Multiple sequence alignment - TraesCS4D01G338600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G338600 chr4D 100.000 2011 0 0 740 2750 496630764 496632774 0.000000e+00 3714.0
1 TraesCS4D01G338600 chr4D 85.506 1097 148 10 1592 2680 496138847 496137754 0.000000e+00 1134.0
2 TraesCS4D01G338600 chr4D 100.000 587 0 0 3081 3667 496633105 496633691 0.000000e+00 1085.0
3 TraesCS4D01G338600 chr4D 100.000 456 0 0 1 456 496630025 496630480 0.000000e+00 843.0
4 TraesCS4D01G338600 chr4D 92.825 446 31 1 2235 2680 496336589 496336145 0.000000e+00 645.0
5 TraesCS4D01G338600 chr4D 95.107 327 16 0 3325 3651 434550240 434550566 1.950000e-142 516.0
6 TraesCS4D01G338600 chr4D 79.394 660 118 14 1591 2236 496347906 496347251 2.010000e-122 449.0
7 TraesCS4D01G338600 chr4D 79.389 524 75 24 970 1479 496139446 496138942 4.540000e-89 339.0
8 TraesCS4D01G338600 chr4D 77.354 393 58 22 994 1376 496349712 496349341 1.730000e-48 204.0
9 TraesCS4D01G338600 chr4B 94.415 1898 76 12 790 2678 636611353 636609477 0.000000e+00 2891.0
10 TraesCS4D01G338600 chr4B 92.094 468 37 0 2213 2680 636066687 636067154 0.000000e+00 660.0
11 TraesCS4D01G338600 chr4B 80.410 536 68 22 970 1483 636065573 636066093 1.240000e-99 374.0
12 TraesCS4D01G338600 chr4B 91.282 195 5 1 253 435 636619262 636619068 4.700000e-64 255.0
13 TraesCS4D01G338600 chr4B 88.000 75 3 3 3173 3245 636609427 636609357 2.350000e-12 84.2
14 TraesCS4D01G338600 chr5A 93.001 1986 87 26 740 2685 675672364 675670391 0.000000e+00 2850.0
15 TraesCS4D01G338600 chr5A 85.195 1101 148 12 1592 2680 675631079 675629982 0.000000e+00 1116.0
16 TraesCS4D01G338600 chr5A 87.250 400 36 10 1 389 675674659 675674264 3.360000e-120 442.0
17 TraesCS4D01G338600 chr5A 81.179 526 61 22 970 1481 675631656 675631155 4.440000e-104 388.0
18 TraesCS4D01G338600 chr5A 90.338 207 16 4 187 389 675673026 675672820 6.040000e-68 268.0
19 TraesCS4D01G338600 chr5A 97.059 34 1 0 2335 2368 675670796 675670763 1.420000e-04 58.4
20 TraesCS4D01G338600 chr2D 96.562 320 11 0 3325 3644 607841157 607841476 6.970000e-147 531.0
21 TraesCS4D01G338600 chr2D 94.345 336 19 0 3325 3660 32946487 32946152 1.950000e-142 516.0
22 TraesCS4D01G338600 chr7D 96.552 319 11 0 3325 3643 525809717 525810035 2.510000e-146 529.0
23 TraesCS4D01G338600 chr7D 86.058 208 29 0 1243 1450 573924031 573924238 1.330000e-54 224.0
24 TraesCS4D01G338600 chr5D 96.250 320 12 0 3325 3644 40193022 40192703 3.240000e-145 525.0
25 TraesCS4D01G338600 chr5D 96.238 319 12 0 3325 3643 425709413 425709731 1.170000e-144 523.0
26 TraesCS4D01G338600 chr5D 78.462 130 19 5 3164 3286 519200541 519200414 3.930000e-10 76.8
27 TraesCS4D01G338600 chr3D 96.238 319 12 0 3325 3643 531546202 531545884 1.170000e-144 523.0
28 TraesCS4D01G338600 chr3D 95.399 326 15 0 3325 3650 464791662 464791987 1.510000e-143 520.0
29 TraesCS4D01G338600 chr3D 88.525 61 5 1 3161 3219 581868018 581867958 5.080000e-09 73.1
30 TraesCS4D01G338600 chr5B 95.427 328 14 1 3325 3651 274398835 274398508 4.200000e-144 521.0
31 TraesCS4D01G338600 chr5B 94.595 37 2 0 258 294 548733998 548734034 1.420000e-04 58.4
32 TraesCS4D01G338600 chr7B 84.541 207 32 0 1253 1459 633218427 633218221 4.800000e-49 206.0
33 TraesCS4D01G338600 chr7B 85.897 78 5 3 3163 3237 126123416 126123342 1.090000e-10 78.7
34 TraesCS4D01G338600 chr2A 82.677 127 16 6 3157 3281 44721604 44721482 1.390000e-19 108.0
35 TraesCS4D01G338600 chrUn 90.909 66 4 1 3159 3222 88224503 88224438 1.810000e-13 87.9
36 TraesCS4D01G338600 chr4A 79.104 134 19 5 3160 3286 696104963 696105094 2.350000e-12 84.2
37 TraesCS4D01G338600 chr6D 84.146 82 7 4 3163 3242 115578176 115578253 1.410000e-09 75.0
38 TraesCS4D01G338600 chr2B 89.831 59 3 2 3163 3219 132829321 132829378 5.080000e-09 73.1
39 TraesCS4D01G338600 chr6B 90.000 50 5 0 3226 3275 478393635 478393586 8.500000e-07 65.8
40 TraesCS4D01G338600 chr1A 90.909 44 4 0 3232 3275 473851650 473851607 3.950000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G338600 chr4D 496630025 496633691 3666 False 1880.666667 3714 100.0000 1 3667 3 chr4D.!!$F2 3666
1 TraesCS4D01G338600 chr4D 496137754 496139446 1692 True 736.500000 1134 82.4475 970 2680 2 chr4D.!!$R2 1710
2 TraesCS4D01G338600 chr4D 496347251 496349712 2461 True 326.500000 449 78.3740 994 2236 2 chr4D.!!$R3 1242
3 TraesCS4D01G338600 chr4B 636609357 636611353 1996 True 1487.600000 2891 91.2075 790 3245 2 chr4B.!!$R2 2455
4 TraesCS4D01G338600 chr4B 636065573 636067154 1581 False 517.000000 660 86.2520 970 2680 2 chr4B.!!$F1 1710
5 TraesCS4D01G338600 chr5A 675670391 675674659 4268 True 904.600000 2850 91.9120 1 2685 4 chr5A.!!$R2 2684
6 TraesCS4D01G338600 chr5A 675629982 675631656 1674 True 752.000000 1116 83.1870 970 2680 2 chr5A.!!$R1 1710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 1776 1.951209 TTCTGGGTCTGTCTATGGCA 58.049 50.0 0.0 0.0 0.0 4.92 F
1093 2665 0.811616 ATCGATTGAACTCCGGCTGC 60.812 55.0 0.0 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1657 4538 1.068753 CTCGATGCCGCATCTTCCT 59.931 57.895 26.73 0.00 38.59 3.36 R
3086 6003 0.524862 CAGGTTGGCTACGTACGTCT 59.475 55.000 26.53 11.05 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 113 3.929417 TTTTGTCACGTGACCTTTACG 57.071 42.857 38.12 1.57 44.15 3.18
119 124 4.668837 CGTGACCTTTACGAAACATGTTTG 59.331 41.667 27.85 20.25 43.82 2.93
191 1640 8.604640 AAAATTGACATATGACATGTTGCAAA 57.395 26.923 10.38 0.00 31.52 3.68
246 1699 3.295093 TGGAAAAATTGCCACTGTCTGA 58.705 40.909 0.00 0.00 0.00 3.27
255 1708 2.229543 TGCCACTGTCTGATGCAATTTC 59.770 45.455 0.00 0.00 0.00 2.17
257 1710 3.119245 GCCACTGTCTGATGCAATTTCAT 60.119 43.478 0.00 0.00 0.00 2.57
323 1776 1.951209 TTCTGGGTCTGTCTATGGCA 58.049 50.000 0.00 0.00 0.00 4.92
352 1805 4.689345 GGATGTACCCTATTTATCGCACAC 59.311 45.833 0.00 0.00 0.00 3.82
357 1810 5.562298 ACCCTATTTATCGCACACCTAAT 57.438 39.130 0.00 0.00 0.00 1.73
363 1816 2.038387 ATCGCACACCTAATTGACCC 57.962 50.000 0.00 0.00 0.00 4.46
378 1831 6.371595 AATTGACCCAATCAGGCATAAAAA 57.628 33.333 0.00 0.00 38.99 1.94
379 1832 5.404466 TTGACCCAATCAGGCATAAAAAG 57.596 39.130 0.00 0.00 38.99 2.27
392 1845 9.744468 TCAGGCATAAAAAGAAAAAGAAAGTAC 57.256 29.630 0.00 0.00 0.00 2.73
393 1846 8.978539 CAGGCATAAAAAGAAAAAGAAAGTACC 58.021 33.333 0.00 0.00 0.00 3.34
394 1847 8.924303 AGGCATAAAAAGAAAAAGAAAGTACCT 58.076 29.630 0.00 0.00 0.00 3.08
763 2321 5.841783 AGATTGGGTCCTCTCCTAGATTAAC 59.158 44.000 0.00 0.00 0.00 2.01
788 2346 8.957466 ACTGAAGTTTTAGGTTTATCCTATTGC 58.043 33.333 0.00 0.00 46.81 3.56
833 2391 8.836268 TTATATTGGAACGTGACTAGTTTTGT 57.164 30.769 0.00 0.00 31.14 2.83
840 2398 4.889241 ACGTGACTAGTTTTGTTTGAACG 58.111 39.130 0.00 0.00 32.38 3.95
1090 2662 1.202486 TGGTATCGATTGAACTCCGGC 60.202 52.381 1.71 0.00 0.00 6.13
1091 2663 1.068741 GGTATCGATTGAACTCCGGCT 59.931 52.381 1.71 0.00 0.00 5.52
1093 2665 0.811616 ATCGATTGAACTCCGGCTGC 60.812 55.000 0.00 0.00 0.00 5.25
1094 2666 1.448540 CGATTGAACTCCGGCTGCT 60.449 57.895 0.00 0.00 0.00 4.24
1095 2667 1.021390 CGATTGAACTCCGGCTGCTT 61.021 55.000 0.00 0.00 0.00 3.91
1096 2668 1.168714 GATTGAACTCCGGCTGCTTT 58.831 50.000 0.00 0.00 0.00 3.51
1097 2669 1.131315 GATTGAACTCCGGCTGCTTTC 59.869 52.381 0.00 0.00 0.00 2.62
1132 2718 8.455682 TCGCCTAATTCGTTAATTTGATTTTCT 58.544 29.630 0.00 0.00 36.67 2.52
1512 4349 5.119694 GGTTGGTTCTAGATCTTAGCTTGG 58.880 45.833 0.00 0.00 0.00 3.61
1534 4371 3.866703 TGGTACAATTGGACTGGTTGA 57.133 42.857 20.14 0.00 31.92 3.18
1535 4372 4.380843 TGGTACAATTGGACTGGTTGAT 57.619 40.909 20.14 0.00 31.92 2.57
1536 4373 4.735369 TGGTACAATTGGACTGGTTGATT 58.265 39.130 20.14 0.00 31.92 2.57
1537 4374 4.522405 TGGTACAATTGGACTGGTTGATTG 59.478 41.667 20.14 0.00 31.92 2.67
1566 4441 1.615919 GGACGGATCCATTGGTTTGGT 60.616 52.381 13.41 0.00 45.47 3.67
1583 4458 4.392921 TTGGTTCTCGATCCTGATTCTC 57.607 45.455 0.00 0.00 0.00 2.87
1657 4538 1.185618 ACCACTTCACCGAGCAGCTA 61.186 55.000 0.00 0.00 0.00 3.32
1697 4578 1.004745 TGGAGATTGAGGAAGGCAACC 59.995 52.381 0.00 0.00 37.17 3.77
1891 4772 0.107831 TCCGTACTGCCAAGCTTGTT 59.892 50.000 24.35 8.74 0.00 2.83
2184 5085 3.046390 GACTATTTCGTGGAGCTGATCG 58.954 50.000 0.00 0.00 0.00 3.69
2223 5124 4.731853 TCCGTGGGGATGAGGGCA 62.732 66.667 0.00 0.00 37.43 5.36
2378 5293 1.122019 AGGAGCTGAACCGTGACCTT 61.122 55.000 0.00 0.00 0.00 3.50
2419 5334 1.229051 TGGAGACGGTGGTGATGGA 60.229 57.895 0.00 0.00 0.00 3.41
2543 5460 4.641868 AGGATTACTTCAATGGTAGGGGA 58.358 43.478 0.00 0.00 0.00 4.81
2618 5535 2.612672 CGAGTCTGCTAGATACGTGGAA 59.387 50.000 0.00 0.00 0.00 3.53
2680 5597 6.821388 TGGCAAAATAAACACACAAATAGGT 58.179 32.000 0.00 0.00 0.00 3.08
2681 5598 7.952671 TGGCAAAATAAACACACAAATAGGTA 58.047 30.769 0.00 0.00 0.00 3.08
2682 5599 8.589338 TGGCAAAATAAACACACAAATAGGTAT 58.411 29.630 0.00 0.00 0.00 2.73
2702 5619 7.693132 AGGTATATGTAATCCTACACCTACGA 58.307 38.462 0.00 0.00 40.84 3.43
2704 5621 8.457261 GGTATATGTAATCCTACACCTACGAAG 58.543 40.741 0.00 0.00 40.84 3.79
2705 5622 9.007901 GTATATGTAATCCTACACCTACGAAGT 57.992 37.037 0.00 0.00 42.42 3.01
2706 5623 5.571784 TGTAATCCTACACCTACGAAGTG 57.428 43.478 0.00 0.00 35.37 3.16
2709 5626 6.658816 TGTAATCCTACACCTACGAAGTGTTA 59.341 38.462 13.36 3.43 46.07 2.41
2710 5627 5.573337 ATCCTACACCTACGAAGTGTTAC 57.427 43.478 13.36 0.00 46.07 2.50
2711 5628 3.436704 TCCTACACCTACGAAGTGTTACG 59.563 47.826 13.36 0.00 46.07 3.18
2713 5630 4.391830 CCTACACCTACGAAGTGTTACGTA 59.608 45.833 13.36 0.00 46.07 3.57
2714 5631 4.829064 ACACCTACGAAGTGTTACGTAA 57.171 40.909 3.29 3.29 46.07 3.18
2715 5632 5.376854 ACACCTACGAAGTGTTACGTAAT 57.623 39.130 11.86 0.00 46.07 1.89
2716 5633 5.772521 ACACCTACGAAGTGTTACGTAATT 58.227 37.500 11.86 1.53 46.07 1.40
2717 5634 6.215845 ACACCTACGAAGTGTTACGTAATTT 58.784 36.000 11.86 6.82 46.07 1.82
2718 5635 6.701400 ACACCTACGAAGTGTTACGTAATTTT 59.299 34.615 11.86 6.47 46.07 1.82
2719 5636 7.005380 CACCTACGAAGTGTTACGTAATTTTG 58.995 38.462 11.86 12.13 45.73 2.44
2722 5639 6.586868 ACGAAGTGTTACGTAATTTTGTGA 57.413 33.333 11.86 0.00 42.51 3.58
2723 5640 6.413269 ACGAAGTGTTACGTAATTTTGTGAC 58.587 36.000 11.86 0.00 42.51 3.67
2724 5641 5.553722 CGAAGTGTTACGTAATTTTGTGACG 59.446 40.000 11.86 6.91 42.22 4.35
2733 5650 5.019498 CGTAATTTTGTGACGTAGCATTCC 58.981 41.667 0.00 0.00 0.00 3.01
2734 5651 5.163893 CGTAATTTTGTGACGTAGCATTCCT 60.164 40.000 0.00 0.00 0.00 3.36
2735 5652 4.946784 ATTTTGTGACGTAGCATTCCTC 57.053 40.909 0.00 0.00 0.00 3.71
2736 5653 3.678056 TTTGTGACGTAGCATTCCTCT 57.322 42.857 0.00 0.00 0.00 3.69
2737 5654 3.678056 TTGTGACGTAGCATTCCTCTT 57.322 42.857 0.00 0.00 0.00 2.85
2738 5655 4.794278 TTGTGACGTAGCATTCCTCTTA 57.206 40.909 0.00 0.00 0.00 2.10
2739 5656 4.794278 TGTGACGTAGCATTCCTCTTAA 57.206 40.909 0.00 0.00 0.00 1.85
2740 5657 5.339008 TGTGACGTAGCATTCCTCTTAAT 57.661 39.130 0.00 0.00 0.00 1.40
2741 5658 5.730550 TGTGACGTAGCATTCCTCTTAATT 58.269 37.500 0.00 0.00 0.00 1.40
2742 5659 5.810587 TGTGACGTAGCATTCCTCTTAATTC 59.189 40.000 0.00 0.00 0.00 2.17
2743 5660 6.043411 GTGACGTAGCATTCCTCTTAATTCT 58.957 40.000 0.00 0.00 0.00 2.40
2744 5661 6.199342 GTGACGTAGCATTCCTCTTAATTCTC 59.801 42.308 0.00 0.00 0.00 2.87
2745 5662 6.096987 TGACGTAGCATTCCTCTTAATTCTCT 59.903 38.462 0.00 0.00 0.00 3.10
2746 5663 7.284716 TGACGTAGCATTCCTCTTAATTCTCTA 59.715 37.037 0.00 0.00 0.00 2.43
2747 5664 8.184304 ACGTAGCATTCCTCTTAATTCTCTAT 57.816 34.615 0.00 0.00 0.00 1.98
2748 5665 8.301002 ACGTAGCATTCCTCTTAATTCTCTATC 58.699 37.037 0.00 0.00 0.00 2.08
2749 5666 7.757624 CGTAGCATTCCTCTTAATTCTCTATCC 59.242 40.741 0.00 0.00 0.00 2.59
3103 6020 2.519963 GTAAGACGTACGTAGCCAACC 58.480 52.381 22.87 6.91 0.00 3.77
3104 6021 1.251251 AAGACGTACGTAGCCAACCT 58.749 50.000 22.87 9.37 0.00 3.50
3105 6022 0.524862 AGACGTACGTAGCCAACCTG 59.475 55.000 22.87 0.00 0.00 4.00
3106 6023 1.074872 GACGTACGTAGCCAACCTGC 61.075 60.000 22.87 0.27 0.00 4.85
3107 6024 1.080366 CGTACGTAGCCAACCTGCA 60.080 57.895 7.22 0.00 0.00 4.41
3108 6025 1.076533 CGTACGTAGCCAACCTGCAG 61.077 60.000 6.78 6.78 0.00 4.41
3109 6026 0.739813 GTACGTAGCCAACCTGCAGG 60.740 60.000 31.60 31.60 42.17 4.85
3110 6027 0.901114 TACGTAGCCAACCTGCAGGA 60.901 55.000 39.19 13.13 38.94 3.86
3111 6028 1.448540 CGTAGCCAACCTGCAGGAG 60.449 63.158 39.19 27.72 38.94 3.69
3112 6029 1.679898 GTAGCCAACCTGCAGGAGT 59.320 57.895 39.19 22.79 38.94 3.85
3113 6030 0.902531 GTAGCCAACCTGCAGGAGTA 59.097 55.000 39.19 17.99 38.94 2.59
3114 6031 1.134670 GTAGCCAACCTGCAGGAGTAG 60.135 57.143 39.19 23.16 38.94 2.57
3115 6032 0.838122 AGCCAACCTGCAGGAGTAGT 60.838 55.000 39.19 13.98 38.94 2.73
3116 6033 0.902531 GCCAACCTGCAGGAGTAGTA 59.097 55.000 39.19 0.00 38.94 1.82
3117 6034 1.486726 GCCAACCTGCAGGAGTAGTAT 59.513 52.381 39.19 12.29 38.94 2.12
3118 6035 2.092914 GCCAACCTGCAGGAGTAGTATT 60.093 50.000 39.19 18.00 38.94 1.89
3119 6036 3.535561 CCAACCTGCAGGAGTAGTATTG 58.464 50.000 39.19 27.23 38.94 1.90
3120 6037 2.939103 CAACCTGCAGGAGTAGTATTGC 59.061 50.000 39.19 0.01 38.94 3.56
3121 6038 2.472029 ACCTGCAGGAGTAGTATTGCT 58.528 47.619 39.19 9.18 37.45 3.91
3122 6039 2.432510 ACCTGCAGGAGTAGTATTGCTC 59.567 50.000 39.19 0.00 37.45 4.26
3123 6040 2.544694 CCTGCAGGAGTAGTATTGCTCG 60.545 54.545 29.88 0.00 36.96 5.03
3124 6041 2.099921 CTGCAGGAGTAGTATTGCTCGT 59.900 50.000 5.57 0.00 36.96 4.18
3125 6042 3.284617 TGCAGGAGTAGTATTGCTCGTA 58.715 45.455 0.00 0.00 36.96 3.43
3126 6043 3.889538 TGCAGGAGTAGTATTGCTCGTAT 59.110 43.478 0.00 0.00 36.96 3.06
3127 6044 5.067954 TGCAGGAGTAGTATTGCTCGTATA 58.932 41.667 0.00 0.00 36.96 1.47
3128 6045 5.048921 TGCAGGAGTAGTATTGCTCGTATAC 60.049 44.000 0.00 0.00 36.96 1.47
3129 6046 5.048921 GCAGGAGTAGTATTGCTCGTATACA 60.049 44.000 3.32 0.00 36.96 2.29
3130 6047 6.349445 GCAGGAGTAGTATTGCTCGTATACAT 60.349 42.308 3.32 0.00 36.96 2.29
3131 6048 7.244898 CAGGAGTAGTATTGCTCGTATACATC 58.755 42.308 3.32 0.00 36.96 3.06
3132 6049 6.374894 AGGAGTAGTATTGCTCGTATACATCC 59.625 42.308 3.32 0.00 36.96 3.51
3133 6050 6.404513 GGAGTAGTATTGCTCGTATACATCCC 60.405 46.154 3.32 0.00 36.96 3.85
3134 6051 6.246919 AGTAGTATTGCTCGTATACATCCCT 58.753 40.000 3.32 0.00 32.18 4.20
3135 6052 7.400439 AGTAGTATTGCTCGTATACATCCCTA 58.600 38.462 3.32 0.00 32.18 3.53
3136 6053 7.886970 AGTAGTATTGCTCGTATACATCCCTAA 59.113 37.037 3.32 0.00 32.18 2.69
3137 6054 7.534723 AGTATTGCTCGTATACATCCCTAAA 57.465 36.000 3.32 0.00 32.18 1.85
3138 6055 7.959175 AGTATTGCTCGTATACATCCCTAAAA 58.041 34.615 3.32 0.00 32.18 1.52
3139 6056 8.426489 AGTATTGCTCGTATACATCCCTAAAAA 58.574 33.333 3.32 0.00 32.18 1.94
3165 6082 9.672673 AAATTTGCTAGTATACATGAAGAGTGT 57.327 29.630 5.50 0.00 0.00 3.55
3166 6083 8.654230 ATTTGCTAGTATACATGAAGAGTGTG 57.346 34.615 5.50 0.00 0.00 3.82
3167 6084 6.149129 TGCTAGTATACATGAAGAGTGTGG 57.851 41.667 5.50 0.00 0.00 4.17
3168 6085 4.985409 GCTAGTATACATGAAGAGTGTGGC 59.015 45.833 5.50 0.00 0.00 5.01
3169 6086 5.221342 GCTAGTATACATGAAGAGTGTGGCT 60.221 44.000 5.50 0.00 0.00 4.75
3170 6087 6.016192 GCTAGTATACATGAAGAGTGTGGCTA 60.016 42.308 5.50 0.00 0.00 3.93
3171 6088 6.398234 AGTATACATGAAGAGTGTGGCTAG 57.602 41.667 5.50 0.00 0.00 3.42
3200 6117 5.230942 AGTCGACTGAGATTTAACCAAGTG 58.769 41.667 19.30 0.00 0.00 3.16
3207 6126 6.038271 ACTGAGATTTAACCAAGTGTGTCAAC 59.962 38.462 0.00 0.00 0.00 3.18
3224 6143 4.100529 GTCAACTGACATAACATGCATGC 58.899 43.478 26.53 11.82 44.18 4.06
3225 6144 3.757493 TCAACTGACATAACATGCATGCA 59.243 39.130 26.53 25.04 0.00 3.96
3226 6145 4.217983 TCAACTGACATAACATGCATGCAA 59.782 37.500 26.68 14.96 0.00 4.08
3227 6146 4.365899 ACTGACATAACATGCATGCAAG 57.634 40.909 26.68 23.45 0.00 4.01
3242 6161 6.518493 TGCATGCAAGAGAGAAAAAGAAAAT 58.482 32.000 20.30 0.00 0.00 1.82
3245 6164 8.340443 GCATGCAAGAGAGAAAAAGAAAATTTT 58.660 29.630 14.21 2.28 35.29 1.82
3246 6165 9.646336 CATGCAAGAGAGAAAAAGAAAATTTTG 57.354 29.630 8.47 0.00 32.85 2.44
3247 6166 7.687445 TGCAAGAGAGAAAAAGAAAATTTTGC 58.313 30.769 8.47 1.54 37.23 3.68
3248 6167 7.333921 TGCAAGAGAGAAAAAGAAAATTTTGCA 59.666 29.630 8.47 4.30 42.29 4.08
3249 6168 7.637519 GCAAGAGAGAAAAAGAAAATTTTGCAC 59.362 33.333 8.47 0.00 36.83 4.57
3250 6169 7.455331 AGAGAGAAAAAGAAAATTTTGCACG 57.545 32.000 8.47 0.00 32.85 5.34
3251 6170 6.476706 AGAGAGAAAAAGAAAATTTTGCACGG 59.523 34.615 8.47 0.00 32.85 4.94
3252 6171 6.337356 AGAGAAAAAGAAAATTTTGCACGGA 58.663 32.000 8.47 0.00 32.85 4.69
3253 6172 6.986231 AGAGAAAAAGAAAATTTTGCACGGAT 59.014 30.769 8.47 0.00 32.85 4.18
3254 6173 7.169813 AGAGAAAAAGAAAATTTTGCACGGATC 59.830 33.333 8.47 0.00 32.85 3.36
3255 6174 6.986231 AGAAAAAGAAAATTTTGCACGGATCT 59.014 30.769 8.47 1.00 32.85 2.75
3256 6175 7.495606 AGAAAAAGAAAATTTTGCACGGATCTT 59.504 29.630 8.47 0.00 32.85 2.40
3257 6176 8.655651 AAAAAGAAAATTTTGCACGGATCTTA 57.344 26.923 8.47 0.00 31.55 2.10
3258 6177 8.655651 AAAAGAAAATTTTGCACGGATCTTAA 57.344 26.923 8.47 0.00 0.00 1.85
3259 6178 8.655651 AAAGAAAATTTTGCACGGATCTTAAA 57.344 26.923 8.47 0.00 0.00 1.52
3260 6179 7.873739 AGAAAATTTTGCACGGATCTTAAAG 57.126 32.000 8.47 0.00 0.00 1.85
3261 6180 7.433680 AGAAAATTTTGCACGGATCTTAAAGT 58.566 30.769 8.47 0.00 0.00 2.66
3262 6181 8.573035 AGAAAATTTTGCACGGATCTTAAAGTA 58.427 29.630 8.47 0.00 0.00 2.24
3263 6182 9.187455 GAAAATTTTGCACGGATCTTAAAGTAA 57.813 29.630 8.47 0.00 0.00 2.24
3264 6183 9.705290 AAAATTTTGCACGGATCTTAAAGTAAT 57.295 25.926 1.75 0.00 0.00 1.89
3268 6187 8.958119 TTTGCACGGATCTTAAAGTAATATCT 57.042 30.769 0.00 0.00 0.00 1.98
3269 6188 8.589335 TTGCACGGATCTTAAAGTAATATCTC 57.411 34.615 0.00 0.00 0.00 2.75
3270 6189 7.722363 TGCACGGATCTTAAAGTAATATCTCA 58.278 34.615 0.00 0.00 0.00 3.27
3271 6190 7.652105 TGCACGGATCTTAAAGTAATATCTCAC 59.348 37.037 0.00 0.00 0.00 3.51
3272 6191 7.148950 GCACGGATCTTAAAGTAATATCTCACG 60.149 40.741 0.00 0.00 0.00 4.35
3273 6192 7.326305 CACGGATCTTAAAGTAATATCTCACGG 59.674 40.741 0.00 0.00 0.00 4.94
3274 6193 7.230108 ACGGATCTTAAAGTAATATCTCACGGA 59.770 37.037 0.00 0.00 0.00 4.69
3275 6194 8.244802 CGGATCTTAAAGTAATATCTCACGGAT 58.755 37.037 0.00 0.00 38.38 4.18
3276 6195 9.360093 GGATCTTAAAGTAATATCTCACGGATG 57.640 37.037 0.00 0.00 35.98 3.51
3277 6196 9.915629 GATCTTAAAGTAATATCTCACGGATGT 57.084 33.333 0.00 0.00 35.98 3.06
3280 6199 9.130312 CTTAAAGTAATATCTCACGGATGTAGC 57.870 37.037 0.00 0.00 35.98 3.58
3281 6200 6.650427 AAGTAATATCTCACGGATGTAGCA 57.350 37.500 0.00 0.00 35.98 3.49
3282 6201 6.842437 AGTAATATCTCACGGATGTAGCAT 57.158 37.500 0.00 0.00 35.98 3.79
3283 6202 6.857956 AGTAATATCTCACGGATGTAGCATC 58.142 40.000 0.80 0.80 35.98 3.91
3284 6203 2.713895 ATCTCACGGATGTAGCATCG 57.286 50.000 3.44 2.41 32.69 3.84
3285 6204 1.675552 TCTCACGGATGTAGCATCGA 58.324 50.000 0.00 0.00 0.00 3.59
3286 6205 2.230660 TCTCACGGATGTAGCATCGAT 58.769 47.619 0.00 0.00 0.00 3.59
3287 6206 2.623416 TCTCACGGATGTAGCATCGATT 59.377 45.455 0.00 0.00 0.00 3.34
3288 6207 3.818773 TCTCACGGATGTAGCATCGATTA 59.181 43.478 0.00 0.00 0.00 1.75
3289 6208 4.459337 TCTCACGGATGTAGCATCGATTAT 59.541 41.667 0.00 0.00 0.00 1.28
3290 6209 5.048013 TCTCACGGATGTAGCATCGATTATT 60.048 40.000 0.00 0.00 0.00 1.40
3291 6210 6.150474 TCTCACGGATGTAGCATCGATTATTA 59.850 38.462 0.00 0.00 0.00 0.98
3292 6211 6.683715 TCACGGATGTAGCATCGATTATTAA 58.316 36.000 0.00 0.00 0.00 1.40
3293 6212 7.149307 TCACGGATGTAGCATCGATTATTAAA 58.851 34.615 0.00 0.00 0.00 1.52
3294 6213 7.654116 TCACGGATGTAGCATCGATTATTAAAA 59.346 33.333 0.00 0.00 0.00 1.52
3295 6214 7.952101 CACGGATGTAGCATCGATTATTAAAAG 59.048 37.037 0.00 0.00 0.00 2.27
3296 6215 6.955963 CGGATGTAGCATCGATTATTAAAAGC 59.044 38.462 0.00 0.00 0.00 3.51
3297 6216 7.244192 GGATGTAGCATCGATTATTAAAAGCC 58.756 38.462 0.00 0.00 0.00 4.35
3298 6217 7.119846 GGATGTAGCATCGATTATTAAAAGCCT 59.880 37.037 0.00 0.00 0.00 4.58
3299 6218 7.189693 TGTAGCATCGATTATTAAAAGCCTG 57.810 36.000 0.00 0.00 0.00 4.85
3300 6219 6.765989 TGTAGCATCGATTATTAAAAGCCTGT 59.234 34.615 0.00 0.00 0.00 4.00
3301 6220 6.699575 AGCATCGATTATTAAAAGCCTGTT 57.300 33.333 0.00 0.00 0.00 3.16
3302 6221 7.100458 AGCATCGATTATTAAAAGCCTGTTT 57.900 32.000 0.00 0.00 0.00 2.83
3303 6222 6.974622 AGCATCGATTATTAAAAGCCTGTTTG 59.025 34.615 0.00 0.00 0.00 2.93
3304 6223 6.198966 GCATCGATTATTAAAAGCCTGTTTGG 59.801 38.462 0.00 0.00 39.35 3.28
3313 6232 4.488790 CCTGTTTGGCACTGCTCT 57.511 55.556 0.00 0.00 0.00 4.09
3314 6233 1.954528 CCTGTTTGGCACTGCTCTG 59.045 57.895 0.00 0.00 0.00 3.35
3315 6234 1.285023 CTGTTTGGCACTGCTCTGC 59.715 57.895 0.00 0.00 36.33 4.26
3316 6235 1.152902 TGTTTGGCACTGCTCTGCT 60.153 52.632 0.00 0.00 37.33 4.24
3317 6236 1.168407 TGTTTGGCACTGCTCTGCTC 61.168 55.000 0.00 0.00 37.33 4.26
3318 6237 1.601759 TTTGGCACTGCTCTGCTCC 60.602 57.895 0.00 0.00 37.33 4.70
3319 6238 2.060567 TTTGGCACTGCTCTGCTCCT 62.061 55.000 0.00 0.00 37.33 3.69
3320 6239 2.060567 TTGGCACTGCTCTGCTCCTT 62.061 55.000 0.00 0.00 37.33 3.36
3321 6240 1.194121 TGGCACTGCTCTGCTCCTTA 61.194 55.000 0.00 0.00 37.33 2.69
3322 6241 0.036010 GGCACTGCTCTGCTCCTTAA 60.036 55.000 0.00 0.00 37.33 1.85
3323 6242 1.611673 GGCACTGCTCTGCTCCTTAAA 60.612 52.381 0.00 0.00 37.33 1.52
3324 6243 2.154462 GCACTGCTCTGCTCCTTAAAA 58.846 47.619 0.00 0.00 34.06 1.52
3325 6244 2.751806 GCACTGCTCTGCTCCTTAAAAT 59.248 45.455 0.00 0.00 34.06 1.82
3326 6245 3.427233 GCACTGCTCTGCTCCTTAAAATG 60.427 47.826 0.00 0.00 34.06 2.32
3327 6246 4.005650 CACTGCTCTGCTCCTTAAAATGA 58.994 43.478 0.00 0.00 0.00 2.57
3328 6247 4.456911 CACTGCTCTGCTCCTTAAAATGAA 59.543 41.667 0.00 0.00 0.00 2.57
3329 6248 4.699257 ACTGCTCTGCTCCTTAAAATGAAG 59.301 41.667 0.00 0.00 0.00 3.02
3330 6249 4.910195 TGCTCTGCTCCTTAAAATGAAGA 58.090 39.130 0.00 0.00 0.00 2.87
3331 6250 5.316167 TGCTCTGCTCCTTAAAATGAAGAA 58.684 37.500 0.00 0.00 0.00 2.52
3332 6251 5.769662 TGCTCTGCTCCTTAAAATGAAGAAA 59.230 36.000 0.00 0.00 0.00 2.52
3333 6252 6.072286 TGCTCTGCTCCTTAAAATGAAGAAAG 60.072 38.462 0.00 0.00 0.00 2.62
3334 6253 6.259550 TCTGCTCCTTAAAATGAAGAAAGC 57.740 37.500 0.00 0.00 36.42 3.51
3335 6254 5.769662 TCTGCTCCTTAAAATGAAGAAAGCA 59.230 36.000 10.64 10.64 40.07 3.91
3336 6255 6.017400 TGCTCCTTAAAATGAAGAAAGCAG 57.983 37.500 8.29 0.00 38.75 4.24
3337 6256 5.536161 TGCTCCTTAAAATGAAGAAAGCAGT 59.464 36.000 8.29 0.00 38.75 4.40
3338 6257 6.714810 TGCTCCTTAAAATGAAGAAAGCAGTA 59.285 34.615 8.29 0.00 38.75 2.74
3339 6258 7.094634 TGCTCCTTAAAATGAAGAAAGCAGTAG 60.095 37.037 8.29 0.00 38.75 2.57
3340 6259 7.145932 TCCTTAAAATGAAGAAAGCAGTAGC 57.854 36.000 0.00 0.00 42.56 3.58
3341 6260 6.714810 TCCTTAAAATGAAGAAAGCAGTAGCA 59.285 34.615 0.00 0.00 45.49 3.49
3342 6261 7.230510 TCCTTAAAATGAAGAAAGCAGTAGCAA 59.769 33.333 0.00 0.00 45.49 3.91
3343 6262 8.031277 CCTTAAAATGAAGAAAGCAGTAGCAAT 58.969 33.333 0.00 0.00 45.49 3.56
3344 6263 8.746922 TTAAAATGAAGAAAGCAGTAGCAATG 57.253 30.769 0.00 0.00 45.49 2.82
3345 6264 6.579666 AAATGAAGAAAGCAGTAGCAATGA 57.420 33.333 0.00 0.00 45.49 2.57
3346 6265 6.579666 AATGAAGAAAGCAGTAGCAATGAA 57.420 33.333 0.00 0.00 45.49 2.57
3347 6266 6.579666 ATGAAGAAAGCAGTAGCAATGAAA 57.420 33.333 0.00 0.00 45.49 2.69
3348 6267 5.762045 TGAAGAAAGCAGTAGCAATGAAAC 58.238 37.500 0.00 0.00 45.49 2.78
3349 6268 5.532406 TGAAGAAAGCAGTAGCAATGAAACT 59.468 36.000 0.00 0.00 45.49 2.66
3350 6269 5.368256 AGAAAGCAGTAGCAATGAAACTG 57.632 39.130 9.99 9.99 45.49 3.16
3351 6270 3.565905 AAGCAGTAGCAATGAAACTGC 57.434 42.857 23.85 23.85 45.49 4.40
3352 6271 2.507484 AGCAGTAGCAATGAAACTGCA 58.493 42.857 29.05 0.00 45.49 4.41
3353 6272 2.886523 AGCAGTAGCAATGAAACTGCAA 59.113 40.909 29.05 0.00 45.49 4.08
3354 6273 2.982470 GCAGTAGCAATGAAACTGCAAC 59.018 45.455 25.33 5.92 41.58 4.17
3355 6274 3.228749 CAGTAGCAATGAAACTGCAACG 58.771 45.455 3.14 0.00 0.00 4.10
3356 6275 3.058983 CAGTAGCAATGAAACTGCAACGA 60.059 43.478 0.00 0.00 0.00 3.85
3357 6276 3.753272 AGTAGCAATGAAACTGCAACGAT 59.247 39.130 0.00 0.00 0.00 3.73
3358 6277 3.207474 AGCAATGAAACTGCAACGATC 57.793 42.857 0.00 0.00 0.00 3.69
3359 6278 2.553602 AGCAATGAAACTGCAACGATCA 59.446 40.909 0.00 0.00 0.00 2.92
3360 6279 3.192001 AGCAATGAAACTGCAACGATCAT 59.808 39.130 0.00 0.00 32.36 2.45
3361 6280 4.395854 AGCAATGAAACTGCAACGATCATA 59.604 37.500 0.00 0.00 30.90 2.15
3362 6281 5.094812 GCAATGAAACTGCAACGATCATAA 58.905 37.500 0.00 0.00 30.90 1.90
3363 6282 5.745294 GCAATGAAACTGCAACGATCATAAT 59.255 36.000 0.00 0.00 30.90 1.28
3364 6283 6.291427 GCAATGAAACTGCAACGATCATAATG 60.291 38.462 0.00 3.08 30.90 1.90
3365 6284 4.661125 TGAAACTGCAACGATCATAATGC 58.339 39.130 0.00 0.00 39.22 3.56
3366 6285 4.395854 TGAAACTGCAACGATCATAATGCT 59.604 37.500 9.49 0.00 39.49 3.79
3367 6286 5.584251 TGAAACTGCAACGATCATAATGCTA 59.416 36.000 9.49 0.00 39.49 3.49
3368 6287 6.093357 TGAAACTGCAACGATCATAATGCTAA 59.907 34.615 9.49 0.00 39.49 3.09
3369 6288 6.435430 AACTGCAACGATCATAATGCTAAA 57.565 33.333 9.49 0.00 39.49 1.85
3370 6289 5.810525 ACTGCAACGATCATAATGCTAAAC 58.189 37.500 9.49 0.00 39.49 2.01
3371 6290 5.586243 ACTGCAACGATCATAATGCTAAACT 59.414 36.000 9.49 0.00 39.49 2.66
3372 6291 6.761242 ACTGCAACGATCATAATGCTAAACTA 59.239 34.615 9.49 0.00 39.49 2.24
3373 6292 7.279981 ACTGCAACGATCATAATGCTAAACTAA 59.720 33.333 9.49 0.00 39.49 2.24
3374 6293 7.406553 TGCAACGATCATAATGCTAAACTAAC 58.593 34.615 9.49 0.00 39.49 2.34
3375 6294 7.065204 TGCAACGATCATAATGCTAAACTAACA 59.935 33.333 9.49 0.00 39.49 2.41
3376 6295 7.908082 GCAACGATCATAATGCTAAACTAACAA 59.092 33.333 0.00 0.00 35.93 2.83
3377 6296 9.767684 CAACGATCATAATGCTAAACTAACAAA 57.232 29.630 0.00 0.00 0.00 2.83
3379 6298 9.935682 ACGATCATAATGCTAAACTAACAAATG 57.064 29.630 0.00 0.00 0.00 2.32
3380 6299 9.385902 CGATCATAATGCTAAACTAACAAATGG 57.614 33.333 0.00 0.00 0.00 3.16
3381 6300 9.683069 GATCATAATGCTAAACTAACAAATGGG 57.317 33.333 0.00 0.00 0.00 4.00
3382 6301 8.588290 TCATAATGCTAAACTAACAAATGGGT 57.412 30.769 0.00 0.00 0.00 4.51
3383 6302 8.682710 TCATAATGCTAAACTAACAAATGGGTC 58.317 33.333 0.00 0.00 0.00 4.46
3384 6303 8.686334 CATAATGCTAAACTAACAAATGGGTCT 58.314 33.333 0.00 0.00 0.00 3.85
3385 6304 7.539034 AATGCTAAACTAACAAATGGGTCTT 57.461 32.000 0.00 0.00 0.00 3.01
3386 6305 6.325919 TGCTAAACTAACAAATGGGTCTTG 57.674 37.500 0.00 0.00 0.00 3.02
3387 6306 5.830991 TGCTAAACTAACAAATGGGTCTTGT 59.169 36.000 0.00 0.00 38.65 3.16
3388 6307 6.016610 TGCTAAACTAACAAATGGGTCTTGTC 60.017 38.462 0.00 0.00 35.98 3.18
3389 6308 5.784578 AAACTAACAAATGGGTCTTGTCC 57.215 39.130 0.00 0.00 35.98 4.02
3390 6309 4.447138 ACTAACAAATGGGTCTTGTCCA 57.553 40.909 0.00 0.00 35.98 4.02
3391 6310 4.998051 ACTAACAAATGGGTCTTGTCCAT 58.002 39.130 0.00 0.00 46.11 3.41
3392 6311 5.010282 ACTAACAAATGGGTCTTGTCCATC 58.990 41.667 0.00 0.00 43.61 3.51
3393 6312 3.524095 ACAAATGGGTCTTGTCCATCA 57.476 42.857 0.00 0.00 43.61 3.07
3394 6313 3.157087 ACAAATGGGTCTTGTCCATCAC 58.843 45.455 0.00 0.00 43.61 3.06
3395 6314 3.156293 CAAATGGGTCTTGTCCATCACA 58.844 45.455 0.00 0.00 43.61 3.58
3396 6315 3.744940 AATGGGTCTTGTCCATCACAT 57.255 42.857 0.00 0.00 43.61 3.21
3397 6316 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
3398 6317 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
3399 6318 2.290260 TGGGTCTTGTCCATCACATCAC 60.290 50.000 0.00 0.00 33.90 3.06
3400 6319 2.026822 GGGTCTTGTCCATCACATCACT 60.027 50.000 0.00 0.00 33.90 3.41
3401 6320 3.265791 GGTCTTGTCCATCACATCACTC 58.734 50.000 0.00 0.00 33.90 3.51
3402 6321 3.055530 GGTCTTGTCCATCACATCACTCT 60.056 47.826 0.00 0.00 33.90 3.24
3403 6322 4.564406 GGTCTTGTCCATCACATCACTCTT 60.564 45.833 0.00 0.00 33.90 2.85
3404 6323 4.629200 GTCTTGTCCATCACATCACTCTTC 59.371 45.833 0.00 0.00 33.90 2.87
3405 6324 4.529769 TCTTGTCCATCACATCACTCTTCT 59.470 41.667 0.00 0.00 33.90 2.85
3406 6325 5.716703 TCTTGTCCATCACATCACTCTTCTA 59.283 40.000 0.00 0.00 33.90 2.10
3407 6326 6.211384 TCTTGTCCATCACATCACTCTTCTAA 59.789 38.462 0.00 0.00 33.90 2.10
3408 6327 6.550938 TGTCCATCACATCACTCTTCTAAT 57.449 37.500 0.00 0.00 0.00 1.73
3409 6328 6.343703 TGTCCATCACATCACTCTTCTAATG 58.656 40.000 0.00 0.00 0.00 1.90
3410 6329 6.155049 TGTCCATCACATCACTCTTCTAATGA 59.845 38.462 0.00 0.00 0.00 2.57
3411 6330 7.147602 TGTCCATCACATCACTCTTCTAATGAT 60.148 37.037 0.00 0.00 33.28 2.45
3419 6338 8.523523 CATCACTCTTCTAATGATGTGATCTC 57.476 38.462 0.00 0.00 43.08 2.75
3420 6339 7.651027 TCACTCTTCTAATGATGTGATCTCA 57.349 36.000 0.00 0.00 30.78 3.27
3421 6340 8.247666 TCACTCTTCTAATGATGTGATCTCAT 57.752 34.615 9.96 9.96 34.86 2.90
3422 6341 8.702819 TCACTCTTCTAATGATGTGATCTCATT 58.297 33.333 11.38 11.70 43.75 2.57
3423 6342 8.980610 CACTCTTCTAATGATGTGATCTCATTC 58.019 37.037 11.38 6.12 41.28 2.67
3424 6343 8.702819 ACTCTTCTAATGATGTGATCTCATTCA 58.297 33.333 11.38 10.74 41.28 2.57
3425 6344 9.713713 CTCTTCTAATGATGTGATCTCATTCAT 57.286 33.333 11.38 12.22 41.28 2.57
3426 6345 9.708092 TCTTCTAATGATGTGATCTCATTCATC 57.292 33.333 11.38 9.19 41.28 2.92
3427 6346 9.490379 CTTCTAATGATGTGATCTCATTCATCA 57.510 33.333 11.38 12.94 46.43 3.07
3428 6347 9.841295 TTCTAATGATGTGATCTCATTCATCAA 57.159 29.630 11.38 7.76 45.83 2.57
3429 6348 9.841295 TCTAATGATGTGATCTCATTCATCAAA 57.159 29.630 11.38 7.66 45.83 2.69
3433 6352 7.927048 TGATGTGATCTCATTCATCAAATGAC 58.073 34.615 11.38 0.00 46.96 3.06
3434 6353 7.554835 TGATGTGATCTCATTCATCAAATGACA 59.445 33.333 11.38 0.00 46.96 3.58
3435 6354 7.690952 TGTGATCTCATTCATCAAATGACAA 57.309 32.000 0.00 0.00 46.96 3.18
3436 6355 7.532571 TGTGATCTCATTCATCAAATGACAAC 58.467 34.615 0.00 0.00 46.96 3.32
3437 6356 7.175293 TGTGATCTCATTCATCAAATGACAACA 59.825 33.333 0.00 0.00 46.96 3.33
3438 6357 7.484007 GTGATCTCATTCATCAAATGACAACAC 59.516 37.037 0.00 0.01 46.96 3.32
3439 6358 6.880942 TCTCATTCATCAAATGACAACACA 57.119 33.333 0.00 0.00 46.96 3.72
3440 6359 7.457024 TCTCATTCATCAAATGACAACACAT 57.543 32.000 0.00 0.00 46.96 3.21
3441 6360 7.309920 TCTCATTCATCAAATGACAACACATG 58.690 34.615 0.00 0.00 46.96 3.21
3442 6361 6.983984 TCATTCATCAAATGACAACACATGT 58.016 32.000 0.00 0.00 46.96 3.21
3454 6373 5.755409 ACAACACATGTCTATGGTTAGGA 57.245 39.130 0.00 0.00 37.96 2.94
3455 6374 6.121776 ACAACACATGTCTATGGTTAGGAA 57.878 37.500 0.00 0.00 37.96 3.36
3456 6375 6.539173 ACAACACATGTCTATGGTTAGGAAA 58.461 36.000 0.00 0.00 37.96 3.13
3457 6376 6.430000 ACAACACATGTCTATGGTTAGGAAAC 59.570 38.462 0.00 0.00 37.96 2.78
3458 6377 5.175859 ACACATGTCTATGGTTAGGAAACG 58.824 41.667 0.00 0.00 38.66 3.60
3459 6378 5.175859 CACATGTCTATGGTTAGGAAACGT 58.824 41.667 0.00 0.00 38.66 3.99
3460 6379 6.071221 ACACATGTCTATGGTTAGGAAACGTA 60.071 38.462 0.00 0.00 38.66 3.57
3461 6380 6.814644 CACATGTCTATGGTTAGGAAACGTAA 59.185 38.462 0.00 0.00 38.66 3.18
3462 6381 6.815142 ACATGTCTATGGTTAGGAAACGTAAC 59.185 38.462 0.00 0.00 38.66 2.50
3463 6382 5.723295 TGTCTATGGTTAGGAAACGTAACC 58.277 41.667 19.71 19.71 46.71 2.85
3470 6389 5.934921 GGTTAGGAAACGTAACCATCTTTG 58.065 41.667 20.87 0.00 46.08 2.77
3471 6390 5.702209 GGTTAGGAAACGTAACCATCTTTGA 59.298 40.000 20.87 0.00 46.08 2.69
3472 6391 6.373495 GGTTAGGAAACGTAACCATCTTTGAT 59.627 38.462 20.87 0.00 46.08 2.57
3473 6392 7.550196 GGTTAGGAAACGTAACCATCTTTGATA 59.450 37.037 20.87 0.00 46.08 2.15
3474 6393 8.938906 GTTAGGAAACGTAACCATCTTTGATAA 58.061 33.333 12.35 0.00 0.00 1.75
3475 6394 7.989416 AGGAAACGTAACCATCTTTGATAAA 57.011 32.000 12.35 0.00 0.00 1.40
3476 6395 7.813645 AGGAAACGTAACCATCTTTGATAAAC 58.186 34.615 12.35 0.00 0.00 2.01
3477 6396 6.739550 GGAAACGTAACCATCTTTGATAAACG 59.260 38.462 6.14 0.00 0.00 3.60
3478 6397 7.360269 GGAAACGTAACCATCTTTGATAAACGA 60.360 37.037 6.14 0.00 0.00 3.85
3479 6398 6.642683 ACGTAACCATCTTTGATAAACGAG 57.357 37.500 0.00 0.00 0.00 4.18
3480 6399 5.063060 ACGTAACCATCTTTGATAAACGAGC 59.937 40.000 0.00 0.00 0.00 5.03
3481 6400 5.291128 CGTAACCATCTTTGATAAACGAGCT 59.709 40.000 0.00 0.00 0.00 4.09
3482 6401 6.474427 CGTAACCATCTTTGATAAACGAGCTA 59.526 38.462 0.00 0.00 0.00 3.32
3483 6402 6.910536 AACCATCTTTGATAAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
3484 6403 5.978814 ACCATCTTTGATAAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
3485 6404 6.043411 ACCATCTTTGATAAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
3486 6405 6.042777 CCATCTTTGATAAACGAGCTAGTCA 58.957 40.000 0.00 0.00 0.00 3.41
3487 6406 6.535150 CCATCTTTGATAAACGAGCTAGTCAA 59.465 38.462 0.00 0.00 0.00 3.18
3488 6407 7.254252 CCATCTTTGATAAACGAGCTAGTCAAG 60.254 40.741 0.00 0.00 0.00 3.02
3489 6408 6.688578 TCTTTGATAAACGAGCTAGTCAAGT 58.311 36.000 0.00 0.00 0.00 3.16
3490 6409 7.823665 TCTTTGATAAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 0.00 2.24
3491 6410 7.968956 TCTTTGATAAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 0.00 2.57
3492 6411 6.997239 TGATAAACGAGCTAGTCAAGTAGA 57.003 37.500 0.00 0.00 0.00 2.59
3493 6412 7.017498 TGATAAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
3494 6413 4.705337 AAACGAGCTAGTCAAGTAGAGG 57.295 45.455 0.00 0.00 0.00 3.69
3495 6414 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
3496 6415 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
3497 6416 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
3498 6417 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
3499 6418 4.457603 CGAGCTAGTCAAGTAGAGGCATAT 59.542 45.833 0.00 0.00 0.00 1.78
3500 6419 5.048364 CGAGCTAGTCAAGTAGAGGCATATT 60.048 44.000 0.00 0.00 0.00 1.28
3501 6420 6.149640 CGAGCTAGTCAAGTAGAGGCATATTA 59.850 42.308 0.00 0.00 0.00 0.98
3502 6421 7.461182 AGCTAGTCAAGTAGAGGCATATTAG 57.539 40.000 0.00 0.00 0.00 1.73
3503 6422 6.435904 AGCTAGTCAAGTAGAGGCATATTAGG 59.564 42.308 0.00 0.00 0.00 2.69
3504 6423 6.350612 GCTAGTCAAGTAGAGGCATATTAGGG 60.351 46.154 0.00 0.00 0.00 3.53
3505 6424 5.716979 AGTCAAGTAGAGGCATATTAGGGA 58.283 41.667 0.00 0.00 0.00 4.20
3506 6425 5.540719 AGTCAAGTAGAGGCATATTAGGGAC 59.459 44.000 0.00 0.00 0.00 4.46
3507 6426 5.304614 GTCAAGTAGAGGCATATTAGGGACA 59.695 44.000 0.00 0.00 0.00 4.02
3508 6427 5.304614 TCAAGTAGAGGCATATTAGGGACAC 59.695 44.000 0.00 0.00 0.00 3.67
3509 6428 5.081315 AGTAGAGGCATATTAGGGACACT 57.919 43.478 0.00 0.00 0.00 3.55
3510 6429 5.468658 AGTAGAGGCATATTAGGGACACTT 58.531 41.667 0.00 0.00 0.00 3.16
3511 6430 5.905913 AGTAGAGGCATATTAGGGACACTTT 59.094 40.000 0.00 0.00 0.00 2.66
3512 6431 5.041191 AGAGGCATATTAGGGACACTTTG 57.959 43.478 0.00 0.00 0.00 2.77
3513 6432 4.475016 AGAGGCATATTAGGGACACTTTGT 59.525 41.667 0.00 0.00 0.00 2.83
3514 6433 5.044846 AGAGGCATATTAGGGACACTTTGTT 60.045 40.000 0.00 0.00 0.00 2.83
3515 6434 5.580022 AGGCATATTAGGGACACTTTGTTT 58.420 37.500 0.00 0.00 0.00 2.83
3516 6435 6.016555 AGGCATATTAGGGACACTTTGTTTT 58.983 36.000 0.00 0.00 0.00 2.43
3517 6436 6.071391 AGGCATATTAGGGACACTTTGTTTTG 60.071 38.462 0.00 0.00 0.00 2.44
3518 6437 6.295067 GGCATATTAGGGACACTTTGTTTTGT 60.295 38.462 0.00 0.00 0.00 2.83
3519 6438 6.586082 GCATATTAGGGACACTTTGTTTTGTG 59.414 38.462 0.00 0.00 39.80 3.33
3521 6440 8.788806 CATATTAGGGACACTTTGTTTTGTGTA 58.211 33.333 0.00 0.00 45.94 2.90
3522 6441 7.833285 ATTAGGGACACTTTGTTTTGTGTAT 57.167 32.000 0.00 0.00 45.94 2.29
3523 6442 5.514274 AGGGACACTTTGTTTTGTGTATG 57.486 39.130 0.00 0.00 45.94 2.39
3524 6443 4.953579 AGGGACACTTTGTTTTGTGTATGT 59.046 37.500 0.00 0.00 45.94 2.29
3525 6444 6.123651 AGGGACACTTTGTTTTGTGTATGTA 58.876 36.000 0.00 0.00 45.94 2.29
3526 6445 6.775629 AGGGACACTTTGTTTTGTGTATGTAT 59.224 34.615 0.00 0.00 45.94 2.29
3527 6446 7.286775 AGGGACACTTTGTTTTGTGTATGTATT 59.713 33.333 0.00 0.00 45.94 1.89
3528 6447 7.593644 GGGACACTTTGTTTTGTGTATGTATTC 59.406 37.037 0.00 0.00 45.94 1.75
3529 6448 8.132362 GGACACTTTGTTTTGTGTATGTATTCA 58.868 33.333 0.00 0.00 45.94 2.57
3530 6449 8.850454 ACACTTTGTTTTGTGTATGTATTCAC 57.150 30.769 0.00 0.00 44.40 3.18
3531 6450 8.462811 ACACTTTGTTTTGTGTATGTATTCACA 58.537 29.630 0.00 0.90 44.40 3.58
3532 6451 8.742188 CACTTTGTTTTGTGTATGTATTCACAC 58.258 33.333 4.15 0.00 42.93 3.82
3543 6462 9.582431 GTGTATGTATTCACACATGTACTAAGT 57.418 33.333 0.00 0.00 43.61 2.24
3548 6467 9.549078 TGTATTCACACATGTACTAAGTTTTCA 57.451 29.630 0.00 0.00 0.00 2.69
3630 6549 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
3642 6561 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
3643 6562 4.646572 CCTCTAGGGCATATTTCCTTCAC 58.353 47.826 0.00 0.00 34.75 3.18
3644 6563 4.349342 CCTCTAGGGCATATTTCCTTCACT 59.651 45.833 0.00 0.00 34.75 3.41
3645 6564 5.163152 CCTCTAGGGCATATTTCCTTCACTT 60.163 44.000 0.00 0.00 34.75 3.16
3646 6565 6.043243 CCTCTAGGGCATATTTCCTTCACTTA 59.957 42.308 0.00 0.00 34.75 2.24
3647 6566 7.256835 CCTCTAGGGCATATTTCCTTCACTTAT 60.257 40.741 0.00 0.00 34.75 1.73
3648 6567 7.453393 TCTAGGGCATATTTCCTTCACTTATG 58.547 38.462 0.00 0.00 34.75 1.90
3649 6568 6.266131 AGGGCATATTTCCTTCACTTATGA 57.734 37.500 0.00 0.00 0.00 2.15
3650 6569 6.064717 AGGGCATATTTCCTTCACTTATGAC 58.935 40.000 0.00 0.00 33.38 3.06
3651 6570 5.241728 GGGCATATTTCCTTCACTTATGACC 59.758 44.000 0.00 0.00 40.31 4.02
3652 6571 6.064717 GGCATATTTCCTTCACTTATGACCT 58.935 40.000 0.00 0.00 33.38 3.85
3653 6572 6.547510 GGCATATTTCCTTCACTTATGACCTT 59.452 38.462 0.00 0.00 33.38 3.50
3654 6573 7.719633 GGCATATTTCCTTCACTTATGACCTTA 59.280 37.037 0.00 0.00 33.38 2.69
3655 6574 9.289782 GCATATTTCCTTCACTTATGACCTTAT 57.710 33.333 0.00 0.00 33.38 1.73
3662 6581 9.613428 TCCTTCACTTATGACCTTATATTTGTG 57.387 33.333 0.00 0.00 33.38 3.33
3663 6582 9.613428 CCTTCACTTATGACCTTATATTTGTGA 57.387 33.333 0.00 0.00 33.38 3.58
3666 6585 9.476202 TCACTTATGACCTTATATTTGTGATCG 57.524 33.333 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 95 2.867287 TCGTAAAGGTCACGTGACAA 57.133 45.000 40.51 24.27 46.47 3.18
91 96 2.859538 GTTTCGTAAAGGTCACGTGACA 59.140 45.455 40.51 23.59 46.47 3.58
98 103 5.587043 AGACAAACATGTTTCGTAAAGGTCA 59.413 36.000 25.25 0.00 0.00 4.02
105 110 6.687081 AGGAAAAGACAAACATGTTTCGTA 57.313 33.333 20.85 0.00 0.00 3.43
106 111 5.576447 AGGAAAAGACAAACATGTTTCGT 57.424 34.783 20.85 20.08 0.00 3.85
119 124 7.546778 TGGCAAAAACATTTTAGGAAAAGAC 57.453 32.000 0.00 0.00 33.22 3.01
170 178 9.872721 ATAAATTTGCAACATGTCATATGTCAA 57.127 25.926 6.74 0.38 0.00 3.18
228 1680 3.069872 TGCATCAGACAGTGGCAATTTTT 59.930 39.130 0.00 0.00 0.00 1.94
232 1684 1.913778 TTGCATCAGACAGTGGCAAT 58.086 45.000 0.00 0.00 39.33 3.56
329 1782 4.689345 GTGTGCGATAAATAGGGTACATCC 59.311 45.833 0.00 0.00 0.00 3.51
337 1790 6.073222 GGTCAATTAGGTGTGCGATAAATAGG 60.073 42.308 0.00 0.00 0.00 2.57
357 1810 5.083122 TCTTTTTATGCCTGATTGGGTCAA 58.917 37.500 0.00 0.00 36.14 3.18
815 2373 5.473796 TCAAACAAAACTAGTCACGTTCC 57.526 39.130 0.00 0.00 0.00 3.62
833 2391 4.316645 TGTAATCAATCCGTCCGTTCAAA 58.683 39.130 0.00 0.00 0.00 2.69
840 2398 4.273480 CACCAATCTGTAATCAATCCGTCC 59.727 45.833 0.00 0.00 0.00 4.79
1016 2578 1.310904 GAGAACGCCGAGGTAGATCT 58.689 55.000 0.00 0.00 0.00 2.75
1090 2662 1.784062 CGAGAACGCAGGAAAGCAG 59.216 57.895 0.00 0.00 0.00 4.24
1091 2663 3.951332 CGAGAACGCAGGAAAGCA 58.049 55.556 0.00 0.00 0.00 3.91
1441 4278 3.267974 CCAAGGAGGCGCTTGAAC 58.732 61.111 7.64 0.00 32.75 3.18
1512 4349 4.331968 TCAACCAGTCCAATTGTACCATC 58.668 43.478 4.43 0.00 0.00 3.51
1526 4363 3.650942 TCCTACCAACTCAATCAACCAGT 59.349 43.478 0.00 0.00 0.00 4.00
1528 4365 3.556213 CGTCCTACCAACTCAATCAACCA 60.556 47.826 0.00 0.00 0.00 3.67
1529 4366 3.000727 CGTCCTACCAACTCAATCAACC 58.999 50.000 0.00 0.00 0.00 3.77
1531 4368 2.901192 TCCGTCCTACCAACTCAATCAA 59.099 45.455 0.00 0.00 0.00 2.57
1532 4369 2.531771 TCCGTCCTACCAACTCAATCA 58.468 47.619 0.00 0.00 0.00 2.57
1533 4370 3.492829 GGATCCGTCCTACCAACTCAATC 60.493 52.174 0.00 0.00 41.60 2.67
1534 4371 2.434702 GGATCCGTCCTACCAACTCAAT 59.565 50.000 0.00 0.00 41.60 2.57
1535 4372 1.829222 GGATCCGTCCTACCAACTCAA 59.171 52.381 0.00 0.00 41.60 3.02
1536 4373 1.272816 TGGATCCGTCCTACCAACTCA 60.273 52.381 7.39 0.00 45.32 3.41
1537 4374 1.481871 TGGATCCGTCCTACCAACTC 58.518 55.000 7.39 0.00 45.32 3.01
1556 4431 3.009033 TCAGGATCGAGAACCAAACCAAT 59.991 43.478 2.29 0.00 0.00 3.16
1566 4441 5.414360 CAACAAGAGAATCAGGATCGAGAA 58.586 41.667 0.00 0.00 37.82 2.87
1583 4458 4.562082 TCGTTGTACATCCTACCAACAAG 58.438 43.478 0.00 0.00 31.19 3.16
1657 4538 1.068753 CTCGATGCCGCATCTTCCT 59.931 57.895 26.73 0.00 38.59 3.36
1697 4578 1.781786 TCGGGGAGGAATCTCTTCAG 58.218 55.000 0.00 0.00 39.86 3.02
1765 4646 3.157217 GATCTCGCGGCCCAGATGT 62.157 63.158 12.23 0.00 29.01 3.06
2184 5085 1.144936 CCCGGTGATGCTTCTCCTC 59.855 63.158 16.09 0.00 34.06 3.71
2246 5147 1.357991 GCTTCTTGGCTCTCTCGCAC 61.358 60.000 0.00 0.00 0.00 5.34
2255 5156 3.851051 GCTCAGTAGCTTCTTGGCT 57.149 52.632 0.00 0.00 45.85 4.75
2378 5293 6.464892 CCACTATTTCCATTGCTCTCTCCATA 60.465 42.308 0.00 0.00 0.00 2.74
2419 5334 1.774217 TGGGAAGTGGGAGCACCTT 60.774 57.895 0.00 0.00 41.11 3.50
2543 5460 1.689273 GCGTCCTCATCCCTGATTAGT 59.311 52.381 0.00 0.00 0.00 2.24
2618 5535 4.551671 ACACTCCTCCATAGTAGCATTCT 58.448 43.478 0.00 0.00 0.00 2.40
2680 5597 9.006839 CACTTCGTAGGTGTAGGATTACATATA 57.993 37.037 0.00 0.00 41.56 0.86
2681 5598 7.504911 ACACTTCGTAGGTGTAGGATTACATAT 59.495 37.037 8.48 0.00 44.72 1.78
2682 5599 6.830324 ACACTTCGTAGGTGTAGGATTACATA 59.170 38.462 8.48 0.00 44.72 2.29
2683 5600 5.655532 ACACTTCGTAGGTGTAGGATTACAT 59.344 40.000 8.48 0.00 44.72 2.29
2684 5601 5.012239 ACACTTCGTAGGTGTAGGATTACA 58.988 41.667 8.48 0.00 44.72 2.41
2685 5602 5.573337 ACACTTCGTAGGTGTAGGATTAC 57.427 43.478 8.48 0.00 44.72 1.89
2686 5603 6.183360 CGTAACACTTCGTAGGTGTAGGATTA 60.183 42.308 10.06 0.00 45.64 1.75
2687 5604 5.392380 CGTAACACTTCGTAGGTGTAGGATT 60.392 44.000 10.06 0.38 45.64 3.01
2688 5605 4.095483 CGTAACACTTCGTAGGTGTAGGAT 59.905 45.833 10.06 0.65 45.64 3.24
2689 5606 3.436704 CGTAACACTTCGTAGGTGTAGGA 59.563 47.826 10.06 0.06 45.64 2.94
2691 5608 4.410492 ACGTAACACTTCGTAGGTGTAG 57.590 45.455 10.06 8.15 45.64 2.74
2692 5609 5.933187 TTACGTAACACTTCGTAGGTGTA 57.067 39.130 3.29 0.00 45.64 2.90
2694 5611 6.695292 AAATTACGTAACACTTCGTAGGTG 57.305 37.500 10.81 0.00 42.09 4.00
2696 5613 7.005380 CACAAAATTACGTAACACTTCGTAGG 58.995 38.462 10.81 0.00 42.09 3.18
2697 5614 7.733011 GTCACAAAATTACGTAACACTTCGTAG 59.267 37.037 10.81 0.00 42.09 3.51
2698 5615 7.554732 GTCACAAAATTACGTAACACTTCGTA 58.445 34.615 10.81 0.00 40.70 3.43
2699 5616 6.413269 GTCACAAAATTACGTAACACTTCGT 58.587 36.000 10.81 0.89 42.82 3.85
2700 5617 5.553722 CGTCACAAAATTACGTAACACTTCG 59.446 40.000 10.81 5.11 32.16 3.79
2710 5627 5.019498 GGAATGCTACGTCACAAAATTACG 58.981 41.667 0.00 0.00 42.17 3.18
2711 5628 6.092259 AGAGGAATGCTACGTCACAAAATTAC 59.908 38.462 0.00 0.00 0.00 1.89
2713 5630 5.003804 AGAGGAATGCTACGTCACAAAATT 58.996 37.500 0.00 0.00 0.00 1.82
2714 5631 4.579869 AGAGGAATGCTACGTCACAAAAT 58.420 39.130 0.00 0.00 0.00 1.82
2715 5632 4.002906 AGAGGAATGCTACGTCACAAAA 57.997 40.909 0.00 0.00 0.00 2.44
2716 5633 3.678056 AGAGGAATGCTACGTCACAAA 57.322 42.857 0.00 0.00 0.00 2.83
2717 5634 3.678056 AAGAGGAATGCTACGTCACAA 57.322 42.857 0.00 0.00 0.00 3.33
2718 5635 4.794278 TTAAGAGGAATGCTACGTCACA 57.206 40.909 0.00 0.00 0.00 3.58
2719 5636 6.043411 AGAATTAAGAGGAATGCTACGTCAC 58.957 40.000 0.00 0.00 0.00 3.67
2722 5639 6.472686 AGAGAATTAAGAGGAATGCTACGT 57.527 37.500 0.00 0.00 0.00 3.57
2723 5640 7.757624 GGATAGAGAATTAAGAGGAATGCTACG 59.242 40.741 0.00 0.00 0.00 3.51
2724 5641 8.996024 GGATAGAGAATTAAGAGGAATGCTAC 57.004 38.462 0.00 0.00 0.00 3.58
3083 6000 2.162408 AGGTTGGCTACGTACGTCTTAC 59.838 50.000 26.53 15.75 0.00 2.34
3084 6001 2.162208 CAGGTTGGCTACGTACGTCTTA 59.838 50.000 26.53 6.69 0.00 2.10
3085 6002 1.068055 CAGGTTGGCTACGTACGTCTT 60.068 52.381 26.53 2.59 0.00 3.01
3086 6003 0.524862 CAGGTTGGCTACGTACGTCT 59.475 55.000 26.53 11.05 0.00 4.18
3087 6004 1.074872 GCAGGTTGGCTACGTACGTC 61.075 60.000 26.53 11.62 0.00 4.34
3088 6005 1.080298 GCAGGTTGGCTACGTACGT 60.080 57.895 25.98 25.98 0.00 3.57
3089 6006 1.076533 CTGCAGGTTGGCTACGTACG 61.077 60.000 15.01 15.01 34.04 3.67
3090 6007 0.739813 CCTGCAGGTTGGCTACGTAC 60.740 60.000 25.53 0.00 34.04 3.67
3091 6008 0.901114 TCCTGCAGGTTGGCTACGTA 60.901 55.000 31.58 5.96 36.34 3.57
3092 6009 2.172483 CTCCTGCAGGTTGGCTACGT 62.172 60.000 31.58 0.00 36.34 3.57
3093 6010 1.448540 CTCCTGCAGGTTGGCTACG 60.449 63.158 31.58 3.44 36.34 3.51
3094 6011 0.902531 TACTCCTGCAGGTTGGCTAC 59.097 55.000 31.58 0.00 36.34 3.58
3095 6012 1.195115 CTACTCCTGCAGGTTGGCTA 58.805 55.000 31.58 11.07 36.34 3.93
3096 6013 0.838122 ACTACTCCTGCAGGTTGGCT 60.838 55.000 31.58 13.06 36.34 4.75
3097 6014 0.902531 TACTACTCCTGCAGGTTGGC 59.097 55.000 31.58 0.00 36.34 4.52
3098 6015 3.535561 CAATACTACTCCTGCAGGTTGG 58.464 50.000 31.58 22.53 36.34 3.77
3099 6016 2.939103 GCAATACTACTCCTGCAGGTTG 59.061 50.000 31.58 25.07 34.87 3.77
3100 6017 2.840651 AGCAATACTACTCCTGCAGGTT 59.159 45.455 31.58 21.59 37.26 3.50
3101 6018 2.432510 GAGCAATACTACTCCTGCAGGT 59.567 50.000 31.58 16.78 37.26 4.00
3102 6019 2.544694 CGAGCAATACTACTCCTGCAGG 60.545 54.545 27.87 27.87 37.26 4.85
3103 6020 2.099921 ACGAGCAATACTACTCCTGCAG 59.900 50.000 6.78 6.78 37.26 4.41
3104 6021 2.100197 ACGAGCAATACTACTCCTGCA 58.900 47.619 0.00 0.00 37.26 4.41
3105 6022 2.873133 ACGAGCAATACTACTCCTGC 57.127 50.000 0.00 0.00 34.96 4.85
3106 6023 6.555812 TGTATACGAGCAATACTACTCCTG 57.444 41.667 0.00 0.00 32.19 3.86
3107 6024 6.374894 GGATGTATACGAGCAATACTACTCCT 59.625 42.308 0.00 0.00 32.19 3.69
3108 6025 6.404513 GGGATGTATACGAGCAATACTACTCC 60.405 46.154 0.00 1.17 32.19 3.85
3109 6026 6.374894 AGGGATGTATACGAGCAATACTACTC 59.625 42.308 0.00 0.00 32.19 2.59
3110 6027 6.246919 AGGGATGTATACGAGCAATACTACT 58.753 40.000 0.00 0.00 32.19 2.57
3111 6028 6.512342 AGGGATGTATACGAGCAATACTAC 57.488 41.667 0.00 0.00 32.19 2.73
3112 6029 8.640063 TTTAGGGATGTATACGAGCAATACTA 57.360 34.615 0.00 0.00 32.19 1.82
3113 6030 7.534723 TTTAGGGATGTATACGAGCAATACT 57.465 36.000 0.00 0.00 32.19 2.12
3114 6031 8.597662 TTTTTAGGGATGTATACGAGCAATAC 57.402 34.615 0.00 0.00 0.00 1.89
3139 6056 9.672673 ACACTCTTCATGTATACTAGCAAATTT 57.327 29.630 4.17 0.00 0.00 1.82
3140 6057 9.102757 CACACTCTTCATGTATACTAGCAAATT 57.897 33.333 4.17 0.00 0.00 1.82
3141 6058 7.712639 CCACACTCTTCATGTATACTAGCAAAT 59.287 37.037 4.17 0.00 0.00 2.32
3142 6059 7.041721 CCACACTCTTCATGTATACTAGCAAA 58.958 38.462 4.17 0.00 0.00 3.68
3143 6060 6.573434 CCACACTCTTCATGTATACTAGCAA 58.427 40.000 4.17 0.00 0.00 3.91
3144 6061 5.451937 GCCACACTCTTCATGTATACTAGCA 60.452 44.000 4.17 0.00 0.00 3.49
3145 6062 4.985409 GCCACACTCTTCATGTATACTAGC 59.015 45.833 4.17 0.00 0.00 3.42
3146 6063 6.398234 AGCCACACTCTTCATGTATACTAG 57.602 41.667 4.17 0.00 0.00 2.57
3147 6064 6.490381 CCTAGCCACACTCTTCATGTATACTA 59.510 42.308 4.17 0.00 0.00 1.82
3148 6065 5.303078 CCTAGCCACACTCTTCATGTATACT 59.697 44.000 4.17 0.00 0.00 2.12
3149 6066 5.069251 ACCTAGCCACACTCTTCATGTATAC 59.931 44.000 0.00 0.00 0.00 1.47
3150 6067 5.208890 ACCTAGCCACACTCTTCATGTATA 58.791 41.667 0.00 0.00 0.00 1.47
3151 6068 4.033709 ACCTAGCCACACTCTTCATGTAT 58.966 43.478 0.00 0.00 0.00 2.29
3152 6069 3.441101 ACCTAGCCACACTCTTCATGTA 58.559 45.455 0.00 0.00 0.00 2.29
3153 6070 2.234908 GACCTAGCCACACTCTTCATGT 59.765 50.000 0.00 0.00 0.00 3.21
3154 6071 2.499289 AGACCTAGCCACACTCTTCATG 59.501 50.000 0.00 0.00 0.00 3.07
3155 6072 2.826488 AGACCTAGCCACACTCTTCAT 58.174 47.619 0.00 0.00 0.00 2.57
3156 6073 2.310779 AGACCTAGCCACACTCTTCA 57.689 50.000 0.00 0.00 0.00 3.02
3157 6074 3.764972 ACTAAGACCTAGCCACACTCTTC 59.235 47.826 0.00 0.00 0.00 2.87
3158 6075 3.764972 GACTAAGACCTAGCCACACTCTT 59.235 47.826 0.00 0.00 0.00 2.85
3159 6076 3.358118 GACTAAGACCTAGCCACACTCT 58.642 50.000 0.00 0.00 0.00 3.24
3160 6077 2.097791 CGACTAAGACCTAGCCACACTC 59.902 54.545 0.00 0.00 0.00 3.51
3161 6078 2.093106 CGACTAAGACCTAGCCACACT 58.907 52.381 0.00 0.00 0.00 3.55
3162 6079 2.089980 TCGACTAAGACCTAGCCACAC 58.910 52.381 0.00 0.00 0.00 3.82
3163 6080 2.089980 GTCGACTAAGACCTAGCCACA 58.910 52.381 8.70 0.00 35.22 4.17
3164 6081 2.097791 CAGTCGACTAAGACCTAGCCAC 59.902 54.545 19.57 0.00 41.83 5.01
3165 6082 2.026542 TCAGTCGACTAAGACCTAGCCA 60.027 50.000 19.57 0.00 41.83 4.75
3166 6083 2.614983 CTCAGTCGACTAAGACCTAGCC 59.385 54.545 19.57 0.00 41.83 3.93
3167 6084 3.533547 TCTCAGTCGACTAAGACCTAGC 58.466 50.000 19.57 0.00 41.83 3.42
3168 6085 6.687081 AAATCTCAGTCGACTAAGACCTAG 57.313 41.667 20.77 4.75 41.83 3.02
3169 6086 7.066766 GGTTAAATCTCAGTCGACTAAGACCTA 59.933 40.741 20.77 11.78 41.83 3.08
3170 6087 6.127675 GGTTAAATCTCAGTCGACTAAGACCT 60.128 42.308 20.77 12.74 41.83 3.85
3171 6088 6.035217 GGTTAAATCTCAGTCGACTAAGACC 58.965 44.000 20.77 13.45 41.83 3.85
3207 6126 4.334481 TCTCTTGCATGCATGTTATGTCAG 59.666 41.667 26.79 16.42 0.00 3.51
3222 6141 7.333921 TGCAAAATTTTCTTTTTCTCTCTTGCA 59.666 29.630 0.00 0.44 0.00 4.08
3223 6142 7.637519 GTGCAAAATTTTCTTTTTCTCTCTTGC 59.362 33.333 0.00 0.00 0.00 4.01
3224 6143 7.842721 CGTGCAAAATTTTCTTTTTCTCTCTTG 59.157 33.333 0.00 0.00 0.00 3.02
3225 6144 7.010460 CCGTGCAAAATTTTCTTTTTCTCTCTT 59.990 33.333 0.00 0.00 0.00 2.85
3226 6145 6.476706 CCGTGCAAAATTTTCTTTTTCTCTCT 59.523 34.615 0.00 0.00 0.00 3.10
3227 6146 6.475402 TCCGTGCAAAATTTTCTTTTTCTCTC 59.525 34.615 0.00 0.00 0.00 3.20
3242 6161 9.391006 AGATATTACTTTAAGATCCGTGCAAAA 57.609 29.630 0.00 0.00 37.15 2.44
3245 6164 7.652105 GTGAGATATTACTTTAAGATCCGTGCA 59.348 37.037 0.00 0.00 37.15 4.57
3246 6165 7.148950 CGTGAGATATTACTTTAAGATCCGTGC 60.149 40.741 0.00 0.00 37.15 5.34
3247 6166 7.326305 CCGTGAGATATTACTTTAAGATCCGTG 59.674 40.741 0.00 0.00 37.15 4.94
3248 6167 7.230108 TCCGTGAGATATTACTTTAAGATCCGT 59.770 37.037 0.00 0.00 37.15 4.69
3249 6168 7.591165 TCCGTGAGATATTACTTTAAGATCCG 58.409 38.462 0.00 0.00 37.15 4.18
3250 6169 9.360093 CATCCGTGAGATATTACTTTAAGATCC 57.640 37.037 0.00 0.00 37.15 3.36
3251 6170 9.915629 ACATCCGTGAGATATTACTTTAAGATC 57.084 33.333 0.00 0.00 36.82 2.75
3254 6173 9.130312 GCTACATCCGTGAGATATTACTTTAAG 57.870 37.037 0.00 0.00 32.37 1.85
3255 6174 8.635328 TGCTACATCCGTGAGATATTACTTTAA 58.365 33.333 0.00 0.00 32.37 1.52
3256 6175 8.173542 TGCTACATCCGTGAGATATTACTTTA 57.826 34.615 0.00 0.00 32.37 1.85
3257 6176 7.050970 TGCTACATCCGTGAGATATTACTTT 57.949 36.000 0.00 0.00 32.37 2.66
3258 6177 6.650427 TGCTACATCCGTGAGATATTACTT 57.350 37.500 0.00 0.00 32.37 2.24
3259 6178 6.403746 CGATGCTACATCCGTGAGATATTACT 60.404 42.308 2.15 0.00 32.37 2.24
3260 6179 5.739630 CGATGCTACATCCGTGAGATATTAC 59.260 44.000 2.15 0.00 32.37 1.89
3261 6180 5.646360 TCGATGCTACATCCGTGAGATATTA 59.354 40.000 2.15 0.00 32.37 0.98
3262 6181 4.459337 TCGATGCTACATCCGTGAGATATT 59.541 41.667 2.15 0.00 32.37 1.28
3263 6182 4.010349 TCGATGCTACATCCGTGAGATAT 58.990 43.478 2.15 0.00 32.37 1.63
3264 6183 3.408634 TCGATGCTACATCCGTGAGATA 58.591 45.455 2.15 0.00 32.37 1.98
3265 6184 2.230660 TCGATGCTACATCCGTGAGAT 58.769 47.619 2.15 0.00 34.66 2.75
3266 6185 1.675552 TCGATGCTACATCCGTGAGA 58.324 50.000 2.15 0.00 0.00 3.27
3267 6186 2.713895 ATCGATGCTACATCCGTGAG 57.286 50.000 0.00 0.00 0.00 3.51
3268 6187 4.783764 ATAATCGATGCTACATCCGTGA 57.216 40.909 0.00 0.00 0.00 4.35
3269 6188 6.944557 TTAATAATCGATGCTACATCCGTG 57.055 37.500 0.00 0.00 0.00 4.94
3270 6189 7.360101 GCTTTTAATAATCGATGCTACATCCGT 60.360 37.037 0.00 0.00 0.00 4.69
3271 6190 6.955963 GCTTTTAATAATCGATGCTACATCCG 59.044 38.462 0.00 0.00 0.00 4.18
3272 6191 7.119846 AGGCTTTTAATAATCGATGCTACATCC 59.880 37.037 0.00 0.00 0.00 3.51
3273 6192 7.959651 CAGGCTTTTAATAATCGATGCTACATC 59.040 37.037 0.00 0.00 0.00 3.06
3274 6193 7.445402 ACAGGCTTTTAATAATCGATGCTACAT 59.555 33.333 0.00 0.00 0.00 2.29
3275 6194 6.765989 ACAGGCTTTTAATAATCGATGCTACA 59.234 34.615 0.00 0.00 0.00 2.74
3276 6195 7.190920 ACAGGCTTTTAATAATCGATGCTAC 57.809 36.000 0.00 0.00 0.00 3.58
3277 6196 7.801716 AACAGGCTTTTAATAATCGATGCTA 57.198 32.000 0.00 0.00 0.00 3.49
3278 6197 6.699575 AACAGGCTTTTAATAATCGATGCT 57.300 33.333 0.00 0.00 0.00 3.79
3279 6198 6.198966 CCAAACAGGCTTTTAATAATCGATGC 59.801 38.462 0.00 0.00 0.00 3.91
3280 6199 7.684062 CCAAACAGGCTTTTAATAATCGATG 57.316 36.000 0.00 0.00 0.00 3.84
3296 6215 1.954528 CAGAGCAGTGCCAAACAGG 59.045 57.895 12.58 0.00 41.84 4.00
3297 6216 1.170919 AGCAGAGCAGTGCCAAACAG 61.171 55.000 12.58 0.00 45.20 3.16
3298 6217 1.152902 AGCAGAGCAGTGCCAAACA 60.153 52.632 12.58 0.00 45.20 2.83
3299 6218 1.578423 GAGCAGAGCAGTGCCAAAC 59.422 57.895 12.58 0.00 45.20 2.93
3300 6219 1.601759 GGAGCAGAGCAGTGCCAAA 60.602 57.895 12.58 0.00 45.20 3.28
3301 6220 2.033141 GGAGCAGAGCAGTGCCAA 59.967 61.111 12.58 0.00 45.20 4.52
3302 6221 1.194121 TAAGGAGCAGAGCAGTGCCA 61.194 55.000 12.58 0.00 45.20 4.92
3303 6222 0.036010 TTAAGGAGCAGAGCAGTGCC 60.036 55.000 12.58 3.25 45.20 5.01
3304 6223 1.813513 TTTAAGGAGCAGAGCAGTGC 58.186 50.000 7.13 7.13 44.35 4.40
3305 6224 4.005650 TCATTTTAAGGAGCAGAGCAGTG 58.994 43.478 0.00 0.00 0.00 3.66
3306 6225 4.292186 TCATTTTAAGGAGCAGAGCAGT 57.708 40.909 0.00 0.00 0.00 4.40
3307 6226 4.940046 TCTTCATTTTAAGGAGCAGAGCAG 59.060 41.667 0.00 0.00 0.00 4.24
3308 6227 4.910195 TCTTCATTTTAAGGAGCAGAGCA 58.090 39.130 0.00 0.00 0.00 4.26
3309 6228 5.886960 TTCTTCATTTTAAGGAGCAGAGC 57.113 39.130 0.00 0.00 0.00 4.09
3310 6229 6.072286 TGCTTTCTTCATTTTAAGGAGCAGAG 60.072 38.462 9.78 0.00 39.20 3.35
3311 6230 5.769662 TGCTTTCTTCATTTTAAGGAGCAGA 59.230 36.000 9.78 0.00 39.20 4.26
3312 6231 6.017400 TGCTTTCTTCATTTTAAGGAGCAG 57.983 37.500 9.78 0.00 39.20 4.24
3313 6232 5.536161 ACTGCTTTCTTCATTTTAAGGAGCA 59.464 36.000 0.00 11.95 40.46 4.26
3314 6233 6.018589 ACTGCTTTCTTCATTTTAAGGAGC 57.981 37.500 0.00 0.00 38.97 4.70
3315 6234 7.094634 TGCTACTGCTTTCTTCATTTTAAGGAG 60.095 37.037 0.00 0.00 40.54 3.69
3316 6235 6.714810 TGCTACTGCTTTCTTCATTTTAAGGA 59.285 34.615 0.00 0.00 40.48 3.36
3317 6236 6.913170 TGCTACTGCTTTCTTCATTTTAAGG 58.087 36.000 0.00 0.00 40.48 2.69
3318 6237 8.857216 CATTGCTACTGCTTTCTTCATTTTAAG 58.143 33.333 0.00 0.00 40.48 1.85
3319 6238 8.575589 TCATTGCTACTGCTTTCTTCATTTTAA 58.424 29.630 0.00 0.00 40.48 1.52
3320 6239 8.109705 TCATTGCTACTGCTTTCTTCATTTTA 57.890 30.769 0.00 0.00 40.48 1.52
3321 6240 6.985117 TCATTGCTACTGCTTTCTTCATTTT 58.015 32.000 0.00 0.00 40.48 1.82
3322 6241 6.579666 TCATTGCTACTGCTTTCTTCATTT 57.420 33.333 0.00 0.00 40.48 2.32
3323 6242 6.579666 TTCATTGCTACTGCTTTCTTCATT 57.420 33.333 0.00 0.00 40.48 2.57
3324 6243 6.208204 AGTTTCATTGCTACTGCTTTCTTCAT 59.792 34.615 0.00 0.00 40.48 2.57
3325 6244 5.532406 AGTTTCATTGCTACTGCTTTCTTCA 59.468 36.000 0.00 0.00 40.48 3.02
3326 6245 5.855395 CAGTTTCATTGCTACTGCTTTCTTC 59.145 40.000 5.45 0.00 40.48 2.87
3327 6246 5.766222 CAGTTTCATTGCTACTGCTTTCTT 58.234 37.500 5.45 0.00 40.48 2.52
3328 6247 5.368256 CAGTTTCATTGCTACTGCTTTCT 57.632 39.130 5.45 0.00 40.48 2.52
3334 6253 3.058983 TCGTTGCAGTTTCATTGCTACTG 60.059 43.478 11.42 11.42 42.46 2.74
3335 6254 3.138304 TCGTTGCAGTTTCATTGCTACT 58.862 40.909 9.37 0.00 42.46 2.57
3336 6255 3.536158 TCGTTGCAGTTTCATTGCTAC 57.464 42.857 2.50 2.50 42.02 3.58
3337 6256 3.750652 TGATCGTTGCAGTTTCATTGCTA 59.249 39.130 0.00 0.00 42.02 3.49
3338 6257 2.553602 TGATCGTTGCAGTTTCATTGCT 59.446 40.909 0.00 0.00 42.02 3.91
3339 6258 2.932498 TGATCGTTGCAGTTTCATTGC 58.068 42.857 0.00 0.00 41.86 3.56
3340 6259 6.291427 GCATTATGATCGTTGCAGTTTCATTG 60.291 38.462 6.70 4.55 35.22 2.82
3341 6260 5.745294 GCATTATGATCGTTGCAGTTTCATT 59.255 36.000 6.70 0.00 35.22 2.57
3342 6261 5.066893 AGCATTATGATCGTTGCAGTTTCAT 59.933 36.000 12.87 8.10 37.56 2.57
3343 6262 4.395854 AGCATTATGATCGTTGCAGTTTCA 59.604 37.500 12.87 0.00 37.56 2.69
3344 6263 4.913376 AGCATTATGATCGTTGCAGTTTC 58.087 39.130 12.87 0.00 37.56 2.78
3345 6264 4.970662 AGCATTATGATCGTTGCAGTTT 57.029 36.364 12.87 0.00 37.56 2.66
3346 6265 6.094048 AGTTTAGCATTATGATCGTTGCAGTT 59.906 34.615 12.87 0.00 37.56 3.16
3347 6266 5.586243 AGTTTAGCATTATGATCGTTGCAGT 59.414 36.000 12.87 0.00 37.56 4.40
3348 6267 6.052840 AGTTTAGCATTATGATCGTTGCAG 57.947 37.500 12.87 0.00 37.56 4.41
3349 6268 7.065204 TGTTAGTTTAGCATTATGATCGTTGCA 59.935 33.333 12.87 0.00 37.56 4.08
3350 6269 7.406553 TGTTAGTTTAGCATTATGATCGTTGC 58.593 34.615 3.77 3.77 35.34 4.17
3351 6270 9.767684 TTTGTTAGTTTAGCATTATGATCGTTG 57.232 29.630 0.00 0.00 0.00 4.10
3353 6272 9.935682 CATTTGTTAGTTTAGCATTATGATCGT 57.064 29.630 0.00 0.00 0.00 3.73
3354 6273 9.385902 CCATTTGTTAGTTTAGCATTATGATCG 57.614 33.333 0.00 0.00 0.00 3.69
3355 6274 9.683069 CCCATTTGTTAGTTTAGCATTATGATC 57.317 33.333 0.00 0.00 0.00 2.92
3356 6275 9.200817 ACCCATTTGTTAGTTTAGCATTATGAT 57.799 29.630 0.00 0.00 0.00 2.45
3357 6276 8.588290 ACCCATTTGTTAGTTTAGCATTATGA 57.412 30.769 0.00 0.00 0.00 2.15
3358 6277 8.686334 AGACCCATTTGTTAGTTTAGCATTATG 58.314 33.333 0.00 0.00 0.00 1.90
3359 6278 8.823220 AGACCCATTTGTTAGTTTAGCATTAT 57.177 30.769 0.00 0.00 0.00 1.28
3360 6279 8.519526 CAAGACCCATTTGTTAGTTTAGCATTA 58.480 33.333 0.00 0.00 0.00 1.90
3361 6280 7.015195 ACAAGACCCATTTGTTAGTTTAGCATT 59.985 33.333 0.00 0.00 35.32 3.56
3362 6281 6.493458 ACAAGACCCATTTGTTAGTTTAGCAT 59.507 34.615 0.00 0.00 35.32 3.79
3363 6282 5.830991 ACAAGACCCATTTGTTAGTTTAGCA 59.169 36.000 0.00 0.00 35.32 3.49
3364 6283 6.327279 ACAAGACCCATTTGTTAGTTTAGC 57.673 37.500 0.00 0.00 35.32 3.09
3365 6284 6.488683 TGGACAAGACCCATTTGTTAGTTTAG 59.511 38.462 0.00 0.00 38.78 1.85
3366 6285 6.366340 TGGACAAGACCCATTTGTTAGTTTA 58.634 36.000 0.00 0.00 38.78 2.01
3367 6286 5.205056 TGGACAAGACCCATTTGTTAGTTT 58.795 37.500 0.00 0.00 38.78 2.66
3368 6287 4.798882 TGGACAAGACCCATTTGTTAGTT 58.201 39.130 0.00 0.00 38.78 2.24
3369 6288 4.447138 TGGACAAGACCCATTTGTTAGT 57.553 40.909 0.00 0.00 38.78 2.24
3370 6289 5.009631 TGATGGACAAGACCCATTTGTTAG 58.990 41.667 0.00 0.00 43.96 2.34
3371 6290 4.764823 GTGATGGACAAGACCCATTTGTTA 59.235 41.667 0.00 0.00 43.96 2.41
3372 6291 3.573967 GTGATGGACAAGACCCATTTGTT 59.426 43.478 0.00 0.00 43.96 2.83
3373 6292 3.157087 GTGATGGACAAGACCCATTTGT 58.843 45.455 0.00 0.00 43.96 2.83
3374 6293 3.156293 TGTGATGGACAAGACCCATTTG 58.844 45.455 0.00 0.00 43.96 2.32
3375 6294 3.524095 TGTGATGGACAAGACCCATTT 57.476 42.857 0.00 0.00 43.96 2.32
3376 6295 3.010472 TGATGTGATGGACAAGACCCATT 59.990 43.478 0.00 0.00 43.96 3.16
3377 6296 2.577563 TGATGTGATGGACAAGACCCAT 59.422 45.455 0.00 0.00 46.40 4.00
3378 6297 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
3379 6298 2.026822 AGTGATGTGATGGACAAGACCC 60.027 50.000 0.00 0.00 38.36 4.46
3380 6299 3.055530 AGAGTGATGTGATGGACAAGACC 60.056 47.826 0.00 0.00 38.36 3.85
3381 6300 4.199432 AGAGTGATGTGATGGACAAGAC 57.801 45.455 0.00 0.00 38.36 3.01
3382 6301 4.529769 AGAAGAGTGATGTGATGGACAAGA 59.470 41.667 0.00 0.00 38.36 3.02
3383 6302 4.829968 AGAAGAGTGATGTGATGGACAAG 58.170 43.478 0.00 0.00 38.36 3.16
3384 6303 4.897509 AGAAGAGTGATGTGATGGACAA 57.102 40.909 0.00 0.00 38.36 3.18
3385 6304 6.155049 TCATTAGAAGAGTGATGTGATGGACA 59.845 38.462 0.00 0.00 39.53 4.02
3386 6305 6.577103 TCATTAGAAGAGTGATGTGATGGAC 58.423 40.000 0.00 0.00 0.00 4.02
3387 6306 6.796785 TCATTAGAAGAGTGATGTGATGGA 57.203 37.500 0.00 0.00 0.00 3.41
3388 6307 7.422878 CATCATTAGAAGAGTGATGTGATGG 57.577 40.000 6.45 0.00 42.53 3.51
3395 6314 8.247666 TGAGATCACATCATTAGAAGAGTGAT 57.752 34.615 5.64 5.64 42.39 3.06
3396 6315 7.651027 TGAGATCACATCATTAGAAGAGTGA 57.349 36.000 0.00 0.00 37.99 3.41
3397 6316 8.890124 AATGAGATCACATCATTAGAAGAGTG 57.110 34.615 6.08 0.00 43.75 3.51
3398 6317 8.702819 TGAATGAGATCACATCATTAGAAGAGT 58.297 33.333 6.08 0.00 45.15 3.24
3399 6318 9.713713 ATGAATGAGATCACATCATTAGAAGAG 57.286 33.333 6.08 0.00 45.15 2.85
3400 6319 9.708092 GATGAATGAGATCACATCATTAGAAGA 57.292 33.333 6.08 0.00 45.15 2.87
3401 6320 9.490379 TGATGAATGAGATCACATCATTAGAAG 57.510 33.333 6.08 0.00 45.15 2.85
3402 6321 9.841295 TTGATGAATGAGATCACATCATTAGAA 57.159 29.630 13.68 6.65 45.15 2.10
3403 6322 9.841295 TTTGATGAATGAGATCACATCATTAGA 57.159 29.630 13.68 4.95 45.15 2.10
3406 6325 9.131791 TCATTTGATGAATGAGATCACATCATT 57.868 29.630 13.68 7.19 47.00 2.57
3407 6326 8.691661 TCATTTGATGAATGAGATCACATCAT 57.308 30.769 13.68 12.35 47.00 2.45
3432 6351 5.755409 TCCTAACCATAGACATGTGTTGT 57.245 39.130 1.15 0.00 42.79 3.32
3433 6352 6.402118 CGTTTCCTAACCATAGACATGTGTTG 60.402 42.308 1.15 0.54 31.85 3.33
3434 6353 5.642063 CGTTTCCTAACCATAGACATGTGTT 59.358 40.000 1.15 3.14 33.17 3.32
3435 6354 5.175859 CGTTTCCTAACCATAGACATGTGT 58.824 41.667 1.15 0.22 0.00 3.72
3436 6355 5.175859 ACGTTTCCTAACCATAGACATGTG 58.824 41.667 1.15 0.00 0.00 3.21
3437 6356 5.416271 ACGTTTCCTAACCATAGACATGT 57.584 39.130 0.00 0.00 0.00 3.21
3438 6357 6.257193 GGTTACGTTTCCTAACCATAGACATG 59.743 42.308 11.47 0.00 41.97 3.21
3439 6358 6.070653 TGGTTACGTTTCCTAACCATAGACAT 60.071 38.462 14.43 0.00 45.42 3.06
3440 6359 5.245751 TGGTTACGTTTCCTAACCATAGACA 59.754 40.000 14.43 0.00 45.42 3.41
3441 6360 5.723295 TGGTTACGTTTCCTAACCATAGAC 58.277 41.667 14.43 0.00 45.42 2.59
3442 6361 5.999205 TGGTTACGTTTCCTAACCATAGA 57.001 39.130 14.43 0.00 45.42 1.98
3447 6366 5.702209 TCAAAGATGGTTACGTTTCCTAACC 59.298 40.000 9.76 9.76 42.49 2.85
3448 6367 6.790285 TCAAAGATGGTTACGTTTCCTAAC 57.210 37.500 0.00 0.00 0.00 2.34
3449 6368 9.504708 TTTATCAAAGATGGTTACGTTTCCTAA 57.495 29.630 0.00 0.00 0.00 2.69
3450 6369 8.938906 GTTTATCAAAGATGGTTACGTTTCCTA 58.061 33.333 0.00 0.00 0.00 2.94
3451 6370 7.360607 CGTTTATCAAAGATGGTTACGTTTCCT 60.361 37.037 0.00 0.00 0.00 3.36
3452 6371 6.739550 CGTTTATCAAAGATGGTTACGTTTCC 59.260 38.462 0.00 0.00 0.00 3.13
3453 6372 7.512297 TCGTTTATCAAAGATGGTTACGTTTC 58.488 34.615 0.00 0.00 31.99 2.78
3454 6373 7.424227 TCGTTTATCAAAGATGGTTACGTTT 57.576 32.000 0.00 0.00 31.99 3.60
3455 6374 6.401796 GCTCGTTTATCAAAGATGGTTACGTT 60.402 38.462 0.00 0.00 31.99 3.99
3456 6375 5.063060 GCTCGTTTATCAAAGATGGTTACGT 59.937 40.000 0.00 0.00 31.99 3.57
3457 6376 5.291128 AGCTCGTTTATCAAAGATGGTTACG 59.709 40.000 0.00 0.00 31.58 3.18
3458 6377 6.663944 AGCTCGTTTATCAAAGATGGTTAC 57.336 37.500 0.00 0.00 0.00 2.50
3459 6378 7.553334 ACTAGCTCGTTTATCAAAGATGGTTA 58.447 34.615 0.00 0.00 0.00 2.85
3460 6379 6.407202 ACTAGCTCGTTTATCAAAGATGGTT 58.593 36.000 0.00 0.00 0.00 3.67
3461 6380 5.978814 ACTAGCTCGTTTATCAAAGATGGT 58.021 37.500 0.00 0.00 0.00 3.55
3462 6381 6.042777 TGACTAGCTCGTTTATCAAAGATGG 58.957 40.000 0.00 0.00 0.00 3.51
3463 6382 7.276658 ACTTGACTAGCTCGTTTATCAAAGATG 59.723 37.037 0.00 0.00 0.00 2.90
3464 6383 7.324178 ACTTGACTAGCTCGTTTATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
3465 6384 6.688578 ACTTGACTAGCTCGTTTATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
3466 6385 6.952935 ACTTGACTAGCTCGTTTATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
3467 6386 7.823665 TCTACTTGACTAGCTCGTTTATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
3468 6387 7.387119 TCTACTTGACTAGCTCGTTTATCAA 57.613 36.000 0.00 0.00 0.00 2.57
3469 6388 6.038382 CCTCTACTTGACTAGCTCGTTTATCA 59.962 42.308 0.00 0.00 0.00 2.15
3470 6389 6.432107 CCTCTACTTGACTAGCTCGTTTATC 58.568 44.000 0.00 0.00 0.00 1.75
3471 6390 5.221087 GCCTCTACTTGACTAGCTCGTTTAT 60.221 44.000 0.00 0.00 0.00 1.40
3472 6391 4.096081 GCCTCTACTTGACTAGCTCGTTTA 59.904 45.833 0.00 0.00 0.00 2.01
3473 6392 3.119424 GCCTCTACTTGACTAGCTCGTTT 60.119 47.826 0.00 0.00 0.00 3.60
3474 6393 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
3475 6394 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
3476 6395 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
3477 6396 5.975693 ATATGCCTCTACTTGACTAGCTC 57.024 43.478 0.00 0.00 0.00 4.09
3478 6397 6.435904 CCTAATATGCCTCTACTTGACTAGCT 59.564 42.308 0.00 0.00 0.00 3.32
3479 6398 6.350612 CCCTAATATGCCTCTACTTGACTAGC 60.351 46.154 0.00 0.00 0.00 3.42
3480 6399 6.948886 TCCCTAATATGCCTCTACTTGACTAG 59.051 42.308 0.00 0.00 0.00 2.57
3481 6400 6.720288 GTCCCTAATATGCCTCTACTTGACTA 59.280 42.308 0.00 0.00 0.00 2.59
3482 6401 5.540719 GTCCCTAATATGCCTCTACTTGACT 59.459 44.000 0.00 0.00 0.00 3.41
3483 6402 5.304614 TGTCCCTAATATGCCTCTACTTGAC 59.695 44.000 0.00 0.00 0.00 3.18
3484 6403 5.304614 GTGTCCCTAATATGCCTCTACTTGA 59.695 44.000 0.00 0.00 0.00 3.02
3485 6404 5.305644 AGTGTCCCTAATATGCCTCTACTTG 59.694 44.000 0.00 0.00 0.00 3.16
3486 6405 5.468658 AGTGTCCCTAATATGCCTCTACTT 58.531 41.667 0.00 0.00 0.00 2.24
3487 6406 5.081315 AGTGTCCCTAATATGCCTCTACT 57.919 43.478 0.00 0.00 0.00 2.57
3488 6407 5.810080 AAGTGTCCCTAATATGCCTCTAC 57.190 43.478 0.00 0.00 0.00 2.59
3489 6408 5.665812 ACAAAGTGTCCCTAATATGCCTCTA 59.334 40.000 0.00 0.00 0.00 2.43
3490 6409 4.475016 ACAAAGTGTCCCTAATATGCCTCT 59.525 41.667 0.00 0.00 0.00 3.69
3491 6410 4.781934 ACAAAGTGTCCCTAATATGCCTC 58.218 43.478 0.00 0.00 0.00 4.70
3492 6411 4.862641 ACAAAGTGTCCCTAATATGCCT 57.137 40.909 0.00 0.00 0.00 4.75
3493 6412 5.914898 AAACAAAGTGTCCCTAATATGCC 57.085 39.130 0.00 0.00 0.00 4.40
3494 6413 6.586082 CACAAAACAAAGTGTCCCTAATATGC 59.414 38.462 0.00 0.00 0.00 3.14
3495 6414 7.657336 ACACAAAACAAAGTGTCCCTAATATG 58.343 34.615 0.00 0.00 45.16 1.78
3496 6415 7.833285 ACACAAAACAAAGTGTCCCTAATAT 57.167 32.000 0.00 0.00 45.16 1.28
3497 6416 8.788806 CATACACAAAACAAAGTGTCCCTAATA 58.211 33.333 1.03 0.00 45.16 0.98
3498 6417 7.286775 ACATACACAAAACAAAGTGTCCCTAAT 59.713 33.333 1.03 0.00 45.16 1.73
3499 6418 6.603997 ACATACACAAAACAAAGTGTCCCTAA 59.396 34.615 1.03 0.00 45.16 2.69
3500 6419 6.123651 ACATACACAAAACAAAGTGTCCCTA 58.876 36.000 1.03 0.00 45.16 3.53
3501 6420 4.953579 ACATACACAAAACAAAGTGTCCCT 59.046 37.500 1.03 0.00 45.16 4.20
3502 6421 5.257082 ACATACACAAAACAAAGTGTCCC 57.743 39.130 1.03 0.00 45.16 4.46
3503 6422 8.132362 TGAATACATACACAAAACAAAGTGTCC 58.868 33.333 1.03 0.00 45.16 4.02
3504 6423 8.953990 GTGAATACATACACAAAACAAAGTGTC 58.046 33.333 1.03 0.00 45.16 3.67
3506 6425 8.742188 GTGTGAATACATACACAAAACAAAGTG 58.258 33.333 0.00 0.00 46.17 3.16
3507 6426 8.850454 GTGTGAATACATACACAAAACAAAGT 57.150 30.769 0.00 0.00 46.17 2.66
3522 6441 9.549078 TGAAAACTTAGTACATGTGTGAATACA 57.451 29.630 9.11 0.00 34.63 2.29
3621 6540 4.349342 AGTGAAGGAAATATGCCCTAGAGG 59.651 45.833 0.00 0.00 39.47 3.69
3622 6541 5.559148 AGTGAAGGAAATATGCCCTAGAG 57.441 43.478 0.00 0.00 31.36 2.43
3623 6542 5.975988 AAGTGAAGGAAATATGCCCTAGA 57.024 39.130 0.00 0.00 31.36 2.43
3624 6543 7.389053 GTCATAAGTGAAGGAAATATGCCCTAG 59.611 40.741 0.00 0.00 35.80 3.02
3625 6544 7.224297 GTCATAAGTGAAGGAAATATGCCCTA 58.776 38.462 0.00 0.00 35.80 3.53
3626 6545 6.064717 GTCATAAGTGAAGGAAATATGCCCT 58.935 40.000 0.00 0.00 35.80 5.19
3627 6546 5.241728 GGTCATAAGTGAAGGAAATATGCCC 59.758 44.000 0.00 0.00 35.80 5.36
3628 6547 6.064717 AGGTCATAAGTGAAGGAAATATGCC 58.935 40.000 0.00 0.00 35.80 4.40
3629 6548 7.573968 AAGGTCATAAGTGAAGGAAATATGC 57.426 36.000 0.00 0.00 35.80 3.14
3636 6555 9.613428 CACAAATATAAGGTCATAAGTGAAGGA 57.387 33.333 0.00 0.00 35.80 3.36
3637 6556 9.613428 TCACAAATATAAGGTCATAAGTGAAGG 57.387 33.333 0.00 0.00 35.80 3.46
3640 6559 9.476202 CGATCACAAATATAAGGTCATAAGTGA 57.524 33.333 0.00 0.00 36.80 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.