Multiple sequence alignment - TraesCS4D01G339500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G339500 chr4D 100.000 3524 0 0 1 3524 497175975 497172452 0.000000e+00 6508.0
1 TraesCS4D01G339500 chr4B 90.842 1212 71 25 1637 2828 637980416 637979225 0.000000e+00 1587.0
2 TraesCS4D01G339500 chr4B 88.170 634 63 6 3 632 637983309 637982684 0.000000e+00 745.0
3 TraesCS4D01G339500 chr4B 93.750 496 23 5 757 1248 637981292 637980801 0.000000e+00 737.0
4 TraesCS4D01G339500 chr4B 83.575 621 66 19 2453 3042 637743310 637742695 1.850000e-152 549.0
5 TraesCS4D01G339500 chr4B 78.070 228 38 10 245 462 242704605 242704830 2.210000e-27 134.0
6 TraesCS4D01G339500 chr4B 96.296 54 2 0 703 756 637981391 637981338 4.850000e-14 89.8
7 TraesCS4D01G339500 chr4B 97.297 37 1 0 3346 3382 281733384 281733420 2.940000e-06 63.9
8 TraesCS4D01G339500 chr4B 96.970 33 1 0 3350 3382 562636954 562636986 4.910000e-04 56.5
9 TraesCS4D01G339500 chr5A 87.084 1262 76 28 812 2035 677131908 677130696 0.000000e+00 1347.0
10 TraesCS4D01G339500 chr5A 88.151 903 68 20 2056 2932 677130645 677129756 0.000000e+00 1038.0
11 TraesCS4D01G339500 chr5A 91.952 584 38 7 1 579 677132506 677131927 0.000000e+00 809.0
12 TraesCS4D01G339500 chr5A 92.708 96 7 0 2560 2655 676970496 676970401 4.740000e-29 139.0
13 TraesCS4D01G339500 chr1B 95.473 243 11 0 1000 1242 286975801 286975559 4.270000e-104 388.0
14 TraesCS4D01G339500 chr1D 95.062 243 12 0 1000 1242 200439595 200439837 1.980000e-102 383.0
15 TraesCS4D01G339500 chr1D 81.281 203 26 9 247 440 194821238 194821039 1.690000e-33 154.0
16 TraesCS4D01G339500 chr1A 95.062 243 12 0 1000 1242 253720510 253720752 1.980000e-102 383.0
17 TraesCS4D01G339500 chr1A 97.297 37 1 0 3346 3382 66883054 66883018 2.940000e-06 63.9
18 TraesCS4D01G339500 chr7A 80.889 225 33 7 243 458 168333320 168333097 6.050000e-38 169.0
19 TraesCS4D01G339500 chr7D 83.240 179 26 4 3346 3523 169437044 169437219 1.010000e-35 161.0
20 TraesCS4D01G339500 chr3A 80.500 200 29 7 247 437 576609067 576608869 1.020000e-30 145.0
21 TraesCS4D01G339500 chr4A 81.871 171 29 2 3346 3516 31578712 31578544 3.670000e-30 143.0
22 TraesCS4D01G339500 chr5B 78.319 226 37 11 243 458 482941819 482942042 6.140000e-28 135.0
23 TraesCS4D01G339500 chr6A 78.222 225 38 9 243 458 54489006 54489228 2.210000e-27 134.0
24 TraesCS4D01G339500 chr2B 78.319 226 35 10 244 458 690727133 690727355 2.210000e-27 134.0
25 TraesCS4D01G339500 chr2D 80.556 180 28 3 3346 3524 628340095 628340268 7.940000e-27 132.0
26 TraesCS4D01G339500 chr2D 97.222 36 1 0 3347 3382 106688948 106688983 1.060000e-05 62.1
27 TraesCS4D01G339500 chr7B 95.238 42 2 0 3350 3391 416340804 416340763 2.270000e-07 67.6
28 TraesCS4D01G339500 chr7B 94.595 37 2 0 3346 3382 635354229 635354265 1.370000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G339500 chr4D 497172452 497175975 3523 True 6508.000000 6508 100.000000 1 3524 1 chr4D.!!$R1 3523
1 TraesCS4D01G339500 chr4B 637979225 637983309 4084 True 789.700000 1587 92.264500 3 2828 4 chr4B.!!$R2 2825
2 TraesCS4D01G339500 chr4B 637742695 637743310 615 True 549.000000 549 83.575000 2453 3042 1 chr4B.!!$R1 589
3 TraesCS4D01G339500 chr5A 677129756 677132506 2750 True 1064.666667 1347 89.062333 1 2932 3 chr5A.!!$R2 2931

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
836 2112 0.17691 AGGCCCAACAAAAACAACGG 59.823 50.0 0.0 0.0 0.0 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2765 4169 0.368227 CAGAAACTCATCGCTCGTGC 59.632 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.918294 GGGCTATAAACACCCAGTGTA 57.082 47.619 0.00 0.00 46.79 2.90
24 25 5.057149 GGCTATAAACACCCAGTGTATGAG 58.943 45.833 0.00 0.00 46.79 2.90
46 47 3.989817 GCATCCACAATTGTTTCTGGAAC 59.010 43.478 16.81 10.17 38.78 3.62
94 95 5.752036 TTTTGACATTGGGGCATGATAAA 57.248 34.783 0.00 0.00 0.00 1.40
152 153 2.238646 TGTTATGGCGAGGAGGAAACAT 59.761 45.455 0.00 0.00 0.00 2.71
223 227 2.552315 GGTCGTTCATTTGTCACATGGT 59.448 45.455 0.00 0.00 0.00 3.55
231 235 6.154203 TCATTTGTCACATGGTGCTAAAAA 57.846 33.333 0.00 0.00 32.98 1.94
288 292 7.470563 GCCGATTCTCCCAAAATATTGAGAATT 60.471 37.037 20.95 11.08 38.88 2.17
301 305 7.654287 ATATTGAGAATTGAACCTCCCCTAT 57.346 36.000 0.00 0.00 0.00 2.57
305 309 8.575736 TTGAGAATTGAACCTCCCCTATATTA 57.424 34.615 0.00 0.00 0.00 0.98
632 640 8.978564 TGAACATATTTTAAATGCGTGAACAT 57.021 26.923 0.00 0.00 0.00 2.71
634 642 9.674208 GAACATATTTTAAATGCGTGAACATTG 57.326 29.630 0.00 0.00 40.12 2.82
637 645 9.674208 CATATTTTAAATGCGTGAACATTGTTC 57.326 29.630 20.27 20.27 40.12 3.18
642 650 9.469807 TTTAAATGCGTGAACATTGTTCTAAAT 57.530 25.926 25.49 13.62 40.12 1.40
643 651 6.932901 AATGCGTGAACATTGTTCTAAATG 57.067 33.333 25.49 14.49 38.80 2.32
682 1624 0.180642 TAGGCCGTTTGTTGGTCACA 59.819 50.000 0.00 0.00 31.97 3.58
689 1631 2.017049 GTTTGTTGGTCACAGAGTGCT 58.983 47.619 0.00 0.00 36.48 4.40
694 1636 4.460263 TGTTGGTCACAGAGTGCTAAAAT 58.540 39.130 0.00 0.00 32.98 1.82
695 1637 4.887071 TGTTGGTCACAGAGTGCTAAAATT 59.113 37.500 0.00 0.00 32.98 1.82
698 1640 5.830912 TGGTCACAGAGTGCTAAAATTTTG 58.169 37.500 13.76 5.05 32.98 2.44
699 1641 5.359576 TGGTCACAGAGTGCTAAAATTTTGT 59.640 36.000 13.76 0.00 32.98 2.83
700 1642 6.544197 TGGTCACAGAGTGCTAAAATTTTGTA 59.456 34.615 13.76 0.96 32.98 2.41
774 2049 1.068125 GGTTACAACCCACCAAATCGC 60.068 52.381 0.00 0.00 43.43 4.58
795 2070 0.734889 CATTTGCGGCCTAACTCTGG 59.265 55.000 0.00 0.00 0.00 3.86
798 2073 2.180159 TTGCGGCCTAACTCTGGACC 62.180 60.000 0.00 0.00 0.00 4.46
800 2075 1.686110 CGGCCTAACTCTGGACCCT 60.686 63.158 0.00 0.00 0.00 4.34
801 2076 0.396695 CGGCCTAACTCTGGACCCTA 60.397 60.000 0.00 0.00 0.00 3.53
803 2078 0.753867 GCCTAACTCTGGACCCTAGC 59.246 60.000 0.00 0.00 0.00 3.42
809 2084 1.615424 TCTGGACCCTAGCCAACCC 60.615 63.158 0.00 0.00 34.44 4.11
810 2085 1.616628 CTGGACCCTAGCCAACCCT 60.617 63.158 0.00 0.00 34.44 4.34
815 2090 1.281925 ACCCTAGCCAACCCTCATGG 61.282 60.000 0.00 0.00 41.08 3.66
831 2107 1.524482 TGGCAGGCCCAACAAAAAC 59.476 52.632 8.02 0.00 41.82 2.43
836 2112 0.176910 AGGCCCAACAAAAACAACGG 59.823 50.000 0.00 0.00 0.00 4.44
1261 2564 3.771577 AACTCCCGTTCTTCATCTGTT 57.228 42.857 0.00 0.00 0.00 3.16
1263 2566 1.734465 CTCCCGTTCTTCATCTGTTGC 59.266 52.381 0.00 0.00 0.00 4.17
1318 2621 1.136774 CTGCGATCTTGACCGACGA 59.863 57.895 0.00 0.00 0.00 4.20
1322 2625 0.727970 CGATCTTGACCGACGAGACT 59.272 55.000 0.00 0.00 41.26 3.24
1336 2647 1.063616 CGAGACTCGTAAATCTGCCGA 59.936 52.381 16.83 0.00 34.72 5.54
1363 2698 8.766476 AGATTCTGAAGATCACCAAATCTCTTA 58.234 33.333 0.00 0.00 34.90 2.10
1367 2702 9.035890 TCTGAAGATCACCAAATCTCTTAGTTA 57.964 33.333 0.00 0.00 34.90 2.24
1417 2752 0.108424 AGGAATGACTCGCTGTGCTC 60.108 55.000 0.00 0.00 0.00 4.26
1429 2764 2.537529 CGCTGTGCTCGATTTGTTATGG 60.538 50.000 0.00 0.00 0.00 2.74
1430 2765 2.223340 GCTGTGCTCGATTTGTTATGGG 60.223 50.000 0.00 0.00 0.00 4.00
1454 2789 2.028420 TGCTATGTGTGCCTGTGATC 57.972 50.000 0.00 0.00 0.00 2.92
1458 2793 1.538047 ATGTGTGCCTGTGATCAACC 58.462 50.000 0.00 0.00 0.00 3.77
1460 2795 0.250901 GTGTGCCTGTGATCAACCCT 60.251 55.000 0.00 0.00 0.00 4.34
1461 2796 0.478072 TGTGCCTGTGATCAACCCTT 59.522 50.000 0.00 0.00 0.00 3.95
1462 2797 1.168714 GTGCCTGTGATCAACCCTTC 58.831 55.000 0.00 0.00 0.00 3.46
1463 2798 0.770499 TGCCTGTGATCAACCCTTCA 59.230 50.000 0.00 0.00 0.00 3.02
1464 2799 1.271543 TGCCTGTGATCAACCCTTCAG 60.272 52.381 0.00 0.00 0.00 3.02
1465 2800 1.003580 GCCTGTGATCAACCCTTCAGA 59.996 52.381 9.65 0.00 0.00 3.27
1466 2801 2.938756 GCCTGTGATCAACCCTTCAGAG 60.939 54.545 9.65 2.91 34.09 3.35
1476 2811 1.622811 ACCCTTCAGAGTTCAGAGCAG 59.377 52.381 0.00 0.00 0.00 4.24
1493 2828 5.065218 CAGAGCAGGTTCATATGTTGTTACC 59.935 44.000 1.90 4.49 33.83 2.85
1499 2834 7.255139 GCAGGTTCATATGTTGTTACCCTTATC 60.255 40.741 1.90 0.00 34.01 1.75
1500 2835 6.990349 AGGTTCATATGTTGTTACCCTTATCG 59.010 38.462 1.90 0.00 34.01 2.92
1518 2853 6.019479 CCTTATCGATTGTCTTGCTTACTGTC 60.019 42.308 1.71 0.00 0.00 3.51
1523 2858 2.483876 TGTCTTGCTTACTGTCACTGC 58.516 47.619 0.00 0.00 0.00 4.40
1532 2867 4.377841 GCTTACTGTCACTGCTTGTCAATC 60.378 45.833 0.00 0.00 0.00 2.67
1536 2871 1.875514 GTCACTGCTTGTCAATCTGCA 59.124 47.619 0.00 0.00 0.00 4.41
1537 2872 2.291465 GTCACTGCTTGTCAATCTGCAA 59.709 45.455 0.35 0.00 34.90 4.08
1547 2882 6.856135 TTGTCAATCTGCAAGCATAGATAG 57.144 37.500 0.00 0.00 33.49 2.08
1569 2904 9.277783 GATAGACATTTCTGTAATTACCTGCAT 57.722 33.333 13.01 0.00 35.14 3.96
1586 2921 2.546778 GCATTGATTTGATGCCCTGTG 58.453 47.619 0.00 0.00 43.10 3.66
1595 2930 3.650281 TGATGCCCTGTGATGTTATGT 57.350 42.857 0.00 0.00 0.00 2.29
1615 2950 5.988310 TGTTGCATCTTGAGAATGGATTT 57.012 34.783 0.00 0.00 0.00 2.17
1617 2952 4.994907 TGCATCTTGAGAATGGATTTGG 57.005 40.909 0.00 0.00 0.00 3.28
1622 2957 6.294397 GCATCTTGAGAATGGATTTGGTATCC 60.294 42.308 0.00 0.00 38.66 2.59
1623 2958 6.581388 TCTTGAGAATGGATTTGGTATCCT 57.419 37.500 5.48 0.00 38.95 3.24
1624 2959 7.690454 TCTTGAGAATGGATTTGGTATCCTA 57.310 36.000 5.48 0.00 38.95 2.94
1625 2960 8.101309 TCTTGAGAATGGATTTGGTATCCTAA 57.899 34.615 5.48 0.00 38.95 2.69
1626 2961 8.556589 TCTTGAGAATGGATTTGGTATCCTAAA 58.443 33.333 5.48 0.00 38.95 1.85
1642 2977 9.516314 GGTATCCTAAAATTGAACTGTTTATGC 57.484 33.333 0.00 0.00 0.00 3.14
1819 3155 5.989477 TGCTTTACCTGTAGCAGTTATGAT 58.011 37.500 0.00 0.00 42.12 2.45
1883 3220 5.609533 TTAGTGGATACCCTAGCTTGTTC 57.390 43.478 0.00 0.00 0.00 3.18
1887 3224 4.347000 GTGGATACCCTAGCTTGTTCCATA 59.653 45.833 0.00 0.00 34.55 2.74
1925 3272 8.582437 CATATGGAATGCCTGTTTCATCTAATT 58.418 33.333 0.00 0.00 34.31 1.40
1952 3301 2.883574 AGTTTGATGCATTTCATGGCG 58.116 42.857 0.00 0.00 35.05 5.69
1987 3337 4.882671 ATGTAGTCGTTTGGATGCATTC 57.117 40.909 0.00 0.00 0.00 2.67
2110 3500 6.164876 TCACTTGATGTTGGGCAAAATATTG 58.835 36.000 0.00 0.00 39.65 1.90
2142 3532 8.780249 GCATTTCCTTGTCTGTAAACTACTTTA 58.220 33.333 0.00 0.00 0.00 1.85
2186 3577 3.947196 TGTTTGCTTGTCATGTCTTCTGT 59.053 39.130 0.00 0.00 0.00 3.41
2192 3584 6.159293 TGCTTGTCATGTCTTCTGTAGTAAG 58.841 40.000 0.00 0.00 0.00 2.34
2196 3588 7.754851 TGTCATGTCTTCTGTAGTAAGTGTA 57.245 36.000 0.00 0.00 0.00 2.90
2198 3590 7.447545 TGTCATGTCTTCTGTAGTAAGTGTAGT 59.552 37.037 0.00 0.00 0.00 2.73
2203 3595 5.183331 TCTTCTGTAGTAAGTGTAGTGCTGG 59.817 44.000 0.00 0.00 0.00 4.85
2212 3604 4.985538 AGTGTAGTGCTGGACTATGTAC 57.014 45.455 12.26 11.41 39.44 2.90
2226 3618 6.127168 TGGACTATGTACCAGTGGTTTCATAG 60.127 42.308 35.06 35.06 44.54 2.23
2233 3625 5.505181 ACCAGTGGTTTCATAGATGTCTT 57.495 39.130 9.70 0.00 27.29 3.01
2301 3702 5.287674 TCATCAAGAAGAGGATCCATGTC 57.712 43.478 15.82 7.48 30.96 3.06
2451 3852 1.606313 CAAGCCGGGGTTCATGGTT 60.606 57.895 8.83 0.00 0.00 3.67
2490 3891 1.768888 GGTCACCCCCATCCCGTAT 60.769 63.158 0.00 0.00 0.00 3.06
2517 3918 0.036388 TCAACGATCTCAAGGGTGGC 60.036 55.000 0.00 0.00 0.00 5.01
2586 3990 6.058183 AGTATCTATGCTTGTTCCCAATGTC 58.942 40.000 0.00 0.00 0.00 3.06
2679 4083 4.384940 TGTGGTTGATTTCATTCTCGTCA 58.615 39.130 0.00 0.00 0.00 4.35
2705 4109 6.570672 CACTCATGCTGCTGGATATATTTT 57.429 37.500 0.00 0.00 0.00 1.82
2715 4119 6.572519 TGCTGGATATATTTTGCTTTTGGTC 58.427 36.000 0.00 0.00 0.00 4.02
2739 4143 5.564651 CGATTGGGCAATTGTTTGTTCTACT 60.565 40.000 7.40 0.00 35.17 2.57
2753 4157 8.044908 TGTTTGTTCTACTAGTTCCTTTTGAGT 58.955 33.333 0.00 0.00 0.00 3.41
2765 4169 4.005650 TCCTTTTGAGTAGCTGCAGATTG 58.994 43.478 20.43 0.00 0.00 2.67
2777 4181 1.423721 GCAGATTGCACGAGCGATGA 61.424 55.000 12.62 0.00 44.95 2.92
2778 4182 0.575859 CAGATTGCACGAGCGATGAG 59.424 55.000 12.62 0.97 44.95 2.90
2783 4187 0.038251 TGCACGAGCGATGAGTTTCT 60.038 50.000 0.00 0.00 46.23 2.52
2784 4188 0.368227 GCACGAGCGATGAGTTTCTG 59.632 55.000 0.00 0.00 0.00 3.02
2788 4192 0.642800 GAGCGATGAGTTTCTGACGC 59.357 55.000 0.00 0.00 45.03 5.19
2796 4200 3.476552 TGAGTTTCTGACGCAATTCCTT 58.523 40.909 0.00 0.00 35.00 3.36
2820 4224 1.881602 GCAAGCAGCTTTGAGAGGG 59.118 57.895 4.38 0.00 41.15 4.30
2848 4267 6.378280 ACCAATTTCTATGTGAAAGGACATCC 59.622 38.462 0.00 0.00 46.39 3.51
2856 4275 6.862469 ATGTGAAAGGACATCCAATGAAAT 57.138 33.333 0.00 0.00 38.89 2.17
2913 4332 2.032030 ACGTGCTCAAAATTCTCAACCG 60.032 45.455 0.00 0.00 0.00 4.44
2916 4335 2.360483 TGCTCAAAATTCTCAACCGCAA 59.640 40.909 0.00 0.00 0.00 4.85
2917 4336 3.005684 TGCTCAAAATTCTCAACCGCAAT 59.994 39.130 0.00 0.00 0.00 3.56
2941 4374 1.027357 GGAGTACCGCGGTTCAGATA 58.973 55.000 38.94 15.27 0.00 1.98
2942 4375 1.268948 GGAGTACCGCGGTTCAGATAC 60.269 57.143 38.94 26.65 0.00 2.24
2952 4387 4.098055 CGGTTCAGATACGCATATAGCT 57.902 45.455 0.00 0.00 42.61 3.32
2959 4394 8.750416 GTTCAGATACGCATATAGCTGATAATG 58.250 37.037 8.03 0.00 44.69 1.90
2996 4431 2.094258 GCCACATATATCGGCGAATGTG 59.906 50.000 31.45 31.45 45.59 3.21
3017 4452 3.247886 TGTCGCATCTAAGTAGAGCGTAG 59.752 47.826 20.96 0.29 43.58 3.51
3043 4478 7.946381 TGTATAAAACAGCCATGGATAAACA 57.054 32.000 18.40 3.63 33.01 2.83
3044 4479 8.354711 TGTATAAAACAGCCATGGATAAACAA 57.645 30.769 18.40 0.00 33.01 2.83
3045 4480 8.807118 TGTATAAAACAGCCATGGATAAACAAA 58.193 29.630 18.40 0.00 33.01 2.83
3046 4481 9.646427 GTATAAAACAGCCATGGATAAACAAAA 57.354 29.630 18.40 0.00 0.00 2.44
3069 4504 3.277142 AAATACGGGACTTGCTAAGGG 57.723 47.619 0.00 0.00 0.00 3.95
3070 4505 1.875488 ATACGGGACTTGCTAAGGGT 58.125 50.000 0.00 0.00 0.00 4.34
3071 4506 2.530460 TACGGGACTTGCTAAGGGTA 57.470 50.000 0.00 0.00 0.00 3.69
3072 4507 1.648116 ACGGGACTTGCTAAGGGTAA 58.352 50.000 0.00 0.00 0.00 2.85
3073 4508 1.553704 ACGGGACTTGCTAAGGGTAAG 59.446 52.381 0.00 0.00 42.17 2.34
3079 4514 4.976540 ACTTGCTAAGGGTAAGTTGACT 57.023 40.909 0.00 0.00 46.04 3.41
3080 4515 4.642429 ACTTGCTAAGGGTAAGTTGACTG 58.358 43.478 0.00 0.00 46.04 3.51
3081 4516 4.347000 ACTTGCTAAGGGTAAGTTGACTGA 59.653 41.667 0.00 0.00 46.04 3.41
3082 4517 4.967084 TGCTAAGGGTAAGTTGACTGAA 57.033 40.909 0.00 0.00 0.00 3.02
3083 4518 5.298989 TGCTAAGGGTAAGTTGACTGAAA 57.701 39.130 0.00 0.00 0.00 2.69
3084 4519 5.686753 TGCTAAGGGTAAGTTGACTGAAAA 58.313 37.500 0.00 0.00 0.00 2.29
3085 4520 6.303839 TGCTAAGGGTAAGTTGACTGAAAAT 58.696 36.000 0.00 0.00 0.00 1.82
3086 4521 6.775629 TGCTAAGGGTAAGTTGACTGAAAATT 59.224 34.615 0.00 0.00 0.00 1.82
3087 4522 7.040686 TGCTAAGGGTAAGTTGACTGAAAATTC 60.041 37.037 0.00 0.00 0.00 2.17
3088 4523 7.040686 GCTAAGGGTAAGTTGACTGAAAATTCA 60.041 37.037 0.00 0.00 35.57 2.57
3089 4524 7.654022 AAGGGTAAGTTGACTGAAAATTCAA 57.346 32.000 0.00 0.00 36.64 2.69
3090 4525 7.839680 AGGGTAAGTTGACTGAAAATTCAAT 57.160 32.000 0.00 0.00 36.64 2.57
3091 4526 8.934023 AGGGTAAGTTGACTGAAAATTCAATA 57.066 30.769 0.00 0.00 36.64 1.90
3092 4527 9.362151 AGGGTAAGTTGACTGAAAATTCAATAA 57.638 29.630 0.00 0.00 36.64 1.40
3093 4528 9.974980 GGGTAAGTTGACTGAAAATTCAATAAA 57.025 29.630 0.00 0.00 36.64 1.40
3098 4533 9.546428 AGTTGACTGAAAATTCAATAAAAAGGG 57.454 29.630 0.00 0.00 36.64 3.95
3099 4534 9.541143 GTTGACTGAAAATTCAATAAAAAGGGA 57.459 29.630 0.00 0.00 36.64 4.20
3101 4536 9.927668 TGACTGAAAATTCAATAAAAAGGGATC 57.072 29.630 0.00 0.00 36.64 3.36
3102 4537 9.927668 GACTGAAAATTCAATAAAAAGGGATCA 57.072 29.630 0.00 0.00 36.64 2.92
3103 4538 9.933723 ACTGAAAATTCAATAAAAAGGGATCAG 57.066 29.630 0.00 0.00 36.64 2.90
3110 4545 8.899887 TTCAATAAAAAGGGATCAGAATTCCT 57.100 30.769 0.65 0.00 43.45 3.36
3112 4547 8.971073 TCAATAAAAAGGGATCAGAATTCCTTC 58.029 33.333 0.65 0.00 46.51 3.46
3113 4548 8.752187 CAATAAAAAGGGATCAGAATTCCTTCA 58.248 33.333 0.65 0.00 46.51 3.02
3114 4549 8.899887 ATAAAAAGGGATCAGAATTCCTTCAA 57.100 30.769 0.65 0.00 46.51 2.69
3115 4550 6.596309 AAAAGGGATCAGAATTCCTTCAAC 57.404 37.500 0.65 0.00 46.51 3.18
3116 4551 4.242336 AGGGATCAGAATTCCTTCAACC 57.758 45.455 0.65 0.00 37.67 3.77
3117 4552 3.854994 AGGGATCAGAATTCCTTCAACCT 59.145 43.478 0.65 0.76 37.67 3.50
3118 4553 4.293368 AGGGATCAGAATTCCTTCAACCTT 59.707 41.667 0.65 0.00 37.67 3.50
3119 4554 4.642437 GGGATCAGAATTCCTTCAACCTTC 59.358 45.833 0.65 0.00 33.56 3.46
3120 4555 5.256474 GGATCAGAATTCCTTCAACCTTCA 58.744 41.667 0.65 0.00 33.56 3.02
3121 4556 5.356470 GGATCAGAATTCCTTCAACCTTCAG 59.644 44.000 0.65 0.00 33.56 3.02
3122 4557 5.310409 TCAGAATTCCTTCAACCTTCAGT 57.690 39.130 0.65 0.00 33.56 3.41
3123 4558 5.694995 TCAGAATTCCTTCAACCTTCAGTT 58.305 37.500 0.65 0.00 40.16 3.16
3124 4559 6.837312 TCAGAATTCCTTCAACCTTCAGTTA 58.163 36.000 0.65 0.00 36.18 2.24
3125 4560 6.710744 TCAGAATTCCTTCAACCTTCAGTTAC 59.289 38.462 0.65 0.00 36.18 2.50
3126 4561 6.712547 CAGAATTCCTTCAACCTTCAGTTACT 59.287 38.462 0.65 0.00 36.18 2.24
3127 4562 7.229506 CAGAATTCCTTCAACCTTCAGTTACTT 59.770 37.037 0.65 0.00 36.18 2.24
3128 4563 7.780271 AGAATTCCTTCAACCTTCAGTTACTTT 59.220 33.333 0.65 0.00 36.18 2.66
3129 4564 6.937436 TTCCTTCAACCTTCAGTTACTTTC 57.063 37.500 0.00 0.00 36.18 2.62
3130 4565 5.996644 TCCTTCAACCTTCAGTTACTTTCA 58.003 37.500 0.00 0.00 36.18 2.69
3131 4566 5.820947 TCCTTCAACCTTCAGTTACTTTCAC 59.179 40.000 0.00 0.00 36.18 3.18
3132 4567 5.008712 CCTTCAACCTTCAGTTACTTTCACC 59.991 44.000 0.00 0.00 36.18 4.02
3133 4568 4.124238 TCAACCTTCAGTTACTTTCACCG 58.876 43.478 0.00 0.00 36.18 4.94
3134 4569 2.490991 ACCTTCAGTTACTTTCACCGC 58.509 47.619 0.00 0.00 0.00 5.68
3135 4570 1.804748 CCTTCAGTTACTTTCACCGCC 59.195 52.381 0.00 0.00 0.00 6.13
3136 4571 2.550208 CCTTCAGTTACTTTCACCGCCT 60.550 50.000 0.00 0.00 0.00 5.52
3137 4572 2.163818 TCAGTTACTTTCACCGCCTG 57.836 50.000 0.00 0.00 0.00 4.85
3138 4573 1.414919 TCAGTTACTTTCACCGCCTGT 59.585 47.619 0.00 0.00 0.00 4.00
3139 4574 1.531149 CAGTTACTTTCACCGCCTGTG 59.469 52.381 0.00 0.00 46.88 3.66
3140 4575 0.872388 GTTACTTTCACCGCCTGTGG 59.128 55.000 1.57 0.00 45.48 4.17
3141 4576 0.887387 TTACTTTCACCGCCTGTGGC 60.887 55.000 0.00 0.00 45.48 5.01
3177 4612 4.296729 AGCCTTGCTGCCTTGCCT 62.297 61.111 0.00 0.00 37.57 4.75
3178 4613 3.308705 GCCTTGCTGCCTTGCCTT 61.309 61.111 0.00 0.00 0.00 4.35
3179 4614 2.968206 CCTTGCTGCCTTGCCTTC 59.032 61.111 0.00 0.00 0.00 3.46
3180 4615 2.643232 CCTTGCTGCCTTGCCTTCC 61.643 63.158 0.00 0.00 0.00 3.46
3181 4616 2.985282 TTGCTGCCTTGCCTTCCG 60.985 61.111 0.00 0.00 0.00 4.30
3184 4619 3.130160 CTGCCTTGCCTTCCGCTC 61.130 66.667 0.00 0.00 38.78 5.03
3185 4620 3.618780 CTGCCTTGCCTTCCGCTCT 62.619 63.158 0.00 0.00 38.78 4.09
3186 4621 2.821810 GCCTTGCCTTCCGCTCTC 60.822 66.667 0.00 0.00 38.78 3.20
3187 4622 2.665000 CCTTGCCTTCCGCTCTCA 59.335 61.111 0.00 0.00 38.78 3.27
3188 4623 1.003355 CCTTGCCTTCCGCTCTCAA 60.003 57.895 0.00 0.00 38.78 3.02
3189 4624 0.393537 CCTTGCCTTCCGCTCTCAAT 60.394 55.000 0.00 0.00 38.78 2.57
3190 4625 1.012841 CTTGCCTTCCGCTCTCAATC 58.987 55.000 0.00 0.00 38.78 2.67
3191 4626 0.324614 TTGCCTTCCGCTCTCAATCA 59.675 50.000 0.00 0.00 38.78 2.57
3192 4627 0.543277 TGCCTTCCGCTCTCAATCAT 59.457 50.000 0.00 0.00 38.78 2.45
3193 4628 1.065199 TGCCTTCCGCTCTCAATCATT 60.065 47.619 0.00 0.00 38.78 2.57
3194 4629 1.332997 GCCTTCCGCTCTCAATCATTG 59.667 52.381 0.00 0.00 0.00 2.82
3195 4630 1.332997 CCTTCCGCTCTCAATCATTGC 59.667 52.381 0.00 0.00 0.00 3.56
3196 4631 1.332997 CTTCCGCTCTCAATCATTGCC 59.667 52.381 0.00 0.00 0.00 4.52
3197 4632 0.464373 TCCGCTCTCAATCATTGCCC 60.464 55.000 0.00 0.00 0.00 5.36
3198 4633 0.749091 CCGCTCTCAATCATTGCCCA 60.749 55.000 0.00 0.00 0.00 5.36
3199 4634 0.379669 CGCTCTCAATCATTGCCCAC 59.620 55.000 0.00 0.00 0.00 4.61
3200 4635 0.379669 GCTCTCAATCATTGCCCACG 59.620 55.000 0.00 0.00 0.00 4.94
3201 4636 1.019673 CTCTCAATCATTGCCCACGG 58.980 55.000 0.00 0.00 0.00 4.94
3219 4654 2.111878 CCGTCCATGGCATCCCTC 59.888 66.667 6.96 0.00 0.00 4.30
3220 4655 2.446848 CCGTCCATGGCATCCCTCT 61.447 63.158 6.96 0.00 0.00 3.69
3221 4656 1.121407 CCGTCCATGGCATCCCTCTA 61.121 60.000 6.96 0.00 0.00 2.43
3222 4657 0.758734 CGTCCATGGCATCCCTCTAA 59.241 55.000 6.96 0.00 0.00 2.10
3223 4658 1.541233 CGTCCATGGCATCCCTCTAAC 60.541 57.143 6.96 0.00 0.00 2.34
3224 4659 1.140312 TCCATGGCATCCCTCTAACC 58.860 55.000 6.96 0.00 0.00 2.85
3225 4660 0.111253 CCATGGCATCCCTCTAACCC 59.889 60.000 0.00 0.00 0.00 4.11
3226 4661 0.846015 CATGGCATCCCTCTAACCCA 59.154 55.000 0.00 0.00 0.00 4.51
3227 4662 1.143813 ATGGCATCCCTCTAACCCAG 58.856 55.000 0.00 0.00 0.00 4.45
3228 4663 0.253160 TGGCATCCCTCTAACCCAGT 60.253 55.000 0.00 0.00 0.00 4.00
3229 4664 0.181350 GGCATCCCTCTAACCCAGTG 59.819 60.000 0.00 0.00 0.00 3.66
3230 4665 1.204146 GCATCCCTCTAACCCAGTGA 58.796 55.000 0.00 0.00 0.00 3.41
3231 4666 1.559682 GCATCCCTCTAACCCAGTGAA 59.440 52.381 0.00 0.00 0.00 3.18
3232 4667 2.173569 GCATCCCTCTAACCCAGTGAAT 59.826 50.000 0.00 0.00 0.00 2.57
3233 4668 3.745797 GCATCCCTCTAACCCAGTGAATC 60.746 52.174 0.00 0.00 0.00 2.52
3234 4669 3.491766 TCCCTCTAACCCAGTGAATCT 57.508 47.619 0.00 0.00 0.00 2.40
3235 4670 3.107601 TCCCTCTAACCCAGTGAATCTG 58.892 50.000 0.00 0.00 43.27 2.90
3236 4671 2.420687 CCCTCTAACCCAGTGAATCTGC 60.421 54.545 0.00 0.00 42.38 4.26
3237 4672 2.237143 CCTCTAACCCAGTGAATCTGCA 59.763 50.000 0.00 0.00 42.38 4.41
3238 4673 3.118112 CCTCTAACCCAGTGAATCTGCAT 60.118 47.826 0.00 0.00 42.38 3.96
3239 4674 4.125703 CTCTAACCCAGTGAATCTGCATC 58.874 47.826 0.00 0.00 42.38 3.91
3240 4675 2.885135 AACCCAGTGAATCTGCATCA 57.115 45.000 0.00 0.00 42.38 3.07
3241 4676 2.119801 ACCCAGTGAATCTGCATCAC 57.880 50.000 10.35 10.35 45.94 3.06
3247 4682 3.736530 GTGAATCTGCATCACACTCAC 57.263 47.619 12.91 5.24 45.13 3.51
3248 4683 3.069289 GTGAATCTGCATCACACTCACA 58.931 45.455 12.91 0.00 45.13 3.58
3249 4684 3.069289 TGAATCTGCATCACACTCACAC 58.931 45.455 0.00 0.00 0.00 3.82
3250 4685 2.105006 ATCTGCATCACACTCACACC 57.895 50.000 0.00 0.00 0.00 4.16
3251 4686 1.051008 TCTGCATCACACTCACACCT 58.949 50.000 0.00 0.00 0.00 4.00
3252 4687 1.001293 TCTGCATCACACTCACACCTC 59.999 52.381 0.00 0.00 0.00 3.85
3253 4688 1.001746 CTGCATCACACTCACACCTCT 59.998 52.381 0.00 0.00 0.00 3.69
3254 4689 2.232208 CTGCATCACACTCACACCTCTA 59.768 50.000 0.00 0.00 0.00 2.43
3255 4690 2.632512 TGCATCACACTCACACCTCTAA 59.367 45.455 0.00 0.00 0.00 2.10
3256 4691 3.257393 GCATCACACTCACACCTCTAAG 58.743 50.000 0.00 0.00 0.00 2.18
3257 4692 3.056536 GCATCACACTCACACCTCTAAGA 60.057 47.826 0.00 0.00 0.00 2.10
3258 4693 4.382470 GCATCACACTCACACCTCTAAGAT 60.382 45.833 0.00 0.00 0.00 2.40
3259 4694 5.163509 GCATCACACTCACACCTCTAAGATA 60.164 44.000 0.00 0.00 0.00 1.98
3260 4695 6.628175 GCATCACACTCACACCTCTAAGATAA 60.628 42.308 0.00 0.00 0.00 1.75
3261 4696 7.495901 CATCACACTCACACCTCTAAGATAAT 58.504 38.462 0.00 0.00 0.00 1.28
3262 4697 6.867550 TCACACTCACACCTCTAAGATAATG 58.132 40.000 0.00 0.00 0.00 1.90
3263 4698 6.045318 CACACTCACACCTCTAAGATAATGG 58.955 44.000 0.00 0.00 0.00 3.16
3264 4699 5.129485 ACACTCACACCTCTAAGATAATGGG 59.871 44.000 0.00 0.00 0.00 4.00
3265 4700 4.656112 ACTCACACCTCTAAGATAATGGGG 59.344 45.833 0.00 0.00 0.00 4.96
3266 4701 3.973973 TCACACCTCTAAGATAATGGGGG 59.026 47.826 0.00 0.00 0.00 5.40
3267 4702 2.711547 ACACCTCTAAGATAATGGGGGC 59.288 50.000 0.00 0.00 0.00 5.80
3268 4703 2.040412 CACCTCTAAGATAATGGGGGCC 59.960 54.545 0.00 0.00 0.00 5.80
3269 4704 1.279271 CCTCTAAGATAATGGGGGCCG 59.721 57.143 0.00 0.00 0.00 6.13
3270 4705 1.978580 CTCTAAGATAATGGGGGCCGT 59.021 52.381 0.00 0.00 0.00 5.68
3271 4706 1.975680 TCTAAGATAATGGGGGCCGTC 59.024 52.381 0.00 0.00 0.00 4.79
3272 4707 1.978580 CTAAGATAATGGGGGCCGTCT 59.021 52.381 0.00 0.00 0.00 4.18
3273 4708 0.765510 AAGATAATGGGGGCCGTCTC 59.234 55.000 0.00 0.00 0.00 3.36
3274 4709 0.104934 AGATAATGGGGGCCGTCTCT 60.105 55.000 0.00 0.00 0.00 3.10
3275 4710 0.321996 GATAATGGGGGCCGTCTCTC 59.678 60.000 0.00 0.00 0.00 3.20
3276 4711 0.104934 ATAATGGGGGCCGTCTCTCT 60.105 55.000 0.00 0.00 0.00 3.10
3277 4712 0.759436 TAATGGGGGCCGTCTCTCTC 60.759 60.000 0.00 0.00 0.00 3.20
3278 4713 2.537714 AATGGGGGCCGTCTCTCTCT 62.538 60.000 0.00 0.00 0.00 3.10
3279 4714 1.656092 ATGGGGGCCGTCTCTCTCTA 61.656 60.000 0.00 0.00 0.00 2.43
3280 4715 1.076192 GGGGGCCGTCTCTCTCTAA 60.076 63.158 0.00 0.00 0.00 2.10
3281 4716 1.110518 GGGGGCCGTCTCTCTCTAAG 61.111 65.000 0.00 0.00 0.00 2.18
3282 4717 0.106619 GGGGCCGTCTCTCTCTAAGA 60.107 60.000 0.00 0.00 0.00 2.10
3296 4731 7.860918 TCTCTCTAAGAGCAACTATAAACGA 57.139 36.000 0.00 0.00 42.04 3.85
3297 4732 8.453238 TCTCTCTAAGAGCAACTATAAACGAT 57.547 34.615 0.00 0.00 42.04 3.73
3298 4733 8.561212 TCTCTCTAAGAGCAACTATAAACGATC 58.439 37.037 0.00 0.00 42.04 3.69
3299 4734 7.649973 TCTCTAAGAGCAACTATAAACGATCC 58.350 38.462 0.00 0.00 0.00 3.36
3300 4735 6.746120 TCTAAGAGCAACTATAAACGATCCC 58.254 40.000 0.00 0.00 0.00 3.85
3301 4736 5.615925 AAGAGCAACTATAAACGATCCCT 57.384 39.130 0.00 0.00 0.00 4.20
3302 4737 6.726490 AAGAGCAACTATAAACGATCCCTA 57.274 37.500 0.00 0.00 0.00 3.53
3303 4738 6.726490 AGAGCAACTATAAACGATCCCTAA 57.274 37.500 0.00 0.00 0.00 2.69
3304 4739 7.120923 AGAGCAACTATAAACGATCCCTAAA 57.879 36.000 0.00 0.00 0.00 1.85
3305 4740 7.562135 AGAGCAACTATAAACGATCCCTAAAA 58.438 34.615 0.00 0.00 0.00 1.52
3306 4741 8.044908 AGAGCAACTATAAACGATCCCTAAAAA 58.955 33.333 0.00 0.00 0.00 1.94
3307 4742 8.747538 AGCAACTATAAACGATCCCTAAAAAT 57.252 30.769 0.00 0.00 0.00 1.82
3308 4743 9.841295 AGCAACTATAAACGATCCCTAAAAATA 57.159 29.630 0.00 0.00 0.00 1.40
3322 4757 8.741603 TCCCTAAAAATAGAGGATTAAAACGG 57.258 34.615 0.00 0.00 34.46 4.44
3323 4758 7.283807 TCCCTAAAAATAGAGGATTAAAACGGC 59.716 37.037 0.00 0.00 34.46 5.68
3324 4759 7.067737 CCCTAAAAATAGAGGATTAAAACGGCA 59.932 37.037 0.00 0.00 34.46 5.69
3325 4760 8.463607 CCTAAAAATAGAGGATTAAAACGGCAA 58.536 33.333 0.00 0.00 34.46 4.52
3326 4761 9.849166 CTAAAAATAGAGGATTAAAACGGCAAA 57.151 29.630 0.00 0.00 0.00 3.68
3327 4762 8.757164 AAAAATAGAGGATTAAAACGGCAAAG 57.243 30.769 0.00 0.00 0.00 2.77
3328 4763 7.462571 AAATAGAGGATTAAAACGGCAAAGT 57.537 32.000 0.00 0.00 0.00 2.66
3329 4764 8.570068 AAATAGAGGATTAAAACGGCAAAGTA 57.430 30.769 0.00 0.00 0.00 2.24
3330 4765 8.570068 AATAGAGGATTAAAACGGCAAAGTAA 57.430 30.769 0.00 0.00 0.00 2.24
3331 4766 6.887626 AGAGGATTAAAACGGCAAAGTAAA 57.112 33.333 0.00 0.00 0.00 2.01
3332 4767 6.675026 AGAGGATTAAAACGGCAAAGTAAAC 58.325 36.000 0.00 0.00 0.00 2.01
3333 4768 6.489022 AGAGGATTAAAACGGCAAAGTAAACT 59.511 34.615 0.00 0.00 0.00 2.66
3334 4769 7.013942 AGAGGATTAAAACGGCAAAGTAAACTT 59.986 33.333 0.00 0.00 37.91 2.66
3335 4770 7.143340 AGGATTAAAACGGCAAAGTAAACTTC 58.857 34.615 0.00 0.00 34.61 3.01
3336 4771 6.919115 GGATTAAAACGGCAAAGTAAACTTCA 59.081 34.615 0.00 0.00 34.61 3.02
3337 4772 7.114388 GGATTAAAACGGCAAAGTAAACTTCAG 59.886 37.037 0.00 0.00 34.61 3.02
3338 4773 4.976224 AAACGGCAAAGTAAACTTCAGT 57.024 36.364 0.00 0.00 34.61 3.41
3339 4774 3.963383 ACGGCAAAGTAAACTTCAGTG 57.037 42.857 0.00 0.00 34.61 3.66
3340 4775 3.537580 ACGGCAAAGTAAACTTCAGTGA 58.462 40.909 0.00 0.00 34.61 3.41
3341 4776 3.942748 ACGGCAAAGTAAACTTCAGTGAA 59.057 39.130 5.25 5.25 34.61 3.18
3342 4777 4.035208 ACGGCAAAGTAAACTTCAGTGAAG 59.965 41.667 27.66 27.66 44.37 3.02
3356 4791 6.569179 TTCAGTGAAGTATAAGTTTTGGCC 57.431 37.500 0.08 0.00 0.00 5.36
3357 4792 4.693566 TCAGTGAAGTATAAGTTTTGGCCG 59.306 41.667 0.00 0.00 0.00 6.13
3358 4793 4.454504 CAGTGAAGTATAAGTTTTGGCCGT 59.545 41.667 0.00 0.00 0.00 5.68
3359 4794 5.048991 CAGTGAAGTATAAGTTTTGGCCGTT 60.049 40.000 0.00 0.00 0.00 4.44
3360 4795 5.533528 AGTGAAGTATAAGTTTTGGCCGTTT 59.466 36.000 0.00 0.00 0.00 3.60
3361 4796 5.854866 GTGAAGTATAAGTTTTGGCCGTTTC 59.145 40.000 0.00 0.00 0.00 2.78
3362 4797 5.766174 TGAAGTATAAGTTTTGGCCGTTTCT 59.234 36.000 0.00 0.00 0.00 2.52
3363 4798 6.935771 TGAAGTATAAGTTTTGGCCGTTTCTA 59.064 34.615 0.00 0.00 0.00 2.10
3364 4799 6.980051 AGTATAAGTTTTGGCCGTTTCTAG 57.020 37.500 0.00 0.00 0.00 2.43
3365 4800 4.696899 ATAAGTTTTGGCCGTTTCTAGC 57.303 40.909 0.00 0.00 0.00 3.42
3370 4805 4.029287 GGCCGTTTCTAGCCGATC 57.971 61.111 0.00 0.00 39.87 3.69
3371 4806 1.594564 GGCCGTTTCTAGCCGATCC 60.595 63.158 0.00 0.00 39.87 3.36
3372 4807 1.594564 GCCGTTTCTAGCCGATCCC 60.595 63.158 0.00 0.00 0.00 3.85
3373 4808 1.069258 CCGTTTCTAGCCGATCCCC 59.931 63.158 0.00 0.00 0.00 4.81
3374 4809 1.400530 CCGTTTCTAGCCGATCCCCT 61.401 60.000 0.00 0.00 0.00 4.79
3375 4810 1.325355 CGTTTCTAGCCGATCCCCTA 58.675 55.000 0.00 0.00 0.00 3.53
3376 4811 1.684983 CGTTTCTAGCCGATCCCCTAA 59.315 52.381 0.00 0.00 0.00 2.69
3377 4812 2.101917 CGTTTCTAGCCGATCCCCTAAA 59.898 50.000 0.00 0.00 0.00 1.85
3378 4813 3.464907 GTTTCTAGCCGATCCCCTAAAC 58.535 50.000 0.00 0.00 0.00 2.01
3379 4814 2.769602 TCTAGCCGATCCCCTAAACT 57.230 50.000 0.00 0.00 0.00 2.66
3380 4815 3.042059 TCTAGCCGATCCCCTAAACTT 57.958 47.619 0.00 0.00 0.00 2.66
3381 4816 4.188937 TCTAGCCGATCCCCTAAACTTA 57.811 45.455 0.00 0.00 0.00 2.24
3382 4817 4.150359 TCTAGCCGATCCCCTAAACTTAG 58.850 47.826 0.00 0.00 0.00 2.18
3383 4818 2.760581 AGCCGATCCCCTAAACTTAGT 58.239 47.619 0.00 0.00 0.00 2.24
3384 4819 2.434702 AGCCGATCCCCTAAACTTAGTG 59.565 50.000 0.00 0.00 0.00 2.74
3385 4820 2.433239 GCCGATCCCCTAAACTTAGTGA 59.567 50.000 0.00 0.00 0.00 3.41
3386 4821 3.071167 GCCGATCCCCTAAACTTAGTGAT 59.929 47.826 0.00 0.00 0.00 3.06
3387 4822 4.632153 CCGATCCCCTAAACTTAGTGATG 58.368 47.826 0.00 0.00 0.00 3.07
3388 4823 4.101119 CCGATCCCCTAAACTTAGTGATGT 59.899 45.833 0.00 0.00 0.00 3.06
3389 4824 5.303589 CCGATCCCCTAAACTTAGTGATGTA 59.696 44.000 0.00 0.00 0.00 2.29
3390 4825 6.183360 CCGATCCCCTAAACTTAGTGATGTAA 60.183 42.308 0.00 0.00 0.00 2.41
3391 4826 7.442656 CGATCCCCTAAACTTAGTGATGTAAT 58.557 38.462 0.00 0.00 0.00 1.89
3392 4827 7.931948 CGATCCCCTAAACTTAGTGATGTAATT 59.068 37.037 0.00 0.00 0.00 1.40
3420 4855 7.528481 TTTTCATTTGCATCACATATTCAGC 57.472 32.000 0.00 0.00 0.00 4.26
3421 4856 5.190992 TCATTTGCATCACATATTCAGCC 57.809 39.130 0.00 0.00 0.00 4.85
3422 4857 3.696281 TTTGCATCACATATTCAGCCG 57.304 42.857 0.00 0.00 0.00 5.52
3423 4858 2.330440 TGCATCACATATTCAGCCGT 57.670 45.000 0.00 0.00 0.00 5.68
3424 4859 1.941975 TGCATCACATATTCAGCCGTG 59.058 47.619 0.00 0.00 0.00 4.94
3425 4860 1.265095 GCATCACATATTCAGCCGTGG 59.735 52.381 0.00 0.00 0.00 4.94
3426 4861 2.837498 CATCACATATTCAGCCGTGGA 58.163 47.619 0.00 0.00 0.00 4.02
3427 4862 3.205338 CATCACATATTCAGCCGTGGAA 58.795 45.455 0.00 0.00 0.00 3.53
3428 4863 3.342377 TCACATATTCAGCCGTGGAAA 57.658 42.857 0.00 0.00 0.00 3.13
3429 4864 3.006940 TCACATATTCAGCCGTGGAAAC 58.993 45.455 0.00 0.00 0.00 2.78
3430 4865 2.746904 CACATATTCAGCCGTGGAAACA 59.253 45.455 0.00 0.00 38.70 2.83
3469 4904 8.653984 TTTTCTATTTCATTCAACGACATTCG 57.346 30.769 0.00 0.00 46.93 3.34
3470 4905 7.589574 TTCTATTTCATTCAACGACATTCGA 57.410 32.000 1.94 0.00 43.74 3.71
3471 4906 7.221828 TCTATTTCATTCAACGACATTCGAG 57.778 36.000 1.94 0.00 43.74 4.04
3472 4907 5.862924 ATTTCATTCAACGACATTCGAGT 57.137 34.783 1.94 0.00 43.74 4.18
3473 4908 6.961359 ATTTCATTCAACGACATTCGAGTA 57.039 33.333 1.94 0.00 43.74 2.59
3474 4909 6.961359 TTTCATTCAACGACATTCGAGTAT 57.039 33.333 1.94 0.00 43.74 2.12
3475 4910 8.642908 ATTTCATTCAACGACATTCGAGTATA 57.357 30.769 1.94 0.00 43.74 1.47
3476 4911 8.642908 TTTCATTCAACGACATTCGAGTATAT 57.357 30.769 1.94 0.00 43.74 0.86
3477 4912 9.738832 TTTCATTCAACGACATTCGAGTATATA 57.261 29.630 1.94 0.00 43.74 0.86
3478 4913 9.738832 TTCATTCAACGACATTCGAGTATATAA 57.261 29.630 1.94 0.00 43.74 0.98
3479 4914 9.908152 TCATTCAACGACATTCGAGTATATAAT 57.092 29.630 1.94 0.00 43.74 1.28
3482 4917 9.738832 TTCAACGACATTCGAGTATATAATTCA 57.261 29.630 1.94 0.00 43.74 2.57
3483 4918 9.908152 TCAACGACATTCGAGTATATAATTCAT 57.092 29.630 1.94 0.00 43.74 2.57
3485 4920 9.908152 AACGACATTCGAGTATATAATTCATCA 57.092 29.630 1.94 0.00 43.74 3.07
3486 4921 9.908152 ACGACATTCGAGTATATAATTCATCAA 57.092 29.630 1.94 0.00 43.74 2.57
3494 4929 9.892987 CGAGTATATAATTCATCAATTCTTCGC 57.107 33.333 0.00 0.00 33.95 4.70
3496 4931 9.725019 AGTATATAATTCATCAATTCTTCGCCA 57.275 29.630 0.00 0.00 33.95 5.69
3497 4932 9.760660 GTATATAATTCATCAATTCTTCGCCAC 57.239 33.333 0.00 0.00 33.95 5.01
3498 4933 6.698008 ATAATTCATCAATTCTTCGCCACA 57.302 33.333 0.00 0.00 33.95 4.17
3499 4934 5.389859 AATTCATCAATTCTTCGCCACAA 57.610 34.783 0.00 0.00 0.00 3.33
3500 4935 4.424061 TTCATCAATTCTTCGCCACAAG 57.576 40.909 0.00 0.00 0.00 3.16
3501 4936 3.673902 TCATCAATTCTTCGCCACAAGA 58.326 40.909 0.00 0.00 0.00 3.02
3502 4937 3.436704 TCATCAATTCTTCGCCACAAGAC 59.563 43.478 0.00 0.00 31.88 3.01
3503 4938 2.844946 TCAATTCTTCGCCACAAGACA 58.155 42.857 0.00 0.00 31.88 3.41
3504 4939 3.210227 TCAATTCTTCGCCACAAGACAA 58.790 40.909 0.00 0.00 31.88 3.18
3505 4940 3.629855 TCAATTCTTCGCCACAAGACAAA 59.370 39.130 0.00 0.00 31.88 2.83
3506 4941 3.904136 ATTCTTCGCCACAAGACAAAG 57.096 42.857 0.00 0.00 31.88 2.77
3507 4942 2.613026 TCTTCGCCACAAGACAAAGA 57.387 45.000 0.00 0.00 0.00 2.52
3508 4943 2.210116 TCTTCGCCACAAGACAAAGAC 58.790 47.619 0.00 0.00 0.00 3.01
3509 4944 1.264288 CTTCGCCACAAGACAAAGACC 59.736 52.381 0.00 0.00 0.00 3.85
3510 4945 0.179234 TCGCCACAAGACAAAGACCA 59.821 50.000 0.00 0.00 0.00 4.02
3511 4946 1.021202 CGCCACAAGACAAAGACCAA 58.979 50.000 0.00 0.00 0.00 3.67
3512 4947 1.403679 CGCCACAAGACAAAGACCAAA 59.596 47.619 0.00 0.00 0.00 3.28
3513 4948 2.541588 CGCCACAAGACAAAGACCAAAG 60.542 50.000 0.00 0.00 0.00 2.77
3514 4949 2.687935 GCCACAAGACAAAGACCAAAGA 59.312 45.455 0.00 0.00 0.00 2.52
3515 4950 3.130340 GCCACAAGACAAAGACCAAAGAA 59.870 43.478 0.00 0.00 0.00 2.52
3516 4951 4.381505 GCCACAAGACAAAGACCAAAGAAA 60.382 41.667 0.00 0.00 0.00 2.52
3517 4952 5.719173 CCACAAGACAAAGACCAAAGAAAA 58.281 37.500 0.00 0.00 0.00 2.29
3518 4953 6.162777 CCACAAGACAAAGACCAAAGAAAAA 58.837 36.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 5.711506 AGAAACAATTGTGGATGCTCATACA 59.288 36.000 12.82 0.00 0.00 2.29
18 19 6.032094 CAGAAACAATTGTGGATGCTCATAC 58.968 40.000 12.82 0.00 0.00 2.39
20 21 5.068234 CAGAAACAATTGTGGATGCTCAT 57.932 39.130 12.82 0.00 0.00 2.90
74 75 4.081198 GGTTTTATCATGCCCCAATGTCAA 60.081 41.667 0.00 0.00 0.00 3.18
88 89 4.792068 CTCCCATGGCTTAGGTTTTATCA 58.208 43.478 6.09 0.00 0.00 2.15
94 95 0.929244 ATGCTCCCATGGCTTAGGTT 59.071 50.000 6.09 0.00 0.00 3.50
178 182 2.417379 CCTCGAGACGACCACATGAATT 60.417 50.000 15.71 0.00 0.00 2.17
223 227 4.015872 AGTCTCCAACCGATTTTTAGCA 57.984 40.909 0.00 0.00 0.00 3.49
231 235 0.831307 GGCCTTAGTCTCCAACCGAT 59.169 55.000 0.00 0.00 0.00 4.18
400 404 1.062886 AGAATCGGACATCCCCTCAGA 60.063 52.381 0.00 0.00 0.00 3.27
508 516 6.542852 CATACAACAAAGACATAACCTTCCG 58.457 40.000 0.00 0.00 0.00 4.30
602 610 7.427895 TCACGCATTTAAAATATGTTCATCACG 59.572 33.333 0.00 0.00 0.00 4.35
604 612 9.071221 GTTCACGCATTTAAAATATGTTCATCA 57.929 29.630 0.00 0.00 0.00 3.07
624 632 5.851177 GGTGACATTTAGAACAATGTTCACG 59.149 40.000 25.63 12.23 45.55 4.35
632 640 6.545666 AGACATGTTGGTGACATTTAGAACAA 59.454 34.615 0.00 0.00 46.80 2.83
634 642 6.560253 AGACATGTTGGTGACATTTAGAAC 57.440 37.500 0.00 0.00 46.80 3.01
637 645 4.929211 TCGAGACATGTTGGTGACATTTAG 59.071 41.667 0.00 0.00 46.80 1.85
639 647 3.738982 TCGAGACATGTTGGTGACATTT 58.261 40.909 0.00 0.00 46.80 2.32
642 650 1.000843 CCTCGAGACATGTTGGTGACA 59.999 52.381 15.71 0.00 43.71 3.58
643 651 1.000955 ACCTCGAGACATGTTGGTGAC 59.999 52.381 15.71 0.00 0.00 3.67
644 652 1.338107 ACCTCGAGACATGTTGGTGA 58.662 50.000 15.71 0.00 0.00 4.02
645 653 2.417379 CCTACCTCGAGACATGTTGGTG 60.417 54.545 15.71 0.00 0.00 4.17
646 654 1.825474 CCTACCTCGAGACATGTTGGT 59.175 52.381 15.71 3.74 0.00 3.67
647 655 1.471676 GCCTACCTCGAGACATGTTGG 60.472 57.143 15.71 14.02 0.00 3.77
648 656 1.471676 GGCCTACCTCGAGACATGTTG 60.472 57.143 15.71 4.05 0.00 3.33
650 658 1.384989 CGGCCTACCTCGAGACATGT 61.385 60.000 15.71 0.00 0.00 3.21
651 659 1.360551 CGGCCTACCTCGAGACATG 59.639 63.158 15.71 0.00 0.00 3.21
658 1600 1.296056 CCAACAAACGGCCTACCTCG 61.296 60.000 0.00 0.00 0.00 4.63
706 1936 8.573885 GGCTAGAATACAACAAAAACTTAACCT 58.426 33.333 0.00 0.00 0.00 3.50
774 2049 1.667724 CAGAGTTAGGCCGCAAATGAG 59.332 52.381 0.00 0.00 0.00 2.90
787 2062 2.185387 GTTGGCTAGGGTCCAGAGTTA 58.815 52.381 0.00 0.00 34.66 2.24
795 2070 0.181350 CATGAGGGTTGGCTAGGGTC 59.819 60.000 0.00 0.00 0.00 4.46
803 2078 2.757099 GCCTGCCATGAGGGTTGG 60.757 66.667 0.00 0.00 39.65 3.77
809 2084 1.186917 TTTGTTGGGCCTGCCATGAG 61.187 55.000 10.86 0.00 37.98 2.90
810 2085 0.762082 TTTTGTTGGGCCTGCCATGA 60.762 50.000 10.86 0.00 37.98 3.07
815 2090 1.013596 GTTGTTTTTGTTGGGCCTGC 58.986 50.000 4.53 0.00 0.00 4.85
831 2107 0.036306 ACTGGGCTAGGTTTCCGTTG 59.964 55.000 2.02 0.00 0.00 4.10
836 2112 1.138266 TGCGATACTGGGCTAGGTTTC 59.862 52.381 2.02 0.00 0.00 2.78
957 2234 4.527583 CTCTCCCTGCGGCTCTGC 62.528 72.222 0.00 0.00 0.00 4.26
958 2235 2.295472 CTTCTCTCCCTGCGGCTCTG 62.295 65.000 0.00 0.00 0.00 3.35
959 2236 2.038007 TTCTCTCCCTGCGGCTCT 59.962 61.111 0.00 0.00 0.00 4.09
960 2237 2.498726 CTTCTCTCCCTGCGGCTC 59.501 66.667 0.00 0.00 0.00 4.70
1053 2333 0.035739 TGTACCCCTTCTTGCGGAAC 59.964 55.000 0.00 0.00 0.00 3.62
1261 2564 0.322322 ATCTAACAAACCCGACGGCA 59.678 50.000 8.86 0.00 0.00 5.69
1263 2566 2.268298 CAGATCTAACAAACCCGACGG 58.732 52.381 6.99 6.99 0.00 4.79
1318 2621 2.753452 TCTTCGGCAGATTTACGAGTCT 59.247 45.455 0.00 0.00 37.95 3.24
1336 2647 7.631933 AGAGATTTGGTGATCTTCAGAATCTT 58.368 34.615 16.59 10.46 36.54 2.40
1348 2659 9.965902 ATCAAACTAACTAAGAGATTTGGTGAT 57.034 29.630 0.00 0.00 0.00 3.06
1363 2698 6.398918 AGACTGTATTCGCATCAAACTAACT 58.601 36.000 0.00 0.00 0.00 2.24
1367 2702 5.967088 ACTAGACTGTATTCGCATCAAACT 58.033 37.500 0.00 0.00 0.00 2.66
1399 2734 1.416813 CGAGCACAGCGAGTCATTCC 61.417 60.000 0.00 0.00 0.00 3.01
1400 2735 0.456824 TCGAGCACAGCGAGTCATTC 60.457 55.000 0.00 0.00 33.33 2.67
1405 2740 0.319900 ACAAATCGAGCACAGCGAGT 60.320 50.000 0.00 0.00 41.49 4.18
1406 2741 0.792640 AACAAATCGAGCACAGCGAG 59.207 50.000 0.00 0.00 41.49 5.03
1408 2743 2.537529 CCATAACAAATCGAGCACAGCG 60.538 50.000 0.00 0.00 0.00 5.18
1409 2744 2.223340 CCCATAACAAATCGAGCACAGC 60.223 50.000 0.00 0.00 0.00 4.40
1417 2752 2.684881 AGCAAGCTCCCATAACAAATCG 59.315 45.455 0.00 0.00 0.00 3.34
1429 2764 0.393537 AGGCACACATAGCAAGCTCC 60.394 55.000 0.00 0.00 0.00 4.70
1430 2765 0.731417 CAGGCACACATAGCAAGCTC 59.269 55.000 0.00 0.00 0.00 4.09
1454 2789 2.224378 TGCTCTGAACTCTGAAGGGTTG 60.224 50.000 0.00 0.00 0.00 3.77
1458 2793 1.622811 ACCTGCTCTGAACTCTGAAGG 59.377 52.381 3.87 3.87 31.82 3.46
1460 2795 2.700371 TGAACCTGCTCTGAACTCTGAA 59.300 45.455 0.00 0.00 0.00 3.02
1461 2796 2.319844 TGAACCTGCTCTGAACTCTGA 58.680 47.619 0.00 0.00 0.00 3.27
1462 2797 2.827800 TGAACCTGCTCTGAACTCTG 57.172 50.000 0.00 0.00 0.00 3.35
1463 2798 4.469227 ACATATGAACCTGCTCTGAACTCT 59.531 41.667 10.38 0.00 0.00 3.24
1464 2799 4.764172 ACATATGAACCTGCTCTGAACTC 58.236 43.478 10.38 0.00 0.00 3.01
1465 2800 4.833478 ACATATGAACCTGCTCTGAACT 57.167 40.909 10.38 0.00 0.00 3.01
1466 2801 4.697352 ACAACATATGAACCTGCTCTGAAC 59.303 41.667 10.38 0.00 0.00 3.18
1476 2811 6.987992 TCGATAAGGGTAACAACATATGAACC 59.012 38.462 10.38 8.28 37.67 3.62
1493 2828 5.812642 ACAGTAAGCAAGACAATCGATAAGG 59.187 40.000 0.00 0.00 0.00 2.69
1499 2834 3.990469 AGTGACAGTAAGCAAGACAATCG 59.010 43.478 0.00 0.00 0.00 3.34
1500 2835 4.377841 GCAGTGACAGTAAGCAAGACAATC 60.378 45.833 0.00 0.00 0.00 2.67
1518 2853 2.929960 CTTGCAGATTGACAAGCAGTG 58.070 47.619 6.17 0.00 37.11 3.66
1523 2858 5.752892 ATCTATGCTTGCAGATTGACAAG 57.247 39.130 0.87 0.00 44.88 3.16
1532 2867 6.482641 ACAGAAATGTCTATCTATGCTTGCAG 59.517 38.462 0.87 0.00 30.85 4.41
1544 2879 9.632638 AATGCAGGTAATTACAGAAATGTCTAT 57.367 29.630 17.16 2.93 30.85 1.98
1547 2882 7.761409 TCAATGCAGGTAATTACAGAAATGTC 58.239 34.615 17.16 0.00 0.00 3.06
1569 2904 3.433343 ACATCACAGGGCATCAAATCAA 58.567 40.909 0.00 0.00 0.00 2.57
1580 2915 3.949754 AGATGCAACATAACATCACAGGG 59.050 43.478 5.84 0.00 44.16 4.45
1586 2921 6.916387 CCATTCTCAAGATGCAACATAACATC 59.084 38.462 0.00 0.00 42.45 3.06
1595 2930 4.773674 ACCAAATCCATTCTCAAGATGCAA 59.226 37.500 0.00 0.00 0.00 4.08
1646 2981 8.796475 GGGCATATGTAATTGAACAGTGATAAT 58.204 33.333 4.29 0.00 31.70 1.28
1647 2982 7.998383 AGGGCATATGTAATTGAACAGTGATAA 59.002 33.333 4.29 0.00 31.70 1.75
1648 2983 7.517320 AGGGCATATGTAATTGAACAGTGATA 58.483 34.615 4.29 0.00 31.70 2.15
1649 2984 6.367983 AGGGCATATGTAATTGAACAGTGAT 58.632 36.000 4.29 0.00 31.70 3.06
1650 2985 5.754782 AGGGCATATGTAATTGAACAGTGA 58.245 37.500 4.29 0.00 31.70 3.41
1651 2986 6.205464 CCTAGGGCATATGTAATTGAACAGTG 59.795 42.308 0.00 0.00 31.70 3.66
1652 2987 6.299141 CCTAGGGCATATGTAATTGAACAGT 58.701 40.000 0.00 0.00 31.70 3.55
1653 2988 6.808008 CCTAGGGCATATGTAATTGAACAG 57.192 41.667 0.00 0.00 31.70 3.16
1883 3220 7.926674 TTCCATATGCAGACACATTATATGG 57.073 36.000 12.95 12.95 46.18 2.74
1887 3224 5.184479 GGCATTCCATATGCAGACACATTAT 59.816 40.000 11.39 0.00 46.21 1.28
1906 3243 6.438425 AGGACAAATTAGATGAAACAGGCATT 59.562 34.615 0.00 0.00 0.00 3.56
1925 3272 6.350361 CCATGAAATGCATCAAACTAGGACAA 60.350 38.462 0.00 0.00 44.97 3.18
1952 3301 9.525007 CAAACGACTACATATTAGACAAAACAC 57.475 33.333 0.00 0.00 0.00 3.32
1987 3337 6.051717 AGTAGCACACAAAGATTAGCTATGG 58.948 40.000 0.00 0.00 37.00 2.74
2103 3493 8.370182 AGACAAGGAAATGCAGAAACAATATTT 58.630 29.630 0.00 0.00 0.00 1.40
2110 3500 4.574599 ACAGACAAGGAAATGCAGAAAC 57.425 40.909 0.00 0.00 0.00 2.78
2186 3577 6.185511 ACATAGTCCAGCACTACACTTACTA 58.814 40.000 0.00 0.00 40.60 1.82
2192 3584 3.446161 TGGTACATAGTCCAGCACTACAC 59.554 47.826 0.00 0.00 40.60 2.90
2203 3595 7.108841 TCTATGAAACCACTGGTACATAGTC 57.891 40.000 29.99 14.46 44.05 2.59
2212 3604 6.878923 TGTAAAGACATCTATGAAACCACTGG 59.121 38.462 0.00 0.00 0.00 4.00
2394 3795 2.887568 GTGCTGATGACCTCGCCG 60.888 66.667 0.00 0.00 0.00 6.46
2439 3840 1.682344 GCCCTCAACCATGAACCCC 60.682 63.158 0.00 0.00 34.49 4.95
2451 3852 2.606213 TCGATGGTGGTGCCCTCA 60.606 61.111 0.00 0.00 36.04 3.86
2542 3946 2.645838 AAGAACTGGCTCAAGCTTCA 57.354 45.000 0.00 0.00 41.70 3.02
2705 4109 0.825425 TGCCCAATCGACCAAAAGCA 60.825 50.000 0.00 0.00 0.00 3.91
2715 4119 3.652274 AGAACAAACAATTGCCCAATCG 58.348 40.909 5.05 0.00 40.34 3.34
2739 4143 4.283467 TCTGCAGCTACTCAAAAGGAACTA 59.717 41.667 9.47 0.00 38.49 2.24
2765 4169 0.368227 CAGAAACTCATCGCTCGTGC 59.632 55.000 0.00 0.00 0.00 5.34
2777 4181 3.632145 ACAAAGGAATTGCGTCAGAAACT 59.368 39.130 0.00 0.00 43.13 2.66
2778 4182 3.964909 ACAAAGGAATTGCGTCAGAAAC 58.035 40.909 0.00 0.00 43.13 2.78
2783 4187 2.881513 TGCTTACAAAGGAATTGCGTCA 59.118 40.909 0.00 0.00 43.13 4.35
2784 4188 3.552604 TGCTTACAAAGGAATTGCGTC 57.447 42.857 0.00 0.00 43.13 5.19
2788 4192 3.676646 GCTGCTTGCTTACAAAGGAATTG 59.323 43.478 0.00 0.00 38.20 2.32
2813 4217 6.615316 TCACATAGAAATTGGTATCCCTCTCA 59.385 38.462 0.00 0.00 0.00 3.27
2818 4222 7.013369 GTCCTTTCACATAGAAATTGGTATCCC 59.987 40.741 0.00 0.00 44.75 3.85
2820 4224 8.506168 TGTCCTTTCACATAGAAATTGGTATC 57.494 34.615 0.00 0.00 44.75 2.24
2828 4233 7.174413 TCATTGGATGTCCTTTCACATAGAAA 58.826 34.615 0.09 0.00 43.71 2.52
2829 4234 6.720309 TCATTGGATGTCCTTTCACATAGAA 58.280 36.000 0.09 0.00 37.11 2.10
2848 4267 5.050499 CGCTTAGGAGCTGTAGATTTCATTG 60.050 44.000 0.00 0.00 46.96 2.82
2856 4275 0.741326 CTGCGCTTAGGAGCTGTAGA 59.259 55.000 9.73 0.00 46.96 2.59
2873 4292 3.440173 ACGTGTTCCAGCCATTTTATCTG 59.560 43.478 0.00 0.00 0.00 2.90
2874 4293 3.440173 CACGTGTTCCAGCCATTTTATCT 59.560 43.478 7.58 0.00 0.00 1.98
2913 4332 2.268298 CCGCGGTACTCCATATATTGC 58.732 52.381 19.50 0.00 0.00 3.56
2916 4335 3.159472 TGAACCGCGGTACTCCATATAT 58.841 45.455 34.44 12.08 0.00 0.86
2917 4336 2.555325 CTGAACCGCGGTACTCCATATA 59.445 50.000 34.44 8.97 0.00 0.86
2994 4429 2.223294 ACGCTCTACTTAGATGCGACAC 60.223 50.000 24.28 0.00 44.70 3.67
2996 4431 2.759538 ACGCTCTACTTAGATGCGAC 57.240 50.000 24.28 1.18 44.70 5.19
3020 4455 9.646427 TTTTGTTTATCCATGGCTGTTTTATAC 57.354 29.630 6.96 0.00 0.00 1.47
3047 4482 4.014406 CCCTTAGCAAGTCCCGTATTTTT 58.986 43.478 0.00 0.00 0.00 1.94
3048 4483 3.009805 ACCCTTAGCAAGTCCCGTATTTT 59.990 43.478 0.00 0.00 0.00 1.82
3049 4484 2.574824 ACCCTTAGCAAGTCCCGTATTT 59.425 45.455 0.00 0.00 0.00 1.40
3050 4485 2.193993 ACCCTTAGCAAGTCCCGTATT 58.806 47.619 0.00 0.00 0.00 1.89
3051 4486 1.875488 ACCCTTAGCAAGTCCCGTAT 58.125 50.000 0.00 0.00 0.00 3.06
3052 4487 2.530460 TACCCTTAGCAAGTCCCGTA 57.470 50.000 0.00 0.00 0.00 4.02
3053 4488 1.553704 CTTACCCTTAGCAAGTCCCGT 59.446 52.381 0.00 0.00 0.00 5.28
3054 4489 1.553704 ACTTACCCTTAGCAAGTCCCG 59.446 52.381 0.00 0.00 0.00 5.14
3055 4490 3.008704 TCAACTTACCCTTAGCAAGTCCC 59.991 47.826 0.00 0.00 31.43 4.46
3056 4491 4.001652 GTCAACTTACCCTTAGCAAGTCC 58.998 47.826 0.00 0.00 31.43 3.85
3057 4492 4.691216 CAGTCAACTTACCCTTAGCAAGTC 59.309 45.833 0.00 0.00 31.43 3.01
3058 4493 4.347000 TCAGTCAACTTACCCTTAGCAAGT 59.653 41.667 0.00 0.00 34.03 3.16
3059 4494 4.894784 TCAGTCAACTTACCCTTAGCAAG 58.105 43.478 0.00 0.00 0.00 4.01
3060 4495 4.967084 TCAGTCAACTTACCCTTAGCAA 57.033 40.909 0.00 0.00 0.00 3.91
3061 4496 4.967084 TTCAGTCAACTTACCCTTAGCA 57.033 40.909 0.00 0.00 0.00 3.49
3062 4497 6.819397 ATTTTCAGTCAACTTACCCTTAGC 57.181 37.500 0.00 0.00 0.00 3.09
3063 4498 8.391075 TGAATTTTCAGTCAACTTACCCTTAG 57.609 34.615 0.00 0.00 32.50 2.18
3064 4499 8.754991 TTGAATTTTCAGTCAACTTACCCTTA 57.245 30.769 0.00 0.00 38.61 2.69
3065 4500 7.654022 TTGAATTTTCAGTCAACTTACCCTT 57.346 32.000 0.00 0.00 38.61 3.95
3066 4501 7.839680 ATTGAATTTTCAGTCAACTTACCCT 57.160 32.000 0.00 0.00 39.71 4.34
3067 4502 9.974980 TTTATTGAATTTTCAGTCAACTTACCC 57.025 29.630 0.00 0.00 39.71 3.69
3072 4507 9.546428 CCCTTTTTATTGAATTTTCAGTCAACT 57.454 29.630 0.00 0.00 39.71 3.16
3073 4508 9.541143 TCCCTTTTTATTGAATTTTCAGTCAAC 57.459 29.630 0.00 0.00 39.71 3.18
3075 4510 9.927668 GATCCCTTTTTATTGAATTTTCAGTCA 57.072 29.630 0.00 0.00 38.61 3.41
3076 4511 9.927668 TGATCCCTTTTTATTGAATTTTCAGTC 57.072 29.630 0.00 0.00 38.61 3.51
3077 4512 9.933723 CTGATCCCTTTTTATTGAATTTTCAGT 57.066 29.630 0.00 0.00 38.61 3.41
3084 4519 9.498039 AGGAATTCTGATCCCTTTTTATTGAAT 57.502 29.630 5.23 0.00 37.71 2.57
3085 4520 8.899887 AGGAATTCTGATCCCTTTTTATTGAA 57.100 30.769 5.23 0.00 37.71 2.69
3086 4521 8.899887 AAGGAATTCTGATCCCTTTTTATTGA 57.100 30.769 5.23 0.00 35.64 2.57
3087 4522 8.752187 TGAAGGAATTCTGATCCCTTTTTATTG 58.248 33.333 5.23 0.00 38.97 1.90
3088 4523 8.899887 TGAAGGAATTCTGATCCCTTTTTATT 57.100 30.769 5.23 0.00 38.97 1.40
3089 4524 8.753133 GTTGAAGGAATTCTGATCCCTTTTTAT 58.247 33.333 5.23 0.00 38.97 1.40
3090 4525 7.178451 GGTTGAAGGAATTCTGATCCCTTTTTA 59.822 37.037 5.23 0.00 38.97 1.52
3091 4526 6.014242 GGTTGAAGGAATTCTGATCCCTTTTT 60.014 38.462 5.23 0.00 38.97 1.94
3092 4527 5.481824 GGTTGAAGGAATTCTGATCCCTTTT 59.518 40.000 5.23 0.00 38.97 2.27
3093 4528 5.019470 GGTTGAAGGAATTCTGATCCCTTT 58.981 41.667 5.23 0.00 38.97 3.11
3094 4529 4.293368 AGGTTGAAGGAATTCTGATCCCTT 59.707 41.667 5.23 0.00 41.34 3.95
3095 4530 3.854994 AGGTTGAAGGAATTCTGATCCCT 59.145 43.478 5.23 1.83 37.71 4.20
3096 4531 4.242336 AGGTTGAAGGAATTCTGATCCC 57.758 45.455 5.23 0.00 37.71 3.85
3097 4532 5.256474 TGAAGGTTGAAGGAATTCTGATCC 58.744 41.667 5.23 1.79 37.22 3.36
3098 4533 5.942826 ACTGAAGGTTGAAGGAATTCTGATC 59.057 40.000 5.23 2.45 0.00 2.92
3099 4534 5.885465 ACTGAAGGTTGAAGGAATTCTGAT 58.115 37.500 5.23 0.00 0.00 2.90
3100 4535 5.310409 ACTGAAGGTTGAAGGAATTCTGA 57.690 39.130 5.23 0.00 0.00 3.27
3101 4536 6.712547 AGTAACTGAAGGTTGAAGGAATTCTG 59.287 38.462 5.23 0.00 38.75 3.02
3102 4537 6.842676 AGTAACTGAAGGTTGAAGGAATTCT 58.157 36.000 5.23 0.00 38.75 2.40
3103 4538 7.511959 AAGTAACTGAAGGTTGAAGGAATTC 57.488 36.000 0.00 0.00 38.75 2.17
3104 4539 7.559897 TGAAAGTAACTGAAGGTTGAAGGAATT 59.440 33.333 0.00 0.00 38.75 2.17
3105 4540 7.013369 GTGAAAGTAACTGAAGGTTGAAGGAAT 59.987 37.037 0.00 0.00 38.75 3.01
3106 4541 6.317893 GTGAAAGTAACTGAAGGTTGAAGGAA 59.682 38.462 0.00 0.00 38.75 3.36
3107 4542 5.820947 GTGAAAGTAACTGAAGGTTGAAGGA 59.179 40.000 0.00 0.00 38.75 3.36
3108 4543 5.008712 GGTGAAAGTAACTGAAGGTTGAAGG 59.991 44.000 0.00 0.00 38.75 3.46
3109 4544 5.277345 CGGTGAAAGTAACTGAAGGTTGAAG 60.277 44.000 0.00 0.00 38.75 3.02
3110 4545 4.573201 CGGTGAAAGTAACTGAAGGTTGAA 59.427 41.667 0.00 0.00 38.75 2.69
3111 4546 4.124238 CGGTGAAAGTAACTGAAGGTTGA 58.876 43.478 0.00 0.00 38.75 3.18
3112 4547 3.303791 GCGGTGAAAGTAACTGAAGGTTG 60.304 47.826 0.00 0.00 38.75 3.77
3113 4548 2.876550 GCGGTGAAAGTAACTGAAGGTT 59.123 45.455 0.00 0.00 41.54 3.50
3114 4549 2.490991 GCGGTGAAAGTAACTGAAGGT 58.509 47.619 0.00 0.00 0.00 3.50
3115 4550 1.804748 GGCGGTGAAAGTAACTGAAGG 59.195 52.381 0.00 0.00 0.00 3.46
3116 4551 2.480419 CAGGCGGTGAAAGTAACTGAAG 59.520 50.000 0.00 0.00 0.00 3.02
3117 4552 2.158871 ACAGGCGGTGAAAGTAACTGAA 60.159 45.455 0.00 0.00 0.00 3.02
3118 4553 1.414919 ACAGGCGGTGAAAGTAACTGA 59.585 47.619 0.00 0.00 0.00 3.41
3119 4554 1.878953 ACAGGCGGTGAAAGTAACTG 58.121 50.000 0.00 0.00 0.00 3.16
3161 4596 3.292500 GAAGGCAAGGCAGCAAGGC 62.293 63.158 0.00 0.00 44.61 4.35
3162 4597 2.643232 GGAAGGCAAGGCAGCAAGG 61.643 63.158 0.00 0.00 35.83 3.61
3163 4598 2.968206 GGAAGGCAAGGCAGCAAG 59.032 61.111 0.00 0.00 35.83 4.01
3164 4599 2.985282 CGGAAGGCAAGGCAGCAA 60.985 61.111 0.00 0.00 35.83 3.91
3174 4609 1.332997 CAATGATTGAGAGCGGAAGGC 59.667 52.381 0.00 0.00 44.05 4.35
3175 4610 1.332997 GCAATGATTGAGAGCGGAAGG 59.667 52.381 9.76 0.00 0.00 3.46
3176 4611 1.332997 GGCAATGATTGAGAGCGGAAG 59.667 52.381 9.76 0.00 0.00 3.46
3177 4612 1.382522 GGCAATGATTGAGAGCGGAA 58.617 50.000 9.76 0.00 0.00 4.30
3178 4613 0.464373 GGGCAATGATTGAGAGCGGA 60.464 55.000 9.76 0.00 0.00 5.54
3179 4614 0.749091 TGGGCAATGATTGAGAGCGG 60.749 55.000 9.76 0.00 0.00 5.52
3180 4615 0.379669 GTGGGCAATGATTGAGAGCG 59.620 55.000 9.76 0.00 0.00 5.03
3181 4616 0.379669 CGTGGGCAATGATTGAGAGC 59.620 55.000 9.76 0.00 0.00 4.09
3182 4617 1.019673 CCGTGGGCAATGATTGAGAG 58.980 55.000 9.76 0.00 0.00 3.20
3183 4618 3.173540 CCGTGGGCAATGATTGAGA 57.826 52.632 9.76 0.00 0.00 3.27
3202 4637 1.121407 TAGAGGGATGCCATGGACGG 61.121 60.000 18.40 0.00 0.00 4.79
3203 4638 0.758734 TTAGAGGGATGCCATGGACG 59.241 55.000 18.40 0.00 0.00 4.79
3204 4639 1.202818 GGTTAGAGGGATGCCATGGAC 60.203 57.143 18.40 7.64 0.00 4.02
3205 4640 1.140312 GGTTAGAGGGATGCCATGGA 58.860 55.000 18.40 0.31 0.00 3.41
3206 4641 0.111253 GGGTTAGAGGGATGCCATGG 59.889 60.000 7.63 7.63 0.00 3.66
3207 4642 0.846015 TGGGTTAGAGGGATGCCATG 59.154 55.000 5.86 0.00 0.00 3.66
3208 4643 1.143813 CTGGGTTAGAGGGATGCCAT 58.856 55.000 5.86 0.00 0.00 4.40
3209 4644 0.253160 ACTGGGTTAGAGGGATGCCA 60.253 55.000 5.86 0.00 0.00 4.92
3210 4645 0.181350 CACTGGGTTAGAGGGATGCC 59.819 60.000 0.00 0.00 0.00 4.40
3211 4646 1.204146 TCACTGGGTTAGAGGGATGC 58.796 55.000 0.00 0.00 0.00 3.91
3212 4647 3.713764 AGATTCACTGGGTTAGAGGGATG 59.286 47.826 0.00 0.00 0.00 3.51
3213 4648 3.713764 CAGATTCACTGGGTTAGAGGGAT 59.286 47.826 0.00 0.00 42.39 3.85
3214 4649 3.107601 CAGATTCACTGGGTTAGAGGGA 58.892 50.000 0.00 0.00 42.39 4.20
3215 4650 2.420687 GCAGATTCACTGGGTTAGAGGG 60.421 54.545 0.00 0.00 45.82 4.30
3216 4651 2.237143 TGCAGATTCACTGGGTTAGAGG 59.763 50.000 0.00 0.00 45.82 3.69
3217 4652 3.616956 TGCAGATTCACTGGGTTAGAG 57.383 47.619 0.00 0.00 45.82 2.43
3218 4653 3.519107 TGATGCAGATTCACTGGGTTAGA 59.481 43.478 0.00 0.00 45.82 2.10
3219 4654 3.624861 GTGATGCAGATTCACTGGGTTAG 59.375 47.826 10.94 0.00 45.82 2.34
3220 4655 3.008923 TGTGATGCAGATTCACTGGGTTA 59.991 43.478 17.40 0.00 45.82 2.85
3221 4656 2.224843 TGTGATGCAGATTCACTGGGTT 60.225 45.455 17.40 0.00 45.82 4.11
3222 4657 1.352017 TGTGATGCAGATTCACTGGGT 59.648 47.619 17.40 0.00 45.82 4.51
3223 4658 1.741706 GTGTGATGCAGATTCACTGGG 59.258 52.381 17.40 0.00 45.82 4.45
3224 4659 2.676839 GAGTGTGATGCAGATTCACTGG 59.323 50.000 17.40 0.00 45.82 4.00
3226 4661 3.244318 TGTGAGTGTGATGCAGATTCACT 60.244 43.478 17.40 15.45 43.12 3.41
3227 4662 3.069289 TGTGAGTGTGATGCAGATTCAC 58.931 45.455 11.24 11.24 43.04 3.18
3228 4663 3.069289 GTGTGAGTGTGATGCAGATTCA 58.931 45.455 0.00 0.00 0.00 2.57
3229 4664 2.417933 GGTGTGAGTGTGATGCAGATTC 59.582 50.000 0.00 0.00 0.00 2.52
3230 4665 2.039480 AGGTGTGAGTGTGATGCAGATT 59.961 45.455 0.00 0.00 0.00 2.40
3231 4666 1.627329 AGGTGTGAGTGTGATGCAGAT 59.373 47.619 0.00 0.00 0.00 2.90
3232 4667 1.001293 GAGGTGTGAGTGTGATGCAGA 59.999 52.381 0.00 0.00 0.00 4.26
3233 4668 1.001746 AGAGGTGTGAGTGTGATGCAG 59.998 52.381 0.00 0.00 0.00 4.41
3234 4669 1.051008 AGAGGTGTGAGTGTGATGCA 58.949 50.000 0.00 0.00 0.00 3.96
3235 4670 3.056536 TCTTAGAGGTGTGAGTGTGATGC 60.057 47.826 0.00 0.00 0.00 3.91
3236 4671 4.790765 TCTTAGAGGTGTGAGTGTGATG 57.209 45.455 0.00 0.00 0.00 3.07
3237 4672 7.418368 CCATTATCTTAGAGGTGTGAGTGTGAT 60.418 40.741 0.00 0.00 0.00 3.06
3238 4673 6.127338 CCATTATCTTAGAGGTGTGAGTGTGA 60.127 42.308 0.00 0.00 0.00 3.58
3239 4674 6.045318 CCATTATCTTAGAGGTGTGAGTGTG 58.955 44.000 0.00 0.00 0.00 3.82
3240 4675 5.129485 CCCATTATCTTAGAGGTGTGAGTGT 59.871 44.000 0.00 0.00 0.00 3.55
3241 4676 5.453903 CCCCATTATCTTAGAGGTGTGAGTG 60.454 48.000 0.00 0.00 0.00 3.51
3242 4677 4.656112 CCCCATTATCTTAGAGGTGTGAGT 59.344 45.833 0.00 0.00 0.00 3.41
3243 4678 4.040952 CCCCCATTATCTTAGAGGTGTGAG 59.959 50.000 0.00 0.00 0.00 3.51
3244 4679 3.973973 CCCCCATTATCTTAGAGGTGTGA 59.026 47.826 0.00 0.00 0.00 3.58
3245 4680 3.496870 GCCCCCATTATCTTAGAGGTGTG 60.497 52.174 0.00 0.00 0.00 3.82
3246 4681 2.711547 GCCCCCATTATCTTAGAGGTGT 59.288 50.000 0.00 0.00 0.00 4.16
3247 4682 2.040412 GGCCCCCATTATCTTAGAGGTG 59.960 54.545 0.00 0.00 0.00 4.00
3248 4683 2.349445 GGCCCCCATTATCTTAGAGGT 58.651 52.381 0.00 0.00 0.00 3.85
3249 4684 1.279271 CGGCCCCCATTATCTTAGAGG 59.721 57.143 0.00 0.00 0.00 3.69
3250 4685 1.978580 ACGGCCCCCATTATCTTAGAG 59.021 52.381 0.00 0.00 0.00 2.43
3251 4686 1.975680 GACGGCCCCCATTATCTTAGA 59.024 52.381 0.00 0.00 0.00 2.10
3252 4687 1.978580 AGACGGCCCCCATTATCTTAG 59.021 52.381 0.00 0.00 0.00 2.18
3253 4688 1.975680 GAGACGGCCCCCATTATCTTA 59.024 52.381 0.00 0.00 0.00 2.10
3254 4689 0.765510 GAGACGGCCCCCATTATCTT 59.234 55.000 0.00 0.00 0.00 2.40
3255 4690 0.104934 AGAGACGGCCCCCATTATCT 60.105 55.000 0.00 0.00 0.00 1.98
3256 4691 0.321996 GAGAGACGGCCCCCATTATC 59.678 60.000 0.00 0.00 0.00 1.75
3257 4692 0.104934 AGAGAGACGGCCCCCATTAT 60.105 55.000 0.00 0.00 0.00 1.28
3258 4693 0.759436 GAGAGAGACGGCCCCCATTA 60.759 60.000 0.00 0.00 0.00 1.90
3259 4694 2.041265 AGAGAGACGGCCCCCATT 59.959 61.111 0.00 0.00 0.00 3.16
3260 4695 1.656092 TAGAGAGAGACGGCCCCCAT 61.656 60.000 0.00 0.00 0.00 4.00
3261 4696 1.870941 TTAGAGAGAGACGGCCCCCA 61.871 60.000 0.00 0.00 0.00 4.96
3262 4697 1.076192 TTAGAGAGAGACGGCCCCC 60.076 63.158 0.00 0.00 0.00 5.40
3263 4698 0.106619 TCTTAGAGAGAGACGGCCCC 60.107 60.000 0.00 0.00 0.00 5.80
3264 4699 3.498502 TCTTAGAGAGAGACGGCCC 57.501 57.895 0.00 0.00 0.00 5.80
3272 4707 7.860918 TCGTTTATAGTTGCTCTTAGAGAGA 57.139 36.000 14.14 0.00 45.07 3.10
3273 4708 7.806014 GGATCGTTTATAGTTGCTCTTAGAGAG 59.194 40.741 14.14 5.03 45.04 3.20
3274 4709 7.255520 GGGATCGTTTATAGTTGCTCTTAGAGA 60.256 40.741 14.14 0.00 0.00 3.10
3275 4710 6.864165 GGGATCGTTTATAGTTGCTCTTAGAG 59.136 42.308 4.63 4.63 0.00 2.43
3276 4711 6.550108 AGGGATCGTTTATAGTTGCTCTTAGA 59.450 38.462 0.00 0.00 0.00 2.10
3277 4712 6.750148 AGGGATCGTTTATAGTTGCTCTTAG 58.250 40.000 0.00 0.00 0.00 2.18
3278 4713 6.726490 AGGGATCGTTTATAGTTGCTCTTA 57.274 37.500 0.00 0.00 0.00 2.10
3279 4714 5.615925 AGGGATCGTTTATAGTTGCTCTT 57.384 39.130 0.00 0.00 0.00 2.85
3280 4715 6.726490 TTAGGGATCGTTTATAGTTGCTCT 57.274 37.500 0.00 0.00 0.00 4.09
3281 4716 7.781548 TTTTAGGGATCGTTTATAGTTGCTC 57.218 36.000 0.00 0.00 0.00 4.26
3282 4717 8.747538 ATTTTTAGGGATCGTTTATAGTTGCT 57.252 30.769 0.00 0.00 0.00 3.91
3296 4731 9.350951 CCGTTTTAATCCTCTATTTTTAGGGAT 57.649 33.333 0.00 0.00 38.29 3.85
3297 4732 7.283807 GCCGTTTTAATCCTCTATTTTTAGGGA 59.716 37.037 0.00 0.00 33.40 4.20
3298 4733 7.067737 TGCCGTTTTAATCCTCTATTTTTAGGG 59.932 37.037 0.00 0.00 33.40 3.53
3299 4734 7.992008 TGCCGTTTTAATCCTCTATTTTTAGG 58.008 34.615 0.00 0.00 0.00 2.69
3300 4735 9.849166 TTTGCCGTTTTAATCCTCTATTTTTAG 57.151 29.630 0.00 0.00 0.00 1.85
3301 4736 9.849166 CTTTGCCGTTTTAATCCTCTATTTTTA 57.151 29.630 0.00 0.00 0.00 1.52
3302 4737 8.364894 ACTTTGCCGTTTTAATCCTCTATTTTT 58.635 29.630 0.00 0.00 0.00 1.94
3303 4738 7.892609 ACTTTGCCGTTTTAATCCTCTATTTT 58.107 30.769 0.00 0.00 0.00 1.82
3304 4739 7.462571 ACTTTGCCGTTTTAATCCTCTATTT 57.537 32.000 0.00 0.00 0.00 1.40
3305 4740 8.570068 TTACTTTGCCGTTTTAATCCTCTATT 57.430 30.769 0.00 0.00 0.00 1.73
3306 4741 8.456471 GTTTACTTTGCCGTTTTAATCCTCTAT 58.544 33.333 0.00 0.00 0.00 1.98
3307 4742 7.662669 AGTTTACTTTGCCGTTTTAATCCTCTA 59.337 33.333 0.00 0.00 0.00 2.43
3308 4743 6.489022 AGTTTACTTTGCCGTTTTAATCCTCT 59.511 34.615 0.00 0.00 0.00 3.69
3309 4744 6.675026 AGTTTACTTTGCCGTTTTAATCCTC 58.325 36.000 0.00 0.00 0.00 3.71
3310 4745 6.644248 AGTTTACTTTGCCGTTTTAATCCT 57.356 33.333 0.00 0.00 0.00 3.24
3311 4746 6.919115 TGAAGTTTACTTTGCCGTTTTAATCC 59.081 34.615 0.00 0.00 36.11 3.01
3312 4747 7.646526 ACTGAAGTTTACTTTGCCGTTTTAATC 59.353 33.333 0.00 0.00 36.11 1.75
3313 4748 7.434013 CACTGAAGTTTACTTTGCCGTTTTAAT 59.566 33.333 0.00 0.00 36.11 1.40
3314 4749 6.748198 CACTGAAGTTTACTTTGCCGTTTTAA 59.252 34.615 0.00 0.00 36.11 1.52
3315 4750 6.093771 TCACTGAAGTTTACTTTGCCGTTTTA 59.906 34.615 0.00 0.00 36.11 1.52
3316 4751 5.099575 CACTGAAGTTTACTTTGCCGTTTT 58.900 37.500 0.00 0.00 36.11 2.43
3317 4752 4.396790 TCACTGAAGTTTACTTTGCCGTTT 59.603 37.500 0.00 0.00 36.11 3.60
3318 4753 3.942748 TCACTGAAGTTTACTTTGCCGTT 59.057 39.130 0.00 0.00 36.11 4.44
3319 4754 3.537580 TCACTGAAGTTTACTTTGCCGT 58.462 40.909 0.00 0.00 36.11 5.68
3320 4755 4.527564 CTTCACTGAAGTTTACTTTGCCG 58.472 43.478 10.27 0.00 36.11 5.69
3332 4767 6.612306 GGCCAAAACTTATACTTCACTGAAG 58.388 40.000 16.01 16.01 44.37 3.02
3333 4768 5.180492 CGGCCAAAACTTATACTTCACTGAA 59.820 40.000 2.24 0.00 0.00 3.02
3334 4769 4.693566 CGGCCAAAACTTATACTTCACTGA 59.306 41.667 2.24 0.00 0.00 3.41
3335 4770 4.454504 ACGGCCAAAACTTATACTTCACTG 59.545 41.667 2.24 0.00 0.00 3.66
3336 4771 4.648651 ACGGCCAAAACTTATACTTCACT 58.351 39.130 2.24 0.00 0.00 3.41
3337 4772 5.366829 AACGGCCAAAACTTATACTTCAC 57.633 39.130 2.24 0.00 0.00 3.18
3338 4773 5.766174 AGAAACGGCCAAAACTTATACTTCA 59.234 36.000 2.24 0.00 0.00 3.02
3339 4774 6.250344 AGAAACGGCCAAAACTTATACTTC 57.750 37.500 2.24 0.00 0.00 3.01
3340 4775 6.128090 GCTAGAAACGGCCAAAACTTATACTT 60.128 38.462 2.24 0.00 0.00 2.24
3341 4776 5.353400 GCTAGAAACGGCCAAAACTTATACT 59.647 40.000 2.24 0.00 0.00 2.12
3342 4777 5.448225 GGCTAGAAACGGCCAAAACTTATAC 60.448 44.000 2.24 0.00 46.84 1.47
3343 4778 4.637091 GGCTAGAAACGGCCAAAACTTATA 59.363 41.667 2.24 0.00 46.84 0.98
3344 4779 3.442625 GGCTAGAAACGGCCAAAACTTAT 59.557 43.478 2.24 0.00 46.84 1.73
3345 4780 2.815503 GGCTAGAAACGGCCAAAACTTA 59.184 45.455 2.24 0.00 46.84 2.24
3346 4781 1.611977 GGCTAGAAACGGCCAAAACTT 59.388 47.619 2.24 0.00 46.84 2.66
3347 4782 1.244816 GGCTAGAAACGGCCAAAACT 58.755 50.000 2.24 0.00 46.84 2.66
3348 4783 3.786809 GGCTAGAAACGGCCAAAAC 57.213 52.632 2.24 0.00 46.84 2.43
3353 4788 1.594564 GGATCGGCTAGAAACGGCC 60.595 63.158 0.00 0.00 44.43 6.13
3354 4789 1.594564 GGGATCGGCTAGAAACGGC 60.595 63.158 0.00 0.00 0.00 5.68
3355 4790 1.069258 GGGGATCGGCTAGAAACGG 59.931 63.158 0.00 0.00 0.00 4.44
3356 4791 1.325355 TAGGGGATCGGCTAGAAACG 58.675 55.000 0.00 0.00 0.00 3.60
3357 4792 3.134262 AGTTTAGGGGATCGGCTAGAAAC 59.866 47.826 0.00 0.00 0.00 2.78
3358 4793 3.381335 AGTTTAGGGGATCGGCTAGAAA 58.619 45.455 0.00 0.00 0.00 2.52
3359 4794 3.042059 AGTTTAGGGGATCGGCTAGAA 57.958 47.619 0.00 0.00 0.00 2.10
3360 4795 2.769602 AGTTTAGGGGATCGGCTAGA 57.230 50.000 0.00 0.00 0.00 2.43
3361 4796 3.896272 ACTAAGTTTAGGGGATCGGCTAG 59.104 47.826 4.12 0.00 35.08 3.42
3362 4797 3.640029 CACTAAGTTTAGGGGATCGGCTA 59.360 47.826 4.12 0.00 35.08 3.93
3363 4798 2.434702 CACTAAGTTTAGGGGATCGGCT 59.565 50.000 4.12 0.00 35.08 5.52
3364 4799 2.433239 TCACTAAGTTTAGGGGATCGGC 59.567 50.000 1.57 0.00 34.90 5.54
3365 4800 4.101119 ACATCACTAAGTTTAGGGGATCGG 59.899 45.833 1.57 0.00 34.90 4.18
3366 4801 5.277857 ACATCACTAAGTTTAGGGGATCG 57.722 43.478 1.57 3.90 34.90 3.69
3395 4830 7.064847 GGCTGAATATGTGATGCAAATGAAAAA 59.935 33.333 0.00 0.00 0.00 1.94
3396 4831 6.535865 GGCTGAATATGTGATGCAAATGAAAA 59.464 34.615 0.00 0.00 0.00 2.29
3397 4832 6.044046 GGCTGAATATGTGATGCAAATGAAA 58.956 36.000 0.00 0.00 0.00 2.69
3398 4833 5.593968 GGCTGAATATGTGATGCAAATGAA 58.406 37.500 0.00 0.00 0.00 2.57
3399 4834 4.261280 CGGCTGAATATGTGATGCAAATGA 60.261 41.667 0.00 0.00 0.00 2.57
3400 4835 3.978855 CGGCTGAATATGTGATGCAAATG 59.021 43.478 0.00 0.00 0.00 2.32
3401 4836 3.633525 ACGGCTGAATATGTGATGCAAAT 59.366 39.130 0.00 0.00 0.00 2.32
3402 4837 3.016031 ACGGCTGAATATGTGATGCAAA 58.984 40.909 0.00 0.00 0.00 3.68
3403 4838 2.355444 CACGGCTGAATATGTGATGCAA 59.645 45.455 0.00 0.00 34.29 4.08
3404 4839 1.941975 CACGGCTGAATATGTGATGCA 59.058 47.619 0.00 0.00 34.29 3.96
3405 4840 1.265095 CCACGGCTGAATATGTGATGC 59.735 52.381 0.00 0.00 34.29 3.91
3406 4841 2.837498 TCCACGGCTGAATATGTGATG 58.163 47.619 0.00 0.00 34.29 3.07
3407 4842 3.558931 TTCCACGGCTGAATATGTGAT 57.441 42.857 0.00 0.00 34.29 3.06
3408 4843 3.006940 GTTTCCACGGCTGAATATGTGA 58.993 45.455 0.00 0.00 34.29 3.58
3409 4844 2.746904 TGTTTCCACGGCTGAATATGTG 59.253 45.455 0.00 0.00 0.00 3.21
3410 4845 2.747446 GTGTTTCCACGGCTGAATATGT 59.253 45.455 0.00 0.00 0.00 2.29
3411 4846 2.097466 GGTGTTTCCACGGCTGAATATG 59.903 50.000 0.00 0.00 42.80 1.78
3412 4847 2.026262 AGGTGTTTCCACGGCTGAATAT 60.026 45.455 0.00 0.00 42.80 1.28
3413 4848 1.349688 AGGTGTTTCCACGGCTGAATA 59.650 47.619 0.00 0.00 42.80 1.75
3414 4849 0.110486 AGGTGTTTCCACGGCTGAAT 59.890 50.000 0.00 0.00 42.80 2.57
3415 4850 0.106918 AAGGTGTTTCCACGGCTGAA 60.107 50.000 0.00 0.00 42.80 3.02
3416 4851 0.106918 AAAGGTGTTTCCACGGCTGA 60.107 50.000 0.00 0.00 42.80 4.26
3417 4852 0.744281 AAAAGGTGTTTCCACGGCTG 59.256 50.000 0.00 0.00 42.80 4.85
3418 4853 2.351706 TAAAAGGTGTTTCCACGGCT 57.648 45.000 0.00 0.00 42.80 5.52
3419 4854 3.653539 AATAAAAGGTGTTTCCACGGC 57.346 42.857 0.00 0.00 42.80 5.68
3420 4855 8.596271 AAATAAAATAAAAGGTGTTTCCACGG 57.404 30.769 0.00 0.00 42.80 4.94
3443 4878 9.112789 CGAATGTCGTTGAATGAAATAGAAAAA 57.887 29.630 0.00 0.00 34.72 1.94
3444 4879 8.499967 TCGAATGTCGTTGAATGAAATAGAAAA 58.500 29.630 0.00 0.00 41.35 2.29
3445 4880 8.024146 TCGAATGTCGTTGAATGAAATAGAAA 57.976 30.769 0.00 0.00 41.35 2.52
3446 4881 7.330946 ACTCGAATGTCGTTGAATGAAATAGAA 59.669 33.333 0.00 0.00 41.35 2.10
3447 4882 6.811665 ACTCGAATGTCGTTGAATGAAATAGA 59.188 34.615 0.00 0.00 41.35 1.98
3448 4883 6.993878 ACTCGAATGTCGTTGAATGAAATAG 58.006 36.000 0.00 0.00 41.35 1.73
3449 4884 6.961359 ACTCGAATGTCGTTGAATGAAATA 57.039 33.333 0.00 0.00 41.35 1.40
3450 4885 5.862924 ACTCGAATGTCGTTGAATGAAAT 57.137 34.783 0.00 0.00 41.35 2.17
3451 4886 6.961359 ATACTCGAATGTCGTTGAATGAAA 57.039 33.333 0.00 0.00 41.35 2.69
3452 4887 9.738832 TTATATACTCGAATGTCGTTGAATGAA 57.261 29.630 0.00 0.00 41.35 2.57
3453 4888 9.908152 ATTATATACTCGAATGTCGTTGAATGA 57.092 29.630 0.00 0.00 41.35 2.57
3456 4891 9.738832 TGAATTATATACTCGAATGTCGTTGAA 57.261 29.630 0.00 0.00 41.35 2.69
3457 4892 9.908152 ATGAATTATATACTCGAATGTCGTTGA 57.092 29.630 0.00 0.00 41.35 3.18
3459 4894 9.908152 TGATGAATTATATACTCGAATGTCGTT 57.092 29.630 0.00 0.00 41.35 3.85
3460 4895 9.908152 TTGATGAATTATATACTCGAATGTCGT 57.092 29.630 0.00 0.00 41.35 4.34
3468 4903 9.892987 GCGAAGAATTGATGAATTATATACTCG 57.107 33.333 0.00 0.00 31.58 4.18
3470 4905 9.725019 TGGCGAAGAATTGATGAATTATATACT 57.275 29.630 0.00 0.00 31.58 2.12
3471 4906 9.760660 GTGGCGAAGAATTGATGAATTATATAC 57.239 33.333 0.00 0.00 31.58 1.47
3472 4907 9.500785 TGTGGCGAAGAATTGATGAATTATATA 57.499 29.630 0.00 0.00 31.58 0.86
3473 4908 8.394971 TGTGGCGAAGAATTGATGAATTATAT 57.605 30.769 0.00 0.00 31.58 0.86
3474 4909 7.800155 TGTGGCGAAGAATTGATGAATTATA 57.200 32.000 0.00 0.00 31.58 0.98
3475 4910 6.698008 TGTGGCGAAGAATTGATGAATTAT 57.302 33.333 0.00 0.00 31.58 1.28
3476 4911 6.374053 TCTTGTGGCGAAGAATTGATGAATTA 59.626 34.615 0.00 0.00 31.58 1.40
3477 4912 5.183713 TCTTGTGGCGAAGAATTGATGAATT 59.816 36.000 0.00 0.00 34.29 2.17
3478 4913 4.701651 TCTTGTGGCGAAGAATTGATGAAT 59.298 37.500 0.00 0.00 0.00 2.57
3479 4914 4.071423 TCTTGTGGCGAAGAATTGATGAA 58.929 39.130 0.00 0.00 0.00 2.57
3480 4915 3.436704 GTCTTGTGGCGAAGAATTGATGA 59.563 43.478 0.73 0.00 33.73 2.92
3481 4916 3.189080 TGTCTTGTGGCGAAGAATTGATG 59.811 43.478 0.73 0.00 33.73 3.07
3482 4917 3.411446 TGTCTTGTGGCGAAGAATTGAT 58.589 40.909 0.73 0.00 33.73 2.57
3483 4918 2.844946 TGTCTTGTGGCGAAGAATTGA 58.155 42.857 0.73 0.00 33.73 2.57
3484 4919 3.624326 TTGTCTTGTGGCGAAGAATTG 57.376 42.857 0.73 0.00 33.73 2.32
3485 4920 3.882888 TCTTTGTCTTGTGGCGAAGAATT 59.117 39.130 0.73 0.00 33.73 2.17
3486 4921 3.251004 GTCTTTGTCTTGTGGCGAAGAAT 59.749 43.478 2.37 0.00 37.01 2.40
3487 4922 2.612212 GTCTTTGTCTTGTGGCGAAGAA 59.388 45.455 2.37 0.00 37.01 2.52
3488 4923 2.210116 GTCTTTGTCTTGTGGCGAAGA 58.790 47.619 0.00 0.00 33.95 2.87
3489 4924 1.264288 GGTCTTTGTCTTGTGGCGAAG 59.736 52.381 0.00 0.00 0.00 3.79
3490 4925 1.305201 GGTCTTTGTCTTGTGGCGAA 58.695 50.000 0.00 0.00 0.00 4.70
3491 4926 0.179234 TGGTCTTTGTCTTGTGGCGA 59.821 50.000 0.00 0.00 0.00 5.54
3492 4927 1.021202 TTGGTCTTTGTCTTGTGGCG 58.979 50.000 0.00 0.00 0.00 5.69
3493 4928 2.687935 TCTTTGGTCTTTGTCTTGTGGC 59.312 45.455 0.00 0.00 0.00 5.01
3494 4929 4.981806 TTCTTTGGTCTTTGTCTTGTGG 57.018 40.909 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.