37.500 0.00 0.00 41.52 3.55
3045 3445 6.659824 TGAAGAAGAAAAGTTAGGGACTGTT 58.340 36.000 0.00 0.00 41.52 3.16
3046 3446 7.798071 TGAAGAAGAAAAGTTAGGGACTGTTA 58.202 34.615 0.00 0.00 41.52 2.41
3047 3447 7.931948 TGAAGAAGAAAAGTTAGGGACTGTTAG 59.068 37.037 0.00 0.00 41.52 2.34
3048 3448 7.376335 AGAAGAAAAGTTAGGGACTGTTAGT 57.624 36.000 0.00 0.00 41.52 2.24
3049 3449 8.488308 AGAAGAAAAGTTAGGGACTGTTAGTA 57.512 34.615 0.00 0.00 41.52 1.82
3050 3450 8.586744 AGAAGAAAAGTTAGGGACTGTTAGTAG 58.413 37.037 0.00 0.00 41.52 2.57
3051 3451 7.242322 AGAAAAGTTAGGGACTGTTAGTAGG 57.758 40.000 0.00 0.00 41.52 3.18
3052 3452 6.786461 AGAAAAGTTAGGGACTGTTAGTAGGT 59.214 38.462 0.00 0.00 41.52 3.08
3053 3453 7.952368 AGAAAAGTTAGGGACTGTTAGTAGGTA 59.048 37.037 0.00 0.00 41.52 3.08
3054 3454 7.715266 AAAGTTAGGGACTGTTAGTAGGTAG 57.285 40.000 0.00 0.00 41.52 3.18
3055 3455 5.764432 AGTTAGGGACTGTTAGTAGGTAGG 58.236 45.833 0.00 0.00 41.52 3.18
3056 3456 5.254972 AGTTAGGGACTGTTAGTAGGTAGGT 59.745 44.000 0.00 0.00 41.52 3.08
3057 3457 4.689014 AGGGACTGTTAGTAGGTAGGTT 57.311 45.455 0.00 0.00 37.18 3.50
3058 3458 4.351127 AGGGACTGTTAGTAGGTAGGTTG 58.649 47.826 0.00 0.00 37.18 3.77
3059 3459 4.092279 GGGACTGTTAGTAGGTAGGTTGT 58.908 47.826 0.00 0.00 0.00 3.32
3060 3460 4.529769 GGGACTGTTAGTAGGTAGGTTGTT 59.470 45.833 0.00 0.00 0.00 2.83
3061 3461 5.012458 GGGACTGTTAGTAGGTAGGTTGTTT 59.988 44.000 0.00 0.00 0.00 2.83
3062 3462 6.211384 GGGACTGTTAGTAGGTAGGTTGTTTA 59.789 42.308 0.00 0.00 0.00 2.01
3063 3463 7.093354 GGACTGTTAGTAGGTAGGTTGTTTAC 58.907 42.308 0.00 0.00 0.00 2.01
3064 3464 7.039434 GGACTGTTAGTAGGTAGGTTGTTTACT 60.039 40.741 0.00 0.00 0.00 2.24
3065 3465 7.664758 ACTGTTAGTAGGTAGGTTGTTTACTG 58.335 38.462 0.00 0.00 0.00 2.74
3066 3466 7.288621 ACTGTTAGTAGGTAGGTTGTTTACTGT 59.711 37.037 0.00 0.00 0.00 3.55
3067 3467 8.021898 TGTTAGTAGGTAGGTTGTTTACTGTT 57.978 34.615 0.00 0.00 0.00 3.16
3068 3468 7.927629 TGTTAGTAGGTAGGTTGTTTACTGTTG 59.072 37.037 0.00 0.00 0.00 3.33
3069 3469 5.861727 AGTAGGTAGGTTGTTTACTGTTGG 58.138 41.667 0.00 0.00 0.00 3.77
3070 3470 4.783560 AGGTAGGTTGTTTACTGTTGGT 57.216 40.909 0.00 0.00 0.00 3.67
3071 3471 5.892524 AGGTAGGTTGTTTACTGTTGGTA 57.107 39.130 0.00 0.00 0.00 3.25
3072 3472 6.443995 AGGTAGGTTGTTTACTGTTGGTAT 57.556 37.500 0.00 0.00 0.00 2.73
3073 3473 6.844829 AGGTAGGTTGTTTACTGTTGGTATT 58.155 36.000 0.00 0.00 0.00 1.89
3074 3474 7.292319 AGGTAGGTTGTTTACTGTTGGTATTT 58.708 34.615 0.00 0.00 0.00 1.40
3075 3475 8.439172 AGGTAGGTTGTTTACTGTTGGTATTTA 58.561 33.333 0.00 0.00 0.00 1.40
3076 3476 8.506437 GGTAGGTTGTTTACTGTTGGTATTTAC 58.494 37.037 0.00 0.00 0.00 2.01
3077 3477 9.276590 GTAGGTTGTTTACTGTTGGTATTTACT 57.723 33.333 0.00 0.00 0.00 2.24
3078 3478 8.161699 AGGTTGTTTACTGTTGGTATTTACTG 57.838 34.615 0.00 0.00 0.00 2.74
3079 3479 7.776500 AGGTTGTTTACTGTTGGTATTTACTGT 59.224 33.333 0.00 0.00 0.00 3.55
3080 3480 9.054922 GGTTGTTTACTGTTGGTATTTACTGTA 57.945 33.333 0.00 0.00 0.00 2.74
3124 3524 9.921637 ATTAATTTTATGTCACCGTCAATTTGT 57.078 25.926 0.00 0.00 0.00 2.83
3125 3525 9.751542 TTAATTTTATGTCACCGTCAATTTGTT 57.248 25.926 0.00 0.00 0.00 2.83
3126 3526 8.655651 AATTTTATGTCACCGTCAATTTGTTT 57.344 26.923 0.00 0.00 0.00 2.83
3127 3527 7.456684 TTTTATGTCACCGTCAATTTGTTTG 57.543 32.000 0.00 0.00 36.61 2.93
3128 3528 4.647424 ATGTCACCGTCAATTTGTTTGT 57.353 36.364 0.00 0.00 36.65 2.83
3129 3529 5.759506 ATGTCACCGTCAATTTGTTTGTA 57.240 34.783 0.00 0.00 36.65 2.41
3130 3530 5.759506 TGTCACCGTCAATTTGTTTGTAT 57.240 34.783 0.00 0.00 36.65 2.29
3131 3531 5.515184 TGTCACCGTCAATTTGTTTGTATG 58.485 37.500 0.00 0.00 36.65 2.39
3132 3532 5.066634 TGTCACCGTCAATTTGTTTGTATGT 59.933 36.000 0.00 0.00 36.65 2.29
3133 3533 6.260271 TGTCACCGTCAATTTGTTTGTATGTA 59.740 34.615 0.00 0.00 36.65 2.29
3134 3534 7.133513 GTCACCGTCAATTTGTTTGTATGTAA 58.866 34.615 0.00 0.00 36.65 2.41
3135 3535 7.806014 GTCACCGTCAATTTGTTTGTATGTAAT 59.194 33.333 0.00 0.00 36.65 1.89
3136 3536 8.353684 TCACCGTCAATTTGTTTGTATGTAATT 58.646 29.630 0.00 0.00 36.65 1.40
3137 3537 9.613957 CACCGTCAATTTGTTTGTATGTAATTA 57.386 29.630 0.00 0.00 36.65 1.40
3138 3538 9.615295 ACCGTCAATTTGTTTGTATGTAATTAC 57.385 29.630 8.75 8.75 36.65 1.89
3139 3539 9.834628 CCGTCAATTTGTTTGTATGTAATTACT 57.165 29.630 16.33 5.22 36.65 2.24
3225 3625 9.717942 CATATGGATAGAAAGAAGGAAGTTAGG 57.282 37.037 0.00 0.00 0.00 2.69
3226 3626 6.561519 TGGATAGAAAGAAGGAAGTTAGGG 57.438 41.667 0.00 0.00 0.00 3.53
3227 3627 6.030082 TGGATAGAAAGAAGGAAGTTAGGGT 58.970 40.000 0.00 0.00 0.00 4.34
3228 3628 7.194050 TGGATAGAAAGAAGGAAGTTAGGGTA 58.806 38.462 0.00 0.00 0.00 3.69
3229 3629 7.849904 TGGATAGAAAGAAGGAAGTTAGGGTAT 59.150 37.037 0.00 0.00 0.00 2.73
3230 3630 8.715842 GGATAGAAAGAAGGAAGTTAGGGTATT 58.284 37.037 0.00 0.00 0.00 1.89
3231 3631 9.549078 GATAGAAAGAAGGAAGTTAGGGTATTG 57.451 37.037 0.00 0.00 0.00 1.90
3232 3632 7.331089 AGAAAGAAGGAAGTTAGGGTATTGT 57.669 36.000 0.00 0.00 0.00 2.71
3233 3633 8.445361 AGAAAGAAGGAAGTTAGGGTATTGTA 57.555 34.615 0.00 0.00 0.00 2.41
3234 3634 8.541234 AGAAAGAAGGAAGTTAGGGTATTGTAG 58.459 37.037 0.00 0.00 0.00 2.74
3235 3635 6.236558 AGAAGGAAGTTAGGGTATTGTAGC 57.763 41.667 0.00 0.00 0.00 3.58
3236 3636 5.965091 AGAAGGAAGTTAGGGTATTGTAGCT 59.035 40.000 0.00 0.00 0.00 3.32
3237 3637 6.444171 AGAAGGAAGTTAGGGTATTGTAGCTT 59.556 38.462 0.00 0.00 0.00 3.74
3238 3638 6.236558 AGGAAGTTAGGGTATTGTAGCTTC 57.763 41.667 0.00 0.00 36.36 3.86
3239 3639 5.965091 AGGAAGTTAGGGTATTGTAGCTTCT 59.035 40.000 0.00 0.00 36.94 2.85
3240 3640 6.098552 AGGAAGTTAGGGTATTGTAGCTTCTC 59.901 42.308 0.00 0.00 36.94 2.87
3241 3641 6.098552 GGAAGTTAGGGTATTGTAGCTTCTCT 59.901 42.308 0.00 0.00 36.94 3.10
3242 3642 7.287235 GGAAGTTAGGGTATTGTAGCTTCTCTA 59.713 40.741 0.00 0.00 36.94 2.43
3243 3643 8.605325 AAGTTAGGGTATTGTAGCTTCTCTAA 57.395 34.615 0.00 0.00 0.00 2.10
3244 3644 8.009622 AGTTAGGGTATTGTAGCTTCTCTAAC 57.990 38.462 0.00 0.00 36.20 2.34
3245 3645 7.840210 AGTTAGGGTATTGTAGCTTCTCTAACT 59.160 37.037 9.15 9.15 39.32 2.24
3246 3646 8.476447 GTTAGGGTATTGTAGCTTCTCTAACTT 58.524 37.037 0.00 0.00 34.36 2.66
3247 3647 7.497773 AGGGTATTGTAGCTTCTCTAACTTT 57.502 36.000 0.00 0.00 0.00 2.66
3248 3648 7.557724 AGGGTATTGTAGCTTCTCTAACTTTC 58.442 38.462 0.00 0.00 0.00 2.62
3249 3649 6.762187 GGGTATTGTAGCTTCTCTAACTTTCC 59.238 42.308 0.00 0.00 0.00 3.13
3250 3650 7.364851 GGGTATTGTAGCTTCTCTAACTTTCCT 60.365 40.741 0.00 0.00 0.00 3.36
3251 3651 8.041919 GGTATTGTAGCTTCTCTAACTTTCCTT 58.958 37.037 0.00 0.00 0.00 3.36
3252 3652 9.089601 GTATTGTAGCTTCTCTAACTTTCCTTC 57.910 37.037 0.00 0.00 0.00 3.46
3253 3653 6.919775 TGTAGCTTCTCTAACTTTCCTTCT 57.080 37.500 0.00 0.00 0.00 2.85
3254 3654 6.926313 TGTAGCTTCTCTAACTTTCCTTCTC 58.074 40.000 0.00 0.00 0.00 2.87
3255 3655 6.493802 TGTAGCTTCTCTAACTTTCCTTCTCA 59.506 38.462 0.00 0.00 0.00 3.27
3256 3656 6.426646 AGCTTCTCTAACTTTCCTTCTCAA 57.573 37.500 0.00 0.00 0.00 3.02
3257 3657 7.014988 AGCTTCTCTAACTTTCCTTCTCAAT 57.985 36.000 0.00 0.00 0.00 2.57
3258 3658 6.878389 AGCTTCTCTAACTTTCCTTCTCAATG 59.122 38.462 0.00 0.00 0.00 2.82
3259 3659 6.652900 GCTTCTCTAACTTTCCTTCTCAATGT 59.347 38.462 0.00 0.00 0.00 2.71
3260 3660 7.174080 GCTTCTCTAACTTTCCTTCTCAATGTT 59.826 37.037 0.00 0.00 0.00 2.71
3261 3661 9.712305 CTTCTCTAACTTTCCTTCTCAATGTTA 57.288 33.333 0.00 0.00 0.00 2.41
3262 3662 9.712305 TTCTCTAACTTTCCTTCTCAATGTTAG 57.288 33.333 0.00 0.00 40.02 2.34
3263 3663 9.090103 TCTCTAACTTTCCTTCTCAATGTTAGA 57.910 33.333 14.95 14.95 42.45 2.10
3265 3665 8.314751 TCTAACTTTCCTTCTCAATGTTAGAGG 58.685 37.037 13.06 0.00 41.22 3.69
3266 3666 6.688073 ACTTTCCTTCTCAATGTTAGAGGA 57.312 37.500 0.00 0.00 33.92 3.71
3267 3667 7.264294 ACTTTCCTTCTCAATGTTAGAGGAT 57.736 36.000 0.00 0.00 33.92 3.24
3268 3668 7.334858 ACTTTCCTTCTCAATGTTAGAGGATC 58.665 38.462 0.00 0.00 33.92 3.36
3269 3669 5.878406 TCCTTCTCAATGTTAGAGGATCC 57.122 43.478 2.48 2.48 33.66 3.36
3270 3670 4.342378 TCCTTCTCAATGTTAGAGGATCCG 59.658 45.833 5.98 0.00 33.66 4.18
3271 3671 4.502259 CCTTCTCAATGTTAGAGGATCCGG 60.502 50.000 5.98 0.00 33.66 5.14
3272 3672 3.643237 TCTCAATGTTAGAGGATCCGGT 58.357 45.455 5.98 0.00 33.66 5.28
3302 3702 7.090953 TGTTTTTCGGTTATTGTTGAGAGTT 57.909 32.000 0.00 0.00 0.00 3.01
3350 3750 4.503714 ACCTGTAACCATTCATGTAGGG 57.496 45.455 1.02 1.02 0.00 3.53
3374 3774 4.814234 GGCATATCGTGTCAACAAGGATTA 59.186 41.667 4.03 0.00 30.99 1.75
3410 3810 9.000486 GGATTAACTTATTAAGTAGGGTCATGC 58.000 37.037 9.43 0.00 41.91 4.06
3434 3834 7.112779 GCTGGTTATGCTATATTTATCCTGGT 58.887 38.462 0.00 0.00 0.00 4.00
3444 3844 7.618512 GCTATATTTATCCTGGTGGTCCTAGTA 59.381 40.741 0.00 0.00 34.23 1.82
3485 3885 0.764271 TGCATTGGAGACCACTGTCA 59.236 50.000 9.24 5.87 44.33 3.58
3512 3912 3.744238 TTCAGTCTGTTCGTGGATCAA 57.256 42.857 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 3.560902 TTCTCGTGTTGCACAAAACAA 57.439 38.095 4.66 0.00 41.52 2.83
88 92 5.950758 ACCATTAAAAAGTGTGCACGATA 57.049 34.783 13.13 0.00 36.20 2.92
89 93 4.846779 ACCATTAAAAAGTGTGCACGAT 57.153 36.364 13.13 0.00 36.20 3.73
90 94 5.527951 TCTTACCATTAAAAAGTGTGCACGA 59.472 36.000 13.13 0.00 36.20 4.35
92 96 7.995463 TTTCTTACCATTAAAAAGTGTGCAC 57.005 32.000 10.75 10.75 0.00 4.57
158 163 6.074356 GCGTTTCAAAAAGCTATGTGTGAAAT 60.074 34.615 11.46 0.00 39.72 2.17
168 173 3.547214 CGTTCCTGCGTTTCAAAAAGCTA 60.547 43.478 13.18 1.75 42.61 3.32
170 175 1.516864 CGTTCCTGCGTTTCAAAAAGC 59.483 47.619 6.47 6.47 42.50 3.51
185 190 2.048498 GGCGACAATGAAAAACGTTCC 58.952 47.619 0.00 0.00 0.00 3.62
201 206 3.308323 GCTTTCAAAAACAATGTTGGCGA 59.692 39.130 0.00 0.00 0.00 5.54
205 210 9.033481 TCTTGATAGCTTTCAAAAACAATGTTG 57.967 29.630 18.42 5.41 35.31 3.33
259 264 9.186323 CATGAATTTGAAAATGTTAACACGGTA 57.814 29.630 11.22 0.00 0.00 4.02
326 332 9.863845 TGACGTCCTAATTTTCTTTTTCTTTTT 57.136 25.926 14.12 0.00 0.00 1.94
331 337 8.690840 CATGTTGACGTCCTAATTTTCTTTTTC 58.309 33.333 14.12 0.00 0.00 2.29
332 338 8.194769 ACATGTTGACGTCCTAATTTTCTTTTT 58.805 29.630 14.12 0.00 0.00 1.94
337 343 6.236017 TGACATGTTGACGTCCTAATTTTC 57.764 37.500 14.12 2.32 0.00 2.29
338 344 6.429692 TGATGACATGTTGACGTCCTAATTTT 59.570 34.615 14.12 0.00 29.23 1.82
347 354 2.802247 CACACTGATGACATGTTGACGT 59.198 45.455 0.00 0.00 0.00 4.34
349 356 2.485426 CCCACACTGATGACATGTTGAC 59.515 50.000 0.00 0.00 0.00 3.18
352 359 2.639347 TCTCCCACACTGATGACATGTT 59.361 45.455 0.00 0.00 0.00 2.71
354 361 2.625737 GTCTCCCACACTGATGACATG 58.374 52.381 0.00 0.00 0.00 3.21
355 362 1.556911 GGTCTCCCACACTGATGACAT 59.443 52.381 0.00 0.00 0.00 3.06
397 410 4.451150 TGGAAGGCAGCCGCGTAG 62.451 66.667 5.55 0.00 39.92 3.51
398 411 4.752879 GTGGAAGGCAGCCGCGTA 62.753 66.667 5.55 0.00 39.92 4.42
401 414 3.741476 CAAGTGGAAGGCAGCCGC 61.741 66.667 5.55 1.81 36.17 6.53
402 415 2.803155 TAGCAAGTGGAAGGCAGCCG 62.803 60.000 5.55 0.00 0.00 5.52
403 416 0.394899 ATAGCAAGTGGAAGGCAGCC 60.395 55.000 1.84 1.84 0.00 4.85
404 417 2.332063 TATAGCAAGTGGAAGGCAGC 57.668 50.000 0.00 0.00 0.00 5.25
405 418 2.615912 GCTTATAGCAAGTGGAAGGCAG 59.384 50.000 0.00 0.00 41.89 4.85
406 419 2.643551 GCTTATAGCAAGTGGAAGGCA 58.356 47.619 0.00 0.00 41.89 4.75
407 420 1.599542 CGCTTATAGCAAGTGGAAGGC 59.400 52.381 0.00 0.00 42.58 4.35
408 421 3.126831 CTCGCTTATAGCAAGTGGAAGG 58.873 50.000 0.00 0.00 42.58 3.46
409 422 3.126831 CCTCGCTTATAGCAAGTGGAAG 58.873 50.000 0.00 0.00 42.58 3.46
410 423 2.741878 GCCTCGCTTATAGCAAGTGGAA 60.742 50.000 0.00 0.00 42.58 3.53
411 424 1.202533 GCCTCGCTTATAGCAAGTGGA 60.203 52.381 0.00 0.00 42.58 4.02
412 425 1.221414 GCCTCGCTTATAGCAAGTGG 58.779 55.000 0.00 0.00 42.58 4.00
413 426 1.939974 TGCCTCGCTTATAGCAAGTG 58.060 50.000 0.00 0.00 42.58 3.16
414 427 2.918712 ATGCCTCGCTTATAGCAAGT 57.081 45.000 0.00 0.00 42.58 3.16
415 428 3.257393 CCTATGCCTCGCTTATAGCAAG 58.743 50.000 0.00 0.00 42.58 4.01
416 429 2.612972 GCCTATGCCTCGCTTATAGCAA 60.613 50.000 0.00 0.00 42.58 3.91
417 430 1.066858 GCCTATGCCTCGCTTATAGCA 60.067 52.381 0.00 0.00 42.58 3.49
418 431 1.646189 GCCTATGCCTCGCTTATAGC 58.354 55.000 0.00 0.00 38.02 2.97
419 432 1.914634 CGCCTATGCCTCGCTTATAG 58.085 55.000 0.00 0.00 0.00 1.31
455 468 5.967088 TCTTCCTGAAGAAATACTCCTTCG 58.033 41.667 7.12 0.00 43.79 3.79
457 470 5.338789 GCCTCTTCCTGAAGAAATACTCCTT 60.339 44.000 10.57 0.00 45.75 3.36
460 473 5.091261 TGCCTCTTCCTGAAGAAATACTC 57.909 43.478 10.57 0.00 45.75 2.59
479 492 1.530183 GGCCATGAGGAGGATTGCC 60.530 63.158 0.00 0.00 36.89 4.52
480 493 1.530183 GGGCCATGAGGAGGATTGC 60.530 63.158 4.39 0.00 36.89 3.56
481 494 0.481567 ATGGGCCATGAGGAGGATTG 59.518 55.000 20.49 0.00 36.89 2.67
482 495 0.481567 CATGGGCCATGAGGAGGATT 59.518 55.000 37.69 1.16 43.81 3.01
483 496 0.700269 ACATGGGCCATGAGGAGGAT 60.700 55.000 44.42 23.19 43.81 3.24
494 514 4.360405 AACGGGGTCACATGGGCC 62.360 66.667 0.00 0.00 0.00 5.80
514 534 0.550147 AGGTGTCATTAGGGCCAGGT 60.550 55.000 6.18 0.00 0.00 4.00
515 535 0.107017 CAGGTGTCATTAGGGCCAGG 60.107 60.000 6.18 0.00 0.00 4.45
516 536 0.911769 TCAGGTGTCATTAGGGCCAG 59.088 55.000 6.18 0.00 0.00 4.85
517 537 0.911769 CTCAGGTGTCATTAGGGCCA 59.088 55.000 6.18 0.00 0.00 5.36
518 538 0.181350 CCTCAGGTGTCATTAGGGCC 59.819 60.000 0.00 0.00 0.00 5.80
519 539 0.912486 ACCTCAGGTGTCATTAGGGC 59.088 55.000 0.00 0.00 32.98 5.19
527 547 7.556844 TCTATTTTTCTCATACCTCAGGTGTC 58.443 38.462 6.61 0.00 36.19 3.67
532 552 9.727627 GCATTTTCTATTTTTCTCATACCTCAG 57.272 33.333 0.00 0.00 0.00 3.35
571 594 3.017442 TCTCGGACACTCTTATGGTCTG 58.983 50.000 0.00 0.00 38.88 3.51
580 603 4.866508 TTGTAACATTCTCGGACACTCT 57.133 40.909 0.00 0.00 0.00 3.24
685 708 2.022934 GACGTAAGATCTCGAACCCCT 58.977 52.381 10.50 0.00 43.62 4.79
687 710 4.889832 TTAGACGTAAGATCTCGAACCC 57.110 45.455 10.50 0.00 43.62 4.11
688 711 6.493116 TCATTTAGACGTAAGATCTCGAACC 58.507 40.000 10.50 0.67 43.62 3.62
692 715 7.577107 TGATCTCATTTAGACGTAAGATCTCG 58.423 38.462 0.00 0.00 39.73 4.04
711 734 3.759418 TCAACATTCGTCGTCTGATCTC 58.241 45.455 0.00 0.00 0.00 2.75
742 765 8.293867 CCTTCTCACGTTTGACCAAATTTATAA 58.706 33.333 0.00 0.00 32.36 0.98
743 766 7.446013 ACCTTCTCACGTTTGACCAAATTTATA 59.554 33.333 0.00 0.00 32.36 0.98
767 790 0.242825 GGCTTGCCTTCCGTTAAACC 59.757 55.000 4.11 0.00 0.00 3.27
802 825 8.306313 TGACACTATCACTATGGTAACTTCAT 57.694 34.615 0.00 0.00 29.99 2.57
880 904 5.601662 GATGAAATCTCCACCGTCTATTGA 58.398 41.667 0.00 0.00 41.17 2.57
924 948 1.809567 GCTTTTGCTGGACAGGGTGG 61.810 60.000 1.01 0.00 43.35 4.61
925 949 1.662044 GCTTTTGCTGGACAGGGTG 59.338 57.895 1.01 0.00 43.35 4.61
974 1007 3.451402 AAACCCTAATTCTTCCGGCTT 57.549 42.857 0.00 0.00 0.00 4.35
1397 1439 7.254151 GGAGCAAATACAGAAAGACGATTCTAC 60.254 40.741 0.00 0.00 37.56 2.59
1398 1440 6.757010 GGAGCAAATACAGAAAGACGATTCTA 59.243 38.462 0.00 0.00 37.56 2.10
1400 1442 5.582665 AGGAGCAAATACAGAAAGACGATTC 59.417 40.000 0.00 0.00 0.00 2.52
1401 1443 5.352569 CAGGAGCAAATACAGAAAGACGATT 59.647 40.000 0.00 0.00 0.00 3.34
1402 1444 4.872691 CAGGAGCAAATACAGAAAGACGAT 59.127 41.667 0.00 0.00 0.00 3.73
1404 1446 3.372206 CCAGGAGCAAATACAGAAAGACG 59.628 47.826 0.00 0.00 0.00 4.18
1405 1447 4.327680 ACCAGGAGCAAATACAGAAAGAC 58.672 43.478 0.00 0.00 0.00 3.01
1407 1449 5.245531 TGTACCAGGAGCAAATACAGAAAG 58.754 41.667 0.00 0.00 0.00 2.62
1408 1450 5.235850 TGTACCAGGAGCAAATACAGAAA 57.764 39.130 0.00 0.00 0.00 2.52
1425 1632 6.994496 ACTGGTACTTTCTTAACCTTTGTACC 59.006 38.462 11.19 11.19 44.90 3.34
1431 1638 6.683312 AGCTACTGGTACTTTCTTAACCTT 57.317 37.500 0.00 0.00 34.23 3.50
1441 1648 5.071384 AGGTACAAACAAGCTACTGGTACTT 59.929 40.000 12.41 5.49 32.44 2.24
1443 1650 4.891260 AGGTACAAACAAGCTACTGGTAC 58.109 43.478 0.00 0.00 0.00 3.34
1445 1652 4.432980 AAGGTACAAACAAGCTACTGGT 57.567 40.909 0.00 0.00 0.00 4.00
1446 1653 6.653320 TGATTAAGGTACAAACAAGCTACTGG 59.347 38.462 0.00 0.00 0.00 4.00
1451 1658 6.952773 TGTTGATTAAGGTACAAACAAGCT 57.047 33.333 0.00 0.00 0.00 3.74
1455 1662 8.001881 ACAACATGTTGATTAAGGTACAAACA 57.998 30.769 38.30 0.00 42.93 2.83
1480 1687 8.121305 ACAAGTGCAATATCCAATTTGTCTTA 57.879 30.769 0.00 0.00 0.00 2.10
1532 1747 2.949177 AAGGTGACAGTGTGGCATAA 57.051 45.000 0.00 0.00 37.93 1.90
1537 1752 3.997021 GACAGAATAAGGTGACAGTGTGG 59.003 47.826 0.00 0.00 0.00 4.17
1605 1820 0.249489 GATCAGGGATCGAACACGGG 60.249 60.000 0.00 0.00 29.12 5.28
1625 1841 5.316987 AGGGAGTCCACAACTAAAATTGAG 58.683 41.667 12.30 0.00 38.74 3.02
1675 2051 5.172687 TGATTACCAGTCTGCAATTGGTA 57.827 39.130 15.81 15.81 45.55 3.25
1795 2173 8.931385 AAACGTCTTCAGTTTACTTTGTAGTA 57.069 30.769 0.00 0.00 39.70 1.82
1826 2204 6.909550 AGCCAACTAATTACATGTTCCAAA 57.090 33.333 2.30 0.00 0.00 3.28
1836 2214 7.592439 ACGAACTAAGAAGCCAACTAATTAC 57.408 36.000 0.00 0.00 0.00 1.89
1839 2217 8.501580 GTTAAACGAACTAAGAAGCCAACTAAT 58.498 33.333 0.00 0.00 34.96 1.73
1840 2218 7.854534 GTTAAACGAACTAAGAAGCCAACTAA 58.145 34.615 0.00 0.00 34.96 2.24
1865 2243 9.803315 TGACATAATACAGTGAAGTAGCTTTAG 57.197 33.333 0.00 0.00 0.00 1.85
1874 2252 9.083080 TGACGTAAATGACATAATACAGTGAAG 57.917 33.333 0.00 0.00 0.00 3.02
1894 2272 8.611757 CATGGTAAATTCATTTCATCTGACGTA 58.388 33.333 0.00 0.00 0.00 3.57
1896 2274 7.696755 TCATGGTAAATTCATTTCATCTGACG 58.303 34.615 0.00 0.00 0.00 4.35
1975 2353 8.026341 ACGAACTAAAAAGCCAACTAGTTATC 57.974 34.615 8.04 3.04 35.31 1.75
1983 2361 5.573669 TGTTCAAACGAACTAAAAAGCCAAC 59.426 36.000 6.86 0.00 42.76 3.77
2023 2403 9.661187 CATCTGACTGAAATGACATAATAAAGC 57.339 33.333 0.00 0.00 0.00 3.51
2101 2481 8.585018 TGAGTAAGACACAAATCAATAGTCAGA 58.415 33.333 0.00 0.00 0.00 3.27
2105 2485 9.155975 GACATGAGTAAGACACAAATCAATAGT 57.844 33.333 0.00 0.00 0.00 2.12
2181 2562 3.528532 GACCCTCATAAACCTGTTACCG 58.471 50.000 0.00 0.00 0.00 4.02
2259 2640 1.270199 CCATCAGGCTTCTCAGGATCG 60.270 57.143 0.00 0.00 0.00 3.69
2389 2770 0.525668 CCACGAGAATCTCCGGTTCG 60.526 60.000 0.00 5.59 37.31 3.95
2394 2775 2.263077 CAGAAACCACGAGAATCTCCG 58.737 52.381 4.47 2.86 0.00 4.63
2457 2838 3.949754 GCAGTTCAGATTGATTCATCCCA 59.050 43.478 0.00 0.00 0.00 4.37
2550 2931 6.283694 TCTCACTAGCTCAATAATGCGAAAT 58.716 36.000 0.00 0.00 0.00 2.17
2554 2935 5.693555 TGAATCTCACTAGCTCAATAATGCG 59.306 40.000 0.00 0.00 0.00 4.73
2564 2945 5.482175 ACCTTACAACTGAATCTCACTAGCT 59.518 40.000 0.00 0.00 0.00 3.32
2755 3155 5.597182 AGACAGACAGGTTTACACAACTCTA 59.403 40.000 0.00 0.00 0.00 2.43
2829 3229 3.418047 ACACTTATTTTGGGACGAAGGG 58.582 45.455 0.00 0.00 0.00 3.95
2830 3230 4.324267 AGACACTTATTTTGGGACGAAGG 58.676 43.478 0.00 0.00 0.00 3.46
2831 3231 5.941948 AAGACACTTATTTTGGGACGAAG 57.058 39.130 0.00 0.00 0.00 3.79
2832 3232 6.205270 GGTTAAGACACTTATTTTGGGACGAA 59.795 38.462 0.00 0.00 0.00 3.85
2833 3233 5.702209 GGTTAAGACACTTATTTTGGGACGA 59.298 40.000 0.00 0.00 0.00 4.20
2834 3234 5.704053 AGGTTAAGACACTTATTTTGGGACG 59.296 40.000 0.00 0.00 0.00 4.79
2835 3235 7.520451 AAGGTTAAGACACTTATTTTGGGAC 57.480 36.000 0.00 0.00 0.00 4.46
2836 3236 8.442374 ACTAAGGTTAAGACACTTATTTTGGGA 58.558 33.333 0.00 0.00 0.00 4.37
2837 3237 8.631480 ACTAAGGTTAAGACACTTATTTTGGG 57.369 34.615 0.00 0.00 0.00 4.12
2845 3245 9.106070 CAAAGTTGTACTAAGGTTAAGACACTT 57.894 33.333 0.00 0.00 0.00 3.16
2846 3246 8.262933 ACAAAGTTGTACTAAGGTTAAGACACT 58.737 33.333 0.00 0.00 40.16 3.55
2847 3247 8.429493 ACAAAGTTGTACTAAGGTTAAGACAC 57.571 34.615 0.00 0.00 40.16 3.67
2872 3272 9.565090 TGTCTCAACTTTGTACTAACTCTAGTA 57.435 33.333 0.00 0.00 39.23 1.82
2873 3273 8.351461 GTGTCTCAACTTTGTACTAACTCTAGT 58.649 37.037 0.00 0.00 41.43 2.57
2874 3274 8.569641 AGTGTCTCAACTTTGTACTAACTCTAG 58.430 37.037 0.00 0.00 0.00 2.43
2875 3275 8.461249 AGTGTCTCAACTTTGTACTAACTCTA 57.539 34.615 0.00 0.00 0.00 2.43
2876 3276 7.349412 AGTGTCTCAACTTTGTACTAACTCT 57.651 36.000 0.00 0.00 0.00 3.24
2877 3277 9.694137 ATAAGTGTCTCAACTTTGTACTAACTC 57.306 33.333 0.00 0.00 40.77 3.01
2882 3282 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
2883 3283 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
2884 3284 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
2885 3285 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
2886 3286 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
2887 3287 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
2888 3288 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
2889 3289 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
2890 3290 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2891 3291 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2892 3292 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2893 3293 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2894 3294 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2895 3295 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2896 3296 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2897 3297 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2898 3298 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2899 3299 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2900 3300 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2901 3301 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2902 3302 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2903 3303 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2904 3304 0.906282 GGTACTCCCTCCGTCCCAAA 60.906 60.000 0.00 0.00 0.00 3.28
2905 3305 1.305549 GGTACTCCCTCCGTCCCAA 60.306 63.158 0.00 0.00 0.00 4.12
2906 3306 1.807771 AAGGTACTCCCTCCGTCCCA 61.808 60.000 0.00 0.00 45.47 4.37
2907 3307 0.616964 AAAGGTACTCCCTCCGTCCC 60.617 60.000 0.00 0.00 45.47 4.46
2908 3308 1.273759 AAAAGGTACTCCCTCCGTCC 58.726 55.000 0.00 0.00 45.47 4.79
2909 3309 2.159128 GCTAAAAGGTACTCCCTCCGTC 60.159 54.545 0.00 0.00 45.47 4.79
2910 3310 1.829849 GCTAAAAGGTACTCCCTCCGT 59.170 52.381 0.00 0.00 45.47 4.69
2911 3311 1.829222 TGCTAAAAGGTACTCCCTCCG 59.171 52.381 0.00 0.00 45.47 4.63
2912 3312 2.170817 CCTGCTAAAAGGTACTCCCTCC 59.829 54.545 0.00 0.00 45.47 4.30
2913 3313 2.170817 CCCTGCTAAAAGGTACTCCCTC 59.829 54.545 0.00 0.00 45.47 4.30
2915 3315 1.212195 CCCCTGCTAAAAGGTACTCCC 59.788 57.143 0.00 0.00 38.49 4.30
2916 3316 2.193993 TCCCCTGCTAAAAGGTACTCC 58.806 52.381 0.00 0.00 38.49 3.85
2917 3317 3.200165 ACATCCCCTGCTAAAAGGTACTC 59.800 47.826 0.00 0.00 38.49 2.59
2919 3319 3.200165 AGACATCCCCTGCTAAAAGGTAC 59.800 47.826 0.00 0.00 35.34 3.34
2920 3320 3.199946 CAGACATCCCCTGCTAAAAGGTA 59.800 47.826 0.00 0.00 35.34 3.08
2949 3349 0.810426 GAATCCGGTTCCGCTCTTCC 60.810 60.000 0.00 0.00 0.00 3.46
2951 3351 0.175989 GAGAATCCGGTTCCGCTCTT 59.824 55.000 0.00 0.00 37.56 2.85
2952 3352 0.684805 AGAGAATCCGGTTCCGCTCT 60.685 55.000 0.00 9.09 37.56 4.09
2954 3354 1.136500 GTTAGAGAATCCGGTTCCGCT 59.864 52.381 0.00 7.92 37.56 5.52
2955 3355 1.134907 TGTTAGAGAATCCGGTTCCGC 60.135 52.381 0.00 0.73 37.56 5.54
2956 3356 2.953466 TGTTAGAGAATCCGGTTCCG 57.047 50.000 0.00 4.08 37.56 4.30
2957 3357 4.332819 CACAATGTTAGAGAATCCGGTTCC 59.667 45.833 0.00 0.00 37.56 3.62
2958 3358 5.175859 TCACAATGTTAGAGAATCCGGTTC 58.824 41.667 0.00 4.94 33.66 3.62
2959 3359 5.160607 TCACAATGTTAGAGAATCCGGTT 57.839 39.130 0.00 0.00 33.66 4.44
2960 3360 4.819105 TCACAATGTTAGAGAATCCGGT 57.181 40.909 0.00 0.00 33.66 5.28
2961 3361 4.572389 CCTTCACAATGTTAGAGAATCCGG 59.428 45.833 0.00 0.00 33.66 5.14
2962 3362 5.419542 TCCTTCACAATGTTAGAGAATCCG 58.580 41.667 0.00 0.00 33.66 4.18
2963 3363 7.391833 ACTTTCCTTCACAATGTTAGAGAATCC 59.608 37.037 0.00 0.00 33.66 3.01
2964 3364 8.329203 ACTTTCCTTCACAATGTTAGAGAATC 57.671 34.615 0.00 0.00 0.00 2.52
2965 3365 7.939039 TGACTTTCCTTCACAATGTTAGAGAAT 59.061 33.333 0.00 0.00 0.00 2.40
2966 3366 7.279615 TGACTTTCCTTCACAATGTTAGAGAA 58.720 34.615 0.00 0.00 0.00 2.87
2967 3367 6.826668 TGACTTTCCTTCACAATGTTAGAGA 58.173 36.000 0.00 0.00 0.00 3.10
2968 3368 7.361542 CCATGACTTTCCTTCACAATGTTAGAG 60.362 40.741 0.00 0.00 0.00 2.43
2969 3369 6.430925 CCATGACTTTCCTTCACAATGTTAGA 59.569 38.462 0.00 0.00 0.00 2.10
2970 3370 6.207417 ACCATGACTTTCCTTCACAATGTTAG 59.793 38.462 0.00 0.00 0.00 2.34
2971 3371 6.016360 CACCATGACTTTCCTTCACAATGTTA 60.016 38.462 0.00 0.00 0.00 2.41
2972 3372 4.895297 ACCATGACTTTCCTTCACAATGTT 59.105 37.500 0.00 0.00 0.00 2.71
2973 3373 4.279169 CACCATGACTTTCCTTCACAATGT 59.721 41.667 0.00 0.00 0.00 2.71
2974 3374 4.801891 CACCATGACTTTCCTTCACAATG 58.198 43.478 0.00 0.00 0.00 2.82
2975 3375 3.256631 GCACCATGACTTTCCTTCACAAT 59.743 43.478 0.00 0.00 0.00 2.71
2976 3376 2.622942 GCACCATGACTTTCCTTCACAA 59.377 45.455 0.00 0.00 0.00 3.33
2977 3377 2.158623 AGCACCATGACTTTCCTTCACA 60.159 45.455 0.00 0.00 0.00 3.58
2978 3378 2.508526 AGCACCATGACTTTCCTTCAC 58.491 47.619 0.00 0.00 0.00 3.18
2979 3379 2.957402 AGCACCATGACTTTCCTTCA 57.043 45.000 0.00 0.00 0.00 3.02
2980 3380 3.674997 TGTAGCACCATGACTTTCCTTC 58.325 45.455 0.00 0.00 0.00 3.46
2981 3381 3.073062 ACTGTAGCACCATGACTTTCCTT 59.927 43.478 0.00 0.00 0.00 3.36
2982 3382 2.639839 ACTGTAGCACCATGACTTTCCT 59.360 45.455 0.00 0.00 0.00 3.36
2983 3383 2.744202 CACTGTAGCACCATGACTTTCC 59.256 50.000 0.00 0.00 0.00 3.13
2984 3384 3.403038 ACACTGTAGCACCATGACTTTC 58.597 45.455 0.00 0.00 0.00 2.62
2985 3385 3.492102 ACACTGTAGCACCATGACTTT 57.508 42.857 0.00 0.00 0.00 2.66
2986 3386 3.492102 AACACTGTAGCACCATGACTT 57.508 42.857 0.00 0.00 0.00 3.01
2987 3387 3.141398 CAAACACTGTAGCACCATGACT 58.859 45.455 0.00 0.00 0.00 3.41
2988 3388 2.878406 ACAAACACTGTAGCACCATGAC 59.122 45.455 0.00 0.00 36.10 3.06
2989 3389 3.138304 GACAAACACTGTAGCACCATGA 58.862 45.455 0.00 0.00 38.84 3.07
2990 3390 3.141398 AGACAAACACTGTAGCACCATG 58.859 45.455 0.00 0.00 38.84 3.66
2991 3391 3.492102 AGACAAACACTGTAGCACCAT 57.508 42.857 0.00 0.00 38.84 3.55
2992 3392 3.386726 ACTAGACAAACACTGTAGCACCA 59.613 43.478 0.00 0.00 38.84 4.17
2993 3393 3.741344 CACTAGACAAACACTGTAGCACC 59.259 47.826 0.00 0.00 38.84 5.01
2994 3394 4.369182 ACACTAGACAAACACTGTAGCAC 58.631 43.478 0.00 0.00 38.84 4.40
2995 3395 4.665833 ACACTAGACAAACACTGTAGCA 57.334 40.909 0.00 0.00 38.84 3.49
2996 3396 7.473027 TTTTACACTAGACAAACACTGTAGC 57.527 36.000 0.00 0.00 38.84 3.58
2997 3397 9.256477 TCATTTTACACTAGACAAACACTGTAG 57.744 33.333 0.00 0.00 38.84 2.74
2998 3398 9.602568 TTCATTTTACACTAGACAAACACTGTA 57.397 29.630 0.00 0.00 38.84 2.74
2999 3399 8.500753 TTCATTTTACACTAGACAAACACTGT 57.499 30.769 0.00 0.00 42.61 3.55
3000 3400 8.826710 TCTTCATTTTACACTAGACAAACACTG 58.173 33.333 0.00 0.00 0.00 3.66
3001 3401 8.958119 TCTTCATTTTACACTAGACAAACACT 57.042 30.769 0.00 0.00 0.00 3.55
3002 3402 9.651718 CTTCTTCATTTTACACTAGACAAACAC 57.348 33.333 0.00 0.00 0.00 3.32
3003 3403 9.607988 TCTTCTTCATTTTACACTAGACAAACA 57.392 29.630 0.00 0.00 0.00 2.83
3013 3413 9.678941 CCCTAACTTTTCTTCTTCATTTTACAC 57.321 33.333 0.00 0.00 0.00 2.90
3014 3414 9.635404 TCCCTAACTTTTCTTCTTCATTTTACA 57.365 29.630 0.00 0.00 0.00 2.41
3015 3415 9.894783 GTCCCTAACTTTTCTTCTTCATTTTAC 57.105 33.333 0.00 0.00 0.00 2.01
3016 3416 9.862149 AGTCCCTAACTTTTCTTCTTCATTTTA 57.138 29.630 0.00 0.00 33.03 1.52
3017 3417 8.633561 CAGTCCCTAACTTTTCTTCTTCATTTT 58.366 33.333 0.00 0.00 35.45 1.82
3018 3418 7.780271 ACAGTCCCTAACTTTTCTTCTTCATTT 59.220 33.333 0.00 0.00 35.45 2.32
3019 3419 7.290813 ACAGTCCCTAACTTTTCTTCTTCATT 58.709 34.615 0.00 0.00 35.45 2.57
3020 3420 6.842676 ACAGTCCCTAACTTTTCTTCTTCAT 58.157 36.000 0.00 0.00 35.45 2.57
3021 3421 6.248569 ACAGTCCCTAACTTTTCTTCTTCA 57.751 37.500 0.00 0.00 35.45 3.02
3022 3422 7.932491 ACTAACAGTCCCTAACTTTTCTTCTTC 59.068 37.037 0.00 0.00 35.45 2.87
3023 3423 7.803131 ACTAACAGTCCCTAACTTTTCTTCTT 58.197 34.615 0.00 0.00 35.45 2.52
3024 3424 7.376335 ACTAACAGTCCCTAACTTTTCTTCT 57.624 36.000 0.00 0.00 35.45 2.85
3025 3425 7.818446 CCTACTAACAGTCCCTAACTTTTCTTC 59.182 40.741 0.00 0.00 35.45 2.87
3026 3426 7.291885 ACCTACTAACAGTCCCTAACTTTTCTT 59.708 37.037 0.00 0.00 35.45 2.52
3027 3427 6.786461 ACCTACTAACAGTCCCTAACTTTTCT 59.214 38.462 0.00 0.00 35.45 2.52
3028 3428 7.002250 ACCTACTAACAGTCCCTAACTTTTC 57.998 40.000 0.00 0.00 35.45 2.29
3029 3429 7.179872 CCTACCTACTAACAGTCCCTAACTTTT 59.820 40.741 0.00 0.00 35.45 2.27
3030 3430 6.666980 CCTACCTACTAACAGTCCCTAACTTT 59.333 42.308 0.00 0.00 35.45 2.66
3031 3431 6.193504 CCTACCTACTAACAGTCCCTAACTT 58.806 44.000 0.00 0.00 35.45 2.66
3032 3432 5.254972 ACCTACCTACTAACAGTCCCTAACT 59.745 44.000 0.00 0.00 39.44 2.24
3033 3433 5.514169 ACCTACCTACTAACAGTCCCTAAC 58.486 45.833 0.00 0.00 0.00 2.34
3034 3434 5.803463 ACCTACCTACTAACAGTCCCTAA 57.197 43.478 0.00 0.00 0.00 2.69
3035 3435 5.015603 ACAACCTACCTACTAACAGTCCCTA 59.984 44.000 0.00 0.00 0.00 3.53
3036 3436 4.202760 ACAACCTACCTACTAACAGTCCCT 60.203 45.833 0.00 0.00 0.00 4.20
3037 3437 4.092279 ACAACCTACCTACTAACAGTCCC 58.908 47.826 0.00 0.00 0.00 4.46
3038 3438 5.735285 AACAACCTACCTACTAACAGTCC 57.265 43.478 0.00 0.00 0.00 3.85
3039 3439 7.811713 CAGTAAACAACCTACCTACTAACAGTC 59.188 40.741 0.00 0.00 0.00 3.51
3040 3440 7.288621 ACAGTAAACAACCTACCTACTAACAGT 59.711 37.037 0.00 0.00 0.00 3.55
3041 3441 7.664758 ACAGTAAACAACCTACCTACTAACAG 58.335 38.462 0.00 0.00 0.00 3.16
3042 3442 7.601705 ACAGTAAACAACCTACCTACTAACA 57.398 36.000 0.00 0.00 0.00 2.41
3043 3443 7.386025 CCAACAGTAAACAACCTACCTACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
3044 3444 7.071071 ACCAACAGTAAACAACCTACCTACTAA 59.929 37.037 0.00 0.00 0.00 2.24
3045 3445 6.554605 ACCAACAGTAAACAACCTACCTACTA 59.445 38.462 0.00 0.00 0.00 1.82
3046 3446 5.367644 ACCAACAGTAAACAACCTACCTACT 59.632 40.000 0.00 0.00 0.00 2.57
3047 3447 5.614308 ACCAACAGTAAACAACCTACCTAC 58.386 41.667 0.00 0.00 0.00 3.18
3048 3448 5.892524 ACCAACAGTAAACAACCTACCTA 57.107 39.130 0.00 0.00 0.00 3.08
3049 3449 4.783560 ACCAACAGTAAACAACCTACCT 57.216 40.909 0.00 0.00 0.00 3.08
3050 3450 7.514784 AAATACCAACAGTAAACAACCTACC 57.485 36.000 0.00 0.00 33.70 3.18
3051 3451 9.276590 AGTAAATACCAACAGTAAACAACCTAC 57.723 33.333 0.00 0.00 33.70 3.18
3052 3452 9.275398 CAGTAAATACCAACAGTAAACAACCTA 57.725 33.333 0.00 0.00 33.70 3.08
3053 3453 7.776500 ACAGTAAATACCAACAGTAAACAACCT 59.224 33.333 0.00 0.00 33.70 3.50
3054 3454 7.933396 ACAGTAAATACCAACAGTAAACAACC 58.067 34.615 0.00 0.00 33.70 3.77
3098 3498 9.921637 ACAAATTGACGGTGACATAAAATTAAT 57.078 25.926 0.00 0.00 0.00 1.40
3099 3499 9.751542 AACAAATTGACGGTGACATAAAATTAA 57.248 25.926 0.00 0.00 0.00 1.40
3100 3500 9.751542 AAACAAATTGACGGTGACATAAAATTA 57.248 25.926 0.00 0.00 0.00 1.40
3101 3501 8.547069 CAAACAAATTGACGGTGACATAAAATT 58.453 29.630 0.00 0.00 41.85 1.82
3102 3502 7.708752 ACAAACAAATTGACGGTGACATAAAAT 59.291 29.630 0.00 0.00 41.85 1.82
3103 3503 7.036220 ACAAACAAATTGACGGTGACATAAAA 58.964 30.769 0.00 0.00 41.85 1.52
3104 3504 6.565234 ACAAACAAATTGACGGTGACATAAA 58.435 32.000 0.00 0.00 41.85 1.40
3105 3505 6.137794 ACAAACAAATTGACGGTGACATAA 57.862 33.333 0.00 0.00 41.85 1.90
3106 3506 5.759506 ACAAACAAATTGACGGTGACATA 57.240 34.783 0.00 0.00 41.85 2.29
3107 3507 4.647424 ACAAACAAATTGACGGTGACAT 57.353 36.364 0.00 0.00 41.85 3.06
3108 3508 5.066634 ACATACAAACAAATTGACGGTGACA 59.933 36.000 0.00 0.00 41.85 3.58
3109 3509 5.516090 ACATACAAACAAATTGACGGTGAC 58.484 37.500 0.00 0.00 41.85 3.67
3110 3510 5.759506 ACATACAAACAAATTGACGGTGA 57.240 34.783 0.00 0.00 41.85 4.02
3111 3511 8.514136 AATTACATACAAACAAATTGACGGTG 57.486 30.769 0.00 0.00 41.85 4.94
3112 3512 9.615295 GTAATTACATACAAACAAATTGACGGT 57.385 29.630 10.81 0.00 41.85 4.83
3113 3513 9.834628 AGTAATTACATACAAACAAATTGACGG 57.165 29.630 17.65 0.00 41.85 4.79
3199 3599 9.717942 CCTAACTTCCTTCTTTCTATCCATATG 57.282 37.037 0.00 0.00 0.00 1.78
3200 3600 8.885346 CCCTAACTTCCTTCTTTCTATCCATAT 58.115 37.037 0.00 0.00 0.00 1.78
3201 3601 7.849904 ACCCTAACTTCCTTCTTTCTATCCATA 59.150 37.037 0.00 0.00 0.00 2.74
3202 3602 6.678857 ACCCTAACTTCCTTCTTTCTATCCAT 59.321 38.462 0.00 0.00 0.00 3.41
3203 3603 6.030082 ACCCTAACTTCCTTCTTTCTATCCA 58.970 40.000 0.00 0.00 0.00 3.41
3204 3604 6.563037 ACCCTAACTTCCTTCTTTCTATCC 57.437 41.667 0.00 0.00 0.00 2.59
3205 3605 9.549078 CAATACCCTAACTTCCTTCTTTCTATC 57.451 37.037 0.00 0.00 0.00 2.08
3206 3606 9.059023 ACAATACCCTAACTTCCTTCTTTCTAT 57.941 33.333 0.00 0.00 0.00 1.98
3207 3607 8.445361 ACAATACCCTAACTTCCTTCTTTCTA 57.555 34.615 0.00 0.00 0.00 2.10
3208 3608 7.331089 ACAATACCCTAACTTCCTTCTTTCT 57.669 36.000 0.00 0.00 0.00 2.52
3209 3609 7.280428 GCTACAATACCCTAACTTCCTTCTTTC 59.720 40.741 0.00 0.00 0.00 2.62
3210 3610 7.037514 AGCTACAATACCCTAACTTCCTTCTTT 60.038 37.037 0.00 0.00 0.00 2.52
3211 3611 6.444171 AGCTACAATACCCTAACTTCCTTCTT 59.556 38.462 0.00 0.00 0.00 2.52
3212 3612 5.965091 AGCTACAATACCCTAACTTCCTTCT 59.035 40.000 0.00 0.00 0.00 2.85
3213 3613 6.236558 AGCTACAATACCCTAACTTCCTTC 57.763 41.667 0.00 0.00 0.00 3.46
3214 3614 6.444171 AGAAGCTACAATACCCTAACTTCCTT 59.556 38.462 0.00 0.00 34.27 3.36
3215 3615 5.965091 AGAAGCTACAATACCCTAACTTCCT 59.035 40.000 0.00 0.00 34.27 3.36
3216 3616 6.098552 AGAGAAGCTACAATACCCTAACTTCC 59.901 42.308 0.00 0.00 34.27 3.46
3217 3617 7.114866 AGAGAAGCTACAATACCCTAACTTC 57.885 40.000 0.00 0.00 34.02 3.01
3218 3618 8.476447 GTTAGAGAAGCTACAATACCCTAACTT 58.524 37.037 0.00 0.00 33.96 2.66
3219 3619 7.840210 AGTTAGAGAAGCTACAATACCCTAACT 59.160 37.037 0.00 0.00 38.99 2.24
3220 3620 8.009622 AGTTAGAGAAGCTACAATACCCTAAC 57.990 38.462 0.00 0.00 35.81 2.34
3221 3621 8.605325 AAGTTAGAGAAGCTACAATACCCTAA 57.395 34.615 0.00 0.00 0.00 2.69
3222 3622 8.605325 AAAGTTAGAGAAGCTACAATACCCTA 57.395 34.615 0.00 0.00 0.00 3.53
3223 3623 7.364851 GGAAAGTTAGAGAAGCTACAATACCCT 60.365 40.741 0.00 0.00 0.00 4.34
3224 3624 6.762187 GGAAAGTTAGAGAAGCTACAATACCC 59.238 42.308 0.00 0.00 0.00 3.69
3225 3625 7.557724 AGGAAAGTTAGAGAAGCTACAATACC 58.442 38.462 0.00 0.00 0.00 2.73
3226 3626 9.089601 GAAGGAAAGTTAGAGAAGCTACAATAC 57.910 37.037 0.00 0.00 0.00 1.89
3227 3627 9.036980 AGAAGGAAAGTTAGAGAAGCTACAATA 57.963 33.333 0.00 0.00 0.00 1.90
3228 3628 7.912719 AGAAGGAAAGTTAGAGAAGCTACAAT 58.087 34.615 0.00 0.00 0.00 2.71
3229 3629 7.015292 TGAGAAGGAAAGTTAGAGAAGCTACAA 59.985 37.037 0.00 0.00 0.00 2.41
3230 3630 6.493802 TGAGAAGGAAAGTTAGAGAAGCTACA 59.506 38.462 0.00 0.00 0.00 2.74
3231 3631 6.926313 TGAGAAGGAAAGTTAGAGAAGCTAC 58.074 40.000 0.00 0.00 0.00 3.58
3232 3632 7.540474 TTGAGAAGGAAAGTTAGAGAAGCTA 57.460 36.000 0.00 0.00 0.00 3.32
3233 3633 6.426646 TTGAGAAGGAAAGTTAGAGAAGCT 57.573 37.500 0.00 0.00 0.00 3.74
3234 3634 6.652900 ACATTGAGAAGGAAAGTTAGAGAAGC 59.347 38.462 0.00 0.00 0.00 3.86
3235 3635 8.614469 AACATTGAGAAGGAAAGTTAGAGAAG 57.386 34.615 0.00 0.00 0.00 2.85
3236 3636 9.712305 CTAACATTGAGAAGGAAAGTTAGAGAA 57.288 33.333 0.00 0.00 39.29 2.87
3237 3637 9.090103 TCTAACATTGAGAAGGAAAGTTAGAGA 57.910 33.333 0.00 0.00 40.27 3.10
3239 3639 8.314751 CCTCTAACATTGAGAAGGAAAGTTAGA 58.685 37.037 0.00 0.00 41.85 2.10
3240 3640 8.314751 TCCTCTAACATTGAGAAGGAAAGTTAG 58.685 37.037 0.00 0.00 38.67 2.34
3241 3641 8.202461 TCCTCTAACATTGAGAAGGAAAGTTA 57.798 34.615 0.00 0.00 33.68 2.24
3242 3642 7.079451 TCCTCTAACATTGAGAAGGAAAGTT 57.921 36.000 0.00 0.00 33.68 2.66
3243 3643 6.688073 TCCTCTAACATTGAGAAGGAAAGT 57.312 37.500 0.00 0.00 33.68 2.66
3244 3644 6.765512 GGATCCTCTAACATTGAGAAGGAAAG 59.234 42.308 3.84 0.00 33.68 2.62
3245 3645 6.630413 CGGATCCTCTAACATTGAGAAGGAAA 60.630 42.308 10.75 0.00 33.68 3.13
3246 3646 5.163405 CGGATCCTCTAACATTGAGAAGGAA 60.163 44.000 10.75 0.00 33.68 3.36
3247 3647 4.342378 CGGATCCTCTAACATTGAGAAGGA 59.658 45.833 10.75 0.00 33.68 3.36
3248 3648 4.502259 CCGGATCCTCTAACATTGAGAAGG 60.502 50.000 10.75 0.00 33.68 3.46
3249 3649 4.100189 ACCGGATCCTCTAACATTGAGAAG 59.900 45.833 9.46 0.00 33.68 2.85
3250 3650 4.030913 ACCGGATCCTCTAACATTGAGAA 58.969 43.478 9.46 0.00 33.68 2.87
3251 3651 3.643237 ACCGGATCCTCTAACATTGAGA 58.357 45.455 9.46 0.00 33.68 3.27
3252 3652 4.408182 AACCGGATCCTCTAACATTGAG 57.592 45.455 9.46 0.00 0.00 3.02
3253 3653 5.600898 TCATAACCGGATCCTCTAACATTGA 59.399 40.000 9.46 0.25 0.00 2.57
3254 3654 5.853936 TCATAACCGGATCCTCTAACATTG 58.146 41.667 9.46 0.00 0.00 2.82
3255 3655 6.043243 ACATCATAACCGGATCCTCTAACATT 59.957 38.462 9.46 0.00 0.00 2.71
3256 3656 5.544176 ACATCATAACCGGATCCTCTAACAT 59.456 40.000 9.46 0.00 0.00 2.71
3257 3657 4.899457 ACATCATAACCGGATCCTCTAACA 59.101 41.667 9.46 0.00 0.00 2.41
3258 3658 5.470047 ACATCATAACCGGATCCTCTAAC 57.530 43.478 9.46 0.00 0.00 2.34
3259 3659 6.494666 AAACATCATAACCGGATCCTCTAA 57.505 37.500 9.46 0.00 0.00 2.10
3260 3660 6.494666 AAAACATCATAACCGGATCCTCTA 57.505 37.500 9.46 0.00 0.00 2.43
3261 3661 5.373812 AAAACATCATAACCGGATCCTCT 57.626 39.130 9.46 0.00 0.00 3.69
3262 3662 5.277345 CGAAAAACATCATAACCGGATCCTC 60.277 44.000 9.46 0.00 0.00 3.71
3263 3663 4.574828 CGAAAAACATCATAACCGGATCCT 59.425 41.667 9.46 0.00 0.00 3.24
3264 3664 4.261031 CCGAAAAACATCATAACCGGATCC 60.261 45.833 9.46 0.00 38.10 3.36
3265 3665 4.334481 ACCGAAAAACATCATAACCGGATC 59.666 41.667 9.46 0.00 39.05 3.36
3266 3666 4.266714 ACCGAAAAACATCATAACCGGAT 58.733 39.130 9.46 0.00 39.05 4.18
3267 3667 3.677190 ACCGAAAAACATCATAACCGGA 58.323 40.909 9.46 0.00 39.05 5.14
3268 3668 4.428615 AACCGAAAAACATCATAACCGG 57.571 40.909 0.00 0.00 41.24 5.28
3269 3669 7.024768 ACAATAACCGAAAAACATCATAACCG 58.975 34.615 0.00 0.00 0.00 4.44
3270 3670 8.643752 CAACAATAACCGAAAAACATCATAACC 58.356 33.333 0.00 0.00 0.00 2.85
3271 3671 9.400638 TCAACAATAACCGAAAAACATCATAAC 57.599 29.630 0.00 0.00 0.00 1.89
3272 3672 9.619316 CTCAACAATAACCGAAAAACATCATAA 57.381 29.630 0.00 0.00 0.00 1.90
3302 3702 5.046376 TGTCAAAGTGGAGCATCAGAGATAA 60.046 40.000 0.00 0.00 36.25 1.75
3350 3750 1.670811 CCTTGTTGACACGATATGCCC 59.329 52.381 0.00 0.00 0.00 5.36
3410 3810 7.554118 CCACCAGGATAAATATAGCATAACCAG 59.446 40.741 0.00 0.00 36.89 4.00
3444 3844 6.437162 TGCACTTGCCTTATTTTCTTTCCTAT 59.563 34.615 0.00 0.00 41.18 2.57
3458 3858 1.251251 GTCTCCAATGCACTTGCCTT 58.749 50.000 0.00 0.00 41.18 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.