Multiple sequence alignment - TraesCS4D01G336500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G336500 chr4D 100.000 3847 0 0 1 3847 494122305 494118459 0.000000e+00 7105
1 TraesCS4D01G336500 chr4B 95.123 3322 130 16 548 3847 633633018 633629707 0.000000e+00 5208
2 TraesCS4D01G336500 chr4B 92.505 467 20 10 1 464 633633547 633633093 0.000000e+00 654
3 TraesCS4D01G336500 chr4B 95.652 46 2 0 462 507 633633060 633633015 1.480000e-09 75
4 TraesCS4D01G336500 chr5A 93.878 3218 134 20 1 3179 673711713 673708520 0.000000e+00 4793
5 TraesCS4D01G336500 chr5A 92.833 600 33 4 3254 3847 673708476 673707881 0.000000e+00 861
6 TraesCS4D01G336500 chr5A 86.944 337 36 5 46 374 134468452 134468788 4.690000e-99 372
7 TraesCS4D01G336500 chr7A 87.240 337 35 5 46 374 616266860 616267196 1.010000e-100 377
8 TraesCS4D01G336500 chr4A 87.240 337 35 5 46 374 480317052 480317388 1.010000e-100 377
9 TraesCS4D01G336500 chr4A 87.240 337 35 5 46 374 499693480 499693144 1.010000e-100 377
10 TraesCS4D01G336500 chr4A 86.647 337 37 5 46 374 287264949 287265285 2.180000e-97 366
11 TraesCS4D01G336500 chr4A 78.906 256 27 10 2924 3179 228102803 228102575 8.610000e-32 148
12 TraesCS4D01G336500 chr2A 86.944 337 36 5 46 374 198778074 198778410 4.690000e-99 372
13 TraesCS4D01G336500 chr1A 86.647 337 37 5 46 374 467435698 467436034 2.180000e-97 366
14 TraesCS4D01G336500 chr6B 87.023 131 9 5 2924 3054 430909455 430909333 1.440000e-29 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G336500 chr4D 494118459 494122305 3846 True 7105 7105 100.000000 1 3847 1 chr4D.!!$R1 3846
1 TraesCS4D01G336500 chr4B 633629707 633633547 3840 True 1979 5208 94.426667 1 3847 3 chr4B.!!$R1 3846
2 TraesCS4D01G336500 chr5A 673707881 673711713 3832 True 2827 4793 93.355500 1 3847 2 chr5A.!!$R1 3846

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
515 557 0.463204 TGGCCAACACAAACACATGG 59.537 50.0 0.61 0.0 0.00 3.66 F
516 558 0.463620 GGCCAACACAAACACATGGT 59.536 50.0 0.00 0.0 33.63 3.55 F
1684 1766 1.188219 TCAGCCTGGTCTGTCCTCAC 61.188 60.0 14.79 0.0 35.63 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1684 1766 1.213678 AGATGATGATGGTGGTGGGTG 59.786 52.381 0.00 0.0 0.00 4.61 R
1773 1855 1.436195 CGGTGTACATCGCCATTGGG 61.436 60.000 16.71 0.0 46.24 4.12 R
3660 3771 0.032678 CGAATCTGCTCGGCCTGTAT 59.967 55.000 0.00 0.0 35.14 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 99 6.148315 TGTTCTTGCTTGTACATCAATCTCTG 59.852 38.462 10.33 1.76 35.35 3.35
120 122 4.149396 GCTTCAAGTGCTGCATTTACTTTG 59.851 41.667 10.15 6.80 32.69 2.77
121 123 4.916983 TCAAGTGCTGCATTTACTTTGT 57.083 36.364 10.15 0.00 32.69 2.83
122 124 5.261209 TCAAGTGCTGCATTTACTTTGTT 57.739 34.783 10.15 0.00 32.69 2.83
123 125 5.280945 TCAAGTGCTGCATTTACTTTGTTC 58.719 37.500 10.15 0.00 32.69 3.18
124 126 4.243007 AGTGCTGCATTTACTTTGTTCC 57.757 40.909 5.27 0.00 0.00 3.62
125 127 3.891366 AGTGCTGCATTTACTTTGTTCCT 59.109 39.130 5.27 0.00 0.00 3.36
132 134 6.058833 TGCATTTACTTTGTTCCTACAGTCA 58.941 36.000 0.00 0.00 35.28 3.41
133 135 6.544197 TGCATTTACTTTGTTCCTACAGTCAA 59.456 34.615 0.00 0.00 35.28 3.18
140 142 1.737793 GTTCCTACAGTCAAATGCCCG 59.262 52.381 0.00 0.00 0.00 6.13
152 154 1.033746 AATGCCCGATGCTTCAGTGG 61.034 55.000 0.08 0.00 42.00 4.00
153 155 3.512516 GCCCGATGCTTCAGTGGC 61.513 66.667 8.43 8.43 36.87 5.01
201 203 8.331740 TCCACTTGGTAGTAGTACAGTTAGTAT 58.668 37.037 9.89 0.00 34.03 2.12
202 204 8.964772 CCACTTGGTAGTAGTACAGTTAGTATT 58.035 37.037 9.89 0.00 31.84 1.89
284 286 3.808174 GGTACCGTTTTCATGGATAGAGC 59.192 47.826 0.00 0.00 32.58 4.09
318 320 6.475727 CGATCTTACGGAGAGAAAGCATTAAA 59.524 38.462 0.00 0.00 37.93 1.52
337 339 2.955342 ATTTTTGCCCAATTGGTGCT 57.045 40.000 27.53 12.55 36.04 4.40
466 508 1.266989 GGCAGTTTGTGTGTAAGCCTC 59.733 52.381 0.00 0.00 37.67 4.70
503 545 5.812127 GGATGTTTCATAGAAAATGGCCAAC 59.188 40.000 10.96 0.00 0.00 3.77
504 546 5.798125 TGTTTCATAGAAAATGGCCAACA 57.202 34.783 10.96 1.04 0.00 3.33
505 547 5.537188 TGTTTCATAGAAAATGGCCAACAC 58.463 37.500 10.96 1.51 0.00 3.32
506 548 5.069648 TGTTTCATAGAAAATGGCCAACACA 59.930 36.000 10.96 0.00 0.00 3.72
507 549 5.798125 TTCATAGAAAATGGCCAACACAA 57.202 34.783 10.96 0.00 0.00 3.33
508 550 5.798125 TCATAGAAAATGGCCAACACAAA 57.202 34.783 10.96 0.00 0.00 2.83
509 551 5.537188 TCATAGAAAATGGCCAACACAAAC 58.463 37.500 10.96 0.00 0.00 2.93
510 552 3.902881 AGAAAATGGCCAACACAAACA 57.097 38.095 10.96 0.00 0.00 2.83
511 553 3.530535 AGAAAATGGCCAACACAAACAC 58.469 40.909 10.96 0.00 0.00 3.32
512 554 3.055530 AGAAAATGGCCAACACAAACACA 60.056 39.130 10.96 0.00 0.00 3.72
513 555 3.557228 AAATGGCCAACACAAACACAT 57.443 38.095 10.96 0.00 0.00 3.21
514 556 2.529780 ATGGCCAACACAAACACATG 57.470 45.000 10.96 0.00 0.00 3.21
515 557 0.463204 TGGCCAACACAAACACATGG 59.537 50.000 0.61 0.00 0.00 3.66
516 558 0.463620 GGCCAACACAAACACATGGT 59.536 50.000 0.00 0.00 33.63 3.55
517 559 1.537990 GGCCAACACAAACACATGGTC 60.538 52.381 0.00 0.00 33.63 4.02
518 560 1.408702 GCCAACACAAACACATGGTCT 59.591 47.619 0.00 0.00 33.63 3.85
519 561 2.159114 GCCAACACAAACACATGGTCTT 60.159 45.455 0.00 0.00 33.63 3.01
520 562 3.705604 CCAACACAAACACATGGTCTTC 58.294 45.455 0.00 0.00 0.00 2.87
521 563 3.381272 CCAACACAAACACATGGTCTTCT 59.619 43.478 0.00 0.00 0.00 2.85
522 564 4.498009 CCAACACAAACACATGGTCTTCTC 60.498 45.833 0.00 0.00 0.00 2.87
523 565 4.156455 ACACAAACACATGGTCTTCTCT 57.844 40.909 0.00 0.00 0.00 3.10
524 566 4.130118 ACACAAACACATGGTCTTCTCTC 58.870 43.478 0.00 0.00 0.00 3.20
525 567 4.141620 ACACAAACACATGGTCTTCTCTCT 60.142 41.667 0.00 0.00 0.00 3.10
526 568 4.818546 CACAAACACATGGTCTTCTCTCTT 59.181 41.667 0.00 0.00 0.00 2.85
527 569 5.049818 CACAAACACATGGTCTTCTCTCTTC 60.050 44.000 0.00 0.00 0.00 2.87
528 570 5.163258 ACAAACACATGGTCTTCTCTCTTCT 60.163 40.000 0.00 0.00 0.00 2.85
529 571 5.559148 AACACATGGTCTTCTCTCTTCTT 57.441 39.130 0.00 0.00 0.00 2.52
530 572 5.146010 ACACATGGTCTTCTCTCTTCTTC 57.854 43.478 0.00 0.00 0.00 2.87
531 573 4.837860 ACACATGGTCTTCTCTCTTCTTCT 59.162 41.667 0.00 0.00 0.00 2.85
532 574 5.306678 ACACATGGTCTTCTCTCTTCTTCTT 59.693 40.000 0.00 0.00 0.00 2.52
533 575 6.183361 ACACATGGTCTTCTCTCTTCTTCTTT 60.183 38.462 0.00 0.00 0.00 2.52
534 576 6.709846 CACATGGTCTTCTCTCTTCTTCTTTT 59.290 38.462 0.00 0.00 0.00 2.27
535 577 7.228308 CACATGGTCTTCTCTCTTCTTCTTTTT 59.772 37.037 0.00 0.00 0.00 1.94
1011 1093 1.734137 GGCGAAGATGGAGCTCGTA 59.266 57.895 7.83 0.00 0.00 3.43
1026 1108 4.962155 AGCTCGTATATTTGGAAAGGAGG 58.038 43.478 0.00 0.00 0.00 4.30
1029 1111 5.236695 GCTCGTATATTTGGAAAGGAGGAAC 59.763 44.000 0.00 0.00 0.00 3.62
1113 1195 2.730094 CTGCCAGTTGTTGCACCC 59.270 61.111 0.00 0.00 33.17 4.61
1581 1663 4.833495 TCCCCCGGGGCATCATCA 62.833 66.667 36.20 7.82 43.94 3.07
1641 1723 4.314440 ACGGCGCCTTCTTGCTCA 62.314 61.111 26.68 0.00 0.00 4.26
1684 1766 1.188219 TCAGCCTGGTCTGTCCTCAC 61.188 60.000 14.79 0.00 35.63 3.51
1791 1873 0.393808 ACCCAATGGCGATGTACACC 60.394 55.000 0.00 0.00 33.59 4.16
1975 2060 2.266055 GCTCAGACGGGTCAAGGG 59.734 66.667 1.17 0.00 0.00 3.95
2388 2473 7.134362 TCATTCAGAGAGCAGGAATAAGAAT 57.866 36.000 0.00 0.00 30.53 2.40
2424 2509 1.299648 CGCCATTGTCCCAAGAGGA 59.700 57.895 3.30 0.00 44.91 3.71
2451 2536 3.804193 GGCGCGGCTTCCAAGAAG 61.804 66.667 27.05 0.00 0.00 2.85
2586 2674 2.046892 CCTGAGGACGGTGCCAAG 60.047 66.667 0.00 0.00 0.00 3.61
2632 2722 4.778534 AGCACAATTCAGACAGGATTTG 57.221 40.909 0.00 0.00 35.40 2.32
2653 2743 0.944386 TGTTTCAGAAGAAGCGGCAC 59.056 50.000 1.45 0.00 37.74 5.01
2672 2763 3.670627 GCACATTGTTCATCTCCGTTTCC 60.671 47.826 0.00 0.00 0.00 3.13
2676 2767 2.985896 TGTTCATCTCCGTTTCCATCC 58.014 47.619 0.00 0.00 0.00 3.51
2681 2772 4.599041 TCATCTCCGTTTCCATCCAATTT 58.401 39.130 0.00 0.00 0.00 1.82
2850 2941 1.286553 TCCACCCAAAACTGTGAACCT 59.713 47.619 0.00 0.00 0.00 3.50
2915 3006 8.127150 TGTTGACTTTATCTTGAGAGAGATGA 57.873 34.615 0.00 0.00 37.01 2.92
3198 3303 5.921976 TGCTGCTCAAAACTAAAATCATGTG 59.078 36.000 0.00 0.00 0.00 3.21
3199 3304 5.164022 GCTGCTCAAAACTAAAATCATGTGC 60.164 40.000 0.00 0.00 0.00 4.57
3234 3339 1.357690 CATACGGCGGCGACTTCTA 59.642 57.895 38.93 19.63 0.00 2.10
3246 3351 6.183360 GGCGGCGACTTCTATATAATAACAAC 60.183 42.308 12.98 0.00 0.00 3.32
3294 3399 6.094742 CCCAATAAAACAAAATTATGGTGGCC 59.905 38.462 0.00 0.00 0.00 5.36
3340 3445 4.669318 ACACGGTTTACAGATACTCATCG 58.331 43.478 0.00 0.00 36.20 3.84
3347 3452 6.700081 GGTTTACAGATACTCATCGCATGTAA 59.300 38.462 0.00 0.00 36.20 2.41
3466 3571 9.878737 ATCTGAGGAGAAAATATGGATCAAAAT 57.121 29.630 0.00 0.00 0.00 1.82
3569 3674 3.982829 GTTCTTCAGGAACGGGGC 58.017 61.111 0.00 0.00 43.75 5.80
3642 3753 0.885596 CCGCTTGTTCCGGTAACCAA 60.886 55.000 0.00 0.00 40.84 3.67
3660 3771 0.602638 AACTTGATTCGGTGAGCGCA 60.603 50.000 11.47 0.00 0.00 6.09
3678 3789 1.506493 CATACAGGCCGAGCAGATTC 58.494 55.000 0.00 0.00 0.00 2.52
3687 3798 1.328439 CGAGCAGATTCGCGTATACC 58.672 55.000 5.77 0.00 36.85 2.73
3750 3861 1.001633 TCGGTTTTCCCCTCTTTCTCG 59.998 52.381 0.00 0.00 36.42 4.04
3819 3930 0.304705 AGTTCTGCAACAACGCTTCG 59.695 50.000 3.20 0.00 34.60 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 99 3.565905 AGTAAATGCAGCACTTGAAGC 57.434 42.857 0.00 0.00 0.00 3.86
120 122 1.737793 CGGGCATTTGACTGTAGGAAC 59.262 52.381 0.00 0.00 0.00 3.62
121 123 1.626321 TCGGGCATTTGACTGTAGGAA 59.374 47.619 0.00 0.00 0.00 3.36
122 124 1.271856 TCGGGCATTTGACTGTAGGA 58.728 50.000 0.00 0.00 0.00 2.94
123 125 1.942657 CATCGGGCATTTGACTGTAGG 59.057 52.381 0.00 0.00 0.00 3.18
124 126 1.331756 GCATCGGGCATTTGACTGTAG 59.668 52.381 0.00 0.00 43.97 2.74
125 127 1.378531 GCATCGGGCATTTGACTGTA 58.621 50.000 0.00 0.00 43.97 2.74
140 142 1.239296 TGCACTGCCACTGAAGCATC 61.239 55.000 0.00 0.00 40.04 3.91
152 154 2.424601 TCCATTGCTTAGAATGCACTGC 59.575 45.455 0.00 0.00 40.40 4.40
153 155 3.693085 AGTCCATTGCTTAGAATGCACTG 59.307 43.478 0.00 0.00 33.82 3.66
318 320 2.506444 CAGCACCAATTGGGCAAAAAT 58.494 42.857 28.57 13.01 42.05 1.82
337 339 1.278985 CCCACAAGTACCATCTCAGCA 59.721 52.381 0.00 0.00 0.00 4.41
466 508 6.845758 ATGAAACATCCTATGCCCAATATG 57.154 37.500 0.00 0.00 0.00 1.78
503 545 4.384056 AGAGAGAAGACCATGTGTTTGTG 58.616 43.478 0.00 0.00 0.00 3.33
504 546 4.696479 AGAGAGAAGACCATGTGTTTGT 57.304 40.909 0.00 0.00 0.00 2.83
505 547 5.303971 AGAAGAGAGAAGACCATGTGTTTG 58.696 41.667 0.00 0.00 0.00 2.93
506 548 5.559148 AGAAGAGAGAAGACCATGTGTTT 57.441 39.130 0.00 0.00 0.00 2.83
507 549 5.306678 AGAAGAAGAGAGAAGACCATGTGTT 59.693 40.000 0.00 0.00 0.00 3.32
508 550 4.837860 AGAAGAAGAGAGAAGACCATGTGT 59.162 41.667 0.00 0.00 0.00 3.72
509 551 5.404466 AGAAGAAGAGAGAAGACCATGTG 57.596 43.478 0.00 0.00 0.00 3.21
510 552 6.432403 AAAGAAGAAGAGAGAAGACCATGT 57.568 37.500 0.00 0.00 0.00 3.21
511 553 7.742556 AAAAAGAAGAAGAGAGAAGACCATG 57.257 36.000 0.00 0.00 0.00 3.66
539 581 3.706594 GGAGAGGTCCATGTGAGTTATCA 59.293 47.826 0.00 0.00 43.31 2.15
540 582 3.964031 AGGAGAGGTCCATGTGAGTTATC 59.036 47.826 0.00 0.00 46.80 1.75
541 583 3.708631 CAGGAGAGGTCCATGTGAGTTAT 59.291 47.826 0.00 0.00 46.80 1.89
542 584 3.099905 CAGGAGAGGTCCATGTGAGTTA 58.900 50.000 0.00 0.00 46.80 2.24
543 585 1.905215 CAGGAGAGGTCCATGTGAGTT 59.095 52.381 0.00 0.00 46.80 3.01
544 586 1.566211 CAGGAGAGGTCCATGTGAGT 58.434 55.000 0.00 0.00 46.80 3.41
545 587 0.829333 CCAGGAGAGGTCCATGTGAG 59.171 60.000 0.00 0.00 46.80 3.51
546 588 1.267574 GCCAGGAGAGGTCCATGTGA 61.268 60.000 0.00 0.00 46.80 3.58
1011 1093 4.855298 TCCGTTCCTCCTTTCCAAATAT 57.145 40.909 0.00 0.00 0.00 1.28
1026 1108 2.580326 TCGCCGCGTAATCCGTTC 60.580 61.111 13.39 0.00 39.32 3.95
1029 1111 3.320078 CTGTCGCCGCGTAATCCG 61.320 66.667 13.39 0.00 40.40 4.18
1113 1195 1.470632 GCCAGATCAGACTGAACCTCG 60.471 57.143 9.70 4.12 39.94 4.63
1192 1274 0.609957 CATGGTGACCTGTGGCATGT 60.610 55.000 2.11 0.00 0.00 3.21
1263 1345 5.759273 CAGGAACTCCAAGATCATCATCTTC 59.241 44.000 0.00 0.00 41.94 2.87
1581 1663 2.126424 GCGCTTCTCTTCGACGGT 60.126 61.111 0.00 0.00 0.00 4.83
1641 1723 2.267006 CTCAGACATGCCGTGCCT 59.733 61.111 0.00 0.00 0.00 4.75
1684 1766 1.213678 AGATGATGATGGTGGTGGGTG 59.786 52.381 0.00 0.00 0.00 4.61
1773 1855 1.436195 CGGTGTACATCGCCATTGGG 61.436 60.000 16.71 0.00 46.24 4.12
1791 1873 3.741476 GGCTTGACAGGGCTTGCG 61.741 66.667 3.66 0.00 0.00 4.85
1975 2060 2.158957 TGACAAACTCAGTCTCCACACC 60.159 50.000 0.00 0.00 36.94 4.16
2211 2296 2.032528 CCTGTCGCCTTTCCAGCA 59.967 61.111 0.00 0.00 0.00 4.41
2438 2523 3.127533 CGCCCTTCTTGGAAGCCG 61.128 66.667 2.11 3.77 38.35 5.52
2586 2674 2.048127 GGTGACAGCTCCACCGAC 60.048 66.667 16.45 0.00 43.80 4.79
2632 2722 1.806542 TGCCGCTTCTTCTGAAACATC 59.193 47.619 0.00 0.00 0.00 3.06
2653 2743 4.201950 GGATGGAAACGGAGATGAACAATG 60.202 45.833 0.00 0.00 0.00 2.82
2672 2763 0.395586 TCGCCCCCTGAAATTGGATG 60.396 55.000 0.00 0.00 0.00 3.51
2676 2767 0.749454 CTCCTCGCCCCCTGAAATTG 60.749 60.000 0.00 0.00 0.00 2.32
2743 2834 1.022735 GGCGTCGAAGTAGAGGATGA 58.977 55.000 0.00 0.00 0.00 2.92
2850 2941 5.588648 CAGTTTCTTCAACCCAACTACAGAA 59.411 40.000 0.00 0.00 35.77 3.02
2915 3006 3.381908 CGAGCTCTAGGACATTTACCTGT 59.618 47.826 12.85 0.00 38.31 4.00
2982 3073 4.434520 GGCTGTGATTCCTACTACAGTTC 58.565 47.826 0.00 0.00 41.84 3.01
3178 3283 8.693542 AATAGCACATGATTTTAGTTTTGAGC 57.306 30.769 0.00 0.00 0.00 4.26
3198 3303 4.151335 CGTATGTTCTGCATCAGGAATAGC 59.849 45.833 0.00 0.00 38.94 2.97
3199 3304 4.687948 CCGTATGTTCTGCATCAGGAATAG 59.312 45.833 0.00 0.00 38.94 1.73
3246 3351 4.379813 GGGTGAAACTGTTGTGCTATGATG 60.380 45.833 0.00 0.00 36.74 3.07
3294 3399 5.591643 TCTTTCTACAGCTAAGTTTTGCG 57.408 39.130 0.00 0.00 34.13 4.85
3340 3445 7.731556 TTTGCAAATTGTTTTTGTTACATGC 57.268 28.000 8.05 0.00 32.45 4.06
3501 3606 2.202824 CGGTCGCATAAGCCGGAA 60.203 61.111 5.05 0.00 41.60 4.30
3569 3674 0.978146 AGACCTGGAGGGGTTCATCG 60.978 60.000 0.00 0.00 40.06 3.84
3642 3753 0.391661 ATGCGCTCACCGAATCAAGT 60.392 50.000 9.73 0.00 40.02 3.16
3660 3771 0.032678 CGAATCTGCTCGGCCTGTAT 59.967 55.000 0.00 0.00 35.14 2.29
3687 3798 1.282248 ACAAGGATGTGTTCGCGTCG 61.282 55.000 5.77 0.00 38.69 5.12
3714 3825 1.735360 CGATTGGATTGGCGGCATT 59.265 52.632 14.32 9.81 0.00 3.56
3750 3861 0.456312 CGTTGACGAGTGGCTACCTC 60.456 60.000 0.00 0.00 43.02 3.85
3819 3930 0.322816 TGGCAACATCAGGGAGAAGC 60.323 55.000 0.00 0.00 46.17 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.