Multiple sequence alignment - TraesCS4D01G336800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G336800 chr4D 100.000 8378 0 0 1 8378 494293673 494285296 0.000000e+00 15472.0
1 TraesCS4D01G336800 chr4D 95.556 45 1 1 4934 4978 494288664 494288621 4.200000e-08 71.3
2 TraesCS4D01G336800 chr4D 95.556 45 1 1 5010 5053 494288740 494288696 4.200000e-08 71.3
3 TraesCS4D01G336800 chr5A 93.048 3510 125 32 3046 6522 673789071 673785648 0.000000e+00 5020.0
4 TraesCS4D01G336800 chr5A 91.660 1331 64 20 6464 7759 673785648 673784330 0.000000e+00 1799.0
5 TraesCS4D01G336800 chr5A 86.813 819 38 24 807 1601 673791505 673790733 0.000000e+00 850.0
6 TraesCS4D01G336800 chr5A 88.209 670 32 12 2240 2865 673789815 673789149 0.000000e+00 756.0
7 TraesCS4D01G336800 chr5A 90.909 440 36 3 6 445 673793417 673792982 9.370000e-164 588.0
8 TraesCS4D01G336800 chr5A 83.878 459 27 13 1760 2199 673790570 673790140 2.190000e-105 394.0
9 TraesCS4D01G336800 chr5A 91.803 183 14 1 526 707 673791693 673791511 3.880000e-63 254.0
10 TraesCS4D01G336800 chr5A 86.093 151 12 5 8057 8200 15013064 15013212 4.050000e-33 154.0
11 TraesCS4D01G336800 chr5A 86.508 126 10 3 8259 8378 673783180 673783056 1.900000e-26 132.0
12 TraesCS4D01G336800 chr5A 95.385 65 3 0 2859 2923 377323065 377323129 4.140000e-18 104.0
13 TraesCS4D01G336800 chr5A 87.097 93 9 3 703 793 645276323 645276414 1.490000e-17 102.0
14 TraesCS4D01G336800 chr5A 85.870 92 10 3 710 799 269784091 269784001 2.490000e-15 95.3
15 TraesCS4D01G336800 chr5A 86.747 83 5 2 2859 2940 687680989 687681066 4.170000e-13 87.9
16 TraesCS4D01G336800 chr5A 95.556 45 1 1 5010 5053 673787217 673787173 4.200000e-08 71.3
17 TraesCS4D01G336800 chr5A 93.478 46 3 0 702 747 44576711 44576756 1.510000e-07 69.4
18 TraesCS4D01G336800 chr5A 92.500 40 2 1 4934 4973 673787141 673787103 1.000000e-03 56.5
19 TraesCS4D01G336800 chr4B 92.904 2889 112 39 1581 4395 633784321 633781452 0.000000e+00 4113.0
20 TraesCS4D01G336800 chr4B 93.555 1536 64 17 5896 7424 633779308 633777801 0.000000e+00 2255.0
21 TraesCS4D01G336800 chr4B 95.639 1330 37 10 4383 5700 633781265 633779945 0.000000e+00 2115.0
22 TraesCS4D01G336800 chr4B 86.815 766 41 17 813 1531 633785074 633784322 0.000000e+00 800.0
23 TraesCS4D01G336800 chr4B 91.485 505 34 7 7 509 633787383 633786886 0.000000e+00 686.0
24 TraesCS4D01G336800 chr4B 93.011 186 11 1 1315 1498 276427308 276427123 3.850000e-68 270.0
25 TraesCS4D01G336800 chr4B 92.473 186 12 1 1315 1498 276395622 276395437 1.790000e-66 265.0
26 TraesCS4D01G336800 chr4B 89.840 187 14 3 5712 5897 633779614 633779432 1.410000e-57 235.0
27 TraesCS4D01G336800 chr4B 96.739 92 3 0 616 707 633785188 633785097 4.050000e-33 154.0
28 TraesCS4D01G336800 chr4B 85.600 125 9 5 7494 7618 633777295 633777180 1.140000e-23 122.0
29 TraesCS4D01G336800 chr1A 84.921 756 99 10 3065 3817 109430794 109430051 0.000000e+00 750.0
30 TraesCS4D01G336800 chr1A 83.922 765 107 11 3065 3817 54010365 54009605 0.000000e+00 717.0
31 TraesCS4D01G336800 chr1A 87.500 104 10 3 698 799 6567084 6567186 5.310000e-22 117.0
32 TraesCS4D01G336800 chr4A 84.921 756 97 13 3065 3817 76386383 76385642 0.000000e+00 749.0
33 TraesCS4D01G336800 chr4A 87.662 154 11 4 8058 8204 172315372 172315220 1.120000e-38 172.0
34 TraesCS4D01G336800 chr4A 84.314 102 12 4 704 803 732375926 732375827 6.920000e-16 97.1
35 TraesCS4D01G336800 chr6B 83.833 767 106 11 3065 3817 710146766 710147528 0.000000e+00 713.0
36 TraesCS4D01G336800 chr6B 83.255 424 47 12 3812 4218 55707825 55707409 1.330000e-97 368.0
37 TraesCS4D01G336800 chr6B 85.081 248 23 10 3069 3314 55717218 55716983 3.020000e-59 241.0
38 TraesCS4D01G336800 chr6A 83.594 768 106 13 3065 3817 514354622 514353860 0.000000e+00 702.0
39 TraesCS4D01G336800 chr6A 83.357 691 95 13 3142 3817 514347560 514346875 9.240000e-174 621.0
40 TraesCS4D01G336800 chr6A 88.235 289 30 4 3046 3333 583721342 583721057 8.050000e-90 342.0
41 TraesCS4D01G336800 chrUn 88.215 297 32 3 3065 3359 103774684 103774389 1.340000e-92 351.0
42 TraesCS4D01G336800 chrUn 81.010 416 51 14 3812 4218 103774367 103773971 1.060000e-78 305.0
43 TraesCS4D01G336800 chr3B 91.364 220 15 3 1315 1531 111530603 111530385 1.770000e-76 298.0
44 TraesCS4D01G336800 chr3B 95.062 162 6 1 1323 1482 772990618 772990779 3.880000e-63 254.0
45 TraesCS4D01G336800 chr3B 86.826 167 10 6 1575 1732 772990843 772991006 8.640000e-40 176.0
46 TraesCS4D01G336800 chr3B 85.987 157 10 6 8058 8204 129685077 129684923 3.130000e-34 158.0
47 TraesCS4D01G336800 chr3B 91.489 94 5 2 1957 2047 111510265 111510172 8.830000e-25 126.0
48 TraesCS4D01G336800 chr3B 88.608 79 3 2 2856 2933 814617200 814617127 3.220000e-14 91.6
49 TraesCS4D01G336800 chr2B 93.443 183 12 0 1316 1498 37602661 37602843 1.070000e-68 272.0
50 TraesCS4D01G336800 chr5B 91.837 147 12 0 1315 1461 78092357 78092503 1.100000e-48 206.0
51 TraesCS4D01G336800 chr5B 87.654 81 3 4 2856 2936 485658435 485658508 4.170000e-13 87.9
52 TraesCS4D01G336800 chr5B 87.342 79 4 2 2856 2933 621230294 621230367 1.500000e-12 86.1
53 TraesCS4D01G336800 chr1B 89.172 157 5 6 8058 8204 623195844 623195690 1.440000e-42 185.0
54 TraesCS4D01G336800 chr2D 88.608 158 6 6 8058 8205 81004918 81004763 1.860000e-41 182.0
55 TraesCS4D01G336800 chr2D 89.362 94 9 1 702 794 404087910 404088003 5.310000e-22 117.0
56 TraesCS4D01G336800 chr6D 87.898 157 7 6 8058 8204 423084322 423084168 3.110000e-39 174.0
57 TraesCS4D01G336800 chr7A 87.838 148 8 6 8058 8197 358737561 358737416 1.870000e-36 165.0
58 TraesCS4D01G336800 chr7A 97.802 91 2 0 1315 1405 74524211 74524301 3.130000e-34 158.0
59 TraesCS4D01G336800 chr7B 86.624 157 9 6 8058 8204 713953572 713953418 6.730000e-36 163.0
60 TraesCS4D01G336800 chr7B 88.406 69 6 2 701 768 222341405 222341472 1.940000e-11 82.4
61 TraesCS4D01G336800 chr1D 86.624 157 9 6 8058 8204 443117355 443117201 6.730000e-36 163.0
62 TraesCS4D01G336800 chr1D 89.333 75 2 2 2859 2932 377006979 377006910 1.160000e-13 89.8
63 TraesCS4D01G336800 chr7D 88.000 100 9 3 702 799 598162833 598162735 1.910000e-21 115.0
64 TraesCS4D01G336800 chr7D 92.105 76 3 2 2855 2930 161481064 161480992 4.140000e-18 104.0
65 TraesCS4D01G336800 chr2A 88.298 94 10 1 702 794 542456237 542456330 2.470000e-20 111.0
66 TraesCS4D01G336800 chr3A 81.481 108 10 5 2856 2962 528009307 528009209 6.970000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G336800 chr4D 494285296 494293673 8377 True 15472.00 15472 100.000000 1 8378 1 chr4D.!!$R1 8377
1 TraesCS4D01G336800 chr5A 673783056 673793417 10361 True 992.08 5020 90.088400 6 8378 10 chr5A.!!$R2 8372
2 TraesCS4D01G336800 chr4B 633777180 633787383 10203 True 1310.00 4113 91.572125 7 7618 8 chr4B.!!$R3 7611
3 TraesCS4D01G336800 chr1A 109430051 109430794 743 True 750.00 750 84.921000 3065 3817 1 chr1A.!!$R2 752
4 TraesCS4D01G336800 chr1A 54009605 54010365 760 True 717.00 717 83.922000 3065 3817 1 chr1A.!!$R1 752
5 TraesCS4D01G336800 chr4A 76385642 76386383 741 True 749.00 749 84.921000 3065 3817 1 chr4A.!!$R1 752
6 TraesCS4D01G336800 chr6B 710146766 710147528 762 False 713.00 713 83.833000 3065 3817 1 chr6B.!!$F1 752
7 TraesCS4D01G336800 chr6A 514353860 514354622 762 True 702.00 702 83.594000 3065 3817 1 chr6A.!!$R2 752
8 TraesCS4D01G336800 chr6A 514346875 514347560 685 True 621.00 621 83.357000 3142 3817 1 chr6A.!!$R1 675
9 TraesCS4D01G336800 chrUn 103773971 103774684 713 True 328.00 351 84.612500 3065 4218 2 chrUn.!!$R1 1153

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
797 2448 0.550638 TAATTTGGGACGGAGGGGGT 60.551 55.000 0.00 0.00 0.00 4.95 F
1748 3495 0.523072 CCAACTGATCCACGCCTTTG 59.477 55.000 0.00 0.00 0.00 2.77 F
2563 4694 0.181587 ACGGGACATGAAACACCACA 59.818 50.000 0.00 0.00 0.00 4.17 F
3365 5547 1.000938 CAGCTTGAGTTGAAACCAGGC 60.001 52.381 9.29 9.29 34.68 4.85 F
4364 6700 2.608623 AGGGGAAAGGTTGTTCAATGG 58.391 47.619 0.00 0.00 0.00 3.16 F
5707 8281 1.006998 TGCCCATGCACCCTATTTTCT 59.993 47.619 0.00 0.00 44.23 2.52 F
7233 10315 0.107654 GTGTAGGATCTGGTGGTGCC 60.108 60.000 0.00 0.00 37.90 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1916 3721 1.001406 AGAAGAGAAACAGAGCACGGG 59.999 52.381 0.00 0.00 0.00 5.28 R
3601 5784 3.420893 ACCCGAACACATCACAATTCAT 58.579 40.909 0.00 0.00 0.00 2.57 R
4265 6601 3.242413 CGGTTGCCTGATCAGTTATTTCG 60.242 47.826 21.11 13.02 0.00 3.46 R
4604 7136 3.207265 TGCCTACAAAAAGAGACTGCA 57.793 42.857 0.00 0.00 0.00 4.41 R
6354 9348 1.933853 ACAAGATGATCCGTAAAGCGC 59.066 47.619 0.00 0.00 39.71 5.92 R
7367 10451 0.169009 GAGGCACAACGAGAAATGGC 59.831 55.000 0.00 0.00 37.87 4.40 R
8300 12612 1.302383 TAGGATTTGGTGCGTTGCGG 61.302 55.000 0.00 0.00 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 8.614346 CATCCATTTTGAAAAACAGTTCACAAT 58.386 29.630 0.00 0.00 38.04 2.71
202 203 6.509418 TTTCTAAAAATGTTCCCATCCTCG 57.491 37.500 0.00 0.00 0.00 4.63
267 268 2.632512 TGCTCCTTCAAAAATTGTCCCC 59.367 45.455 0.00 0.00 0.00 4.81
271 274 4.471548 TCCTTCAAAAATTGTCCCCGTTA 58.528 39.130 0.00 0.00 0.00 3.18
272 275 5.081032 TCCTTCAAAAATTGTCCCCGTTAT 58.919 37.500 0.00 0.00 0.00 1.89
292 295 9.527566 CCGTTATTTTTAATTGTTTGCATTGAG 57.472 29.630 0.00 0.00 0.00 3.02
361 364 2.483877 TGTTTAGATTTGTCGCTGCTGG 59.516 45.455 0.00 0.00 0.00 4.85
372 375 1.202592 TCGCTGCTGGTAGTTCAACAA 60.203 47.619 0.00 0.00 0.00 2.83
402 405 1.142748 AGCTCATGTGGCTAGCGAC 59.857 57.895 21.67 21.67 41.19 5.19
468 471 2.239907 ACAGTTTGGGGAGATTCTAGCC 59.760 50.000 0.00 0.00 0.00 3.93
475 478 2.356844 GGGGAGATTCTAGCCGGTTTTT 60.357 50.000 1.90 0.00 0.00 1.94
476 479 2.943690 GGGAGATTCTAGCCGGTTTTTC 59.056 50.000 1.90 0.00 0.00 2.29
480 483 5.183331 GGAGATTCTAGCCGGTTTTTCTTTT 59.817 40.000 1.90 0.00 0.00 2.27
481 484 6.013842 AGATTCTAGCCGGTTTTTCTTTTG 57.986 37.500 1.90 0.00 0.00 2.44
491 494 5.320723 CGGTTTTTCTTTTGTTTTTCTGCC 58.679 37.500 0.00 0.00 0.00 4.85
497 500 9.457110 TTTTTCTTTTGTTTTTCTGCCTTTTTC 57.543 25.926 0.00 0.00 0.00 2.29
498 501 7.977789 TTCTTTTGTTTTTCTGCCTTTTTCT 57.022 28.000 0.00 0.00 0.00 2.52
500 503 9.495572 TTCTTTTGTTTTTCTGCCTTTTTCTTA 57.504 25.926 0.00 0.00 0.00 2.10
540 1844 4.825085 TCGTTTTGGATTTGGCTTAGAACT 59.175 37.500 0.00 0.00 0.00 3.01
556 1861 6.183360 GCTTAGAACTGAATCATGGTTTCCTC 60.183 42.308 0.00 0.00 0.00 3.71
577 1882 4.523083 TCTGGGATATTCCTTCGGTTTTG 58.477 43.478 0.57 0.00 36.57 2.44
578 1883 3.626930 TGGGATATTCCTTCGGTTTTGG 58.373 45.455 0.57 0.00 36.57 3.28
707 2358 8.230486 CCATATTCGCATCCAAAACTTATACTC 58.770 37.037 0.00 0.00 0.00 2.59
708 2359 6.619801 ATTCGCATCCAAAACTTATACTCC 57.380 37.500 0.00 0.00 0.00 3.85
709 2360 4.448210 TCGCATCCAAAACTTATACTCCC 58.552 43.478 0.00 0.00 0.00 4.30
711 2362 4.511826 CGCATCCAAAACTTATACTCCCTC 59.488 45.833 0.00 0.00 0.00 4.30
712 2363 4.822350 GCATCCAAAACTTATACTCCCTCC 59.178 45.833 0.00 0.00 0.00 4.30
713 2364 5.377478 CATCCAAAACTTATACTCCCTCCC 58.623 45.833 0.00 0.00 0.00 4.30
714 2365 4.706616 TCCAAAACTTATACTCCCTCCCT 58.293 43.478 0.00 0.00 0.00 4.20
715 2366 4.720273 TCCAAAACTTATACTCCCTCCCTC 59.280 45.833 0.00 0.00 0.00 4.30
716 2367 4.141459 CCAAAACTTATACTCCCTCCCTCC 60.141 50.000 0.00 0.00 0.00 4.30
717 2368 3.347759 AACTTATACTCCCTCCCTCCC 57.652 52.381 0.00 0.00 0.00 4.30
718 2369 2.233178 ACTTATACTCCCTCCCTCCCA 58.767 52.381 0.00 0.00 0.00 4.37
719 2370 2.595380 ACTTATACTCCCTCCCTCCCAA 59.405 50.000 0.00 0.00 0.00 4.12
720 2371 3.014807 ACTTATACTCCCTCCCTCCCAAA 59.985 47.826 0.00 0.00 0.00 3.28
721 2372 2.680439 ATACTCCCTCCCTCCCAAAA 57.320 50.000 0.00 0.00 0.00 2.44
722 2373 2.680439 TACTCCCTCCCTCCCAAAAT 57.320 50.000 0.00 0.00 0.00 1.82
723 2374 2.680439 ACTCCCTCCCTCCCAAAATA 57.320 50.000 0.00 0.00 0.00 1.40
724 2375 2.942905 ACTCCCTCCCTCCCAAAATAA 58.057 47.619 0.00 0.00 0.00 1.40
725 2376 2.853077 ACTCCCTCCCTCCCAAAATAAG 59.147 50.000 0.00 0.00 0.00 1.73
726 2377 2.853077 CTCCCTCCCTCCCAAAATAAGT 59.147 50.000 0.00 0.00 0.00 2.24
727 2378 2.580783 TCCCTCCCTCCCAAAATAAGTG 59.419 50.000 0.00 0.00 0.00 3.16
728 2379 2.580783 CCCTCCCTCCCAAAATAAGTGA 59.419 50.000 0.00 0.00 0.00 3.41
729 2380 3.621558 CCTCCCTCCCAAAATAAGTGAC 58.378 50.000 0.00 0.00 0.00 3.67
730 2381 3.267031 CCTCCCTCCCAAAATAAGTGACT 59.733 47.826 0.00 0.00 0.00 3.41
731 2382 4.518249 CTCCCTCCCAAAATAAGTGACTC 58.482 47.826 0.00 0.00 0.00 3.36
732 2383 3.913799 TCCCTCCCAAAATAAGTGACTCA 59.086 43.478 0.00 0.00 0.00 3.41
733 2384 4.352595 TCCCTCCCAAAATAAGTGACTCAA 59.647 41.667 0.00 0.00 0.00 3.02
734 2385 4.459337 CCCTCCCAAAATAAGTGACTCAAC 59.541 45.833 0.00 0.00 0.00 3.18
735 2386 5.316987 CCTCCCAAAATAAGTGACTCAACT 58.683 41.667 0.00 0.00 0.00 3.16
736 2387 5.770162 CCTCCCAAAATAAGTGACTCAACTT 59.230 40.000 0.00 0.00 42.89 2.66
737 2388 6.072452 CCTCCCAAAATAAGTGACTCAACTTC 60.072 42.308 0.00 0.00 40.77 3.01
738 2389 5.468746 TCCCAAAATAAGTGACTCAACTTCG 59.531 40.000 0.00 0.00 40.77 3.79
739 2390 5.238650 CCCAAAATAAGTGACTCAACTTCGT 59.761 40.000 0.00 0.00 40.77 3.85
740 2391 6.425721 CCCAAAATAAGTGACTCAACTTCGTA 59.574 38.462 0.00 0.00 40.77 3.43
741 2392 7.288672 CCAAAATAAGTGACTCAACTTCGTAC 58.711 38.462 0.00 0.00 40.77 3.67
742 2393 7.288672 CAAAATAAGTGACTCAACTTCGTACC 58.711 38.462 0.00 0.00 40.77 3.34
743 2394 5.717078 ATAAGTGACTCAACTTCGTACCA 57.283 39.130 0.00 0.00 40.77 3.25
744 2395 4.395959 AAGTGACTCAACTTCGTACCAA 57.604 40.909 0.00 0.00 35.44 3.67
745 2396 3.714391 AGTGACTCAACTTCGTACCAAC 58.286 45.455 0.00 0.00 0.00 3.77
746 2397 3.383825 AGTGACTCAACTTCGTACCAACT 59.616 43.478 0.00 0.00 0.00 3.16
747 2398 3.734735 GTGACTCAACTTCGTACCAACTC 59.265 47.826 0.00 0.00 0.00 3.01
748 2399 3.243636 TGACTCAACTTCGTACCAACTCC 60.244 47.826 0.00 0.00 0.00 3.85
749 2400 2.288030 ACTCAACTTCGTACCAACTCCG 60.288 50.000 0.00 0.00 0.00 4.63
750 2401 1.682854 TCAACTTCGTACCAACTCCGT 59.317 47.619 0.00 0.00 0.00 4.69
751 2402 2.884012 TCAACTTCGTACCAACTCCGTA 59.116 45.455 0.00 0.00 0.00 4.02
752 2403 2.982470 CAACTTCGTACCAACTCCGTAC 59.018 50.000 0.00 0.00 34.08 3.67
753 2404 2.508526 ACTTCGTACCAACTCCGTACT 58.491 47.619 0.00 0.00 35.06 2.73
754 2405 3.674997 ACTTCGTACCAACTCCGTACTA 58.325 45.455 0.00 0.00 35.06 1.82
755 2406 4.072131 ACTTCGTACCAACTCCGTACTAA 58.928 43.478 0.00 0.00 35.06 2.24
756 2407 4.518970 ACTTCGTACCAACTCCGTACTAAA 59.481 41.667 0.00 0.00 35.06 1.85
757 2408 4.685169 TCGTACCAACTCCGTACTAAAG 57.315 45.455 0.00 0.00 35.06 1.85
758 2409 4.072131 TCGTACCAACTCCGTACTAAAGT 58.928 43.478 0.00 0.00 35.06 2.66
759 2410 4.518970 TCGTACCAACTCCGTACTAAAGTT 59.481 41.667 0.00 0.00 35.06 2.66
760 2411 5.703592 TCGTACCAACTCCGTACTAAAGTTA 59.296 40.000 4.66 0.00 35.06 2.24
761 2412 6.024049 CGTACCAACTCCGTACTAAAGTTAG 58.976 44.000 4.66 0.00 35.06 2.34
762 2413 6.348540 CGTACCAACTCCGTACTAAAGTTAGT 60.349 42.308 8.67 8.67 45.39 2.24
763 2414 7.148474 CGTACCAACTCCGTACTAAAGTTAGTA 60.148 40.741 6.81 6.81 43.36 1.82
789 2440 8.079809 ACAAAATAAGTCACTTAATTTGGGACG 58.920 33.333 29.35 13.62 44.45 4.79
790 2441 6.753107 AATAAGTCACTTAATTTGGGACGG 57.247 37.500 0.16 0.00 33.84 4.79
791 2442 4.360951 AAGTCACTTAATTTGGGACGGA 57.639 40.909 0.00 0.00 33.84 4.69
792 2443 3.939066 AGTCACTTAATTTGGGACGGAG 58.061 45.455 7.56 0.00 33.84 4.63
793 2444 3.007635 GTCACTTAATTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
794 2445 2.026636 TCACTTAATTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
795 2446 1.283905 ACTTAATTTGGGACGGAGGGG 59.716 52.381 0.00 0.00 0.00 4.79
796 2447 0.626916 TTAATTTGGGACGGAGGGGG 59.373 55.000 0.00 0.00 0.00 5.40
797 2448 0.550638 TAATTTGGGACGGAGGGGGT 60.551 55.000 0.00 0.00 0.00 4.95
798 2449 0.550638 AATTTGGGACGGAGGGGGTA 60.551 55.000 0.00 0.00 0.00 3.69
799 2450 0.986550 ATTTGGGACGGAGGGGGTAG 60.987 60.000 0.00 0.00 0.00 3.18
800 2451 2.405522 TTTGGGACGGAGGGGGTAGT 62.406 60.000 0.00 0.00 0.00 2.73
801 2452 2.040114 GGGACGGAGGGGGTAGTT 59.960 66.667 0.00 0.00 0.00 2.24
802 2453 1.614525 GGGACGGAGGGGGTAGTTT 60.615 63.158 0.00 0.00 0.00 2.66
803 2454 1.620739 GGGACGGAGGGGGTAGTTTC 61.621 65.000 0.00 0.00 0.00 2.78
804 2455 0.616964 GGACGGAGGGGGTAGTTTCT 60.617 60.000 0.00 0.00 0.00 2.52
805 2456 1.342374 GGACGGAGGGGGTAGTTTCTA 60.342 57.143 0.00 0.00 0.00 2.10
816 2467 7.803131 AGGGGGTAGTTTCTACTATCATTTTC 58.197 38.462 6.83 0.00 39.34 2.29
859 2521 1.371389 GGTCTGTGACGTGGACGAC 60.371 63.158 6.12 0.00 43.02 4.34
892 2562 1.107538 TCCCATCGATCTGACCCGTC 61.108 60.000 0.00 0.00 0.00 4.79
951 2636 1.857217 CGCATGTGCATCAGAGAGTAC 59.143 52.381 5.77 0.00 42.21 2.73
952 2637 2.736400 CGCATGTGCATCAGAGAGTACA 60.736 50.000 5.77 0.16 42.21 2.90
953 2638 2.606725 GCATGTGCATCAGAGAGTACAC 59.393 50.000 0.00 0.00 41.59 2.90
954 2639 3.678252 GCATGTGCATCAGAGAGTACACT 60.678 47.826 0.00 0.00 41.59 3.55
955 2640 3.582714 TGTGCATCAGAGAGTACACTG 57.417 47.619 0.00 3.15 36.36 3.66
956 2641 3.157087 TGTGCATCAGAGAGTACACTGA 58.843 45.455 15.78 15.78 44.78 3.41
957 2642 3.192212 TGTGCATCAGAGAGTACACTGAG 59.808 47.826 17.49 12.52 44.17 3.35
958 2643 3.192422 GTGCATCAGAGAGTACACTGAGT 59.808 47.826 17.49 7.91 44.17 3.41
959 2644 4.396478 GTGCATCAGAGAGTACACTGAGTA 59.604 45.833 17.49 9.95 44.17 2.59
960 2645 5.010282 TGCATCAGAGAGTACACTGAGTAA 58.990 41.667 17.49 7.33 44.17 2.24
961 2646 5.654209 TGCATCAGAGAGTACACTGAGTAAT 59.346 40.000 17.49 4.25 44.17 1.89
962 2647 6.828785 TGCATCAGAGAGTACACTGAGTAATA 59.171 38.462 17.49 5.44 44.17 0.98
990 2675 5.443283 TCAGAATCCTGAATCCAAATGGAG 58.557 41.667 8.33 0.00 44.95 3.86
991 2676 4.583489 CAGAATCCTGAATCCAAATGGAGG 59.417 45.833 8.33 3.90 44.52 4.30
992 2677 6.955825 CAGAATCCTGAATCCAAATGGAGGC 61.956 48.000 8.33 3.19 44.52 4.70
997 2682 2.272146 TCCAAATGGAGGCTCGGC 59.728 61.111 8.69 0.00 39.78 5.54
998 2683 3.204827 CCAAATGGAGGCTCGGCG 61.205 66.667 8.69 0.00 37.39 6.46
999 2684 2.436646 CAAATGGAGGCTCGGCGT 60.437 61.111 6.85 0.00 0.00 5.68
1033 2727 2.325583 TTGCTTGTCCTGTTTCTCGT 57.674 45.000 0.00 0.00 0.00 4.18
1131 2854 3.486252 ATACCGCTCGAAGCTCCGC 62.486 63.158 0.00 0.00 39.60 5.54
1212 2935 4.162690 GGCCTCGCTTGATCCCGT 62.163 66.667 0.00 0.00 0.00 5.28
1215 2938 2.107141 CTCGCTTGATCCCGTCCC 59.893 66.667 0.00 0.00 0.00 4.46
1261 2985 4.222114 GAGTCTGAACCTTGCAATTTTCG 58.778 43.478 0.00 3.22 0.00 3.46
1280 3004 1.399089 CGTGTTTTGTTTCGGTCAGGT 59.601 47.619 0.00 0.00 0.00 4.00
1367 3094 4.593864 GCCCTGGATCTCGCGTCC 62.594 72.222 5.77 6.65 36.26 4.79
1397 3124 2.622436 GGGAAGATCGACAAGGAACAG 58.378 52.381 0.00 0.00 0.00 3.16
1468 3203 1.202222 GCGTGATCCATTCCAGCAAAG 60.202 52.381 0.00 0.00 0.00 2.77
1469 3204 1.202222 CGTGATCCATTCCAGCAAAGC 60.202 52.381 0.00 0.00 0.00 3.51
1470 3205 2.097825 GTGATCCATTCCAGCAAAGCT 58.902 47.619 0.00 0.00 40.77 3.74
1471 3206 2.494870 GTGATCCATTCCAGCAAAGCTT 59.505 45.455 0.00 0.00 36.40 3.74
1543 3284 3.418684 AATAAACAAGACACGGGAGCT 57.581 42.857 0.00 0.00 0.00 4.09
1544 3285 2.163818 TAAACAAGACACGGGAGCTG 57.836 50.000 0.00 0.00 0.00 4.24
1566 3307 2.398498 CTGACCCGATGCGATTTCTAG 58.602 52.381 0.00 0.00 0.00 2.43
1567 3308 1.754803 TGACCCGATGCGATTTCTAGT 59.245 47.619 0.00 0.00 0.00 2.57
1568 3309 2.953648 TGACCCGATGCGATTTCTAGTA 59.046 45.455 0.00 0.00 0.00 1.82
1675 3422 1.834540 GAAGGGGGATTGGGGATACT 58.165 55.000 0.00 0.00 0.00 2.12
1705 3452 6.330178 ACCTACTCCAGAATACTGACTAGT 57.670 41.667 0.00 0.00 46.03 2.57
1706 3453 7.448915 ACCTACTCCAGAATACTGACTAGTA 57.551 40.000 0.00 0.00 46.03 1.82
1707 3454 7.511268 ACCTACTCCAGAATACTGACTAGTAG 58.489 42.308 17.20 17.20 46.03 2.57
1708 3455 7.347748 ACCTACTCCAGAATACTGACTAGTAGA 59.652 40.741 21.30 0.00 46.03 2.59
1710 3457 9.431887 CTACTCCAGAATACTGACTAGTAGATC 57.568 40.741 18.21 0.00 46.03 2.75
1711 3458 8.041143 ACTCCAGAATACTGACTAGTAGATCT 57.959 38.462 3.59 0.00 46.03 2.75
1712 3459 8.499406 ACTCCAGAATACTGACTAGTAGATCTT 58.501 37.037 0.00 0.00 46.03 2.40
1714 3461 9.344772 TCCAGAATACTGACTAGTAGATCTTTC 57.655 37.037 0.00 0.00 46.03 2.62
1715 3462 8.573035 CCAGAATACTGACTAGTAGATCTTTCC 58.427 40.741 0.00 0.00 46.03 3.13
1722 3469 7.927629 ACTGACTAGTAGATCTTTCCTAGTACG 59.072 40.741 20.54 17.39 40.02 3.67
1736 3483 1.557099 AGTACGCCAGATCCAACTGA 58.443 50.000 0.00 0.00 39.94 3.41
1748 3495 0.523072 CCAACTGATCCACGCCTTTG 59.477 55.000 0.00 0.00 0.00 2.77
1856 3651 9.566530 TCATATGAAATACAAACATTTTGGTCG 57.433 29.630 1.98 0.00 0.00 4.79
1871 3666 3.444703 TGGTCGAAATTTGGTTGGTTG 57.555 42.857 0.00 0.00 0.00 3.77
1907 3712 4.031061 AGCTGCTCTGCTCTGCTA 57.969 55.556 0.00 0.00 39.34 3.49
1916 3721 3.309410 GCTCTGCTCTGCTATGAGAAAAC 59.691 47.826 6.22 0.00 36.23 2.43
2023 3839 2.340427 CCACACATGGGTTGGACAC 58.660 57.895 0.00 0.00 43.04 3.67
2029 3845 4.079253 ACACATGGGTTGGACACTAATTC 58.921 43.478 0.00 0.00 0.00 2.17
2063 3879 2.592308 GGCTCGGAATTCCTGGCT 59.408 61.111 26.39 0.00 33.73 4.75
2223 4059 1.475280 CAAGGCCTGAACCATGTCATG 59.525 52.381 5.69 5.79 0.00 3.07
2300 4408 3.138304 GTCCTTTCACATGTGCACACTA 58.862 45.455 24.37 4.82 0.00 2.74
2301 4409 3.187227 GTCCTTTCACATGTGCACACTAG 59.813 47.826 24.37 17.35 0.00 2.57
2304 4412 4.319766 CCTTTCACATGTGCACACTAGTTC 60.320 45.833 24.37 0.00 0.00 3.01
2309 4417 3.181455 ACATGTGCACACTAGTTCAAGGA 60.181 43.478 24.37 0.00 0.00 3.36
2375 4502 2.009042 GCCGAGTGTCTTCATTCCCTG 61.009 57.143 0.00 0.00 0.00 4.45
2379 4506 3.193691 CGAGTGTCTTCATTCCCTGTACT 59.806 47.826 0.00 0.00 0.00 2.73
2383 4510 4.452455 GTGTCTTCATTCCCTGTACTGTTG 59.548 45.833 0.00 0.00 0.00 3.33
2559 4690 8.603242 ATTATCTTATACGGGACATGAAACAC 57.397 34.615 0.00 0.00 0.00 3.32
2563 4694 0.181587 ACGGGACATGAAACACCACA 59.818 50.000 0.00 0.00 0.00 4.17
2564 4695 1.202879 ACGGGACATGAAACACCACAT 60.203 47.619 0.00 0.00 0.00 3.21
2565 4696 1.885887 CGGGACATGAAACACCACATT 59.114 47.619 0.00 0.00 0.00 2.71
2627 4775 9.623000 TTCCTACTCAAGTTATTATTTTAGCCC 57.377 33.333 0.00 0.00 0.00 5.19
2852 5008 5.710099 CCTTCTTAGGTTCTGCCATTTACAA 59.290 40.000 0.00 0.00 40.61 2.41
2857 5013 4.273318 AGGTTCTGCCATTTACAATCCTC 58.727 43.478 0.00 0.00 40.61 3.71
2862 5018 7.093945 GGTTCTGCCATTTACAATCCTCTTTTA 60.094 37.037 0.00 0.00 37.17 1.52
2879 5035 8.701895 TCCTCTTTTAATGTTAGATACATCCGT 58.298 33.333 0.00 0.00 46.75 4.69
2932 5088 3.339713 TGGGACGGAGGGAGTATTATT 57.660 47.619 0.00 0.00 0.00 1.40
2937 5093 5.238583 GGACGGAGGGAGTATTATTGAATG 58.761 45.833 0.00 0.00 0.00 2.67
2938 5094 5.228945 ACGGAGGGAGTATTATTGAATGG 57.771 43.478 0.00 0.00 0.00 3.16
2944 5100 7.072263 AGGGAGTATTATTGAATGGAGTCAG 57.928 40.000 0.00 0.00 0.00 3.51
3365 5547 1.000938 CAGCTTGAGTTGAAACCAGGC 60.001 52.381 9.29 9.29 34.68 4.85
3393 5575 9.436957 TGAAGGTCAGTTTTCTTATGAAGATAC 57.563 33.333 0.00 0.00 37.38 2.24
3395 5577 9.793259 AAGGTCAGTTTTCTTATGAAGATACAA 57.207 29.630 0.00 0.00 37.38 2.41
3396 5578 9.965902 AGGTCAGTTTTCTTATGAAGATACAAT 57.034 29.630 0.00 0.00 37.38 2.71
3437 5619 5.183904 TGATTTCCCTTTTTAAGCTGCTCTC 59.816 40.000 1.00 0.00 0.00 3.20
3565 5748 7.078011 AGAGAAATTGCGAGATTTAGGTTTC 57.922 36.000 0.00 0.00 29.75 2.78
3601 5784 9.421399 TCACTCTTTCACCTCTGTTCATATATA 57.579 33.333 0.00 0.00 0.00 0.86
3814 6146 5.289917 TCGTGTACATAGCACCAAAAATG 57.710 39.130 0.00 0.00 33.61 2.32
4265 6601 6.766467 AGTTTAGTACATTATACTTGCAGCCC 59.234 38.462 0.00 0.00 0.00 5.19
4364 6700 2.608623 AGGGGAAAGGTTGTTCAATGG 58.391 47.619 0.00 0.00 0.00 3.16
4395 6731 5.534207 TTTTGGTTGATTCTGCTGTTGAT 57.466 34.783 0.00 0.00 0.00 2.57
4564 7096 7.573283 GCTTACCCACTAGATCACTTTGTTTTC 60.573 40.741 0.00 0.00 0.00 2.29
4576 7108 9.730420 GATCACTTTGTTTTCTGTTTAGCTTTA 57.270 29.630 0.00 0.00 0.00 1.85
4604 7136 1.906574 TGTTATTGTCCTCGGCTCCTT 59.093 47.619 0.00 0.00 0.00 3.36
4608 7140 2.125350 GTCCTCGGCTCCTTGCAG 60.125 66.667 0.00 0.00 45.15 4.41
4727 7260 3.600388 GTGGGATAGGTGTCAGACTTTG 58.400 50.000 1.31 0.00 0.00 2.77
4850 7384 3.627395 TGCTTGTATGTAGTTCCTGGG 57.373 47.619 0.00 0.00 0.00 4.45
5065 7599 6.577103 TGAGGCAACATGTCTTCTCTTATAG 58.423 40.000 17.37 0.00 28.93 1.31
5300 7834 3.525199 AGATGCTGGGTTTGAGGTAAGAT 59.475 43.478 0.00 0.00 0.00 2.40
5315 7849 9.642343 TTGAGGTAAGATATAGCACTTTCTCTA 57.358 33.333 0.00 0.00 32.32 2.43
5678 8220 2.303022 TCTCCGGAGAGCAGATTTTGTT 59.697 45.455 30.49 0.00 40.22 2.83
5707 8281 1.006998 TGCCCATGCACCCTATTTTCT 59.993 47.619 0.00 0.00 44.23 2.52
5708 8282 1.410153 GCCCATGCACCCTATTTTCTG 59.590 52.381 0.00 0.00 37.47 3.02
5720 8589 7.670364 CACCCTATTTTCTGAGTTTCCAAAAT 58.330 34.615 0.00 0.00 33.89 1.82
5782 8651 8.674263 AATGTGCATTTACAAAATTTCTTCCA 57.326 26.923 0.00 0.00 33.69 3.53
5868 8737 2.289072 TGCTGTCAGTGCTACTTTCCTC 60.289 50.000 0.93 0.00 0.00 3.71
5903 8897 6.311735 ACCATGGGTTGACAACTATTTAACT 58.688 36.000 18.09 0.00 27.29 2.24
5910 8904 9.281371 GGGTTGACAACTATTTAACTAGTTCTT 57.719 33.333 12.39 5.88 39.37 2.52
5978 8972 7.194761 TCTTATCATGAGAGGTATCATCCCAT 58.805 38.462 0.09 0.00 37.84 4.00
6033 9027 2.229784 CCATTCAGTTTCACCTCTTGCC 59.770 50.000 0.00 0.00 0.00 4.52
6053 9047 3.682858 GCCGTGACAGCAAAGTTAGATTA 59.317 43.478 0.00 0.00 0.00 1.75
6054 9048 4.435651 GCCGTGACAGCAAAGTTAGATTAC 60.436 45.833 0.00 0.00 0.00 1.89
6322 9316 8.539117 AATTCAGTTCCTAATCCATAAAAGGG 57.461 34.615 0.00 0.00 0.00 3.95
6578 9630 2.668550 GCCGCGGAAGGTCTTGTT 60.669 61.111 33.48 0.00 0.00 2.83
6645 9697 9.912634 TGAAAGAGAAAAAGTATAATTTGCAGG 57.087 29.630 0.00 0.00 0.00 4.85
6678 9730 2.032528 TGCAACTTCAGGAGCCCG 59.967 61.111 0.00 0.00 0.00 6.13
6879 9954 9.645128 ATGATATTTTCCCAGTTCATGTATTCA 57.355 29.630 0.00 0.00 0.00 2.57
6887 9962 5.106157 CCCAGTTCATGTATTCACAAGTTCC 60.106 44.000 0.00 0.00 38.42 3.62
6959 10036 2.524887 TCGACCGGGGAGTTTGGT 60.525 61.111 6.32 0.00 39.12 3.67
7070 10152 0.247894 TGTTGTTTTGTCGTGCGAGC 60.248 50.000 0.00 0.00 0.00 5.03
7075 10157 0.306533 TTTTGTCGTGCGAGCCTTTC 59.693 50.000 0.00 0.00 0.00 2.62
7097 10179 3.435566 GATGCTCGTCGATTAACTGACA 58.564 45.455 0.00 0.00 34.78 3.58
7174 10256 0.893270 TCCCCGTCAAGGTTTGCATG 60.893 55.000 0.00 0.00 38.74 4.06
7224 10306 4.090090 AGCTTGTGTACTGTGTAGGATCT 58.910 43.478 0.00 0.00 0.00 2.75
7233 10315 0.107654 GTGTAGGATCTGGTGGTGCC 60.108 60.000 0.00 0.00 37.90 5.01
7264 10346 5.790593 TGTAACCTAGCAACGAGAATTTCT 58.209 37.500 0.00 0.00 0.00 2.52
7271 10353 5.947228 AGCAACGAGAATTTCTCATGAAA 57.053 34.783 22.75 0.00 43.55 2.69
7281 10363 5.725110 ATTTCTCATGAAAGATCGTTCCG 57.275 39.130 17.19 9.57 44.25 4.30
7296 10378 4.634199 TCGTTCCGAGTACTGGAATTTTT 58.366 39.130 21.85 0.00 46.55 1.94
7311 10393 5.694006 TGGAATTTTTCAAGTATGTTTGCCG 59.306 36.000 0.00 0.00 0.00 5.69
7398 10482 3.184581 CGTTGTGCCTCTACTGAACTTTC 59.815 47.826 0.00 0.00 0.00 2.62
7491 10979 9.745018 TGATGATTCAGATTTAGGAAGAAGTTT 57.255 29.630 0.00 0.00 0.00 2.66
7523 11041 8.628882 AAGTAACAAAGTATCAGTGTTTTTGC 57.371 30.769 0.00 0.00 36.83 3.68
7598 11116 2.171237 TGCATGGTCTCGAGATGGATTT 59.829 45.455 19.90 0.00 0.00 2.17
7636 11156 4.323417 AGAAGATGGTGTGCGTATTTTCA 58.677 39.130 0.00 0.00 0.00 2.69
7643 11163 4.154015 TGGTGTGCGTATTTTCAATCTGAG 59.846 41.667 0.00 0.00 0.00 3.35
7645 11165 3.750652 TGTGCGTATTTTCAATCTGAGCA 59.249 39.130 0.00 0.00 0.00 4.26
7647 11167 3.181507 TGCGTATTTTCAATCTGAGCAGC 60.182 43.478 0.00 0.00 0.00 5.25
7648 11168 3.064545 GCGTATTTTCAATCTGAGCAGCT 59.935 43.478 0.00 0.00 0.00 4.24
7649 11169 4.271049 GCGTATTTTCAATCTGAGCAGCTA 59.729 41.667 0.00 0.00 0.00 3.32
7650 11170 5.049818 GCGTATTTTCAATCTGAGCAGCTAT 60.050 40.000 0.00 0.00 0.00 2.97
7651 11171 6.512415 GCGTATTTTCAATCTGAGCAGCTATT 60.512 38.462 0.00 0.00 0.00 1.73
7652 11172 7.412853 CGTATTTTCAATCTGAGCAGCTATTT 58.587 34.615 0.00 0.00 0.00 1.40
7653 11173 7.375280 CGTATTTTCAATCTGAGCAGCTATTTG 59.625 37.037 0.00 0.00 0.00 2.32
7654 11174 5.571784 TTTCAATCTGAGCAGCTATTTGG 57.428 39.130 0.00 0.00 0.00 3.28
7655 11175 4.492494 TCAATCTGAGCAGCTATTTGGA 57.508 40.909 0.00 0.00 0.00 3.53
7656 11176 5.045012 TCAATCTGAGCAGCTATTTGGAT 57.955 39.130 0.00 0.00 0.00 3.41
7658 11178 6.776744 TCAATCTGAGCAGCTATTTGGATAT 58.223 36.000 0.00 0.00 0.00 1.63
7660 11180 5.813513 TCTGAGCAGCTATTTGGATATGA 57.186 39.130 0.00 0.00 0.00 2.15
7661 11181 6.178607 TCTGAGCAGCTATTTGGATATGAA 57.821 37.500 0.00 0.00 0.00 2.57
7662 11182 6.594744 TCTGAGCAGCTATTTGGATATGAAA 58.405 36.000 0.00 0.00 0.00 2.69
7701 11221 1.665916 CTGTGGCTCGTGTGGACTG 60.666 63.158 0.00 0.00 0.00 3.51
7702 11222 2.369257 CTGTGGCTCGTGTGGACTGT 62.369 60.000 0.00 0.00 0.00 3.55
7703 11223 1.664965 GTGGCTCGTGTGGACTGTC 60.665 63.158 0.00 0.00 0.00 3.51
7705 11225 1.069090 GGCTCGTGTGGACTGTCAA 59.931 57.895 10.38 0.00 0.00 3.18
7712 11232 2.095415 CGTGTGGACTGTCAACGATCTA 60.095 50.000 18.92 0.00 0.00 1.98
7759 11279 4.326504 TGATTCGCTGCTGATCTTATGA 57.673 40.909 11.58 0.00 0.00 2.15
7760 11280 4.891260 TGATTCGCTGCTGATCTTATGAT 58.109 39.130 11.58 0.00 35.26 2.45
7761 11281 4.928020 TGATTCGCTGCTGATCTTATGATC 59.072 41.667 10.87 10.87 46.89 2.92
7770 11290 3.045601 GATCTTATGATCGTGTGGGGG 57.954 52.381 0.00 0.00 39.56 5.40
7771 11291 0.468226 TCTTATGATCGTGTGGGGGC 59.532 55.000 0.00 0.00 0.00 5.80
7772 11292 0.535102 CTTATGATCGTGTGGGGGCC 60.535 60.000 0.00 0.00 0.00 5.80
7773 11293 2.318519 TTATGATCGTGTGGGGGCCG 62.319 60.000 0.00 0.00 0.00 6.13
7786 11306 2.124736 GGCCGCAGCACCATCTTA 60.125 61.111 0.00 0.00 42.56 2.10
7789 11309 2.173669 CCGCAGCACCATCTTACGG 61.174 63.158 0.00 0.00 0.00 4.02
7791 11311 1.421410 CGCAGCACCATCTTACGGAC 61.421 60.000 0.00 0.00 0.00 4.79
7795 11315 0.804933 GCACCATCTTACGGACGGAC 60.805 60.000 0.00 0.00 30.83 4.79
7796 11316 0.179119 CACCATCTTACGGACGGACC 60.179 60.000 0.00 0.00 30.83 4.46
7797 11317 0.324091 ACCATCTTACGGACGGACCT 60.324 55.000 0.00 0.00 36.31 3.85
7798 11318 0.822164 CCATCTTACGGACGGACCTT 59.178 55.000 0.00 0.00 36.31 3.50
7799 11319 2.026641 CCATCTTACGGACGGACCTTA 58.973 52.381 0.00 0.00 36.31 2.69
7800 11320 2.428171 CCATCTTACGGACGGACCTTAA 59.572 50.000 0.00 0.00 36.31 1.85
7801 11321 3.069158 CCATCTTACGGACGGACCTTAAT 59.931 47.826 0.00 0.00 33.06 1.40
7802 11322 4.279169 CCATCTTACGGACGGACCTTAATA 59.721 45.833 0.00 0.00 33.06 0.98
7825 12068 6.824305 ATTGCAGTTTTAGCATGTTAGTCT 57.176 33.333 0.00 0.00 42.33 3.24
7831 12074 7.113544 GCAGTTTTAGCATGTTAGTCTTTTGTC 59.886 37.037 0.00 0.00 0.00 3.18
7838 12081 5.106712 GCATGTTAGTCTTTTGTCGAATGGA 60.107 40.000 0.00 0.00 0.00 3.41
7848 12091 2.125552 CGAATGGAGCGGCTCACA 60.126 61.111 29.33 23.58 31.08 3.58
7884 12149 5.924356 TGTGTGTTTCTTCTGGTGATTCTA 58.076 37.500 0.00 0.00 0.00 2.10
7889 12160 7.388776 TGTGTTTCTTCTGGTGATTCTATTCAG 59.611 37.037 0.00 0.00 0.00 3.02
7897 12168 4.096833 TGGTGATTCTATTCAGCACAATGC 59.903 41.667 2.48 0.00 46.14 3.56
7917 12188 3.127081 CAACTTCTCATGTTGCATCCG 57.873 47.619 0.00 0.00 38.36 4.18
7933 12206 3.619038 GCATCCGGAAAAACTCTCTGTAG 59.381 47.826 9.01 0.00 0.00 2.74
7934 12207 4.822026 CATCCGGAAAAACTCTCTGTAGT 58.178 43.478 9.01 0.00 0.00 2.73
7937 12210 3.988517 CCGGAAAAACTCTCTGTAGTGAC 59.011 47.826 0.00 0.00 0.00 3.67
7952 12225 4.384547 TGTAGTGACGTTTCGTGATCAATG 59.615 41.667 0.00 0.00 41.37 2.82
7957 12230 4.084589 TGACGTTTCGTGATCAATGAACAG 60.085 41.667 10.34 9.82 41.37 3.16
7979 12255 5.048921 CAGCAGCATTCTCTCTCAAGAAAAA 60.049 40.000 0.00 0.00 38.69 1.94
7980 12256 5.181622 AGCAGCATTCTCTCTCAAGAAAAAG 59.818 40.000 0.00 0.00 38.69 2.27
7984 12260 7.804129 CAGCATTCTCTCTCAAGAAAAAGAAAG 59.196 37.037 0.00 0.00 38.69 2.62
8029 12314 9.628500 AATACTAATCTTCCTGTTTGTTATCCC 57.372 33.333 0.00 0.00 0.00 3.85
8031 12316 6.884836 ACTAATCTTCCTGTTTGTTATCCCAC 59.115 38.462 0.00 0.00 0.00 4.61
8050 12348 4.823989 CCCACCAAAACAGATCATCCTATC 59.176 45.833 0.00 0.00 0.00 2.08
8054 12352 6.422100 CACCAAAACAGATCATCCTATCGTAG 59.578 42.308 0.00 0.00 0.00 3.51
8055 12353 6.098409 ACCAAAACAGATCATCCTATCGTAGT 59.902 38.462 0.00 0.00 0.00 2.73
8056 12354 6.422100 CCAAAACAGATCATCCTATCGTAGTG 59.578 42.308 0.00 0.00 0.00 2.74
8057 12355 6.716934 AAACAGATCATCCTATCGTAGTGT 57.283 37.500 0.00 0.00 0.00 3.55
8058 12356 7.818997 AAACAGATCATCCTATCGTAGTGTA 57.181 36.000 0.00 0.00 0.00 2.90
8059 12357 6.804770 ACAGATCATCCTATCGTAGTGTAC 57.195 41.667 0.00 0.00 0.00 2.90
8060 12358 6.535540 ACAGATCATCCTATCGTAGTGTACT 58.464 40.000 0.00 0.00 0.00 2.73
8061 12359 6.651643 ACAGATCATCCTATCGTAGTGTACTC 59.348 42.308 0.00 0.00 0.00 2.59
8062 12360 6.092944 CAGATCATCCTATCGTAGTGTACTCC 59.907 46.154 0.00 0.00 0.00 3.85
8063 12361 4.649692 TCATCCTATCGTAGTGTACTCCC 58.350 47.826 0.00 0.00 0.00 4.30
8064 12362 4.350225 TCATCCTATCGTAGTGTACTCCCT 59.650 45.833 0.00 0.00 0.00 4.20
8065 12363 4.348863 TCCTATCGTAGTGTACTCCCTC 57.651 50.000 0.00 0.00 0.00 4.30
8066 12364 3.972638 TCCTATCGTAGTGTACTCCCTCT 59.027 47.826 0.00 0.00 0.00 3.69
8067 12365 4.066490 CCTATCGTAGTGTACTCCCTCTG 58.934 52.174 0.00 0.00 0.00 3.35
8068 12366 3.648507 ATCGTAGTGTACTCCCTCTGT 57.351 47.619 0.00 0.00 0.00 3.41
8069 12367 3.430042 TCGTAGTGTACTCCCTCTGTT 57.570 47.619 0.00 0.00 0.00 3.16
8070 12368 3.341823 TCGTAGTGTACTCCCTCTGTTC 58.658 50.000 0.00 0.00 0.00 3.18
8071 12369 2.422832 CGTAGTGTACTCCCTCTGTTCC 59.577 54.545 0.00 0.00 0.00 3.62
8072 12370 3.699413 GTAGTGTACTCCCTCTGTTCCT 58.301 50.000 0.00 0.00 0.00 3.36
8074 12372 4.399483 AGTGTACTCCCTCTGTTCCTAA 57.601 45.455 0.00 0.00 0.00 2.69
8075 12373 4.748701 AGTGTACTCCCTCTGTTCCTAAA 58.251 43.478 0.00 0.00 0.00 1.85
8076 12374 5.342866 AGTGTACTCCCTCTGTTCCTAAAT 58.657 41.667 0.00 0.00 0.00 1.40
8077 12375 6.500336 AGTGTACTCCCTCTGTTCCTAAATA 58.500 40.000 0.00 0.00 0.00 1.40
8078 12376 7.133483 AGTGTACTCCCTCTGTTCCTAAATAT 58.867 38.462 0.00 0.00 0.00 1.28
8079 12377 8.287350 AGTGTACTCCCTCTGTTCCTAAATATA 58.713 37.037 0.00 0.00 0.00 0.86
8080 12378 8.921205 GTGTACTCCCTCTGTTCCTAAATATAA 58.079 37.037 0.00 0.00 0.00 0.98
8081 12379 9.144298 TGTACTCCCTCTGTTCCTAAATATAAG 57.856 37.037 0.00 0.00 0.00 1.73
8084 12382 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
8085 12383 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
8086 12384 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
8087 12385 9.907229 CCCTCTGTTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
8117 12415 9.823647 AGATTCCACTTACAAACTACATATGAG 57.176 33.333 10.38 5.24 0.00 2.90
8118 12416 9.817809 GATTCCACTTACAAACTACATATGAGA 57.182 33.333 10.38 0.00 0.00 3.27
8119 12417 8.997621 TTCCACTTACAAACTACATATGAGAC 57.002 34.615 10.38 0.00 0.00 3.36
8120 12418 8.362464 TCCACTTACAAACTACATATGAGACT 57.638 34.615 10.38 0.00 0.00 3.24
8121 12419 9.470399 TCCACTTACAAACTACATATGAGACTA 57.530 33.333 10.38 0.00 0.00 2.59
8156 12454 7.765695 TTTTAGATTCACTCATTTTGCTCCT 57.234 32.000 0.00 0.00 0.00 3.69
8157 12455 8.862325 TTTTAGATTCACTCATTTTGCTCCTA 57.138 30.769 0.00 0.00 0.00 2.94
8158 12456 9.466497 TTTTAGATTCACTCATTTTGCTCCTAT 57.534 29.630 0.00 0.00 0.00 2.57
8159 12457 6.939132 AGATTCACTCATTTTGCTCCTATG 57.061 37.500 0.00 0.00 0.00 2.23
8160 12458 6.421485 AGATTCACTCATTTTGCTCCTATGT 58.579 36.000 0.00 0.00 0.00 2.29
8161 12459 7.568349 AGATTCACTCATTTTGCTCCTATGTA 58.432 34.615 0.00 0.00 0.00 2.29
8162 12460 7.714377 AGATTCACTCATTTTGCTCCTATGTAG 59.286 37.037 0.00 0.00 0.00 2.74
8163 12461 6.299805 TCACTCATTTTGCTCCTATGTAGT 57.700 37.500 0.00 0.00 0.00 2.73
8164 12462 6.341316 TCACTCATTTTGCTCCTATGTAGTC 58.659 40.000 0.00 0.00 0.00 2.59
8165 12463 5.525378 CACTCATTTTGCTCCTATGTAGTCC 59.475 44.000 0.00 0.00 0.00 3.85
8166 12464 5.189736 ACTCATTTTGCTCCTATGTAGTCCA 59.810 40.000 0.00 0.00 0.00 4.02
8167 12465 6.126652 ACTCATTTTGCTCCTATGTAGTCCAT 60.127 38.462 0.00 0.00 37.58 3.41
8168 12466 7.071196 ACTCATTTTGCTCCTATGTAGTCCATA 59.929 37.037 0.00 0.00 34.86 2.74
8180 12478 8.628630 CTATGTAGTCCATAGTGAATCTCTGA 57.371 38.462 0.00 0.00 45.40 3.27
8181 12479 7.904558 ATGTAGTCCATAGTGAATCTCTGAA 57.095 36.000 0.00 0.00 29.82 3.02
8182 12480 7.718334 TGTAGTCCATAGTGAATCTCTGAAA 57.282 36.000 0.00 0.00 0.00 2.69
8183 12481 8.134202 TGTAGTCCATAGTGAATCTCTGAAAA 57.866 34.615 0.00 0.00 0.00 2.29
8184 12482 8.253810 TGTAGTCCATAGTGAATCTCTGAAAAG 58.746 37.037 0.00 0.00 0.00 2.27
8185 12483 7.487822 AGTCCATAGTGAATCTCTGAAAAGA 57.512 36.000 0.00 0.00 0.00 2.52
8186 12484 7.327214 AGTCCATAGTGAATCTCTGAAAAGAC 58.673 38.462 0.00 0.00 0.00 3.01
8187 12485 7.180051 AGTCCATAGTGAATCTCTGAAAAGACT 59.820 37.037 0.00 0.00 0.00 3.24
8188 12486 7.821846 GTCCATAGTGAATCTCTGAAAAGACTT 59.178 37.037 0.00 0.00 0.00 3.01
8189 12487 9.035890 TCCATAGTGAATCTCTGAAAAGACTTA 57.964 33.333 0.00 0.00 0.00 2.24
8190 12488 9.829507 CCATAGTGAATCTCTGAAAAGACTTAT 57.170 33.333 0.00 0.00 0.00 1.73
8202 12500 9.595823 TCTGAAAAGACTTATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
8203 12501 9.595823 CTGAAAAGACTTATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
8216 12514 6.600882 TTAGGAACGGATATAAGATGGTCC 57.399 41.667 0.00 0.00 0.00 4.46
8217 12515 4.753186 AGGAACGGATATAAGATGGTCCT 58.247 43.478 0.00 0.00 0.00 3.85
8218 12516 4.528596 AGGAACGGATATAAGATGGTCCTG 59.471 45.833 0.00 0.00 0.00 3.86
8219 12517 4.283722 GGAACGGATATAAGATGGTCCTGT 59.716 45.833 0.00 0.00 0.00 4.00
8220 12518 5.221661 GGAACGGATATAAGATGGTCCTGTT 60.222 44.000 0.00 0.00 33.49 3.16
8224 12522 7.386851 ACGGATATAAGATGGTCCTGTTTATG 58.613 38.462 0.00 0.00 0.00 1.90
8229 12527 9.730705 ATATAAGATGGTCCTGTTTATGATGTG 57.269 33.333 0.00 0.00 0.00 3.21
8231 12529 6.065976 AGATGGTCCTGTTTATGATGTGAA 57.934 37.500 0.00 0.00 0.00 3.18
8257 12555 7.692908 AAAAAGACGGTCATGTTTGTTTATG 57.307 32.000 11.27 0.00 0.00 1.90
8289 12596 2.356553 TGGATATAACGGCGCGGC 60.357 61.111 24.49 24.49 0.00 6.53
8308 12620 4.811761 GAATCCGCACCGCAACGC 62.812 66.667 0.00 0.00 0.00 4.84
8332 12644 3.201290 CAAATCCTAGAATCTGTGCGCT 58.799 45.455 9.73 0.00 0.00 5.92
8337 12649 2.621055 CCTAGAATCTGTGCGCTAGTCT 59.379 50.000 9.73 8.28 30.81 3.24
8339 12651 4.276183 CCTAGAATCTGTGCGCTAGTCTTA 59.724 45.833 9.73 0.00 30.81 2.10
8341 12653 4.865776 AGAATCTGTGCGCTAGTCTTATC 58.134 43.478 9.73 0.00 0.00 1.75
8344 12656 1.409064 CTGTGCGCTAGTCTTATCCCA 59.591 52.381 9.73 0.00 0.00 4.37
8349 12661 5.054477 GTGCGCTAGTCTTATCCCAAAATA 58.946 41.667 9.73 0.00 0.00 1.40
8356 12668 7.913821 GCTAGTCTTATCCCAAAATAAAAACCG 59.086 37.037 0.00 0.00 0.00 4.44
8365 12677 4.291783 CAAAATAAAAACCGCGAGTTGGA 58.708 39.130 8.23 0.00 39.19 3.53
8370 12682 0.591170 AAACCGCGAGTTGGATGTTG 59.409 50.000 8.23 0.00 39.19 3.33
8372 12684 1.671054 CCGCGAGTTGGATGTTGGT 60.671 57.895 8.23 0.00 0.00 3.67
8373 12685 1.497278 CGCGAGTTGGATGTTGGTG 59.503 57.895 0.00 0.00 0.00 4.17
8374 12686 1.227999 CGCGAGTTGGATGTTGGTGT 61.228 55.000 0.00 0.00 0.00 4.16
8375 12687 1.803334 GCGAGTTGGATGTTGGTGTA 58.197 50.000 0.00 0.00 0.00 2.90
8376 12688 1.732259 GCGAGTTGGATGTTGGTGTAG 59.268 52.381 0.00 0.00 0.00 2.74
8377 12689 2.870435 GCGAGTTGGATGTTGGTGTAGT 60.870 50.000 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
242 243 5.511202 GGGACAATTTTTGAAGGAGCATTCA 60.511 40.000 0.00 0.00 37.41 2.57
361 364 6.486253 TGATGAGCTTCATTGTTGAACTAC 57.514 37.500 0.00 0.00 37.20 2.73
460 463 5.784578 ACAAAAGAAAAACCGGCTAGAAT 57.215 34.783 0.00 0.00 0.00 2.40
468 471 5.121611 AGGCAGAAAAACAAAAGAAAAACCG 59.878 36.000 0.00 0.00 0.00 4.44
475 478 7.977789 AAGAAAAAGGCAGAAAAACAAAAGA 57.022 28.000 0.00 0.00 0.00 2.52
540 1844 2.918934 TCCCAGAGGAAACCATGATTCA 59.081 45.455 11.67 0.00 40.08 2.57
578 1883 1.292085 TAGCCTAAACTTGGACCCCC 58.708 55.000 0.00 0.00 0.00 5.40
682 2333 8.230486 GGAGTATAAGTTTTGGATGCGAATATG 58.770 37.037 0.00 0.00 0.00 1.78
707 2358 2.580783 TCACTTATTTTGGGAGGGAGGG 59.419 50.000 0.00 0.00 0.00 4.30
708 2359 3.267031 AGTCACTTATTTTGGGAGGGAGG 59.733 47.826 0.00 0.00 0.00 4.30
709 2360 4.019321 TGAGTCACTTATTTTGGGAGGGAG 60.019 45.833 0.00 0.00 0.00 4.30
711 2362 4.301072 TGAGTCACTTATTTTGGGAGGG 57.699 45.455 0.00 0.00 0.00 4.30
712 2363 5.316987 AGTTGAGTCACTTATTTTGGGAGG 58.683 41.667 0.00 0.00 0.00 4.30
713 2364 6.347725 CGAAGTTGAGTCACTTATTTTGGGAG 60.348 42.308 0.00 0.00 37.11 4.30
714 2365 5.468746 CGAAGTTGAGTCACTTATTTTGGGA 59.531 40.000 0.00 0.00 37.11 4.37
715 2366 5.238650 ACGAAGTTGAGTCACTTATTTTGGG 59.761 40.000 0.00 0.00 37.78 4.12
716 2367 6.300354 ACGAAGTTGAGTCACTTATTTTGG 57.700 37.500 0.00 0.00 37.78 3.28
717 2368 7.042321 TGGTACGAAGTTGAGTCACTTATTTTG 60.042 37.037 0.00 0.00 37.78 2.44
718 2369 6.987992 TGGTACGAAGTTGAGTCACTTATTTT 59.012 34.615 0.00 0.00 37.78 1.82
719 2370 6.518493 TGGTACGAAGTTGAGTCACTTATTT 58.482 36.000 0.00 0.00 37.78 1.40
720 2371 6.092955 TGGTACGAAGTTGAGTCACTTATT 57.907 37.500 0.00 0.00 37.78 1.40
721 2372 5.717078 TGGTACGAAGTTGAGTCACTTAT 57.283 39.130 0.00 0.00 37.78 1.73
722 2373 5.068198 AGTTGGTACGAAGTTGAGTCACTTA 59.932 40.000 0.00 0.00 37.78 2.24
723 2374 4.117685 GTTGGTACGAAGTTGAGTCACTT 58.882 43.478 0.00 0.00 37.78 3.16
724 2375 3.383825 AGTTGGTACGAAGTTGAGTCACT 59.616 43.478 0.00 0.00 37.78 3.41
725 2376 3.714391 AGTTGGTACGAAGTTGAGTCAC 58.286 45.455 0.00 0.00 37.78 3.67
726 2377 3.243636 GGAGTTGGTACGAAGTTGAGTCA 60.244 47.826 0.00 0.00 37.78 3.41
727 2378 3.315418 GGAGTTGGTACGAAGTTGAGTC 58.685 50.000 0.00 0.00 37.78 3.36
728 2379 2.288030 CGGAGTTGGTACGAAGTTGAGT 60.288 50.000 0.00 0.00 37.78 3.41
729 2380 2.288030 ACGGAGTTGGTACGAAGTTGAG 60.288 50.000 0.00 0.00 31.82 3.02
730 2381 1.682854 ACGGAGTTGGTACGAAGTTGA 59.317 47.619 0.00 0.00 31.82 3.18
731 2382 2.144482 ACGGAGTTGGTACGAAGTTG 57.856 50.000 0.00 0.00 31.82 3.16
732 2383 2.887152 AGTACGGAGTTGGTACGAAGTT 59.113 45.455 0.00 0.00 31.82 2.66
733 2384 2.508526 AGTACGGAGTTGGTACGAAGT 58.491 47.619 0.00 0.00 37.78 3.01
734 2385 4.685169 TTAGTACGGAGTTGGTACGAAG 57.315 45.455 0.00 0.00 37.78 3.79
735 2386 4.518970 ACTTTAGTACGGAGTTGGTACGAA 59.481 41.667 0.00 0.00 37.78 3.85
736 2387 4.072131 ACTTTAGTACGGAGTTGGTACGA 58.928 43.478 0.00 0.00 37.78 3.43
737 2388 4.425577 ACTTTAGTACGGAGTTGGTACG 57.574 45.455 0.00 0.00 37.78 3.67
738 2389 6.914259 ACTAACTTTAGTACGGAGTTGGTAC 58.086 40.000 18.84 0.00 41.37 3.34
763 2414 8.079809 CGTCCCAAATTAAGTGACTTATTTTGT 58.920 33.333 30.48 12.12 41.08 2.83
764 2415 7.540745 CCGTCCCAAATTAAGTGACTTATTTTG 59.459 37.037 28.48 28.48 41.64 2.44
765 2416 7.449086 TCCGTCCCAAATTAAGTGACTTATTTT 59.551 33.333 15.58 15.58 32.98 1.82
766 2417 6.943718 TCCGTCCCAAATTAAGTGACTTATTT 59.056 34.615 5.81 6.30 0.00 1.40
767 2418 6.478129 TCCGTCCCAAATTAAGTGACTTATT 58.522 36.000 5.81 0.00 0.00 1.40
768 2419 6.057321 TCCGTCCCAAATTAAGTGACTTAT 57.943 37.500 5.81 0.00 0.00 1.73
769 2420 5.484715 CTCCGTCCCAAATTAAGTGACTTA 58.515 41.667 0.00 0.00 0.00 2.24
770 2421 4.324267 CTCCGTCCCAAATTAAGTGACTT 58.676 43.478 2.37 2.37 0.00 3.01
771 2422 3.307480 CCTCCGTCCCAAATTAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
772 2423 3.007635 CCTCCGTCCCAAATTAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
773 2424 2.026636 CCCTCCGTCCCAAATTAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
774 2425 2.365582 CCCTCCGTCCCAAATTAAGTG 58.634 52.381 0.00 0.00 0.00 3.16
775 2426 1.283905 CCCCTCCGTCCCAAATTAAGT 59.716 52.381 0.00 0.00 0.00 2.24
776 2427 1.409661 CCCCCTCCGTCCCAAATTAAG 60.410 57.143 0.00 0.00 0.00 1.85
777 2428 0.626916 CCCCCTCCGTCCCAAATTAA 59.373 55.000 0.00 0.00 0.00 1.40
778 2429 0.550638 ACCCCCTCCGTCCCAAATTA 60.551 55.000 0.00 0.00 0.00 1.40
779 2430 0.550638 TACCCCCTCCGTCCCAAATT 60.551 55.000 0.00 0.00 0.00 1.82
780 2431 0.986550 CTACCCCCTCCGTCCCAAAT 60.987 60.000 0.00 0.00 0.00 2.32
781 2432 1.614226 CTACCCCCTCCGTCCCAAA 60.614 63.158 0.00 0.00 0.00 3.28
782 2433 2.039951 CTACCCCCTCCGTCCCAA 59.960 66.667 0.00 0.00 0.00 4.12
783 2434 2.405522 AAACTACCCCCTCCGTCCCA 62.406 60.000 0.00 0.00 0.00 4.37
784 2435 1.614525 AAACTACCCCCTCCGTCCC 60.615 63.158 0.00 0.00 0.00 4.46
785 2436 0.616964 AGAAACTACCCCCTCCGTCC 60.617 60.000 0.00 0.00 0.00 4.79
786 2437 1.753649 GTAGAAACTACCCCCTCCGTC 59.246 57.143 0.00 0.00 0.00 4.79
787 2438 1.360507 AGTAGAAACTACCCCCTCCGT 59.639 52.381 0.00 0.00 32.84 4.69
788 2439 2.156102 AGTAGAAACTACCCCCTCCG 57.844 55.000 0.00 0.00 32.84 4.63
789 2440 4.812653 TGATAGTAGAAACTACCCCCTCC 58.187 47.826 0.00 0.00 40.98 4.30
790 2441 6.997942 AATGATAGTAGAAACTACCCCCTC 57.002 41.667 0.00 0.00 40.98 4.30
791 2442 7.404980 TGAAAATGATAGTAGAAACTACCCCCT 59.595 37.037 0.00 0.00 40.98 4.79
792 2443 7.571025 TGAAAATGATAGTAGAAACTACCCCC 58.429 38.462 0.00 0.00 40.98 5.40
793 2444 9.057089 CATGAAAATGATAGTAGAAACTACCCC 57.943 37.037 0.00 0.00 40.98 4.95
794 2445 9.832445 TCATGAAAATGATAGTAGAAACTACCC 57.168 33.333 0.00 0.00 40.98 3.69
842 2504 1.724929 CGTCGTCCACGTCACAGAC 60.725 63.158 0.00 0.00 44.07 3.51
876 2546 1.008424 CCGACGGGTCAGATCGATG 60.008 63.158 0.54 0.00 38.10 3.84
892 2562 1.000385 TCCTGCAGCATTTTCAAACCG 60.000 47.619 8.66 0.00 0.00 4.44
998 2683 3.064324 AAATGCCAGCCGAGCCAC 61.064 61.111 0.00 0.00 0.00 5.01
999 2684 3.063704 CAAATGCCAGCCGAGCCA 61.064 61.111 0.00 0.00 0.00 4.75
1033 2727 0.179468 GGATTACAAGTAGGCGGCCA 59.821 55.000 23.09 4.27 0.00 5.36
1131 2854 2.760385 GTGTCGGGAGGAGGAGGG 60.760 72.222 0.00 0.00 0.00 4.30
1172 2895 1.271926 CGACCTTGGTGGGGAAGAAAT 60.272 52.381 0.00 0.00 41.11 2.17
1261 2985 2.223409 GGACCTGACCGAAACAAAACAC 60.223 50.000 0.00 0.00 0.00 3.32
1367 3094 4.489771 ATCTTCCCGCCAAGGCCG 62.490 66.667 5.34 0.00 39.21 6.13
1397 3124 2.125832 TCGACCGCGGATTTGACC 60.126 61.111 35.90 10.07 38.28 4.02
1468 3203 5.205565 CCGCGGAATATTAAAAGAAGAAGC 58.794 41.667 24.07 0.00 0.00 3.86
1469 3204 5.205565 GCCGCGGAATATTAAAAGAAGAAG 58.794 41.667 33.48 0.00 0.00 2.85
1470 3205 4.260456 CGCCGCGGAATATTAAAAGAAGAA 60.260 41.667 33.48 0.00 0.00 2.52
1471 3206 3.246699 CGCCGCGGAATATTAAAAGAAGA 59.753 43.478 33.48 0.00 0.00 2.87
1517 3252 6.745907 GCTCCCGTGTCTTGTTTATTTATTTC 59.254 38.462 0.00 0.00 0.00 2.17
1543 3284 2.535485 AAATCGCATCGGGTCAGCCA 62.535 55.000 0.00 0.00 36.17 4.75
1544 3285 1.776034 GAAATCGCATCGGGTCAGCC 61.776 60.000 0.00 0.00 0.00 4.85
1566 3307 2.237392 ACAGGGAGCATGAAGAAGGTAC 59.763 50.000 0.00 0.00 0.00 3.34
1567 3308 2.237143 CACAGGGAGCATGAAGAAGGTA 59.763 50.000 0.00 0.00 0.00 3.08
1568 3309 1.004044 CACAGGGAGCATGAAGAAGGT 59.996 52.381 0.00 0.00 0.00 3.50
1622 3363 1.270358 CCGAAATTCCCTCTCCGATCC 60.270 57.143 0.00 0.00 0.00 3.36
1675 3422 7.555554 GTCAGTATTCTGGAGTAGGTACTAACA 59.444 40.741 0.00 0.00 41.55 2.41
1705 3452 5.045012 TCTGGCGTACTAGGAAAGATCTA 57.955 43.478 0.00 0.00 0.00 1.98
1706 3453 3.899726 TCTGGCGTACTAGGAAAGATCT 58.100 45.455 0.00 0.00 0.00 2.75
1707 3454 4.321378 GGATCTGGCGTACTAGGAAAGATC 60.321 50.000 8.65 8.65 38.43 2.75
1708 3455 3.574826 GGATCTGGCGTACTAGGAAAGAT 59.425 47.826 0.00 0.00 0.00 2.40
1710 3457 2.693591 TGGATCTGGCGTACTAGGAAAG 59.306 50.000 0.00 0.00 0.00 2.62
1711 3458 2.742348 TGGATCTGGCGTACTAGGAAA 58.258 47.619 0.00 0.00 0.00 3.13
1712 3459 2.429610 GTTGGATCTGGCGTACTAGGAA 59.570 50.000 0.00 0.00 0.00 3.36
1714 3461 2.032620 AGTTGGATCTGGCGTACTAGG 58.967 52.381 0.00 0.00 0.00 3.02
1715 3462 2.688446 TCAGTTGGATCTGGCGTACTAG 59.312 50.000 0.00 0.00 36.25 2.57
1748 3495 1.396301 GCAGCACTGAGTGTATTGAGC 59.604 52.381 14.82 5.97 35.75 4.26
1853 3648 3.446310 ACCAACCAACCAAATTTCGAC 57.554 42.857 0.00 0.00 0.00 4.20
1856 3651 5.525745 CCTACAAACCAACCAACCAAATTTC 59.474 40.000 0.00 0.00 0.00 2.17
1871 3666 3.200165 AGCTCCTGGTAATCCTACAAACC 59.800 47.826 0.00 0.00 34.23 3.27
1907 3712 1.072331 ACAGAGCACGGGTTTTCTCAT 59.928 47.619 0.00 0.00 0.00 2.90
1916 3721 1.001406 AGAAGAGAAACAGAGCACGGG 59.999 52.381 0.00 0.00 0.00 5.28
2008 3824 4.335416 AGAATTAGTGTCCAACCCATGTG 58.665 43.478 0.00 0.00 0.00 3.21
2021 3837 3.928992 TCAAGAAGCGCAGAGAATTAGTG 59.071 43.478 11.47 0.00 0.00 2.74
2023 3839 4.025061 CCATCAAGAAGCGCAGAGAATTAG 60.025 45.833 11.47 0.00 0.00 1.73
2029 3845 1.712977 GCCCATCAAGAAGCGCAGAG 61.713 60.000 11.47 0.00 0.00 3.35
2063 3879 8.973182 ACCAAAGACTTAAGTGTTGGAATTTAA 58.027 29.630 34.09 0.00 40.01 1.52
2269 4377 7.230510 TGCACATGTGAAAGGACTAGTTTAATT 59.769 33.333 29.80 0.00 0.00 1.40
2270 4378 6.714810 TGCACATGTGAAAGGACTAGTTTAAT 59.285 34.615 29.80 0.00 0.00 1.40
2278 4386 1.949525 GTGTGCACATGTGAAAGGACT 59.050 47.619 29.80 0.00 0.00 3.85
2300 4408 6.435277 ACAAACATTATGATGCTCCTTGAACT 59.565 34.615 0.00 0.00 36.72 3.01
2301 4409 6.529125 CACAAACATTATGATGCTCCTTGAAC 59.471 38.462 0.00 0.00 36.72 3.18
2304 4412 5.957798 ACACAAACATTATGATGCTCCTTG 58.042 37.500 0.00 0.10 36.72 3.61
2309 4417 5.409214 GGCAAAACACAAACATTATGATGCT 59.591 36.000 0.00 0.00 36.72 3.79
2375 4502 7.323656 GTGAATGAACATAAACAGCAACAGTAC 59.676 37.037 0.00 0.00 0.00 2.73
2379 4506 6.389830 AGTGAATGAACATAAACAGCAACA 57.610 33.333 0.00 0.00 0.00 3.33
2383 4510 6.672147 ACTCAAGTGAATGAACATAAACAGC 58.328 36.000 0.00 0.00 0.00 4.40
2573 4721 6.662865 TCAAATTTACAAAGCCATTCCTCA 57.337 33.333 0.00 0.00 0.00 3.86
2627 4775 6.087159 CCATTCATGACAAAATAATCATCGCG 59.913 38.462 0.00 0.00 33.18 5.87
2777 4925 7.177832 TCATCCGAAATTCCTGACTACTTAA 57.822 36.000 0.00 0.00 0.00 1.85
2932 5088 6.773976 AAAACAAGAAACTGACTCCATTCA 57.226 33.333 0.00 0.00 0.00 2.57
2937 5093 5.102313 CCACAAAAACAAGAAACTGACTCC 58.898 41.667 0.00 0.00 0.00 3.85
2938 5094 5.709966 ACCACAAAAACAAGAAACTGACTC 58.290 37.500 0.00 0.00 0.00 3.36
3255 5437 4.133078 CAAGAGAGATGGGGAATTACAGC 58.867 47.826 0.00 0.00 0.00 4.40
3365 5547 8.327941 TCTTCATAAGAAAACTGACCTTCATG 57.672 34.615 0.00 0.00 33.83 3.07
3395 5577 7.836183 GGGAAATCATTCTGCCATAGGTTATAT 59.164 37.037 0.00 0.00 35.79 0.86
3396 5578 7.018550 AGGGAAATCATTCTGCCATAGGTTATA 59.981 37.037 0.00 0.00 35.79 0.98
3437 5619 5.535043 TTATCATGTTATATGCTGCAGCG 57.465 39.130 32.11 15.41 45.83 5.18
3565 5748 4.823989 AGGTGAAAGAGTGAAACAGGAATG 59.176 41.667 0.00 0.00 41.43 2.67
3601 5784 3.420893 ACCCGAACACATCACAATTCAT 58.579 40.909 0.00 0.00 0.00 2.57
3840 6172 6.127479 TGGCTGATTACCATGATTTAACAACC 60.127 38.462 0.00 0.00 30.29 3.77
4159 6495 9.590451 TTATACATCTTCCTTAGGTTACAAACG 57.410 33.333 0.00 0.00 0.00 3.60
4265 6601 3.242413 CGGTTGCCTGATCAGTTATTTCG 60.242 47.826 21.11 13.02 0.00 3.46
4395 6731 8.132362 ACATTTAACTGAAGTTGTTAATCGCAA 58.868 29.630 5.95 0.00 38.93 4.85
4576 7108 6.357367 AGCCGAGGACAATAACAGATAAAAT 58.643 36.000 0.00 0.00 0.00 1.82
4604 7136 3.207265 TGCCTACAAAAAGAGACTGCA 57.793 42.857 0.00 0.00 0.00 4.41
4633 7165 9.463443 GTAACTGTGAGAAAAGCAAATACAAAT 57.537 29.630 0.00 0.00 0.00 2.32
5065 7599 5.580297 TGCAACAAAAAGGTCAATTCACTTC 59.420 36.000 0.00 0.00 0.00 3.01
5404 7941 5.178252 CAGATCGGATGAAACACCATGATAC 59.822 44.000 0.00 0.00 0.00 2.24
5453 7990 4.403734 TCCTTGTCCCAAATAACCTTCAC 58.596 43.478 0.00 0.00 0.00 3.18
5621 8159 4.582701 ATTTGACTTGATTGTGCGGAAA 57.417 36.364 0.00 0.00 0.00 3.13
5778 8647 7.942341 AGGTCACAAATAGTCATACTTTTGGAA 59.058 33.333 13.86 4.83 34.05 3.53
5782 8651 9.877178 CTCTAGGTCACAAATAGTCATACTTTT 57.123 33.333 0.00 0.00 0.00 2.27
5884 8753 8.843885 AGAACTAGTTAAATAGTTGTCAACCC 57.156 34.615 27.71 14.21 44.16 4.11
5903 8897 5.623956 TCACAAGGAGGTTTGAAGAACTA 57.376 39.130 0.00 0.00 0.00 2.24
5910 8904 5.339200 GGATCCTAATCACAAGGAGGTTTGA 60.339 44.000 3.84 0.00 46.14 2.69
6033 9027 7.576750 TTAGTAATCTAACTTTGCTGTCACG 57.423 36.000 0.00 0.00 32.03 4.35
6053 9047 9.363401 TGTCCATGCTGTATAGTTATAGTTAGT 57.637 33.333 0.00 0.00 0.00 2.24
6054 9048 9.627395 GTGTCCATGCTGTATAGTTATAGTTAG 57.373 37.037 0.00 0.00 0.00 2.34
6070 9064 9.672673 GGAACTATATATATTTGTGTCCATGCT 57.327 33.333 0.00 0.00 0.00 3.79
6240 9234 4.942761 ACATGGACAGCAAATCACTTTT 57.057 36.364 0.00 0.00 0.00 2.27
6322 9316 8.835439 GTCTTATGGAGTAGTTACTACCTGTAC 58.165 40.741 17.78 2.58 37.65 2.90
6354 9348 1.933853 ACAAGATGATCCGTAAAGCGC 59.066 47.619 0.00 0.00 39.71 5.92
6578 9630 5.626142 TGATAAACTTACTTGCCACCTTCA 58.374 37.500 0.00 0.00 0.00 3.02
6631 9683 5.116084 TGAAGCTCCCTGCAAATTATACT 57.884 39.130 0.00 0.00 45.94 2.12
6645 9697 0.243907 TGCACTACGACTGAAGCTCC 59.756 55.000 0.00 0.00 0.00 4.70
6678 9730 3.653835 ACTGGAGGGAATAAAAGGAGC 57.346 47.619 0.00 0.00 0.00 4.70
6807 9882 8.823818 CAAAATTAATAGTACCGGTACCTGAAG 58.176 37.037 35.52 14.96 36.75 3.02
6879 9954 5.916661 AGATACACACGATAGGAACTTGT 57.083 39.130 0.00 0.00 41.75 3.16
6887 9962 5.109210 TGGCTTCAAAGATACACACGATAG 58.891 41.667 0.00 0.00 46.19 2.08
7097 10179 3.004734 GCTTAGCACAATGGTGTCAAACT 59.995 43.478 1.31 0.00 46.95 2.66
7204 10286 4.220821 ACCAGATCCTACACAGTACACAAG 59.779 45.833 0.00 0.00 0.00 3.16
7205 10287 4.021456 CACCAGATCCTACACAGTACACAA 60.021 45.833 0.00 0.00 0.00 3.33
7224 10306 0.681564 ACAAAACTTCGGCACCACCA 60.682 50.000 0.00 0.00 39.03 4.17
7233 10315 4.209703 TCGTTGCTAGGTTACAAAACTTCG 59.790 41.667 0.00 0.00 35.81 3.79
7296 10378 7.908827 TTATTCTTACGGCAAACATACTTGA 57.091 32.000 0.00 0.00 0.00 3.02
7363 10447 1.001378 GCACAACGAGAAATGGCAGTT 60.001 47.619 0.00 0.00 0.00 3.16
7367 10451 0.169009 GAGGCACAACGAGAAATGGC 59.831 55.000 0.00 0.00 37.87 4.40
7441 10777 9.226606 TCAACTATCCAAGTACCAAATTAGTTG 57.773 33.333 19.49 19.49 40.87 3.16
7491 10979 9.826574 ACACTGATACTTTGTTACTTAACTTGA 57.173 29.630 1.04 0.00 37.12 3.02
7500 11018 8.628882 AAGCAAAAACACTGATACTTTGTTAC 57.371 30.769 0.00 0.00 33.10 2.50
7564 11082 7.995289 TCGAGACCATGCAAATTAAAATACAT 58.005 30.769 0.00 0.00 0.00 2.29
7567 11085 7.857734 TCTCGAGACCATGCAAATTAAAATA 57.142 32.000 12.08 0.00 0.00 1.40
7568 11086 6.757897 TCTCGAGACCATGCAAATTAAAAT 57.242 33.333 12.08 0.00 0.00 1.82
7571 11089 4.576053 CCATCTCGAGACCATGCAAATTAA 59.424 41.667 19.30 0.00 0.00 1.40
7572 11090 4.129380 CCATCTCGAGACCATGCAAATTA 58.871 43.478 19.30 0.00 0.00 1.40
7573 11091 2.947652 CCATCTCGAGACCATGCAAATT 59.052 45.455 19.30 0.00 0.00 1.82
7574 11092 2.171237 TCCATCTCGAGACCATGCAAAT 59.829 45.455 19.30 0.00 0.00 2.32
7636 11156 6.776744 TCATATCCAAATAGCTGCTCAGATT 58.223 36.000 4.91 0.00 0.00 2.40
7643 11163 4.522022 AGGCTTTCATATCCAAATAGCTGC 59.478 41.667 0.00 0.00 0.00 5.25
7645 11165 5.075493 CCAGGCTTTCATATCCAAATAGCT 58.925 41.667 0.00 0.00 0.00 3.32
7647 11167 6.966534 AACCAGGCTTTCATATCCAAATAG 57.033 37.500 0.00 0.00 0.00 1.73
7648 11168 7.180051 ACAAAACCAGGCTTTCATATCCAAATA 59.820 33.333 0.00 0.00 0.00 1.40
7649 11169 6.013466 ACAAAACCAGGCTTTCATATCCAAAT 60.013 34.615 0.00 0.00 0.00 2.32
7650 11170 5.306678 ACAAAACCAGGCTTTCATATCCAAA 59.693 36.000 0.00 0.00 0.00 3.28
7651 11171 4.837860 ACAAAACCAGGCTTTCATATCCAA 59.162 37.500 0.00 0.00 0.00 3.53
7652 11172 4.415596 ACAAAACCAGGCTTTCATATCCA 58.584 39.130 0.00 0.00 0.00 3.41
7653 11173 5.405935 AACAAAACCAGGCTTTCATATCC 57.594 39.130 0.00 0.00 0.00 2.59
7654 11174 5.095490 CGAACAAAACCAGGCTTTCATATC 58.905 41.667 0.00 0.00 0.00 1.63
7655 11175 4.764823 TCGAACAAAACCAGGCTTTCATAT 59.235 37.500 0.00 0.00 0.00 1.78
7656 11176 4.138290 TCGAACAAAACCAGGCTTTCATA 58.862 39.130 0.00 0.00 0.00 2.15
7658 11178 2.357637 CTCGAACAAAACCAGGCTTTCA 59.642 45.455 0.00 0.00 0.00 2.69
7660 11180 2.357952 GACTCGAACAAAACCAGGCTTT 59.642 45.455 0.00 0.00 0.00 3.51
7661 11181 1.947456 GACTCGAACAAAACCAGGCTT 59.053 47.619 0.00 0.00 0.00 4.35
7662 11182 1.141053 AGACTCGAACAAAACCAGGCT 59.859 47.619 0.00 0.00 0.00 4.58
7701 11221 4.433615 ACATGGTCACATAGATCGTTGAC 58.566 43.478 0.00 7.48 34.99 3.18
7702 11222 4.402474 AGACATGGTCACATAGATCGTTGA 59.598 41.667 0.00 0.00 34.99 3.18
7703 11223 4.686972 AGACATGGTCACATAGATCGTTG 58.313 43.478 0.00 0.00 34.99 4.10
7705 11225 5.009110 CACTAGACATGGTCACATAGATCGT 59.991 44.000 0.00 0.00 34.99 3.73
7712 11232 3.089284 TCGACACTAGACATGGTCACAT 58.911 45.455 0.00 0.00 37.99 3.21
7769 11289 2.124736 TAAGATGGTGCTGCGGCC 60.125 61.111 16.57 6.24 37.74 6.13
7770 11290 2.813179 CGTAAGATGGTGCTGCGGC 61.813 63.158 11.65 11.65 43.02 6.53
7771 11291 2.173669 CCGTAAGATGGTGCTGCGG 61.174 63.158 0.00 0.00 43.02 5.69
7772 11292 1.153647 TCCGTAAGATGGTGCTGCG 60.154 57.895 0.00 0.00 43.02 5.18
7773 11293 1.421410 CGTCCGTAAGATGGTGCTGC 61.421 60.000 0.00 0.00 43.02 5.25
7774 11294 0.806102 CCGTCCGTAAGATGGTGCTG 60.806 60.000 0.00 0.00 45.49 4.41
7775 11295 1.515954 CCGTCCGTAAGATGGTGCT 59.484 57.895 0.00 0.00 45.49 4.40
7776 11296 4.104143 CCGTCCGTAAGATGGTGC 57.896 61.111 0.00 0.00 45.49 5.01
7780 11300 3.788333 TTAAGGTCCGTCCGTAAGATG 57.212 47.619 0.00 0.00 41.99 2.90
7781 11301 6.453092 CAATATTAAGGTCCGTCCGTAAGAT 58.547 40.000 7.86 6.29 41.35 2.40
7782 11302 5.737063 GCAATATTAAGGTCCGTCCGTAAGA 60.737 44.000 7.86 4.67 41.79 2.10
7783 11303 4.446719 GCAATATTAAGGTCCGTCCGTAAG 59.553 45.833 7.86 0.00 41.79 2.34
7784 11304 4.141981 TGCAATATTAAGGTCCGTCCGTAA 60.142 41.667 5.21 5.21 42.44 3.18
7785 11305 3.384146 TGCAATATTAAGGTCCGTCCGTA 59.616 43.478 0.00 0.00 41.99 4.02
7786 11306 2.168936 TGCAATATTAAGGTCCGTCCGT 59.831 45.455 0.00 0.00 41.99 4.69
7789 11309 5.813080 AAACTGCAATATTAAGGTCCGTC 57.187 39.130 0.00 0.00 0.00 4.79
7791 11311 6.183360 TGCTAAAACTGCAATATTAAGGTCCG 60.183 38.462 0.00 0.00 37.51 4.79
7795 11315 8.931385 AACATGCTAAAACTGCAATATTAAGG 57.069 30.769 0.00 0.00 44.01 2.69
7799 11319 8.960591 AGACTAACATGCTAAAACTGCAATATT 58.039 29.630 0.00 0.00 44.01 1.28
7800 11320 8.511604 AGACTAACATGCTAAAACTGCAATAT 57.488 30.769 0.00 0.00 44.01 1.28
7801 11321 7.921786 AGACTAACATGCTAAAACTGCAATA 57.078 32.000 0.00 0.00 44.01 1.90
7802 11322 6.824305 AGACTAACATGCTAAAACTGCAAT 57.176 33.333 0.00 0.00 44.01 3.56
7822 12065 1.128692 CCGCTCCATTCGACAAAAGAC 59.871 52.381 0.00 0.00 0.00 3.01
7825 12068 0.605319 AGCCGCTCCATTCGACAAAA 60.605 50.000 0.00 0.00 0.00 2.44
7831 12074 0.249447 TATGTGAGCCGCTCCATTCG 60.249 55.000 21.84 0.00 0.00 3.34
7838 12081 0.946221 GCGCTAATATGTGAGCCGCT 60.946 55.000 0.00 0.00 36.20 5.52
7848 12091 6.194796 AGAAACACACAATTGCGCTAATAT 57.805 33.333 9.73 0.00 0.00 1.28
7884 12149 3.570975 TGAGAAGTTGCATTGTGCTGAAT 59.429 39.130 3.41 0.00 45.31 2.57
7889 12160 3.293311 ACATGAGAAGTTGCATTGTGC 57.707 42.857 0.00 0.00 45.29 4.57
7897 12168 2.159476 CCGGATGCAACATGAGAAGTTG 60.159 50.000 0.00 0.00 46.86 3.16
7903 12174 3.057315 AGTTTTTCCGGATGCAACATGAG 60.057 43.478 4.15 0.00 0.00 2.90
7914 12185 3.893200 TCACTACAGAGAGTTTTTCCGGA 59.107 43.478 0.00 0.00 0.00 5.14
7915 12186 3.988517 GTCACTACAGAGAGTTTTTCCGG 59.011 47.826 0.00 0.00 0.00 5.14
7916 12187 3.669122 CGTCACTACAGAGAGTTTTTCCG 59.331 47.826 0.00 0.00 0.00 4.30
7917 12188 4.618965 ACGTCACTACAGAGAGTTTTTCC 58.381 43.478 0.00 0.00 0.00 3.13
7933 12206 4.141680 GTTCATTGATCACGAAACGTCAC 58.858 43.478 8.05 0.00 38.32 3.67
7934 12207 3.804873 TGTTCATTGATCACGAAACGTCA 59.195 39.130 8.05 1.21 38.32 4.35
7937 12210 3.155998 GCTGTTCATTGATCACGAAACG 58.844 45.455 8.05 4.64 0.00 3.60
7952 12225 2.969990 TGAGAGAGAATGCTGCTGTTC 58.030 47.619 0.00 5.76 0.00 3.18
7957 12230 5.180868 TCTTTTTCTTGAGAGAGAATGCTGC 59.819 40.000 0.00 0.00 35.70 5.25
7979 12255 4.527038 TGTTCACCGTTATCCTCTCTTTCT 59.473 41.667 0.00 0.00 0.00 2.52
7980 12256 4.817517 TGTTCACCGTTATCCTCTCTTTC 58.182 43.478 0.00 0.00 0.00 2.62
7984 12260 6.338937 AGTATTTGTTCACCGTTATCCTCTC 58.661 40.000 0.00 0.00 0.00 3.20
8025 12310 3.270433 AGGATGATCTGTTTTGGTGGGAT 59.730 43.478 0.00 0.00 0.00 3.85
8029 12314 5.118990 ACGATAGGATGATCTGTTTTGGTG 58.881 41.667 0.00 0.00 43.77 4.17
8031 12316 6.422100 CACTACGATAGGATGATCTGTTTTGG 59.578 42.308 0.00 0.00 43.77 3.28
8050 12348 2.422832 GGAACAGAGGGAGTACACTACG 59.577 54.545 0.00 0.00 0.00 3.51
8054 12352 5.678955 ATTTAGGAACAGAGGGAGTACAC 57.321 43.478 0.00 0.00 0.00 2.90
8055 12353 9.144298 CTTATATTTAGGAACAGAGGGAGTACA 57.856 37.037 0.00 0.00 0.00 2.90
8056 12354 9.145442 ACTTATATTTAGGAACAGAGGGAGTAC 57.855 37.037 0.00 0.00 0.00 2.73
8057 12355 9.364653 GACTTATATTTAGGAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
8058 12356 8.068733 AGACTTATATTTAGGAACAGAGGGAGT 58.931 37.037 0.00 0.00 0.00 3.85
8059 12357 8.485578 AGACTTATATTTAGGAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
8060 12358 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
8061 12359 9.907229 AAAAGACTTATATTTAGGAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
8091 12389 9.823647 CTCATATGTAGTTTGTAAGTGGAATCT 57.176 33.333 1.90 0.00 0.00 2.40
8092 12390 9.817809 TCTCATATGTAGTTTGTAAGTGGAATC 57.182 33.333 1.90 0.00 0.00 2.52
8093 12391 9.601217 GTCTCATATGTAGTTTGTAAGTGGAAT 57.399 33.333 1.90 0.00 0.00 3.01
8094 12392 8.812972 AGTCTCATATGTAGTTTGTAAGTGGAA 58.187 33.333 1.90 0.00 0.00 3.53
8095 12393 8.362464 AGTCTCATATGTAGTTTGTAAGTGGA 57.638 34.615 1.90 0.00 0.00 4.02
8130 12428 9.466497 AGGAGCAAAATGAGTGAATCTAAAATA 57.534 29.630 0.00 0.00 0.00 1.40
8131 12429 8.358582 AGGAGCAAAATGAGTGAATCTAAAAT 57.641 30.769 0.00 0.00 0.00 1.82
8132 12430 7.765695 AGGAGCAAAATGAGTGAATCTAAAA 57.234 32.000 0.00 0.00 0.00 1.52
8133 12431 8.896744 CATAGGAGCAAAATGAGTGAATCTAAA 58.103 33.333 0.00 0.00 0.00 1.85
8134 12432 8.049117 ACATAGGAGCAAAATGAGTGAATCTAA 58.951 33.333 0.00 0.00 0.00 2.10
8135 12433 7.568349 ACATAGGAGCAAAATGAGTGAATCTA 58.432 34.615 0.00 0.00 0.00 1.98
8136 12434 6.421485 ACATAGGAGCAAAATGAGTGAATCT 58.579 36.000 0.00 0.00 0.00 2.40
8137 12435 6.690194 ACATAGGAGCAAAATGAGTGAATC 57.310 37.500 0.00 0.00 0.00 2.52
8138 12436 7.341805 ACTACATAGGAGCAAAATGAGTGAAT 58.658 34.615 0.00 0.00 0.00 2.57
8139 12437 6.711277 ACTACATAGGAGCAAAATGAGTGAA 58.289 36.000 0.00 0.00 0.00 3.18
8140 12438 6.299805 ACTACATAGGAGCAAAATGAGTGA 57.700 37.500 0.00 0.00 0.00 3.41
8141 12439 5.525378 GGACTACATAGGAGCAAAATGAGTG 59.475 44.000 0.00 0.00 0.00 3.51
8142 12440 5.189736 TGGACTACATAGGAGCAAAATGAGT 59.810 40.000 0.00 0.00 0.00 3.41
8143 12441 5.674525 TGGACTACATAGGAGCAAAATGAG 58.325 41.667 0.00 0.00 0.00 2.90
8144 12442 5.692115 TGGACTACATAGGAGCAAAATGA 57.308 39.130 0.00 0.00 0.00 2.57
8156 12454 8.996651 TTCAGAGATTCACTATGGACTACATA 57.003 34.615 0.00 0.00 41.03 2.29
8157 12455 7.904558 TTCAGAGATTCACTATGGACTACAT 57.095 36.000 0.00 0.00 43.68 2.29
8158 12456 7.718334 TTTCAGAGATTCACTATGGACTACA 57.282 36.000 0.00 0.00 38.26 2.74
8159 12457 8.470805 TCTTTTCAGAGATTCACTATGGACTAC 58.529 37.037 0.00 0.00 38.26 2.73
8160 12458 8.470805 GTCTTTTCAGAGATTCACTATGGACTA 58.529 37.037 0.00 0.00 38.26 2.59
8161 12459 7.180051 AGTCTTTTCAGAGATTCACTATGGACT 59.820 37.037 0.00 0.00 38.26 3.85
8162 12460 7.327214 AGTCTTTTCAGAGATTCACTATGGAC 58.673 38.462 0.00 0.00 38.26 4.02
8163 12461 7.487822 AGTCTTTTCAGAGATTCACTATGGA 57.512 36.000 0.00 0.00 38.26 3.41
8164 12462 9.829507 ATAAGTCTTTTCAGAGATTCACTATGG 57.170 33.333 0.00 0.00 38.26 2.74
8176 12474 9.595823 CCGTTCCTAAATATAAGTCTTTTCAGA 57.404 33.333 0.00 0.00 0.00 3.27
8177 12475 9.595823 TCCGTTCCTAAATATAAGTCTTTTCAG 57.404 33.333 0.00 0.00 0.00 3.02
8190 12488 8.755977 GGACCATCTTATATCCGTTCCTAAATA 58.244 37.037 0.00 0.00 0.00 1.40
8191 12489 7.458170 AGGACCATCTTATATCCGTTCCTAAAT 59.542 37.037 0.00 0.00 36.28 1.40
8192 12490 6.785963 AGGACCATCTTATATCCGTTCCTAAA 59.214 38.462 0.00 0.00 36.28 1.85
8193 12491 6.210784 CAGGACCATCTTATATCCGTTCCTAA 59.789 42.308 0.00 0.00 36.28 2.69
8194 12492 5.715279 CAGGACCATCTTATATCCGTTCCTA 59.285 44.000 0.00 0.00 36.28 2.94
8195 12493 4.528596 CAGGACCATCTTATATCCGTTCCT 59.471 45.833 0.00 0.00 36.28 3.36
8196 12494 4.283722 ACAGGACCATCTTATATCCGTTCC 59.716 45.833 0.00 0.00 36.28 3.62
8197 12495 5.470047 ACAGGACCATCTTATATCCGTTC 57.530 43.478 0.00 0.00 36.28 3.95
8198 12496 5.888982 AACAGGACCATCTTATATCCGTT 57.111 39.130 0.00 0.00 36.28 4.44
8199 12497 5.888982 AAACAGGACCATCTTATATCCGT 57.111 39.130 0.00 0.00 36.28 4.69
8200 12498 7.611770 TCATAAACAGGACCATCTTATATCCG 58.388 38.462 0.00 0.00 36.28 4.18
8201 12499 9.388506 CATCATAAACAGGACCATCTTATATCC 57.611 37.037 0.00 0.00 0.00 2.59
8202 12500 9.950496 ACATCATAAACAGGACCATCTTATATC 57.050 33.333 0.00 0.00 0.00 1.63
8203 12501 9.730705 CACATCATAAACAGGACCATCTTATAT 57.269 33.333 0.00 0.00 0.00 0.86
8204 12502 8.933653 TCACATCATAAACAGGACCATCTTATA 58.066 33.333 0.00 0.00 0.00 0.98
8205 12503 7.805163 TCACATCATAAACAGGACCATCTTAT 58.195 34.615 0.00 0.00 0.00 1.73
8206 12504 7.194112 TCACATCATAAACAGGACCATCTTA 57.806 36.000 0.00 0.00 0.00 2.10
8207 12505 6.065976 TCACATCATAAACAGGACCATCTT 57.934 37.500 0.00 0.00 0.00 2.40
8208 12506 5.698741 TCACATCATAAACAGGACCATCT 57.301 39.130 0.00 0.00 0.00 2.90
8209 12507 6.757897 TTTCACATCATAAACAGGACCATC 57.242 37.500 0.00 0.00 0.00 3.51
8210 12508 7.537596 TTTTTCACATCATAAACAGGACCAT 57.462 32.000 0.00 0.00 0.00 3.55
8211 12509 6.968263 TTTTTCACATCATAAACAGGACCA 57.032 33.333 0.00 0.00 0.00 4.02
8240 12538 6.474819 TGTCTACATAAACAAACATGACCG 57.525 37.500 0.00 0.00 0.00 4.79
8243 12541 6.484977 TGTGCTGTCTACATAAACAAACATGA 59.515 34.615 0.00 0.00 0.00 3.07
8245 12543 6.875948 TGTGCTGTCTACATAAACAAACAT 57.124 33.333 0.00 0.00 0.00 2.71
8247 12545 7.535258 CAGATTGTGCTGTCTACATAAACAAAC 59.465 37.037 8.52 6.96 31.12 2.93
8249 12547 6.149308 CCAGATTGTGCTGTCTACATAAACAA 59.851 38.462 7.44 7.44 34.06 2.83
8250 12548 5.643348 CCAGATTGTGCTGTCTACATAAACA 59.357 40.000 0.00 0.00 34.06 2.83
8251 12549 5.874810 TCCAGATTGTGCTGTCTACATAAAC 59.125 40.000 0.00 0.00 34.06 2.01
8252 12550 6.048732 TCCAGATTGTGCTGTCTACATAAA 57.951 37.500 0.00 0.00 34.06 1.40
8253 12551 5.675684 TCCAGATTGTGCTGTCTACATAA 57.324 39.130 0.00 0.00 34.06 1.90
8254 12552 5.876651 ATCCAGATTGTGCTGTCTACATA 57.123 39.130 0.00 0.00 34.06 2.29
8255 12553 4.767578 ATCCAGATTGTGCTGTCTACAT 57.232 40.909 0.00 0.00 34.06 2.29
8256 12554 5.876651 ATATCCAGATTGTGCTGTCTACA 57.123 39.130 0.00 0.00 34.06 2.74
8257 12555 6.363626 CGTTATATCCAGATTGTGCTGTCTAC 59.636 42.308 0.00 0.00 34.06 2.59
8291 12598 4.811761 GCGTTGCGGTGCGGATTC 62.812 66.667 0.00 0.00 0.00 2.52
8300 12612 1.302383 TAGGATTTGGTGCGTTGCGG 61.302 55.000 0.00 0.00 0.00 5.69
8308 12620 3.310774 CGCACAGATTCTAGGATTTGGTG 59.689 47.826 6.50 6.43 0.00 4.17
8332 12644 7.414319 CGCGGTTTTTATTTTGGGATAAGACTA 60.414 37.037 0.00 0.00 0.00 2.59
8337 12649 5.183522 ACTCGCGGTTTTTATTTTGGGATAA 59.816 36.000 6.13 0.00 0.00 1.75
8339 12651 3.508402 ACTCGCGGTTTTTATTTTGGGAT 59.492 39.130 6.13 0.00 0.00 3.85
8341 12653 3.291809 ACTCGCGGTTTTTATTTTGGG 57.708 42.857 6.13 0.00 0.00 4.12
8344 12656 4.571372 TCCAACTCGCGGTTTTTATTTT 57.429 36.364 6.13 0.00 35.74 1.82
8349 12661 1.314730 ACATCCAACTCGCGGTTTTT 58.685 45.000 6.13 0.00 35.74 1.94
8356 12668 1.732259 CTACACCAACATCCAACTCGC 59.268 52.381 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.