Multiple sequence alignment - TraesCS4D01G338000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G338000 chr4D 100.000 3704 0 0 1 3704 495977705 495981408 0.000000e+00 6841.0
1 TraesCS4D01G338000 chr4D 76.735 1311 277 22 1374 2667 494877376 494878675 0.000000e+00 706.0
2 TraesCS4D01G338000 chr4D 76.344 1302 258 44 1389 2667 494850792 494852066 0.000000e+00 652.0
3 TraesCS4D01G338000 chr4D 99.394 165 1 0 668 832 274547953 274548117 2.160000e-77 300.0
4 TraesCS4D01G338000 chr4B 95.304 2023 46 13 831 2844 635867430 635869412 0.000000e+00 3164.0
5 TraesCS4D01G338000 chr4B 91.379 580 21 12 2860 3429 635869570 635870130 0.000000e+00 767.0
6 TraesCS4D01G338000 chr4B 76.310 1317 268 33 1377 2665 634981470 634982770 0.000000e+00 664.0
7 TraesCS4D01G338000 chr4B 76.216 1316 268 35 1380 2665 634460638 634459338 0.000000e+00 654.0
8 TraesCS4D01G338000 chr4B 76.358 1307 246 53 1389 2667 634765089 634766360 0.000000e+00 643.0
9 TraesCS4D01G338000 chr4B 75.957 1306 256 51 1389 2670 634727481 634726210 1.460000e-173 619.0
10 TraesCS4D01G338000 chr4B 87.977 524 35 15 9 514 635866821 635867334 8.860000e-166 593.0
11 TraesCS4D01G338000 chr4B 97.561 41 1 0 626 666 635867388 635867428 1.850000e-08 71.3
12 TraesCS4D01G338000 chrUn 95.016 1525 48 11 1445 2957 64849541 64851049 0.000000e+00 2370.0
13 TraesCS4D01G338000 chrUn 93.452 168 11 0 668 835 8823327 8823160 2.210000e-62 250.0
14 TraesCS4D01G338000 chr5A 76.782 1361 276 34 1327 2667 674576371 674577711 0.000000e+00 726.0
15 TraesCS4D01G338000 chr5A 89.219 538 32 11 2953 3482 675479760 675480279 0.000000e+00 649.0
16 TraesCS4D01G338000 chr5A 76.037 1302 259 46 1389 2667 674371642 674372913 8.730000e-176 627.0
17 TraesCS4D01G338000 chr5A 90.000 190 15 3 665 853 682928713 682928527 3.700000e-60 243.0
18 TraesCS4D01G338000 chr3A 74.633 1293 257 56 1389 2647 711115623 711116878 4.270000e-139 505.0
19 TraesCS4D01G338000 chr3A 74.179 1309 278 52 1389 2666 711253588 711252309 1.200000e-134 490.0
20 TraesCS4D01G338000 chr3B 73.939 1320 287 50 1382 2670 766636487 766635194 2.590000e-131 479.0
21 TraesCS4D01G338000 chr1D 98.193 166 3 0 661 826 391642517 391642352 1.300000e-74 291.0
22 TraesCS4D01G338000 chr1D 93.478 92 4 2 3612 3701 462905402 462905311 6.450000e-28 135.0
23 TraesCS4D01G338000 chr1D 93.478 92 4 2 3612 3701 462907945 462907854 6.450000e-28 135.0
24 TraesCS4D01G338000 chr2B 95.783 166 7 0 668 833 208426745 208426580 6.100000e-68 268.0
25 TraesCS4D01G338000 chr2B 91.753 97 6 2 3609 3704 45554103 45554198 2.320000e-27 134.0
26 TraesCS4D01G338000 chr2B 90.099 101 8 2 3604 3704 282939883 282939981 3.000000e-26 130.0
27 TraesCS4D01G338000 chr7B 93.567 171 11 0 664 834 332819093 332818923 4.750000e-64 255.0
28 TraesCS4D01G338000 chr7B 93.567 171 11 0 665 835 595442061 595441891 4.750000e-64 255.0
29 TraesCS4D01G338000 chr6D 92.697 178 11 2 657 834 293177231 293177406 4.750000e-64 255.0
30 TraesCS4D01G338000 chr6D 90.196 153 10 5 3467 3616 447445702 447445852 1.050000e-45 195.0
31 TraesCS4D01G338000 chr4A 93.023 172 12 0 664 835 30396707 30396536 6.140000e-63 252.0
32 TraesCS4D01G338000 chr7D 94.318 88 5 0 3617 3704 197173956 197173869 6.450000e-28 135.0
33 TraesCS4D01G338000 chr7D 90.909 99 5 3 3605 3701 197173096 197173192 3.000000e-26 130.0
34 TraesCS4D01G338000 chr3D 94.318 88 5 0 3617 3704 549723838 549723925 6.450000e-28 135.0
35 TraesCS4D01G338000 chr7A 90.291 103 8 2 3603 3704 717468473 717468372 2.320000e-27 134.0
36 TraesCS4D01G338000 chr6A 92.473 93 7 0 3612 3704 593955927 593956019 2.320000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G338000 chr4D 495977705 495981408 3703 False 6841.000 6841 100.00000 1 3704 1 chr4D.!!$F4 3703
1 TraesCS4D01G338000 chr4D 494877376 494878675 1299 False 706.000 706 76.73500 1374 2667 1 chr4D.!!$F3 1293
2 TraesCS4D01G338000 chr4D 494850792 494852066 1274 False 652.000 652 76.34400 1389 2667 1 chr4D.!!$F2 1278
3 TraesCS4D01G338000 chr4B 635866821 635870130 3309 False 1148.825 3164 93.05525 9 3429 4 chr4B.!!$F3 3420
4 TraesCS4D01G338000 chr4B 634981470 634982770 1300 False 664.000 664 76.31000 1377 2665 1 chr4B.!!$F2 1288
5 TraesCS4D01G338000 chr4B 634459338 634460638 1300 True 654.000 654 76.21600 1380 2665 1 chr4B.!!$R1 1285
6 TraesCS4D01G338000 chr4B 634765089 634766360 1271 False 643.000 643 76.35800 1389 2667 1 chr4B.!!$F1 1278
7 TraesCS4D01G338000 chr4B 634726210 634727481 1271 True 619.000 619 75.95700 1389 2670 1 chr4B.!!$R2 1281
8 TraesCS4D01G338000 chrUn 64849541 64851049 1508 False 2370.000 2370 95.01600 1445 2957 1 chrUn.!!$F1 1512
9 TraesCS4D01G338000 chr5A 674576371 674577711 1340 False 726.000 726 76.78200 1327 2667 1 chr5A.!!$F2 1340
10 TraesCS4D01G338000 chr5A 675479760 675480279 519 False 649.000 649 89.21900 2953 3482 1 chr5A.!!$F3 529
11 TraesCS4D01G338000 chr5A 674371642 674372913 1271 False 627.000 627 76.03700 1389 2667 1 chr5A.!!$F1 1278
12 TraesCS4D01G338000 chr3A 711115623 711116878 1255 False 505.000 505 74.63300 1389 2647 1 chr3A.!!$F1 1258
13 TraesCS4D01G338000 chr3A 711252309 711253588 1279 True 490.000 490 74.17900 1389 2666 1 chr3A.!!$R1 1277
14 TraesCS4D01G338000 chr3B 766635194 766636487 1293 True 479.000 479 73.93900 1382 2670 1 chr3B.!!$R1 1288

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 194 0.179081 CTCGACGGGGATTCCTTTCC 60.179 60.0 2.01 0.0 34.83 3.13 F
538 555 0.246910 TAGTACGCGCATGAAACCCA 59.753 50.0 5.73 0.0 0.00 4.51 F
900 919 0.248498 CTCGTGTCATGGCGTCGTAT 60.248 55.0 12.84 0.0 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1181 1200 1.000771 AGTAGCACGAGGAGGCAGA 60.001 57.895 0.0 0.0 0.0 4.26 R
1950 1984 4.681978 GACTTGTCCGCGCCCTGT 62.682 66.667 0.0 0.0 0.0 4.00 R
2794 2856 0.035534 ACCTGCACACACACAGACAA 60.036 50.000 0.0 0.0 35.9 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 9.562408 TCTCTATCTAAACGTCTTATGTCTGAT 57.438 33.333 0.00 0.00 0.00 2.90
89 90 6.610741 ATTTCTTTGCCTCGACATATTCTC 57.389 37.500 0.00 0.00 0.00 2.87
96 97 2.983136 CCTCGACATATTCTCGATGCAC 59.017 50.000 0.00 0.00 39.36 4.57
130 131 2.732619 CCCCTTCCTACTCGGTGCC 61.733 68.421 0.00 0.00 0.00 5.01
131 132 1.987855 CCCTTCCTACTCGGTGCCA 60.988 63.158 0.00 0.00 0.00 4.92
133 134 1.218316 CTTCCTACTCGGTGCCACC 59.782 63.158 2.98 2.98 34.05 4.61
134 135 1.534476 TTCCTACTCGGTGCCACCA 60.534 57.895 15.45 0.08 38.47 4.17
176 192 1.221021 GCTCGACGGGGATTCCTTT 59.779 57.895 2.01 0.00 0.00 3.11
177 193 0.810426 GCTCGACGGGGATTCCTTTC 60.810 60.000 2.01 0.00 0.00 2.62
178 194 0.179081 CTCGACGGGGATTCCTTTCC 60.179 60.000 2.01 0.00 34.83 3.13
179 195 0.616679 TCGACGGGGATTCCTTTCCT 60.617 55.000 2.01 0.00 35.97 3.36
180 196 0.252197 CGACGGGGATTCCTTTCCTT 59.748 55.000 2.01 0.00 35.97 3.36
217 233 1.731433 CCATTCCCTGCTCGCCATTG 61.731 60.000 0.00 0.00 0.00 2.82
218 234 1.033746 CATTCCCTGCTCGCCATTGT 61.034 55.000 0.00 0.00 0.00 2.71
238 254 1.879380 TCAGCGAGTGGACATTTTTGG 59.121 47.619 0.00 0.00 0.00 3.28
242 258 2.604614 GCGAGTGGACATTTTTGGTCAC 60.605 50.000 0.00 0.00 37.00 3.67
246 262 0.973632 GGACATTTTTGGTCACCCCC 59.026 55.000 0.00 0.00 37.00 5.40
270 286 6.128200 CCCAAAGCAAATAAAAGCAAGATTCC 60.128 38.462 0.00 0.00 0.00 3.01
272 288 7.041235 CCAAAGCAAATAAAAGCAAGATTCCAA 60.041 33.333 0.00 0.00 0.00 3.53
274 290 9.723601 AAAGCAAATAAAAGCAAGATTCCAATA 57.276 25.926 0.00 0.00 0.00 1.90
282 298 6.610075 AAGCAAGATTCCAATAACCACATT 57.390 33.333 0.00 0.00 0.00 2.71
309 325 6.197168 ACCACTTTGAACATCCAATCCATAT 58.803 36.000 0.00 0.00 0.00 1.78
310 326 6.097270 ACCACTTTGAACATCCAATCCATATG 59.903 38.462 0.00 0.00 0.00 1.78
311 327 6.321945 CCACTTTGAACATCCAATCCATATGA 59.678 38.462 3.65 0.00 0.00 2.15
320 336 6.435277 ACATCCAATCCATATGAGGCAAATAC 59.565 38.462 3.65 0.00 0.00 1.89
472 489 2.825982 TGGGACACGTCACAAGGG 59.174 61.111 0.00 0.00 40.57 3.95
474 491 1.338890 TGGGACACGTCACAAGGGAA 61.339 55.000 0.00 0.00 40.57 3.97
509 526 5.068636 CCTCATATCATTGCAGCCTTAAGT 58.931 41.667 0.97 0.00 0.00 2.24
514 531 2.089980 CATTGCAGCCTTAAGTGAGCT 58.910 47.619 0.97 0.12 37.32 4.09
515 532 1.813513 TTGCAGCCTTAAGTGAGCTC 58.186 50.000 6.82 6.82 33.70 4.09
516 533 0.979665 TGCAGCCTTAAGTGAGCTCT 59.020 50.000 16.19 0.00 33.70 4.09
517 534 1.349026 TGCAGCCTTAAGTGAGCTCTT 59.651 47.619 16.19 4.24 33.70 2.85
518 535 2.006169 GCAGCCTTAAGTGAGCTCTTC 58.994 52.381 16.19 8.27 33.70 2.87
519 536 2.354604 GCAGCCTTAAGTGAGCTCTTCT 60.355 50.000 16.19 10.50 33.70 2.85
520 537 3.118956 GCAGCCTTAAGTGAGCTCTTCTA 60.119 47.826 16.19 0.19 33.70 2.10
521 538 4.681744 CAGCCTTAAGTGAGCTCTTCTAG 58.318 47.826 16.19 8.40 33.70 2.43
522 539 4.159506 CAGCCTTAAGTGAGCTCTTCTAGT 59.840 45.833 16.19 2.61 33.70 2.57
523 540 5.358442 CAGCCTTAAGTGAGCTCTTCTAGTA 59.642 44.000 16.19 1.70 33.70 1.82
524 541 5.358725 AGCCTTAAGTGAGCTCTTCTAGTAC 59.641 44.000 16.19 2.41 28.40 2.73
525 542 5.731126 GCCTTAAGTGAGCTCTTCTAGTACG 60.731 48.000 16.19 2.50 0.00 3.67
526 543 3.768468 AAGTGAGCTCTTCTAGTACGC 57.232 47.619 16.19 0.00 0.00 4.42
527 544 1.666700 AGTGAGCTCTTCTAGTACGCG 59.333 52.381 16.19 3.53 0.00 6.01
528 545 0.377554 TGAGCTCTTCTAGTACGCGC 59.622 55.000 16.19 0.00 0.00 6.86
529 546 0.377554 GAGCTCTTCTAGTACGCGCA 59.622 55.000 5.73 0.00 0.00 6.09
530 547 1.002251 GAGCTCTTCTAGTACGCGCAT 60.002 52.381 5.73 0.00 0.00 4.73
531 548 1.124462 GCTCTTCTAGTACGCGCATG 58.876 55.000 5.73 0.00 0.00 4.06
538 555 0.246910 TAGTACGCGCATGAAACCCA 59.753 50.000 5.73 0.00 0.00 4.51
550 567 4.683129 GCATGAAACCCAATTCCCATTACC 60.683 45.833 0.00 0.00 0.00 2.85
553 570 2.159179 ACCCAATTCCCATTACCAGC 57.841 50.000 0.00 0.00 0.00 4.85
556 573 3.117512 ACCCAATTCCCATTACCAGCTAG 60.118 47.826 0.00 0.00 0.00 3.42
577 594 5.117406 AGCTAGGGTTCTTGGGATAAAAG 57.883 43.478 0.00 0.00 0.00 2.27
578 595 4.788617 AGCTAGGGTTCTTGGGATAAAAGA 59.211 41.667 0.00 0.00 31.85 2.52
579 596 5.433381 AGCTAGGGTTCTTGGGATAAAAGAT 59.567 40.000 0.00 0.00 33.79 2.40
580 597 6.619852 AGCTAGGGTTCTTGGGATAAAAGATA 59.380 38.462 0.00 0.00 33.79 1.98
581 598 7.128883 AGCTAGGGTTCTTGGGATAAAAGATAA 59.871 37.037 0.00 0.00 33.79 1.75
582 599 7.778382 GCTAGGGTTCTTGGGATAAAAGATAAA 59.222 37.037 0.00 0.00 33.79 1.40
583 600 9.695155 CTAGGGTTCTTGGGATAAAAGATAAAA 57.305 33.333 0.00 0.00 33.79 1.52
584 601 8.362464 AGGGTTCTTGGGATAAAAGATAAAAC 57.638 34.615 0.00 0.00 33.79 2.43
585 602 7.399191 AGGGTTCTTGGGATAAAAGATAAAACC 59.601 37.037 0.00 0.00 33.79 3.27
586 603 7.364408 GGGTTCTTGGGATAAAAGATAAAACCC 60.364 40.741 7.64 7.64 39.14 4.11
587 604 7.255569 GTTCTTGGGATAAAAGATAAAACCCG 58.744 38.462 0.00 0.00 38.75 5.28
588 605 6.486941 TCTTGGGATAAAAGATAAAACCCGT 58.513 36.000 0.00 0.00 38.75 5.28
589 606 7.631933 TCTTGGGATAAAAGATAAAACCCGTA 58.368 34.615 0.00 0.00 38.75 4.02
590 607 8.276477 TCTTGGGATAAAAGATAAAACCCGTAT 58.724 33.333 0.00 0.00 38.75 3.06
604 621 1.485066 CCCGTATCCCTTGCTACTGTT 59.515 52.381 0.00 0.00 0.00 3.16
605 622 2.483188 CCCGTATCCCTTGCTACTGTTC 60.483 54.545 0.00 0.00 0.00 3.18
606 623 2.483188 CCGTATCCCTTGCTACTGTTCC 60.483 54.545 0.00 0.00 0.00 3.62
607 624 2.483188 CGTATCCCTTGCTACTGTTCCC 60.483 54.545 0.00 0.00 0.00 3.97
608 625 1.972588 ATCCCTTGCTACTGTTCCCT 58.027 50.000 0.00 0.00 0.00 4.20
609 626 2.634639 TCCCTTGCTACTGTTCCCTA 57.365 50.000 0.00 0.00 0.00 3.53
610 627 2.467880 TCCCTTGCTACTGTTCCCTAG 58.532 52.381 0.00 0.00 0.00 3.02
611 628 1.134371 CCCTTGCTACTGTTCCCTAGC 60.134 57.143 0.00 0.00 36.65 3.42
612 629 1.555075 CCTTGCTACTGTTCCCTAGCA 59.445 52.381 0.00 0.00 42.88 3.49
613 630 2.171448 CCTTGCTACTGTTCCCTAGCAT 59.829 50.000 3.29 0.00 43.76 3.79
614 631 3.388024 CCTTGCTACTGTTCCCTAGCATA 59.612 47.826 3.29 0.00 43.76 3.14
615 632 4.141711 CCTTGCTACTGTTCCCTAGCATAA 60.142 45.833 3.29 0.00 43.76 1.90
616 633 4.402056 TGCTACTGTTCCCTAGCATAAC 57.598 45.455 0.00 0.00 40.35 1.89
617 634 4.030913 TGCTACTGTTCCCTAGCATAACT 58.969 43.478 0.00 0.00 40.35 2.24
618 635 4.141937 TGCTACTGTTCCCTAGCATAACTG 60.142 45.833 0.00 0.00 40.35 3.16
619 636 3.914426 ACTGTTCCCTAGCATAACTGG 57.086 47.619 9.88 0.00 0.00 4.00
620 637 2.092914 ACTGTTCCCTAGCATAACTGGC 60.093 50.000 9.88 0.00 0.00 4.85
621 638 1.211949 TGTTCCCTAGCATAACTGGCC 59.788 52.381 0.00 0.00 0.00 5.36
622 639 1.211949 GTTCCCTAGCATAACTGGCCA 59.788 52.381 4.71 4.71 0.00 5.36
623 640 0.837272 TCCCTAGCATAACTGGCCAC 59.163 55.000 0.00 0.00 0.00 5.01
624 641 0.839946 CCCTAGCATAACTGGCCACT 59.160 55.000 0.00 0.00 0.00 4.00
625 642 1.202698 CCCTAGCATAACTGGCCACTC 60.203 57.143 0.00 0.00 0.00 3.51
626 643 1.765314 CCTAGCATAACTGGCCACTCT 59.235 52.381 0.00 0.00 0.00 3.24
627 644 2.484417 CCTAGCATAACTGGCCACTCTG 60.484 54.545 0.00 0.00 0.00 3.35
628 645 0.393537 AGCATAACTGGCCACTCTGC 60.394 55.000 0.00 9.10 0.00 4.26
666 683 5.679601 TGTGCACATACCAGATATGCTAAA 58.320 37.500 17.42 0.00 44.12 1.85
669 686 7.387673 TGTGCACATACCAGATATGCTAAATAC 59.612 37.037 17.42 0.00 44.12 1.89
670 687 7.604164 GTGCACATACCAGATATGCTAAATACT 59.396 37.037 13.17 0.00 44.12 2.12
671 688 7.819415 TGCACATACCAGATATGCTAAATACTC 59.181 37.037 0.00 0.00 44.12 2.59
672 689 7.278868 GCACATACCAGATATGCTAAATACTCC 59.721 40.741 0.00 0.00 44.12 3.85
673 690 7.766278 CACATACCAGATATGCTAAATACTCCC 59.234 40.741 0.00 0.00 44.12 4.30
674 691 7.680310 ACATACCAGATATGCTAAATACTCCCT 59.320 37.037 0.00 0.00 44.12 4.20
675 692 6.613153 ACCAGATATGCTAAATACTCCCTC 57.387 41.667 0.00 0.00 0.00 4.30
676 693 6.326970 ACCAGATATGCTAAATACTCCCTCT 58.673 40.000 0.00 0.00 0.00 3.69
677 694 6.212388 ACCAGATATGCTAAATACTCCCTCTG 59.788 42.308 0.00 0.00 0.00 3.35
678 695 6.212388 CCAGATATGCTAAATACTCCCTCTGT 59.788 42.308 0.00 0.00 0.00 3.41
679 696 7.256475 CCAGATATGCTAAATACTCCCTCTGTT 60.256 40.741 0.00 0.00 0.00 3.16
680 697 8.153550 CAGATATGCTAAATACTCCCTCTGTTT 58.846 37.037 0.00 0.00 0.00 2.83
681 698 8.371699 AGATATGCTAAATACTCCCTCTGTTTC 58.628 37.037 0.00 0.00 0.00 2.78
682 699 4.755411 TGCTAAATACTCCCTCTGTTTCG 58.245 43.478 0.00 0.00 0.00 3.46
683 700 4.464951 TGCTAAATACTCCCTCTGTTTCGA 59.535 41.667 0.00 0.00 0.00 3.71
684 701 5.046878 TGCTAAATACTCCCTCTGTTTCGAA 60.047 40.000 0.00 0.00 0.00 3.71
685 702 5.873164 GCTAAATACTCCCTCTGTTTCGAAA 59.127 40.000 6.47 6.47 0.00 3.46
686 703 6.539103 GCTAAATACTCCCTCTGTTTCGAAAT 59.461 38.462 14.69 0.00 0.00 2.17
687 704 7.709613 GCTAAATACTCCCTCTGTTTCGAAATA 59.290 37.037 14.69 10.69 0.00 1.40
688 705 9.765795 CTAAATACTCCCTCTGTTTCGAAATAT 57.234 33.333 14.69 1.65 0.00 1.28
691 708 9.765795 AATACTCCCTCTGTTTCGAAATATAAG 57.234 33.333 14.69 11.19 0.00 1.73
692 709 7.184067 ACTCCCTCTGTTTCGAAATATAAGT 57.816 36.000 14.69 8.70 0.00 2.24
693 710 7.266400 ACTCCCTCTGTTTCGAAATATAAGTC 58.734 38.462 14.69 0.00 0.00 3.01
694 711 7.124448 ACTCCCTCTGTTTCGAAATATAAGTCT 59.876 37.037 14.69 0.00 0.00 3.24
695 712 7.848128 TCCCTCTGTTTCGAAATATAAGTCTT 58.152 34.615 14.69 0.00 0.00 3.01
696 713 8.319146 TCCCTCTGTTTCGAAATATAAGTCTTT 58.681 33.333 14.69 0.00 0.00 2.52
697 714 8.947115 CCCTCTGTTTCGAAATATAAGTCTTTT 58.053 33.333 14.69 0.00 0.00 2.27
716 733 9.579932 AGTCTTTTTAGAGATTTCAAATGGACT 57.420 29.630 0.00 0.00 0.00 3.85
732 749 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
733 750 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
734 751 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
735 752 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
736 753 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
737 754 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
738 755 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
739 756 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
740 757 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
741 758 7.154435 ACCACATACGGATGTATATAGACAC 57.846 40.000 14.23 0.00 44.82 3.67
742 759 6.717997 ACCACATACGGATGTATATAGACACA 59.282 38.462 14.23 0.00 44.82 3.72
743 760 7.396339 ACCACATACGGATGTATATAGACACAT 59.604 37.037 14.23 0.00 44.82 3.21
744 761 8.251026 CCACATACGGATGTATATAGACACATT 58.749 37.037 14.23 0.00 44.82 2.71
745 762 9.639601 CACATACGGATGTATATAGACACATTT 57.360 33.333 14.23 0.00 44.82 2.32
773 790 8.897752 AGAGTGTAGATTTATTCATTTTGCTCC 58.102 33.333 0.00 0.00 0.00 4.70
774 791 7.697691 AGTGTAGATTTATTCATTTTGCTCCG 58.302 34.615 0.00 0.00 0.00 4.63
775 792 7.336931 AGTGTAGATTTATTCATTTTGCTCCGT 59.663 33.333 0.00 0.00 0.00 4.69
776 793 8.609176 GTGTAGATTTATTCATTTTGCTCCGTA 58.391 33.333 0.00 0.00 0.00 4.02
777 794 9.337396 TGTAGATTTATTCATTTTGCTCCGTAT 57.663 29.630 0.00 0.00 0.00 3.06
778 795 9.599322 GTAGATTTATTCATTTTGCTCCGTATG 57.401 33.333 0.00 0.00 0.00 2.39
779 796 8.225603 AGATTTATTCATTTTGCTCCGTATGT 57.774 30.769 0.00 0.00 0.00 2.29
780 797 9.337396 AGATTTATTCATTTTGCTCCGTATGTA 57.663 29.630 0.00 0.00 0.00 2.29
781 798 9.599322 GATTTATTCATTTTGCTCCGTATGTAG 57.401 33.333 0.00 0.00 0.00 2.74
782 799 8.500753 TTTATTCATTTTGCTCCGTATGTAGT 57.499 30.769 0.00 0.00 0.00 2.73
783 800 6.604735 ATTCATTTTGCTCCGTATGTAGTC 57.395 37.500 0.00 0.00 0.00 2.59
784 801 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
785 802 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
786 803 2.953466 TTGCTCCGTATGTAGTCACC 57.047 50.000 0.00 0.00 0.00 4.02
787 804 2.139323 TGCTCCGTATGTAGTCACCT 57.861 50.000 0.00 0.00 0.00 4.00
788 805 3.286329 TGCTCCGTATGTAGTCACCTA 57.714 47.619 0.00 0.00 0.00 3.08
789 806 3.828921 TGCTCCGTATGTAGTCACCTAT 58.171 45.455 0.00 0.00 0.00 2.57
790 807 4.212716 TGCTCCGTATGTAGTCACCTATT 58.787 43.478 0.00 0.00 0.00 1.73
791 808 4.037565 TGCTCCGTATGTAGTCACCTATTG 59.962 45.833 0.00 0.00 0.00 1.90
792 809 4.277672 GCTCCGTATGTAGTCACCTATTGA 59.722 45.833 0.00 0.00 0.00 2.57
793 810 5.221185 GCTCCGTATGTAGTCACCTATTGAA 60.221 44.000 0.00 0.00 35.39 2.69
794 811 6.682113 GCTCCGTATGTAGTCACCTATTGAAA 60.682 42.308 0.00 0.00 35.39 2.69
795 812 7.356089 TCCGTATGTAGTCACCTATTGAAAT 57.644 36.000 0.00 0.00 35.39 2.17
796 813 7.431249 TCCGTATGTAGTCACCTATTGAAATC 58.569 38.462 0.00 0.00 35.39 2.17
797 814 7.287005 TCCGTATGTAGTCACCTATTGAAATCT 59.713 37.037 0.00 0.00 35.39 2.40
798 815 7.595502 CCGTATGTAGTCACCTATTGAAATCTC 59.404 40.741 0.00 0.00 35.39 2.75
799 816 8.353684 CGTATGTAGTCACCTATTGAAATCTCT 58.646 37.037 0.00 0.00 35.39 3.10
802 819 9.647918 ATGTAGTCACCTATTGAAATCTCTAGA 57.352 33.333 0.00 0.00 35.39 2.43
803 820 9.475620 TGTAGTCACCTATTGAAATCTCTAGAA 57.524 33.333 0.00 0.00 35.39 2.10
806 823 9.261035 AGTCACCTATTGAAATCTCTAGAAAGA 57.739 33.333 0.00 0.00 35.39 2.52
807 824 9.308318 GTCACCTATTGAAATCTCTAGAAAGAC 57.692 37.037 0.00 0.00 35.39 3.01
808 825 8.478877 TCACCTATTGAAATCTCTAGAAAGACC 58.521 37.037 0.00 0.00 0.00 3.85
809 826 8.482128 CACCTATTGAAATCTCTAGAAAGACCT 58.518 37.037 0.00 0.00 0.00 3.85
810 827 9.716556 ACCTATTGAAATCTCTAGAAAGACCTA 57.283 33.333 0.00 0.00 0.00 3.08
847 864 4.162509 AGGGAGTACTTAATGGCTGTCTTC 59.837 45.833 0.00 0.00 0.00 2.87
858 875 3.686016 TGGCTGTCTTCAACTAATTCCC 58.314 45.455 0.00 0.00 0.00 3.97
876 893 1.548582 CCCTTTGCTCTTGGTGACCAT 60.549 52.381 4.56 0.00 31.53 3.55
879 896 4.019174 CCTTTGCTCTTGGTGACCATATT 58.981 43.478 4.56 0.00 31.53 1.28
898 917 2.126463 CTCGTGTCATGGCGTCGT 60.126 61.111 12.84 0.00 0.00 4.34
899 918 1.135939 CTCGTGTCATGGCGTCGTA 59.864 57.895 12.84 2.22 0.00 3.43
900 919 0.248498 CTCGTGTCATGGCGTCGTAT 60.248 55.000 12.84 0.00 0.00 3.06
901 920 1.003223 CTCGTGTCATGGCGTCGTATA 60.003 52.381 12.84 0.00 0.00 1.47
914 933 3.239941 GCGTCGTATATATGCATTCCGAC 59.760 47.826 3.54 14.01 39.66 4.79
964 983 2.052782 ATTAATTGGCCAGGGACGTC 57.947 50.000 5.11 7.13 0.00 4.34
1041 1060 3.067742 ACGTACGATTTACTGCTAGCCAT 59.932 43.478 24.41 2.29 0.00 4.40
1042 1061 3.669122 CGTACGATTTACTGCTAGCCATC 59.331 47.826 10.44 5.22 0.00 3.51
1043 1062 4.556898 CGTACGATTTACTGCTAGCCATCT 60.557 45.833 10.44 0.00 0.00 2.90
1056 1075 4.873129 CATCTCCCGTGCGTCCCG 62.873 72.222 0.00 0.00 0.00 5.14
1103 1122 1.970917 GCACGCATGTCTAGTGGTGC 61.971 60.000 12.21 0.00 43.07 5.01
1104 1123 0.670239 CACGCATGTCTAGTGGTGCA 60.670 55.000 13.45 0.00 37.44 4.57
1117 1136 4.687215 GTGCACTGCTCTCCGCCA 62.687 66.667 10.32 0.00 38.05 5.69
1118 1137 3.709633 TGCACTGCTCTCCGCCAT 61.710 61.111 1.98 0.00 38.05 4.40
1119 1138 3.200593 GCACTGCTCTCCGCCATG 61.201 66.667 0.00 0.00 38.05 3.66
1120 1139 2.513204 CACTGCTCTCCGCCATGG 60.513 66.667 7.63 7.63 38.05 3.66
1122 1141 2.202987 CTGCTCTCCGCCATGGAC 60.203 66.667 18.40 5.97 43.74 4.02
1123 1142 3.002583 TGCTCTCCGCCATGGACA 61.003 61.111 18.40 0.00 43.74 4.02
1124 1143 2.321263 CTGCTCTCCGCCATGGACAT 62.321 60.000 18.40 0.00 43.74 3.06
1125 1144 1.890979 GCTCTCCGCCATGGACATG 60.891 63.158 18.40 5.33 43.74 3.21
1146 1165 1.535444 CATGGGCATGGGCATGGAT 60.535 57.895 0.00 0.00 43.71 3.41
1147 1166 1.125093 CATGGGCATGGGCATGGATT 61.125 55.000 0.00 0.00 43.71 3.01
1181 1200 2.125512 GCTTCTCATGTCGGCCGT 60.126 61.111 27.15 1.97 0.00 5.68
1545 1564 2.970639 CGGAGCCAGAGGACGAAA 59.029 61.111 0.00 0.00 0.00 3.46
1950 1984 1.234615 GCAGAGCCGCCTACAACAAA 61.235 55.000 0.00 0.00 0.00 2.83
2601 2660 3.728373 GAGGTGGTTCCCGGGCAT 61.728 66.667 18.49 0.00 36.75 4.40
2704 2763 1.331756 CCATGATCGGCAAGCAGTAAC 59.668 52.381 0.00 0.00 0.00 2.50
2705 2764 2.283298 CATGATCGGCAAGCAGTAACT 58.717 47.619 0.00 0.00 0.00 2.24
2788 2850 7.542890 TCATTTTTATTCGGCATATGTGTGTT 58.457 30.769 4.29 0.00 0.00 3.32
2789 2851 7.487509 TCATTTTTATTCGGCATATGTGTGTTG 59.512 33.333 4.29 0.00 0.00 3.33
2790 2852 5.888691 TTTATTCGGCATATGTGTGTTGT 57.111 34.783 4.29 0.00 0.00 3.32
2791 2853 5.478233 TTATTCGGCATATGTGTGTTGTC 57.522 39.130 4.29 0.00 0.00 3.18
2792 2854 2.760634 TCGGCATATGTGTGTTGTCT 57.239 45.000 4.29 0.00 0.00 3.41
2793 2855 2.616960 TCGGCATATGTGTGTTGTCTC 58.383 47.619 4.29 0.00 0.00 3.36
2794 2856 2.233676 TCGGCATATGTGTGTTGTCTCT 59.766 45.455 4.29 0.00 0.00 3.10
2795 2857 3.002791 CGGCATATGTGTGTTGTCTCTT 58.997 45.455 4.29 0.00 0.00 2.85
2796 2858 3.181517 CGGCATATGTGTGTTGTCTCTTG 60.182 47.826 4.29 0.00 0.00 3.02
2797 2859 3.753272 GGCATATGTGTGTTGTCTCTTGT 59.247 43.478 4.29 0.00 0.00 3.16
2798 2860 4.142816 GGCATATGTGTGTTGTCTCTTGTC 60.143 45.833 4.29 0.00 0.00 3.18
2802 2864 3.261580 TGTGTGTTGTCTCTTGTCTGTG 58.738 45.455 0.00 0.00 0.00 3.66
2828 2890 5.523916 GTGTGCAGGTGTCCAGTAATATAAG 59.476 44.000 0.00 0.00 0.00 1.73
2861 2932 9.515226 GTAAATCATGGTGGGTATACATATGTT 57.485 33.333 14.77 4.83 0.00 2.71
2863 2934 8.635765 AATCATGGTGGGTATACATATGTTTC 57.364 34.615 14.77 5.01 0.00 2.78
2864 2935 6.539173 TCATGGTGGGTATACATATGTTTCC 58.461 40.000 14.77 13.22 0.00 3.13
2865 2936 6.331572 TCATGGTGGGTATACATATGTTTCCT 59.668 38.462 14.77 0.00 0.00 3.36
2867 2938 7.069877 TGGTGGGTATACATATGTTTCCTAC 57.930 40.000 14.77 18.77 0.00 3.18
2949 3160 3.911698 CGGTGGATCGATCGGGCA 61.912 66.667 18.81 8.88 0.00 5.36
2985 3196 0.106268 TGCAGAGGCTTTGGTTTCCA 60.106 50.000 7.20 0.00 41.91 3.53
2986 3197 1.039856 GCAGAGGCTTTGGTTTCCAA 58.960 50.000 7.20 0.00 42.29 3.53
3134 3345 2.027003 TGCTGTCATGCATGATCGAA 57.973 45.000 30.89 17.18 39.30 3.71
3136 3347 2.946990 TGCTGTCATGCATGATCGAATT 59.053 40.909 30.89 0.00 39.30 2.17
3137 3348 4.128643 TGCTGTCATGCATGATCGAATTA 58.871 39.130 30.89 12.13 39.30 1.40
3231 3442 2.182842 GCCCATCATCACCGACTGC 61.183 63.158 0.00 0.00 0.00 4.40
3255 3466 2.941453 TCGCTTTCGCATCTAGTCTT 57.059 45.000 0.00 0.00 35.30 3.01
3272 3483 7.661968 TCTAGTCTTGTATCATGCAGGAATAC 58.338 38.462 4.62 9.26 0.00 1.89
3275 3486 5.237344 GTCTTGTATCATGCAGGAATACCAC 59.763 44.000 4.62 0.00 38.94 4.16
3312 3531 0.455633 CGTACGTCCCCTTCGTCTTG 60.456 60.000 7.22 0.00 41.72 3.02
3348 3567 2.103263 GACACGGCTTCCCTGAATCTAT 59.897 50.000 0.00 0.00 0.00 1.98
3421 3640 9.520515 AGTGGTATTTTCACAGAAATACAGATT 57.479 29.630 17.33 3.48 46.73 2.40
3432 3651 9.612620 CACAGAAATACAGATTTGAAAACTACC 57.387 33.333 0.00 0.00 35.33 3.18
3433 3652 9.574516 ACAGAAATACAGATTTGAAAACTACCT 57.425 29.630 0.00 0.00 35.33 3.08
3441 3667 4.911514 TTTGAAAACTACCTTGCACTCC 57.088 40.909 0.00 0.00 0.00 3.85
3443 3669 2.441750 TGAAAACTACCTTGCACTCCCT 59.558 45.455 0.00 0.00 0.00 4.20
3447 3673 1.625818 ACTACCTTGCACTCCCTCTTG 59.374 52.381 0.00 0.00 0.00 3.02
3484 3711 8.997621 AAGATCGTTTAATCACTACTTTAGCA 57.002 30.769 0.00 0.00 0.00 3.49
3485 3712 8.408743 AGATCGTTTAATCACTACTTTAGCAC 57.591 34.615 0.00 0.00 0.00 4.40
3486 3713 8.251721 AGATCGTTTAATCACTACTTTAGCACT 58.748 33.333 0.00 0.00 0.00 4.40
3487 3714 8.773404 ATCGTTTAATCACTACTTTAGCACTT 57.227 30.769 0.00 0.00 0.00 3.16
3488 3715 8.597662 TCGTTTAATCACTACTTTAGCACTTT 57.402 30.769 0.00 0.00 0.00 2.66
3489 3716 9.695526 TCGTTTAATCACTACTTTAGCACTTTA 57.304 29.630 0.00 0.00 0.00 1.85
3490 3717 9.953825 CGTTTAATCACTACTTTAGCACTTTAG 57.046 33.333 0.00 0.00 0.00 1.85
3491 3718 9.756461 GTTTAATCACTACTTTAGCACTTTAGC 57.244 33.333 0.00 0.00 0.00 3.09
3504 3731 9.459640 TTTAGCACTTTAGCTATATACAAGTCG 57.540 33.333 5.04 3.71 45.72 4.18
3505 3732 5.921408 AGCACTTTAGCTATATACAAGTCGC 59.079 40.000 14.88 14.88 44.50 5.19
3506 3733 5.118817 GCACTTTAGCTATATACAAGTCGCC 59.881 44.000 5.04 0.00 0.00 5.54
3507 3734 6.448006 CACTTTAGCTATATACAAGTCGCCT 58.552 40.000 5.04 0.00 0.00 5.52
3508 3735 6.363626 CACTTTAGCTATATACAAGTCGCCTG 59.636 42.308 5.04 0.00 0.00 4.85
3509 3736 6.264744 ACTTTAGCTATATACAAGTCGCCTGA 59.735 38.462 0.00 0.00 0.00 3.86
3510 3737 6.644248 TTAGCTATATACAAGTCGCCTGAA 57.356 37.500 0.00 0.00 0.00 3.02
3511 3738 5.531122 AGCTATATACAAGTCGCCTGAAA 57.469 39.130 0.00 0.00 0.00 2.69
3512 3739 6.102897 AGCTATATACAAGTCGCCTGAAAT 57.897 37.500 0.00 0.00 0.00 2.17
3513 3740 6.525629 AGCTATATACAAGTCGCCTGAAATT 58.474 36.000 0.00 0.00 0.00 1.82
3514 3741 6.992715 AGCTATATACAAGTCGCCTGAAATTT 59.007 34.615 0.00 0.00 0.00 1.82
3515 3742 8.148351 AGCTATATACAAGTCGCCTGAAATTTA 58.852 33.333 0.00 0.00 0.00 1.40
3516 3743 8.770828 GCTATATACAAGTCGCCTGAAATTTAA 58.229 33.333 0.00 0.00 0.00 1.52
3521 3748 7.406799 ACAAGTCGCCTGAAATTTAAATTTG 57.593 32.000 26.69 15.43 38.64 2.32
3522 3749 6.423604 ACAAGTCGCCTGAAATTTAAATTTGG 59.576 34.615 26.69 22.36 38.64 3.28
3523 3750 5.478407 AGTCGCCTGAAATTTAAATTTGGG 58.522 37.500 26.69 25.08 38.64 4.12
3524 3751 5.011635 AGTCGCCTGAAATTTAAATTTGGGT 59.988 36.000 26.69 6.72 38.64 4.51
3525 3752 6.209788 AGTCGCCTGAAATTTAAATTTGGGTA 59.790 34.615 26.69 17.19 38.64 3.69
3526 3753 6.869388 GTCGCCTGAAATTTAAATTTGGGTAA 59.131 34.615 26.69 16.93 38.64 2.85
3527 3754 7.062956 GTCGCCTGAAATTTAAATTTGGGTAAG 59.937 37.037 26.69 20.22 38.64 2.34
3528 3755 6.871492 CGCCTGAAATTTAAATTTGGGTAAGT 59.129 34.615 26.69 4.27 38.64 2.24
3529 3756 7.062956 CGCCTGAAATTTAAATTTGGGTAAGTC 59.937 37.037 26.69 12.78 38.64 3.01
3530 3757 7.875554 GCCTGAAATTTAAATTTGGGTAAGTCA 59.124 33.333 26.69 16.01 38.64 3.41
3531 3758 9.203421 CCTGAAATTTAAATTTGGGTAAGTCAC 57.797 33.333 26.69 11.35 38.64 3.67
3532 3759 9.981114 CTGAAATTTAAATTTGGGTAAGTCACT 57.019 29.630 26.69 2.21 38.64 3.41
3540 3767 7.898014 AATTTGGGTAAGTCACTTTTTCTCT 57.102 32.000 0.00 0.00 0.00 3.10
3541 3768 7.898014 ATTTGGGTAAGTCACTTTTTCTCTT 57.102 32.000 0.00 0.00 0.00 2.85
3542 3769 7.712204 TTTGGGTAAGTCACTTTTTCTCTTT 57.288 32.000 0.00 0.00 0.00 2.52
3543 3770 6.693315 TGGGTAAGTCACTTTTTCTCTTTG 57.307 37.500 0.00 0.00 0.00 2.77
3544 3771 6.184789 TGGGTAAGTCACTTTTTCTCTTTGT 58.815 36.000 0.00 0.00 0.00 2.83
3545 3772 7.340256 TGGGTAAGTCACTTTTTCTCTTTGTA 58.660 34.615 0.00 0.00 0.00 2.41
3546 3773 7.996644 TGGGTAAGTCACTTTTTCTCTTTGTAT 59.003 33.333 0.00 0.00 0.00 2.29
3547 3774 8.504815 GGGTAAGTCACTTTTTCTCTTTGTATC 58.495 37.037 0.00 0.00 0.00 2.24
3548 3775 9.274206 GGTAAGTCACTTTTTCTCTTTGTATCT 57.726 33.333 0.00 0.00 0.00 1.98
3552 3779 9.699703 AGTCACTTTTTCTCTTTGTATCTAGTC 57.300 33.333 0.00 0.00 0.00 2.59
3553 3780 8.640291 GTCACTTTTTCTCTTTGTATCTAGTCG 58.360 37.037 0.00 0.00 0.00 4.18
3554 3781 7.813148 TCACTTTTTCTCTTTGTATCTAGTCGG 59.187 37.037 0.00 0.00 0.00 4.79
3555 3782 7.599245 CACTTTTTCTCTTTGTATCTAGTCGGT 59.401 37.037 0.00 0.00 0.00 4.69
3556 3783 7.813627 ACTTTTTCTCTTTGTATCTAGTCGGTC 59.186 37.037 0.00 0.00 0.00 4.79
3557 3784 5.831702 TTCTCTTTGTATCTAGTCGGTCC 57.168 43.478 0.00 0.00 0.00 4.46
3558 3785 5.113446 TCTCTTTGTATCTAGTCGGTCCT 57.887 43.478 0.00 0.00 0.00 3.85
3559 3786 5.507637 TCTCTTTGTATCTAGTCGGTCCTT 58.492 41.667 0.00 0.00 0.00 3.36
3560 3787 5.950549 TCTCTTTGTATCTAGTCGGTCCTTT 59.049 40.000 0.00 0.00 0.00 3.11
3561 3788 6.095160 TCTCTTTGTATCTAGTCGGTCCTTTC 59.905 42.308 0.00 0.00 0.00 2.62
3562 3789 5.713389 TCTTTGTATCTAGTCGGTCCTTTCA 59.287 40.000 0.00 0.00 0.00 2.69
3563 3790 4.978083 TGTATCTAGTCGGTCCTTTCAC 57.022 45.455 0.00 0.00 0.00 3.18
3564 3791 3.698040 TGTATCTAGTCGGTCCTTTCACC 59.302 47.826 0.00 0.00 0.00 4.02
3565 3792 2.599408 TCTAGTCGGTCCTTTCACCT 57.401 50.000 0.00 0.00 33.77 4.00
3566 3793 2.885616 TCTAGTCGGTCCTTTCACCTT 58.114 47.619 0.00 0.00 33.77 3.50
3567 3794 3.236896 TCTAGTCGGTCCTTTCACCTTT 58.763 45.455 0.00 0.00 33.77 3.11
3568 3795 2.256117 AGTCGGTCCTTTCACCTTTG 57.744 50.000 0.00 0.00 33.77 2.77
3569 3796 1.202770 AGTCGGTCCTTTCACCTTTGG 60.203 52.381 0.00 0.00 33.77 3.28
3570 3797 0.841289 TCGGTCCTTTCACCTTTGGT 59.159 50.000 0.00 0.00 35.62 3.67
3571 3798 2.048601 TCGGTCCTTTCACCTTTGGTA 58.951 47.619 0.00 0.00 32.11 3.25
3572 3799 2.640826 TCGGTCCTTTCACCTTTGGTAT 59.359 45.455 0.00 0.00 32.11 2.73
3573 3800 3.073356 TCGGTCCTTTCACCTTTGGTATT 59.927 43.478 0.00 0.00 32.11 1.89
3574 3801 3.824443 CGGTCCTTTCACCTTTGGTATTT 59.176 43.478 0.00 0.00 32.11 1.40
3575 3802 4.320935 CGGTCCTTTCACCTTTGGTATTTG 60.321 45.833 0.00 0.00 32.11 2.32
3576 3803 4.587262 GGTCCTTTCACCTTTGGTATTTGT 59.413 41.667 0.00 0.00 32.11 2.83
3577 3804 5.069914 GGTCCTTTCACCTTTGGTATTTGTT 59.930 40.000 0.00 0.00 32.11 2.83
3578 3805 6.265876 GGTCCTTTCACCTTTGGTATTTGTTA 59.734 38.462 0.00 0.00 32.11 2.41
3579 3806 7.368059 GTCCTTTCACCTTTGGTATTTGTTAG 58.632 38.462 0.00 0.00 32.11 2.34
3580 3807 7.013942 GTCCTTTCACCTTTGGTATTTGTTAGT 59.986 37.037 0.00 0.00 32.11 2.24
3581 3808 7.229907 TCCTTTCACCTTTGGTATTTGTTAGTC 59.770 37.037 0.00 0.00 32.11 2.59
3582 3809 6.548441 TTCACCTTTGGTATTTGTTAGTCG 57.452 37.500 0.00 0.00 32.11 4.18
3583 3810 5.856156 TCACCTTTGGTATTTGTTAGTCGA 58.144 37.500 0.00 0.00 32.11 4.20
3584 3811 5.697633 TCACCTTTGGTATTTGTTAGTCGAC 59.302 40.000 7.70 7.70 32.11 4.20
3585 3812 5.699458 CACCTTTGGTATTTGTTAGTCGACT 59.301 40.000 23.66 23.66 32.11 4.18
3586 3813 5.699458 ACCTTTGGTATTTGTTAGTCGACTG 59.301 40.000 28.12 7.54 32.11 3.51
3587 3814 5.929992 CCTTTGGTATTTGTTAGTCGACTGA 59.070 40.000 28.12 17.78 0.00 3.41
3588 3815 6.128634 CCTTTGGTATTTGTTAGTCGACTGAC 60.129 42.308 28.23 28.23 45.86 3.51
3604 3831 7.858583 GTCGACTGACTAAAATTTAGGTTTGT 58.141 34.615 16.15 9.34 42.08 2.83
3605 3832 8.340443 GTCGACTGACTAAAATTTAGGTTTGTT 58.660 33.333 16.15 0.00 42.08 2.83
3606 3833 9.545105 TCGACTGACTAAAATTTAGGTTTGTTA 57.455 29.630 16.15 0.00 0.00 2.41
3623 3850 9.996554 AGGTTTGTTAATTCTTTTTGGGATAAG 57.003 29.630 0.00 0.00 0.00 1.73
3624 3851 9.772973 GGTTTGTTAATTCTTTTTGGGATAAGT 57.227 29.630 0.00 0.00 0.00 2.24
3638 3865 9.689501 TTTTGGGATAAGTATATTTTTCGTCCT 57.310 29.630 0.00 0.00 0.00 3.85
3639 3866 8.897872 TTGGGATAAGTATATTTTTCGTCCTC 57.102 34.615 0.00 0.00 0.00 3.71
3640 3867 7.149973 TGGGATAAGTATATTTTTCGTCCTCG 58.850 38.462 0.00 0.00 38.55 4.63
3641 3868 7.014518 TGGGATAAGTATATTTTTCGTCCTCGA 59.985 37.037 0.00 0.00 44.66 4.04
3650 3877 2.168947 TCGTCCTCGAACTCTTCCG 58.831 57.895 0.00 0.00 43.34 4.30
3651 3878 0.321034 TCGTCCTCGAACTCTTCCGA 60.321 55.000 0.00 0.00 43.34 4.55
3665 3892 4.654015 CTCTTCCGAGAGTTTAGAAGTCG 58.346 47.826 0.00 0.00 43.66 4.18
3666 3893 4.070716 TCTTCCGAGAGTTTAGAAGTCGT 58.929 43.478 0.00 0.00 37.56 4.34
3667 3894 4.153835 TCTTCCGAGAGTTTAGAAGTCGTC 59.846 45.833 0.00 0.00 37.56 4.20
3668 3895 3.672808 TCCGAGAGTTTAGAAGTCGTCT 58.327 45.455 0.00 0.00 40.71 4.18
3669 3896 3.683822 TCCGAGAGTTTAGAAGTCGTCTC 59.316 47.826 0.00 0.00 37.84 3.36
3670 3897 3.685756 CCGAGAGTTTAGAAGTCGTCTCT 59.314 47.826 0.00 0.00 37.84 3.10
3671 3898 4.201744 CCGAGAGTTTAGAAGTCGTCTCTC 60.202 50.000 9.16 9.16 42.22 3.20
3672 3899 4.389382 CGAGAGTTTAGAAGTCGTCTCTCA 59.611 45.833 16.47 0.00 44.35 3.27
3673 3900 5.107026 CGAGAGTTTAGAAGTCGTCTCTCAA 60.107 44.000 16.47 0.00 44.35 3.02
3674 3901 6.004408 AGAGTTTAGAAGTCGTCTCTCAAC 57.996 41.667 0.00 0.00 37.84 3.18
3675 3902 5.766174 AGAGTTTAGAAGTCGTCTCTCAACT 59.234 40.000 9.12 9.12 37.84 3.16
3676 3903 6.935771 AGAGTTTAGAAGTCGTCTCTCAACTA 59.064 38.462 9.25 0.00 37.84 2.24
3677 3904 6.901265 AGTTTAGAAGTCGTCTCTCAACTAC 58.099 40.000 8.15 0.00 37.84 2.73
3678 3905 6.485984 AGTTTAGAAGTCGTCTCTCAACTACA 59.514 38.462 8.15 0.00 37.84 2.74
3679 3906 6.872628 TTAGAAGTCGTCTCTCAACTACAA 57.127 37.500 0.00 0.00 37.84 2.41
3680 3907 5.769484 AGAAGTCGTCTCTCAACTACAAA 57.231 39.130 0.00 0.00 0.00 2.83
3681 3908 6.145338 AGAAGTCGTCTCTCAACTACAAAA 57.855 37.500 0.00 0.00 0.00 2.44
3682 3909 5.978322 AGAAGTCGTCTCTCAACTACAAAAC 59.022 40.000 0.00 0.00 0.00 2.43
3683 3910 5.258456 AGTCGTCTCTCAACTACAAAACA 57.742 39.130 0.00 0.00 0.00 2.83
3684 3911 5.282510 AGTCGTCTCTCAACTACAAAACAG 58.717 41.667 0.00 0.00 0.00 3.16
3685 3912 5.067413 AGTCGTCTCTCAACTACAAAACAGA 59.933 40.000 0.00 0.00 0.00 3.41
3686 3913 5.921408 GTCGTCTCTCAACTACAAAACAGAT 59.079 40.000 0.00 0.00 0.00 2.90
3687 3914 7.040617 AGTCGTCTCTCAACTACAAAACAGATA 60.041 37.037 0.00 0.00 0.00 1.98
3688 3915 7.271653 GTCGTCTCTCAACTACAAAACAGATAG 59.728 40.741 0.00 0.00 0.00 2.08
3689 3916 7.040617 TCGTCTCTCAACTACAAAACAGATAGT 60.041 37.037 0.00 0.00 0.00 2.12
3690 3917 7.595502 CGTCTCTCAACTACAAAACAGATAGTT 59.404 37.037 0.00 0.00 43.89 2.24
3701 3928 4.884668 AACAGATAGTTTTCGTCCCTCA 57.115 40.909 0.00 0.00 37.03 3.86
3702 3929 4.884668 ACAGATAGTTTTCGTCCCTCAA 57.115 40.909 0.00 0.00 0.00 3.02
3703 3930 4.566987 ACAGATAGTTTTCGTCCCTCAAC 58.433 43.478 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 8.421784 AGAATATGTCGAGGCAAAGAAATAGTA 58.578 33.333 0.00 0.00 0.00 1.82
63 64 7.275920 AGAATATGTCGAGGCAAAGAAATAGT 58.724 34.615 0.00 0.00 0.00 2.12
64 65 7.358765 CGAGAATATGTCGAGGCAAAGAAATAG 60.359 40.741 2.24 0.00 39.92 1.73
65 66 6.420903 CGAGAATATGTCGAGGCAAAGAAATA 59.579 38.462 2.24 0.00 39.92 1.40
119 120 2.264794 GGTGGTGGCACCGAGTAG 59.735 66.667 30.14 0.00 42.58 2.57
130 131 0.883833 GGTCAAGCTCATTGGTGGTG 59.116 55.000 0.00 0.00 39.54 4.17
131 132 0.478072 TGGTCAAGCTCATTGGTGGT 59.522 50.000 0.00 0.00 39.54 4.16
133 134 0.883833 GGTGGTCAAGCTCATTGGTG 59.116 55.000 0.00 0.00 39.54 4.17
134 135 0.478072 TGGTGGTCAAGCTCATTGGT 59.522 50.000 0.00 0.00 39.54 3.67
176 192 2.639065 GTTGGCCATTACGATGAAGGA 58.361 47.619 6.09 0.00 35.16 3.36
177 193 1.330521 CGTTGGCCATTACGATGAAGG 59.669 52.381 22.70 0.00 40.03 3.46
178 194 1.268032 GCGTTGGCCATTACGATGAAG 60.268 52.381 29.43 6.28 40.03 3.02
179 195 0.730265 GCGTTGGCCATTACGATGAA 59.270 50.000 29.43 0.00 40.03 2.57
180 196 2.389386 GCGTTGGCCATTACGATGA 58.611 52.632 29.43 0.00 40.03 2.92
203 219 2.046023 TGACAATGGCGAGCAGGG 60.046 61.111 0.00 0.00 0.00 4.45
205 221 2.789917 GCTGACAATGGCGAGCAG 59.210 61.111 5.81 0.00 0.00 4.24
217 233 2.350772 CCAAAAATGTCCACTCGCTGAC 60.351 50.000 0.00 0.00 0.00 3.51
218 234 1.879380 CCAAAAATGTCCACTCGCTGA 59.121 47.619 0.00 0.00 0.00 4.26
223 239 3.643159 GGTGACCAAAAATGTCCACTC 57.357 47.619 0.00 0.00 31.60 3.51
246 262 6.427547 TGGAATCTTGCTTTTATTTGCTTTGG 59.572 34.615 0.00 0.00 0.00 3.28
253 269 9.435688 GTGGTTATTGGAATCTTGCTTTTATTT 57.564 29.630 0.00 0.00 0.00 1.40
254 270 8.592809 TGTGGTTATTGGAATCTTGCTTTTATT 58.407 29.630 0.00 0.00 0.00 1.40
261 277 7.277760 GGTAAAATGTGGTTATTGGAATCTTGC 59.722 37.037 0.00 0.00 0.00 4.01
270 286 8.760569 GTTCAAAGTGGTAAAATGTGGTTATTG 58.239 33.333 0.00 0.00 0.00 1.90
272 288 8.012957 TGTTCAAAGTGGTAAAATGTGGTTAT 57.987 30.769 0.00 0.00 0.00 1.89
274 290 6.287589 TGTTCAAAGTGGTAAAATGTGGTT 57.712 33.333 0.00 0.00 0.00 3.67
282 298 5.835819 TGGATTGGATGTTCAAAGTGGTAAA 59.164 36.000 0.00 0.00 0.00 2.01
309 325 2.237143 CTGAGGGTCTGTATTTGCCTCA 59.763 50.000 0.00 0.00 0.00 3.86
310 326 2.420687 CCTGAGGGTCTGTATTTGCCTC 60.421 54.545 0.00 0.00 0.00 4.70
311 327 1.561542 CCTGAGGGTCTGTATTTGCCT 59.438 52.381 0.00 0.00 0.00 4.75
320 336 4.087892 CGGTGGCCTGAGGGTCTG 62.088 72.222 3.32 0.00 38.23 3.51
419 436 6.329583 CATGGGCATGTGTATGATGGATCAT 61.330 44.000 7.28 7.28 40.75 2.45
432 449 5.456548 TTTATTATCAGCATGGGCATGTG 57.543 39.130 0.00 0.00 44.61 3.21
434 451 5.416083 CCATTTATTATCAGCATGGGCATG 58.584 41.667 0.00 0.00 44.61 4.06
467 484 4.018779 TGAGGGTAATGTAAGGTTCCCTTG 60.019 45.833 5.78 0.00 44.44 3.61
472 489 9.003658 CAATGATATGAGGGTAATGTAAGGTTC 57.996 37.037 0.00 0.00 0.00 3.62
474 491 6.942576 GCAATGATATGAGGGTAATGTAAGGT 59.057 38.462 0.00 0.00 0.00 3.50
477 494 6.430925 GCTGCAATGATATGAGGGTAATGTAA 59.569 38.462 0.00 0.00 0.00 2.41
509 526 0.377554 GCGCGTACTAGAAGAGCTCA 59.622 55.000 17.77 0.00 29.96 4.26
514 531 3.176708 GTTTCATGCGCGTACTAGAAGA 58.823 45.455 8.43 0.00 0.00 2.87
515 532 2.281762 GGTTTCATGCGCGTACTAGAAG 59.718 50.000 8.43 0.00 0.00 2.85
516 533 2.264813 GGTTTCATGCGCGTACTAGAA 58.735 47.619 8.43 6.21 0.00 2.10
517 534 1.470285 GGGTTTCATGCGCGTACTAGA 60.470 52.381 8.43 0.00 0.00 2.43
518 535 0.928229 GGGTTTCATGCGCGTACTAG 59.072 55.000 8.43 0.00 0.00 2.57
519 536 0.246910 TGGGTTTCATGCGCGTACTA 59.753 50.000 8.43 0.00 0.00 1.82
520 537 0.604243 TTGGGTTTCATGCGCGTACT 60.604 50.000 8.43 0.00 0.00 2.73
521 538 0.450184 ATTGGGTTTCATGCGCGTAC 59.550 50.000 8.43 0.00 0.00 3.67
522 539 1.131504 GAATTGGGTTTCATGCGCGTA 59.868 47.619 8.43 2.40 0.00 4.42
523 540 0.109319 GAATTGGGTTTCATGCGCGT 60.109 50.000 8.43 0.00 0.00 6.01
524 541 0.801836 GGAATTGGGTTTCATGCGCG 60.802 55.000 0.00 0.00 0.00 6.86
525 542 0.460109 GGGAATTGGGTTTCATGCGC 60.460 55.000 0.00 0.00 0.00 6.09
526 543 0.894141 TGGGAATTGGGTTTCATGCG 59.106 50.000 0.00 0.00 0.00 4.73
527 544 3.632643 AATGGGAATTGGGTTTCATGC 57.367 42.857 0.00 0.00 0.00 4.06
528 545 4.469227 TGGTAATGGGAATTGGGTTTCATG 59.531 41.667 0.00 0.00 0.00 3.07
529 546 4.693420 TGGTAATGGGAATTGGGTTTCAT 58.307 39.130 0.00 0.00 0.00 2.57
530 547 4.093011 CTGGTAATGGGAATTGGGTTTCA 58.907 43.478 0.00 0.00 0.00 2.69
531 548 3.118775 GCTGGTAATGGGAATTGGGTTTC 60.119 47.826 0.00 0.00 0.00 2.78
538 555 4.042187 CCTAGCTAGCTGGTAATGGGAATT 59.958 45.833 27.68 0.00 0.00 2.17
550 567 1.139853 CCCAAGAACCCTAGCTAGCTG 59.860 57.143 27.68 16.13 0.00 4.24
553 570 5.888982 TTTATCCCAAGAACCCTAGCTAG 57.111 43.478 14.20 14.20 0.00 3.42
556 573 5.112129 TCTTTTATCCCAAGAACCCTAGC 57.888 43.478 0.00 0.00 0.00 3.42
577 594 3.816994 AGCAAGGGATACGGGTTTTATC 58.183 45.455 0.00 0.00 37.60 1.75
578 595 3.945640 AGCAAGGGATACGGGTTTTAT 57.054 42.857 0.00 0.00 37.60 1.40
579 596 3.776417 AGTAGCAAGGGATACGGGTTTTA 59.224 43.478 0.00 0.00 40.75 1.52
580 597 2.574824 AGTAGCAAGGGATACGGGTTTT 59.425 45.455 0.00 0.00 40.75 2.43
581 598 2.093128 CAGTAGCAAGGGATACGGGTTT 60.093 50.000 0.00 0.00 40.75 3.27
582 599 1.485066 CAGTAGCAAGGGATACGGGTT 59.515 52.381 0.00 0.00 40.75 4.11
583 600 1.120530 CAGTAGCAAGGGATACGGGT 58.879 55.000 0.00 0.00 40.75 5.28
584 601 1.120530 ACAGTAGCAAGGGATACGGG 58.879 55.000 0.00 0.00 40.75 5.28
585 602 2.483188 GGAACAGTAGCAAGGGATACGG 60.483 54.545 0.00 0.00 40.75 4.02
586 603 2.483188 GGGAACAGTAGCAAGGGATACG 60.483 54.545 0.00 0.00 40.75 3.06
587 604 2.772515 AGGGAACAGTAGCAAGGGATAC 59.227 50.000 0.00 0.00 36.15 2.24
588 605 3.130734 AGGGAACAGTAGCAAGGGATA 57.869 47.619 0.00 0.00 0.00 2.59
589 606 1.972588 AGGGAACAGTAGCAAGGGAT 58.027 50.000 0.00 0.00 0.00 3.85
590 607 2.467880 CTAGGGAACAGTAGCAAGGGA 58.532 52.381 0.00 0.00 0.00 4.20
604 621 0.837272 GTGGCCAGTTATGCTAGGGA 59.163 55.000 5.11 0.00 0.00 4.20
605 622 0.839946 AGTGGCCAGTTATGCTAGGG 59.160 55.000 5.11 0.00 0.00 3.53
606 623 1.765314 AGAGTGGCCAGTTATGCTAGG 59.235 52.381 15.96 0.00 0.00 3.02
607 624 2.831333 CAGAGTGGCCAGTTATGCTAG 58.169 52.381 15.96 0.00 0.00 3.42
608 625 1.134401 GCAGAGTGGCCAGTTATGCTA 60.134 52.381 30.36 0.00 0.00 3.49
609 626 0.393537 GCAGAGTGGCCAGTTATGCT 60.394 55.000 30.36 16.29 0.00 3.79
610 627 2.101700 GCAGAGTGGCCAGTTATGC 58.898 57.895 26.62 26.62 0.00 3.14
619 636 1.244019 AATTCGGTTGGCAGAGTGGC 61.244 55.000 0.00 0.00 44.03 5.01
620 637 1.737793 GTAATTCGGTTGGCAGAGTGG 59.262 52.381 0.00 0.00 0.00 4.00
621 638 2.159627 GTGTAATTCGGTTGGCAGAGTG 59.840 50.000 0.00 0.00 0.00 3.51
622 639 2.038557 AGTGTAATTCGGTTGGCAGAGT 59.961 45.455 0.00 0.00 0.00 3.24
623 640 2.416547 CAGTGTAATTCGGTTGGCAGAG 59.583 50.000 0.00 0.00 0.00 3.35
624 641 2.224426 ACAGTGTAATTCGGTTGGCAGA 60.224 45.455 0.00 0.00 0.00 4.26
625 642 2.095768 CACAGTGTAATTCGGTTGGCAG 60.096 50.000 0.00 0.00 0.00 4.85
626 643 1.876799 CACAGTGTAATTCGGTTGGCA 59.123 47.619 0.00 0.00 0.00 4.92
627 644 1.401018 GCACAGTGTAATTCGGTTGGC 60.401 52.381 1.61 0.00 0.00 4.52
628 645 1.876799 TGCACAGTGTAATTCGGTTGG 59.123 47.619 1.61 0.00 0.00 3.77
666 683 8.925338 ACTTATATTTCGAAACAGAGGGAGTAT 58.075 33.333 13.81 6.43 0.00 2.12
669 686 7.493367 AGACTTATATTTCGAAACAGAGGGAG 58.507 38.462 13.81 7.63 0.00 4.30
670 687 7.419711 AGACTTATATTTCGAAACAGAGGGA 57.580 36.000 13.81 0.00 0.00 4.20
671 688 8.494016 AAAGACTTATATTTCGAAACAGAGGG 57.506 34.615 13.81 5.06 0.00 4.30
690 707 9.579932 AGTCCATTTGAAATCTCTAAAAAGACT 57.420 29.630 0.00 0.00 0.00 3.24
694 711 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
695 712 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
696 713 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
697 714 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
698 715 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
699 716 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
700 717 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
701 718 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
702 719 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
703 720 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
704 721 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
705 722 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
706 723 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
707 724 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
708 725 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
709 726 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
710 727 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
711 728 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
712 729 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
713 730 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
714 731 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
715 732 8.396390 GTGTCTATATACATCCGTATGTGGTAG 58.604 40.741 3.56 3.93 45.99 3.18
716 733 7.884354 TGTGTCTATATACATCCGTATGTGGTA 59.116 37.037 3.56 0.00 45.99 3.25
717 734 6.717997 TGTGTCTATATACATCCGTATGTGGT 59.282 38.462 3.56 0.00 45.99 4.16
718 735 7.153217 TGTGTCTATATACATCCGTATGTGG 57.847 40.000 3.56 0.00 45.99 4.17
719 736 9.639601 AAATGTGTCTATATACATCCGTATGTG 57.360 33.333 3.56 0.00 45.99 3.21
747 764 8.897752 GGAGCAAAATGAATAAATCTACACTCT 58.102 33.333 0.00 0.00 0.00 3.24
748 765 7.852945 CGGAGCAAAATGAATAAATCTACACTC 59.147 37.037 0.00 0.00 0.00 3.51
749 766 7.336931 ACGGAGCAAAATGAATAAATCTACACT 59.663 33.333 0.00 0.00 0.00 3.55
750 767 7.472543 ACGGAGCAAAATGAATAAATCTACAC 58.527 34.615 0.00 0.00 0.00 2.90
751 768 7.624360 ACGGAGCAAAATGAATAAATCTACA 57.376 32.000 0.00 0.00 0.00 2.74
752 769 9.599322 CATACGGAGCAAAATGAATAAATCTAC 57.401 33.333 0.00 0.00 0.00 2.59
753 770 9.337396 ACATACGGAGCAAAATGAATAAATCTA 57.663 29.630 0.00 0.00 0.00 1.98
754 771 8.225603 ACATACGGAGCAAAATGAATAAATCT 57.774 30.769 0.00 0.00 0.00 2.40
755 772 9.599322 CTACATACGGAGCAAAATGAATAAATC 57.401 33.333 0.00 0.00 0.00 2.17
756 773 9.120538 ACTACATACGGAGCAAAATGAATAAAT 57.879 29.630 0.00 0.00 0.00 1.40
757 774 8.500753 ACTACATACGGAGCAAAATGAATAAA 57.499 30.769 0.00 0.00 0.00 1.40
758 775 7.766738 TGACTACATACGGAGCAAAATGAATAA 59.233 33.333 0.00 0.00 0.00 1.40
759 776 7.223971 GTGACTACATACGGAGCAAAATGAATA 59.776 37.037 0.00 0.00 0.00 1.75
760 777 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
761 778 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
762 779 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
763 780 4.034048 GGTGACTACATACGGAGCAAAATG 59.966 45.833 0.00 0.00 0.00 2.32
764 781 4.081087 AGGTGACTACATACGGAGCAAAAT 60.081 41.667 0.00 0.00 40.61 1.82
765 782 3.259876 AGGTGACTACATACGGAGCAAAA 59.740 43.478 0.00 0.00 40.61 2.44
766 783 2.829720 AGGTGACTACATACGGAGCAAA 59.170 45.455 0.00 0.00 40.61 3.68
767 784 2.453521 AGGTGACTACATACGGAGCAA 58.546 47.619 0.00 0.00 40.61 3.91
768 785 2.139323 AGGTGACTACATACGGAGCA 57.861 50.000 0.00 0.00 40.61 4.26
781 798 9.308318 GTCTTTCTAGAGATTTCAATAGGTGAC 57.692 37.037 0.00 0.00 35.39 3.67
782 799 8.478877 GGTCTTTCTAGAGATTTCAATAGGTGA 58.521 37.037 0.00 0.00 0.00 4.02
783 800 8.482128 AGGTCTTTCTAGAGATTTCAATAGGTG 58.518 37.037 0.00 0.00 0.00 4.00
784 801 8.616799 AGGTCTTTCTAGAGATTTCAATAGGT 57.383 34.615 0.00 0.00 0.00 3.08
808 825 8.943594 AGTACTCCCTCTGTTCCTAAATATAG 57.056 38.462 0.00 0.00 0.00 1.31
810 827 9.725206 TTAAGTACTCCCTCTGTTCCTAAATAT 57.275 33.333 0.00 0.00 0.00 1.28
811 828 9.725206 ATTAAGTACTCCCTCTGTTCCTAAATA 57.275 33.333 0.00 0.00 0.00 1.40
812 829 8.487028 CATTAAGTACTCCCTCTGTTCCTAAAT 58.513 37.037 0.00 0.00 0.00 1.40
813 830 7.093024 CCATTAAGTACTCCCTCTGTTCCTAAA 60.093 40.741 0.00 0.00 0.00 1.85
814 831 6.383147 CCATTAAGTACTCCCTCTGTTCCTAA 59.617 42.308 0.00 0.00 0.00 2.69
815 832 5.897824 CCATTAAGTACTCCCTCTGTTCCTA 59.102 44.000 0.00 0.00 0.00 2.94
816 833 4.717280 CCATTAAGTACTCCCTCTGTTCCT 59.283 45.833 0.00 0.00 0.00 3.36
817 834 4.683671 GCCATTAAGTACTCCCTCTGTTCC 60.684 50.000 0.00 0.00 0.00 3.62
818 835 4.162509 AGCCATTAAGTACTCCCTCTGTTC 59.837 45.833 0.00 0.00 0.00 3.18
819 836 4.080863 CAGCCATTAAGTACTCCCTCTGTT 60.081 45.833 0.00 0.00 0.00 3.16
820 837 3.452627 CAGCCATTAAGTACTCCCTCTGT 59.547 47.826 0.00 0.00 0.00 3.41
821 838 3.452627 ACAGCCATTAAGTACTCCCTCTG 59.547 47.826 0.00 2.39 0.00 3.35
822 839 3.707102 GACAGCCATTAAGTACTCCCTCT 59.293 47.826 0.00 0.00 0.00 3.69
823 840 3.707102 AGACAGCCATTAAGTACTCCCTC 59.293 47.826 0.00 0.00 0.00 4.30
824 841 3.725634 AGACAGCCATTAAGTACTCCCT 58.274 45.455 0.00 0.00 0.00 4.20
825 842 4.081087 TGAAGACAGCCATTAAGTACTCCC 60.081 45.833 0.00 0.00 0.00 4.30
826 843 5.086104 TGAAGACAGCCATTAAGTACTCC 57.914 43.478 0.00 0.00 0.00 3.85
827 844 6.166982 AGTTGAAGACAGCCATTAAGTACTC 58.833 40.000 0.00 0.00 0.00 2.59
828 845 6.115448 AGTTGAAGACAGCCATTAAGTACT 57.885 37.500 0.00 0.00 0.00 2.73
829 846 7.900782 TTAGTTGAAGACAGCCATTAAGTAC 57.099 36.000 0.00 0.00 0.00 2.73
830 847 9.162764 GAATTAGTTGAAGACAGCCATTAAGTA 57.837 33.333 0.00 0.00 0.00 2.24
831 848 7.121315 GGAATTAGTTGAAGACAGCCATTAAGT 59.879 37.037 0.00 0.00 0.00 2.24
832 849 7.415653 GGGAATTAGTTGAAGACAGCCATTAAG 60.416 40.741 0.00 0.00 0.00 1.85
847 864 4.524328 ACCAAGAGCAAAGGGAATTAGTTG 59.476 41.667 0.00 0.00 0.00 3.16
876 893 0.821517 ACGCCATGACACGAGGAATA 59.178 50.000 9.28 0.00 0.00 1.75
879 896 2.571757 GACGCCATGACACGAGGA 59.428 61.111 9.28 0.00 0.00 3.71
898 917 7.588497 AGCTATCAGTCGGAATGCATATATA 57.412 36.000 0.00 0.00 32.45 0.86
899 918 6.477053 AGCTATCAGTCGGAATGCATATAT 57.523 37.500 0.00 0.00 32.45 0.86
900 919 5.921962 AGCTATCAGTCGGAATGCATATA 57.078 39.130 0.00 0.00 32.45 0.86
901 920 4.815533 AGCTATCAGTCGGAATGCATAT 57.184 40.909 0.00 0.00 32.45 1.78
914 933 4.989797 CCATTCTCAACAGCTAGCTATCAG 59.010 45.833 18.86 11.00 0.00 2.90
975 994 1.057361 GCTTATATACGCGCGCTGC 59.943 57.895 32.58 18.70 41.47 5.25
976 995 0.091344 GTGCTTATATACGCGCGCTG 59.909 55.000 32.58 23.88 0.00 5.18
977 996 1.007336 GGTGCTTATATACGCGCGCT 61.007 55.000 32.58 20.49 37.52 5.92
978 997 1.279527 TGGTGCTTATATACGCGCGC 61.280 55.000 32.58 23.91 37.52 6.86
979 998 0.433492 GTGGTGCTTATATACGCGCG 59.567 55.000 30.96 30.96 37.52 6.86
980 999 0.788391 GGTGGTGCTTATATACGCGC 59.212 55.000 14.59 14.59 36.00 6.86
981 1000 2.143008 TGGTGGTGCTTATATACGCG 57.857 50.000 3.53 3.53 0.00 6.01
982 1001 2.159627 GCATGGTGGTGCTTATATACGC 59.840 50.000 4.31 4.31 41.82 4.42
983 1002 3.398406 TGCATGGTGGTGCTTATATACG 58.602 45.455 0.00 0.00 45.27 3.06
984 1003 5.248640 AGATGCATGGTGGTGCTTATATAC 58.751 41.667 2.46 0.00 45.27 1.47
1013 1032 2.279136 GCAGTAAATCGTACGTGCTGAG 59.721 50.000 21.01 7.87 0.00 3.35
1116 1135 2.504274 GCCCATGCCCATGTCCATG 61.504 63.158 13.18 13.18 38.78 3.66
1117 1136 2.123164 GCCCATGCCCATGTCCAT 60.123 61.111 7.42 0.00 37.11 3.41
1118 1137 3.011500 ATGCCCATGCCCATGTCCA 62.011 57.895 7.42 4.52 37.11 4.02
1119 1138 2.123164 ATGCCCATGCCCATGTCC 60.123 61.111 7.42 0.00 37.11 4.02
1120 1139 2.504274 CCATGCCCATGCCCATGTC 61.504 63.158 17.29 0.41 37.67 3.06
1121 1140 2.445085 CCATGCCCATGCCCATGT 60.445 61.111 17.29 0.00 37.67 3.21
1122 1141 3.238497 CCCATGCCCATGCCCATG 61.238 66.667 13.76 13.76 38.78 3.66
1126 1145 3.936203 CATGCCCATGCCCATGCC 61.936 66.667 9.83 0.00 37.49 4.40
1127 1146 3.936203 CCATGCCCATGCCCATGC 61.936 66.667 14.78 1.70 37.96 4.06
1146 1165 1.230635 GCTGCAAGACGAAGAGCCAA 61.231 55.000 0.00 0.00 34.07 4.52
1147 1166 1.669115 GCTGCAAGACGAAGAGCCA 60.669 57.895 0.00 0.00 34.07 4.75
1181 1200 1.000771 AGTAGCACGAGGAGGCAGA 60.001 57.895 0.00 0.00 0.00 4.26
1279 1298 2.280186 GACGATGGCCGGGATGAC 60.280 66.667 2.18 0.00 43.93 3.06
1282 1301 3.234730 GGAGACGATGGCCGGGAT 61.235 66.667 2.18 0.00 43.93 3.85
1950 1984 4.681978 GACTTGTCCGCGCCCTGT 62.682 66.667 0.00 0.00 0.00 4.00
2704 2763 3.241868 GCAACGGTACAAGTACGCATAAG 60.242 47.826 4.45 0.00 36.94 1.73
2705 2764 2.667481 GCAACGGTACAAGTACGCATAA 59.333 45.455 4.45 0.00 36.94 1.90
2788 2850 2.892374 CACACACACAGACAAGAGACA 58.108 47.619 0.00 0.00 0.00 3.41
2789 2851 1.594862 GCACACACACAGACAAGAGAC 59.405 52.381 0.00 0.00 0.00 3.36
2790 2852 1.206849 TGCACACACACAGACAAGAGA 59.793 47.619 0.00 0.00 0.00 3.10
2791 2853 1.596260 CTGCACACACACAGACAAGAG 59.404 52.381 0.00 0.00 35.90 2.85
2792 2854 1.655484 CTGCACACACACAGACAAGA 58.345 50.000 0.00 0.00 35.90 3.02
2793 2855 0.659427 CCTGCACACACACAGACAAG 59.341 55.000 0.00 0.00 35.90 3.16
2794 2856 0.035534 ACCTGCACACACACAGACAA 60.036 50.000 0.00 0.00 35.90 3.18
2795 2857 0.744057 CACCTGCACACACACAGACA 60.744 55.000 0.00 0.00 35.90 3.41
2796 2858 0.744414 ACACCTGCACACACACAGAC 60.744 55.000 0.00 0.00 35.90 3.51
2797 2859 0.461870 GACACCTGCACACACACAGA 60.462 55.000 0.00 0.00 35.90 3.41
2798 2860 1.439353 GGACACCTGCACACACACAG 61.439 60.000 0.00 0.00 0.00 3.66
2802 2864 0.105964 TACTGGACACCTGCACACAC 59.894 55.000 0.00 0.00 0.00 3.82
2828 2890 4.585879 ACCCACCATGATTTACAGTGTAC 58.414 43.478 1.43 0.00 0.00 2.90
2893 3104 8.950210 ACAAATATGTCTTCGAATCAATCAACT 58.050 29.630 0.00 0.00 33.41 3.16
2934 3145 2.029666 CCTGCCCGATCGATCCAC 59.970 66.667 18.66 9.58 0.00 4.02
2949 3160 1.152819 CACTATGCATGCCAGCCCT 60.153 57.895 16.68 0.00 0.00 5.19
2985 3196 8.854614 ATACAGTCTTGTTAGCTGAGATTTTT 57.145 30.769 0.00 0.00 38.76 1.94
2986 3197 9.944376 TTATACAGTCTTGTTAGCTGAGATTTT 57.056 29.630 0.00 0.00 38.76 1.82
2987 3198 9.593134 CTTATACAGTCTTGTTAGCTGAGATTT 57.407 33.333 0.00 0.00 38.76 2.17
3140 3351 2.355444 TGAACGAACATGGCATGCATAG 59.645 45.455 26.70 17.66 0.00 2.23
3141 3352 2.363683 TGAACGAACATGGCATGCATA 58.636 42.857 26.70 8.30 0.00 3.14
3255 3466 4.164030 ACTGTGGTATTCCTGCATGATACA 59.836 41.667 0.00 5.54 34.23 2.29
3312 3531 1.931172 CGTGTCCGTCCATCCATTAAC 59.069 52.381 0.00 0.00 0.00 2.01
3348 3567 1.987306 TGGCGTGCATGGAGGAGTA 60.987 57.895 11.38 0.00 0.00 2.59
3395 3614 9.520515 AATCTGTATTTCTGTGAAAATACCACT 57.479 29.630 13.87 0.65 45.35 4.00
3421 3640 3.117663 AGGGAGTGCAAGGTAGTTTTCAA 60.118 43.478 0.00 0.00 0.00 2.69
3429 3648 1.729586 ACAAGAGGGAGTGCAAGGTA 58.270 50.000 0.00 0.00 0.00 3.08
3430 3649 1.729586 TACAAGAGGGAGTGCAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
3431 3650 2.814336 GTTTACAAGAGGGAGTGCAAGG 59.186 50.000 0.00 0.00 0.00 3.61
3432 3651 3.744660 AGTTTACAAGAGGGAGTGCAAG 58.255 45.455 0.00 0.00 0.00 4.01
3433 3652 3.857157 AGTTTACAAGAGGGAGTGCAA 57.143 42.857 0.00 0.00 0.00 4.08
3482 3709 5.118817 GGCGACTTGTATATAGCTAAAGTGC 59.881 44.000 11.55 13.40 31.45 4.40
3483 3710 6.363626 CAGGCGACTTGTATATAGCTAAAGTG 59.636 42.308 11.55 6.47 40.21 3.16
3484 3711 6.264744 TCAGGCGACTTGTATATAGCTAAAGT 59.735 38.462 7.35 7.35 40.21 2.66
3485 3712 6.678878 TCAGGCGACTTGTATATAGCTAAAG 58.321 40.000 0.00 0.00 40.21 1.85
3486 3713 6.644248 TCAGGCGACTTGTATATAGCTAAA 57.356 37.500 0.00 0.00 40.21 1.85
3487 3714 6.644248 TTCAGGCGACTTGTATATAGCTAA 57.356 37.500 0.00 0.00 40.21 3.09
3488 3715 6.644248 TTTCAGGCGACTTGTATATAGCTA 57.356 37.500 0.00 0.00 40.21 3.32
3489 3716 5.531122 TTTCAGGCGACTTGTATATAGCT 57.469 39.130 0.00 0.00 40.21 3.32
3490 3717 6.787085 AATTTCAGGCGACTTGTATATAGC 57.213 37.500 0.00 0.00 40.21 2.97
3495 3722 9.139174 CAAATTTAAATTTCAGGCGACTTGTAT 57.861 29.630 20.71 0.00 35.83 2.29
3496 3723 7.596995 CCAAATTTAAATTTCAGGCGACTTGTA 59.403 33.333 20.71 0.00 35.83 2.41
3497 3724 6.423604 CCAAATTTAAATTTCAGGCGACTTGT 59.576 34.615 20.71 0.00 35.83 3.16
3498 3725 6.128580 CCCAAATTTAAATTTCAGGCGACTTG 60.129 38.462 20.71 8.56 35.83 3.16
3499 3726 5.931724 CCCAAATTTAAATTTCAGGCGACTT 59.068 36.000 20.71 0.00 35.83 3.01
3500 3727 5.011635 ACCCAAATTTAAATTTCAGGCGACT 59.988 36.000 25.68 12.84 37.61 4.18
3501 3728 5.234752 ACCCAAATTTAAATTTCAGGCGAC 58.765 37.500 25.68 0.00 36.52 5.19
3502 3729 5.476091 ACCCAAATTTAAATTTCAGGCGA 57.524 34.783 25.68 0.00 36.52 5.54
3503 3730 6.871492 ACTTACCCAAATTTAAATTTCAGGCG 59.129 34.615 25.68 19.69 36.52 5.52
3504 3731 7.875554 TGACTTACCCAAATTTAAATTTCAGGC 59.124 33.333 25.68 17.84 36.52 4.85
3505 3732 9.203421 GTGACTTACCCAAATTTAAATTTCAGG 57.797 33.333 24.84 24.84 36.52 3.86
3506 3733 9.981114 AGTGACTTACCCAAATTTAAATTTCAG 57.019 29.630 20.71 16.90 36.52 3.02
3514 3741 9.416284 AGAGAAAAAGTGACTTACCCAAATTTA 57.584 29.630 0.00 0.00 0.00 1.40
3515 3742 8.306313 AGAGAAAAAGTGACTTACCCAAATTT 57.694 30.769 0.00 0.00 0.00 1.82
3516 3743 7.898014 AGAGAAAAAGTGACTTACCCAAATT 57.102 32.000 0.00 0.00 0.00 1.82
3517 3744 7.898014 AAGAGAAAAAGTGACTTACCCAAAT 57.102 32.000 0.00 0.00 0.00 2.32
3518 3745 7.177744 ACAAAGAGAAAAAGTGACTTACCCAAA 59.822 33.333 0.00 0.00 0.00 3.28
3519 3746 6.661805 ACAAAGAGAAAAAGTGACTTACCCAA 59.338 34.615 0.00 0.00 0.00 4.12
3520 3747 6.184789 ACAAAGAGAAAAAGTGACTTACCCA 58.815 36.000 0.00 0.00 0.00 4.51
3521 3748 6.694877 ACAAAGAGAAAAAGTGACTTACCC 57.305 37.500 0.00 0.00 0.00 3.69
3522 3749 9.274206 AGATACAAAGAGAAAAAGTGACTTACC 57.726 33.333 0.00 0.00 0.00 2.85
3526 3753 9.699703 GACTAGATACAAAGAGAAAAAGTGACT 57.300 33.333 0.00 0.00 0.00 3.41
3527 3754 8.640291 CGACTAGATACAAAGAGAAAAAGTGAC 58.360 37.037 0.00 0.00 0.00 3.67
3528 3755 7.813148 CCGACTAGATACAAAGAGAAAAAGTGA 59.187 37.037 0.00 0.00 0.00 3.41
3529 3756 7.599245 ACCGACTAGATACAAAGAGAAAAAGTG 59.401 37.037 0.00 0.00 0.00 3.16
3530 3757 7.668492 ACCGACTAGATACAAAGAGAAAAAGT 58.332 34.615 0.00 0.00 0.00 2.66
3531 3758 7.275999 GGACCGACTAGATACAAAGAGAAAAAG 59.724 40.741 0.00 0.00 0.00 2.27
3532 3759 7.039223 AGGACCGACTAGATACAAAGAGAAAAA 60.039 37.037 0.00 0.00 0.00 1.94
3533 3760 6.436532 AGGACCGACTAGATACAAAGAGAAAA 59.563 38.462 0.00 0.00 0.00 2.29
3534 3761 5.950549 AGGACCGACTAGATACAAAGAGAAA 59.049 40.000 0.00 0.00 0.00 2.52
3535 3762 5.507637 AGGACCGACTAGATACAAAGAGAA 58.492 41.667 0.00 0.00 0.00 2.87
3536 3763 5.113446 AGGACCGACTAGATACAAAGAGA 57.887 43.478 0.00 0.00 0.00 3.10
3537 3764 5.838531 AAGGACCGACTAGATACAAAGAG 57.161 43.478 0.00 0.00 0.00 2.85
3538 3765 5.713389 TGAAAGGACCGACTAGATACAAAGA 59.287 40.000 0.00 0.00 0.00 2.52
3539 3766 5.805994 GTGAAAGGACCGACTAGATACAAAG 59.194 44.000 0.00 0.00 0.00 2.77
3540 3767 5.337009 GGTGAAAGGACCGACTAGATACAAA 60.337 44.000 0.00 0.00 0.00 2.83
3541 3768 4.159135 GGTGAAAGGACCGACTAGATACAA 59.841 45.833 0.00 0.00 0.00 2.41
3542 3769 3.698040 GGTGAAAGGACCGACTAGATACA 59.302 47.826 0.00 0.00 0.00 2.29
3543 3770 3.952967 AGGTGAAAGGACCGACTAGATAC 59.047 47.826 0.00 0.00 41.35 2.24
3544 3771 4.246712 AGGTGAAAGGACCGACTAGATA 57.753 45.455 0.00 0.00 41.35 1.98
3545 3772 3.103080 AGGTGAAAGGACCGACTAGAT 57.897 47.619 0.00 0.00 41.35 1.98
3546 3773 2.599408 AGGTGAAAGGACCGACTAGA 57.401 50.000 0.00 0.00 41.35 2.43
3547 3774 3.326747 CAAAGGTGAAAGGACCGACTAG 58.673 50.000 0.00 0.00 41.35 2.57
3548 3775 2.038033 CCAAAGGTGAAAGGACCGACTA 59.962 50.000 0.00 0.00 41.35 2.59
3549 3776 1.202770 CCAAAGGTGAAAGGACCGACT 60.203 52.381 0.00 0.00 41.35 4.18
3550 3777 1.235724 CCAAAGGTGAAAGGACCGAC 58.764 55.000 0.00 0.00 41.35 4.79
3551 3778 0.841289 ACCAAAGGTGAAAGGACCGA 59.159 50.000 0.00 0.00 41.35 4.69
3552 3779 2.554370 TACCAAAGGTGAAAGGACCG 57.446 50.000 0.00 0.00 41.35 4.79
3553 3780 4.587262 ACAAATACCAAAGGTGAAAGGACC 59.413 41.667 0.00 0.00 36.19 4.46
3554 3781 5.784578 ACAAATACCAAAGGTGAAAGGAC 57.215 39.130 0.00 0.00 36.19 3.85
3555 3782 7.064229 ACTAACAAATACCAAAGGTGAAAGGA 58.936 34.615 0.00 0.00 36.19 3.36
3556 3783 7.284919 ACTAACAAATACCAAAGGTGAAAGG 57.715 36.000 0.00 0.00 36.19 3.11
3557 3784 7.041644 TCGACTAACAAATACCAAAGGTGAAAG 60.042 37.037 0.00 0.00 36.19 2.62
3558 3785 6.766944 TCGACTAACAAATACCAAAGGTGAAA 59.233 34.615 0.00 0.00 36.19 2.69
3559 3786 6.203338 GTCGACTAACAAATACCAAAGGTGAA 59.797 38.462 8.70 0.00 36.19 3.18
3560 3787 5.697633 GTCGACTAACAAATACCAAAGGTGA 59.302 40.000 8.70 0.00 36.19 4.02
3561 3788 5.699458 AGTCGACTAACAAATACCAAAGGTG 59.301 40.000 18.46 0.00 36.19 4.00
3562 3789 5.699458 CAGTCGACTAACAAATACCAAAGGT 59.301 40.000 19.57 0.00 40.16 3.50
3563 3790 5.929992 TCAGTCGACTAACAAATACCAAAGG 59.070 40.000 19.57 0.00 0.00 3.11
3564 3791 6.818416 GTCAGTCGACTAACAAATACCAAAG 58.182 40.000 19.57 0.26 39.22 2.77
3565 3792 6.774354 GTCAGTCGACTAACAAATACCAAA 57.226 37.500 19.57 0.00 39.22 3.28
3579 3806 7.858583 ACAAACCTAAATTTTAGTCAGTCGAC 58.141 34.615 7.70 7.70 42.95 4.20
3580 3807 8.441312 AACAAACCTAAATTTTAGTCAGTCGA 57.559 30.769 13.68 0.00 0.00 4.20
3597 3824 9.996554 CTTATCCCAAAAAGAATTAACAAACCT 57.003 29.630 0.00 0.00 0.00 3.50
3598 3825 9.772973 ACTTATCCCAAAAAGAATTAACAAACC 57.227 29.630 0.00 0.00 0.00 3.27
3612 3839 9.689501 AGGACGAAAAATATACTTATCCCAAAA 57.310 29.630 0.00 0.00 0.00 2.44
3613 3840 9.333724 GAGGACGAAAAATATACTTATCCCAAA 57.666 33.333 0.00 0.00 0.00 3.28
3614 3841 7.654520 CGAGGACGAAAAATATACTTATCCCAA 59.345 37.037 0.00 0.00 42.66 4.12
3615 3842 7.014518 TCGAGGACGAAAAATATACTTATCCCA 59.985 37.037 0.00 0.00 45.74 4.37
3616 3843 7.373493 TCGAGGACGAAAAATATACTTATCCC 58.627 38.462 0.00 0.00 45.74 3.85
3631 3858 1.879372 TCGGAAGAGTTCGAGGACGAA 60.879 52.381 0.00 0.00 44.78 3.85
3632 3859 0.321034 TCGGAAGAGTTCGAGGACGA 60.321 55.000 0.00 0.00 40.38 4.20
3633 3860 2.168947 TCGGAAGAGTTCGAGGACG 58.831 57.895 0.00 0.00 36.84 4.79
3643 3870 7.779837 AGACGACTTCTAAACTCTCGGAAGAG 61.780 46.154 8.27 0.96 46.44 2.85
3644 3871 4.070716 ACGACTTCTAAACTCTCGGAAGA 58.929 43.478 8.27 0.00 38.64 2.87
3645 3872 4.154556 AGACGACTTCTAAACTCTCGGAAG 59.845 45.833 0.00 0.00 40.41 3.46
3646 3873 4.070716 AGACGACTTCTAAACTCTCGGAA 58.929 43.478 0.00 0.00 30.17 4.30
3647 3874 3.672808 AGACGACTTCTAAACTCTCGGA 58.327 45.455 0.00 0.00 30.17 4.55
3648 3875 3.685756 AGAGACGACTTCTAAACTCTCGG 59.314 47.826 0.00 0.00 33.22 4.63
3649 3876 4.889241 GAGAGACGACTTCTAAACTCTCG 58.111 47.826 0.00 0.00 40.13 4.04
3650 3877 5.866335 TGAGAGACGACTTCTAAACTCTC 57.134 43.478 0.00 0.00 45.70 3.20
3651 3878 5.766174 AGTTGAGAGACGACTTCTAAACTCT 59.234 40.000 10.51 0.00 40.00 3.24
3652 3879 6.004408 AGTTGAGAGACGACTTCTAAACTC 57.996 41.667 10.51 3.41 40.00 3.01
3653 3880 6.485984 TGTAGTTGAGAGACGACTTCTAAACT 59.514 38.462 16.70 16.70 42.58 2.66
3654 3881 6.666417 TGTAGTTGAGAGACGACTTCTAAAC 58.334 40.000 0.00 0.00 42.58 2.01
3655 3882 6.872628 TGTAGTTGAGAGACGACTTCTAAA 57.127 37.500 0.00 0.00 42.58 1.85
3656 3883 6.872628 TTGTAGTTGAGAGACGACTTCTAA 57.127 37.500 0.00 0.00 42.58 2.10
3657 3884 6.872628 TTTGTAGTTGAGAGACGACTTCTA 57.127 37.500 0.00 0.00 42.58 2.10
3658 3885 5.769484 TTTGTAGTTGAGAGACGACTTCT 57.231 39.130 0.00 0.00 42.58 2.85
3659 3886 5.747197 TGTTTTGTAGTTGAGAGACGACTTC 59.253 40.000 0.00 0.00 42.58 3.01
3660 3887 5.657474 TGTTTTGTAGTTGAGAGACGACTT 58.343 37.500 0.00 0.00 42.58 3.01
3661 3888 5.067413 TCTGTTTTGTAGTTGAGAGACGACT 59.933 40.000 0.00 0.00 44.53 4.18
3662 3889 5.279384 TCTGTTTTGTAGTTGAGAGACGAC 58.721 41.667 0.00 0.00 0.00 4.34
3663 3890 5.509716 TCTGTTTTGTAGTTGAGAGACGA 57.490 39.130 0.00 0.00 0.00 4.20
3664 3891 7.085116 ACTATCTGTTTTGTAGTTGAGAGACG 58.915 38.462 0.00 0.00 0.00 4.18
3665 3892 8.819643 AACTATCTGTTTTGTAGTTGAGAGAC 57.180 34.615 0.00 0.00 37.30 3.36
3680 3907 4.884668 TGAGGGACGAAAACTATCTGTT 57.115 40.909 0.00 0.00 41.29 3.16
3681 3908 4.566987 GTTGAGGGACGAAAACTATCTGT 58.433 43.478 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.