Multiple sequence alignment - TraesCS4D01G331500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G331500 chr4D 100.000 3338 0 0 1 3338 489469899 489466562 0.000000e+00 6165.0
1 TraesCS4D01G331500 chr4D 96.814 1601 47 4 960 2557 489623859 489622260 0.000000e+00 2671.0
2 TraesCS4D01G331500 chr4D 89.286 1456 127 5 990 2443 489628934 489627506 0.000000e+00 1797.0
3 TraesCS4D01G331500 chr4D 88.307 1471 148 7 968 2435 489506582 489508031 0.000000e+00 1742.0
4 TraesCS4D01G331500 chr4D 84.190 778 85 16 1667 2440 489205551 489204808 0.000000e+00 721.0
5 TraesCS4D01G331500 chr4D 92.786 402 29 0 2937 3338 489621790 489621389 1.730000e-162 582.0
6 TraesCS4D01G331500 chr4D 88.855 332 36 1 1328 1659 489222528 489222198 1.110000e-109 407.0
7 TraesCS4D01G331500 chr4D 92.273 220 17 0 742 961 489630103 489629884 2.500000e-81 313.0
8 TraesCS4D01G331500 chr4D 91.748 206 11 5 2543 2743 35722498 35722294 7.050000e-72 281.0
9 TraesCS4D01G331500 chr4D 89.552 201 18 2 535 733 123716187 123716386 5.530000e-63 252.0
10 TraesCS4D01G331500 chr4D 88.172 93 10 1 2987 3078 468474382 468474290 3.520000e-20 110.0
11 TraesCS4D01G331500 chr4D 91.667 60 4 1 2793 2852 489621905 489621847 7.680000e-12 82.4
12 TraesCS4D01G331500 chr4B 93.763 1491 87 4 962 2446 627556171 627554681 0.000000e+00 2233.0
13 TraesCS4D01G331500 chr4B 87.698 1455 122 17 980 2417 627813009 627811595 0.000000e+00 1642.0
14 TraesCS4D01G331500 chr5A 90.388 1030 93 6 1414 2440 671093862 671092836 0.000000e+00 1349.0
15 TraesCS4D01G331500 chr5A 95.229 545 17 4 1 538 632759032 632759574 0.000000e+00 854.0
16 TraesCS4D01G331500 chr5A 94.708 548 19 5 1 540 632756240 632756785 0.000000e+00 843.0
17 TraesCS4D01G331500 chr5A 94.333 547 22 3 1 540 632753449 632753993 0.000000e+00 830.0
18 TraesCS4D01G331500 chr5A 85.651 453 44 4 968 1419 671096922 671096490 1.090000e-124 457.0
19 TraesCS4D01G331500 chr5A 93.103 87 6 0 3231 3317 590289031 590288945 9.720000e-26 128.0
20 TraesCS4D01G331500 chr2D 79.202 1428 221 47 1000 2392 572404246 572405632 0.000000e+00 922.0
21 TraesCS4D01G331500 chr2D 75.545 1423 265 59 1008 2396 14970639 14972012 1.020000e-174 623.0
22 TraesCS4D01G331500 chr2D 75.792 1231 208 61 1192 2380 13509014 13510196 1.050000e-149 540.0
23 TraesCS4D01G331500 chr2D 75.327 1224 223 51 1210 2392 13475846 13474661 6.390000e-142 514.0
24 TraesCS4D01G331500 chr2D 74.853 1189 224 48 1210 2380 640240912 640242043 1.400000e-128 470.0
25 TraesCS4D01G331500 chr2D 93.370 181 9 3 2557 2734 109695973 109696153 7.100000e-67 265.0
26 TraesCS4D01G331500 chr2D 90.863 197 15 3 2549 2743 537187920 537187725 9.190000e-66 261.0
27 TraesCS4D01G331500 chr2A 78.227 1433 226 53 1000 2392 711855885 711857271 0.000000e+00 839.0
28 TraesCS4D01G331500 chr2A 88.172 93 10 1 3224 3316 206115101 206115192 3.520000e-20 110.0
29 TraesCS4D01G331500 chr3A 94.516 547 19 4 1 540 151165768 151165226 0.000000e+00 833.0
30 TraesCS4D01G331500 chr3A 93.761 545 24 5 1 538 151162980 151162439 0.000000e+00 809.0
31 TraesCS4D01G331500 chr3A 85.897 78 9 2 3040 3115 262526504 262526427 7.680000e-12 82.4
32 TraesCS4D01G331500 chr3A 100.000 31 0 0 1010 1040 647206042 647206072 1.290000e-04 58.4
33 TraesCS4D01G331500 chr1B 77.670 1442 228 59 1000 2392 603604425 603605821 0.000000e+00 793.0
34 TraesCS4D01G331500 chr1B 72.370 1350 273 74 1075 2398 513674976 513673701 5.340000e-88 335.0
35 TraesCS4D01G331500 chr1B 73.455 874 204 18 1301 2164 2559603 2558748 1.500000e-78 303.0
36 TraesCS4D01G331500 chr1B 73.227 874 206 18 1301 2164 2620346 2619491 3.260000e-75 292.0
37 TraesCS4D01G331500 chr1B 90.050 201 17 2 535 733 672478919 672479118 1.190000e-64 257.0
38 TraesCS4D01G331500 chr6D 90.676 547 35 6 1 538 323741402 323740863 0.000000e+00 713.0
39 TraesCS4D01G331500 chr6D 92.697 178 12 1 2558 2734 411430102 411429925 4.270000e-64 255.0
40 TraesCS4D01G331500 chr6D 89.796 196 15 4 2553 2743 10733377 10733182 2.570000e-61 246.0
41 TraesCS4D01G331500 chr6D 90.066 151 9 3 32 181 323797074 323796929 1.220000e-44 191.0
42 TraesCS4D01G331500 chr2B 74.908 1363 235 65 1074 2392 24110215 24108916 1.060000e-144 523.0
43 TraesCS4D01G331500 chr2B 90.050 201 17 2 535 733 799247729 799247928 1.190000e-64 257.0
44 TraesCS4D01G331500 chrUn 73.341 874 205 18 1301 2164 323412636 323411781 7.000000e-77 298.0
45 TraesCS4D01G331500 chrUn 90.050 201 17 2 535 733 225928011 225928210 1.190000e-64 257.0
46 TraesCS4D01G331500 chrUn 89.552 201 18 2 535 733 36545621 36545820 5.530000e-63 252.0
47 TraesCS4D01G331500 chrUn 89.552 201 18 2 535 733 229500710 229500909 5.530000e-63 252.0
48 TraesCS4D01G331500 chr7D 93.923 181 10 1 2555 2734 480822606 480822426 4.240000e-69 272.0
49 TraesCS4D01G331500 chr7D 89.552 201 18 2 535 733 203515234 203515433 5.530000e-63 252.0
50 TraesCS4D01G331500 chr3D 93.333 180 8 4 2558 2734 533955514 533955692 2.550000e-66 263.0
51 TraesCS4D01G331500 chr3D 71.635 1107 235 51 1010 2099 511060732 511061776 7.200000e-57 231.0
52 TraesCS4D01G331500 chr3D 90.588 85 8 0 3231 3315 606601204 606601120 2.720000e-21 113.0
53 TraesCS4D01G331500 chr7B 90.050 201 17 2 535 733 644467202 644467401 1.190000e-64 257.0
54 TraesCS4D01G331500 chr1D 90.050 201 17 2 535 733 141313378 141313179 1.190000e-64 257.0
55 TraesCS4D01G331500 chr7A 90.957 188 12 5 2559 2741 701212113 701211926 7.150000e-62 248.0
56 TraesCS4D01G331500 chr7A 92.308 78 6 0 3231 3308 321644170 321644093 9.790000e-21 111.0
57 TraesCS4D01G331500 chr6A 89.447 199 17 4 2546 2741 601232042 601231845 7.150000e-62 248.0
58 TraesCS4D01G331500 chr4A 90.909 88 8 0 3229 3316 640896774 640896687 5.850000e-23 119.0
59 TraesCS4D01G331500 chr4A 85.437 103 13 2 3218 3318 150238543 150238645 4.550000e-19 106.0
60 TraesCS4D01G331500 chr1A 90.805 87 8 0 3229 3315 535487201 535487287 2.100000e-22 117.0
61 TraesCS4D01G331500 chr5D 90.123 81 8 0 3236 3316 431538608 431538688 4.550000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G331500 chr4D 489466562 489469899 3337 True 6165.000000 6165 100.000000 1 3338 1 chr4D.!!$R5 3337
1 TraesCS4D01G331500 chr4D 489506582 489508031 1449 False 1742.000000 1742 88.307000 968 2435 1 chr4D.!!$F2 1467
2 TraesCS4D01G331500 chr4D 489621389 489630103 8714 True 1089.080000 2671 92.565200 742 3338 5 chr4D.!!$R6 2596
3 TraesCS4D01G331500 chr4D 489204808 489205551 743 True 721.000000 721 84.190000 1667 2440 1 chr4D.!!$R3 773
4 TraesCS4D01G331500 chr4B 627554681 627556171 1490 True 2233.000000 2233 93.763000 962 2446 1 chr4B.!!$R1 1484
5 TraesCS4D01G331500 chr4B 627811595 627813009 1414 True 1642.000000 1642 87.698000 980 2417 1 chr4B.!!$R2 1437
6 TraesCS4D01G331500 chr5A 671092836 671096922 4086 True 903.000000 1349 88.019500 968 2440 2 chr5A.!!$R2 1472
7 TraesCS4D01G331500 chr5A 632753449 632759574 6125 False 842.333333 854 94.756667 1 540 3 chr5A.!!$F1 539
8 TraesCS4D01G331500 chr2D 572404246 572405632 1386 False 922.000000 922 79.202000 1000 2392 1 chr2D.!!$F4 1392
9 TraesCS4D01G331500 chr2D 14970639 14972012 1373 False 623.000000 623 75.545000 1008 2396 1 chr2D.!!$F2 1388
10 TraesCS4D01G331500 chr2D 13509014 13510196 1182 False 540.000000 540 75.792000 1192 2380 1 chr2D.!!$F1 1188
11 TraesCS4D01G331500 chr2D 13474661 13475846 1185 True 514.000000 514 75.327000 1210 2392 1 chr2D.!!$R1 1182
12 TraesCS4D01G331500 chr2D 640240912 640242043 1131 False 470.000000 470 74.853000 1210 2380 1 chr2D.!!$F5 1170
13 TraesCS4D01G331500 chr2A 711855885 711857271 1386 False 839.000000 839 78.227000 1000 2392 1 chr2A.!!$F2 1392
14 TraesCS4D01G331500 chr3A 151162439 151165768 3329 True 821.000000 833 94.138500 1 540 2 chr3A.!!$R2 539
15 TraesCS4D01G331500 chr1B 603604425 603605821 1396 False 793.000000 793 77.670000 1000 2392 1 chr1B.!!$F1 1392
16 TraesCS4D01G331500 chr1B 513673701 513674976 1275 True 335.000000 335 72.370000 1075 2398 1 chr1B.!!$R3 1323
17 TraesCS4D01G331500 chr1B 2558748 2559603 855 True 303.000000 303 73.455000 1301 2164 1 chr1B.!!$R1 863
18 TraesCS4D01G331500 chr1B 2619491 2620346 855 True 292.000000 292 73.227000 1301 2164 1 chr1B.!!$R2 863
19 TraesCS4D01G331500 chr6D 323740863 323741402 539 True 713.000000 713 90.676000 1 538 1 chr6D.!!$R2 537
20 TraesCS4D01G331500 chr2B 24108916 24110215 1299 True 523.000000 523 74.908000 1074 2392 1 chr2B.!!$R1 1318
21 TraesCS4D01G331500 chrUn 323411781 323412636 855 True 298.000000 298 73.341000 1301 2164 1 chrUn.!!$R1 863
22 TraesCS4D01G331500 chr3D 511060732 511061776 1044 False 231.000000 231 71.635000 1010 2099 1 chr3D.!!$F1 1089

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
640 648 0.036022 AGAGGACAACAGCAAGCTCC 59.964 55.0 0.0 0.0 0.0 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2532 15026 0.539669 GAAAACACCCCAGGTCCCAG 60.54 60.0 0.0 0.0 31.02 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 2.555547 AAGCAGAACTTGGCCGCAC 61.556 57.895 0.00 0.00 37.17 5.34
79 80 3.176708 GCACGAACATAGCGAGTTTCTA 58.823 45.455 0.00 0.00 0.00 2.10
171 173 4.155462 CACTTACTCGGCTAGACTTGTACA 59.845 45.833 0.00 0.00 0.00 2.90
309 317 4.439700 GGCACGCATCTACTAGTACTGAAA 60.440 45.833 5.39 0.00 0.00 2.69
311 319 5.676584 GCACGCATCTACTAGTACTGAAACT 60.677 44.000 5.39 0.00 0.00 2.66
312 320 6.457934 GCACGCATCTACTAGTACTGAAACTA 60.458 42.308 5.39 0.00 0.00 2.24
408 416 3.991773 CTGTCAAAAATTGGCATGGAGTG 59.008 43.478 0.00 0.00 45.37 3.51
468 476 4.012895 GTGTCAGTTGCGCCGGTG 62.013 66.667 11.67 11.67 0.00 4.94
469 477 4.539083 TGTCAGTTGCGCCGGTGT 62.539 61.111 17.91 0.00 0.00 4.16
470 478 3.712881 GTCAGTTGCGCCGGTGTC 61.713 66.667 17.91 9.64 0.00 3.67
471 479 4.228567 TCAGTTGCGCCGGTGTCA 62.229 61.111 17.91 12.31 0.00 3.58
472 480 3.049674 CAGTTGCGCCGGTGTCAT 61.050 61.111 17.91 0.00 0.00 3.06
473 481 2.281484 AGTTGCGCCGGTGTCATT 60.281 55.556 17.91 4.32 0.00 2.57
474 482 2.175811 GTTGCGCCGGTGTCATTC 59.824 61.111 17.91 7.85 0.00 2.67
475 483 3.418913 TTGCGCCGGTGTCATTCG 61.419 61.111 17.91 3.71 0.00 3.34
480 488 4.444838 CCGGTGTCATTCGCCCGA 62.445 66.667 0.00 0.00 43.26 5.14
481 489 3.186047 CGGTGTCATTCGCCCGAC 61.186 66.667 0.00 0.00 43.26 4.79
482 490 3.186047 GGTGTCATTCGCCCGACG 61.186 66.667 0.00 0.00 45.62 5.12
483 491 3.849953 GTGTCATTCGCCCGACGC 61.850 66.667 0.00 0.00 43.23 5.19
485 493 4.814294 GTCATTCGCCCGACGCCT 62.814 66.667 0.00 0.00 43.23 5.52
486 494 3.142162 TCATTCGCCCGACGCCTA 61.142 61.111 0.00 0.00 43.23 3.93
487 495 2.658593 CATTCGCCCGACGCCTAG 60.659 66.667 0.00 0.00 43.23 3.02
488 496 4.587189 ATTCGCCCGACGCCTAGC 62.587 66.667 0.00 0.00 43.23 3.42
493 501 2.831742 CCCGACGCCTAGCTGGTA 60.832 66.667 0.00 0.00 38.35 3.25
494 502 2.412112 CCGACGCCTAGCTGGTAC 59.588 66.667 0.00 0.00 38.35 3.34
495 503 2.412112 CGACGCCTAGCTGGTACC 59.588 66.667 4.43 4.43 38.35 3.34
496 504 2.412323 CGACGCCTAGCTGGTACCA 61.412 63.158 15.39 15.39 38.35 3.25
497 505 1.141234 GACGCCTAGCTGGTACCAC 59.859 63.158 11.60 8.43 38.35 4.16
498 506 1.601419 GACGCCTAGCTGGTACCACA 61.601 60.000 11.60 0.00 38.35 4.17
499 507 0.976073 ACGCCTAGCTGGTACCACAT 60.976 55.000 11.60 4.82 38.35 3.21
500 508 1.037493 CGCCTAGCTGGTACCACATA 58.963 55.000 11.60 5.83 38.35 2.29
501 509 1.269621 CGCCTAGCTGGTACCACATAC 60.270 57.143 11.60 0.65 38.35 2.39
502 510 2.040178 GCCTAGCTGGTACCACATACT 58.960 52.381 11.60 8.74 38.35 2.12
503 511 2.434702 GCCTAGCTGGTACCACATACTT 59.565 50.000 11.60 0.00 38.35 2.24
504 512 3.118371 GCCTAGCTGGTACCACATACTTT 60.118 47.826 11.60 0.00 38.35 2.66
505 513 4.100498 GCCTAGCTGGTACCACATACTTTA 59.900 45.833 11.60 0.00 38.35 1.85
506 514 5.598769 CCTAGCTGGTACCACATACTTTAC 58.401 45.833 11.60 0.00 33.87 2.01
507 515 5.363005 CCTAGCTGGTACCACATACTTTACT 59.637 44.000 11.60 0.27 33.87 2.24
508 516 6.548622 CCTAGCTGGTACCACATACTTTACTA 59.451 42.308 11.60 1.40 33.87 1.82
509 517 6.218108 AGCTGGTACCACATACTTTACTAC 57.782 41.667 11.60 0.00 33.87 2.73
510 518 5.718130 AGCTGGTACCACATACTTTACTACA 59.282 40.000 11.60 0.00 33.87 2.74
511 519 6.383147 AGCTGGTACCACATACTTTACTACAT 59.617 38.462 11.60 0.00 33.87 2.29
512 520 6.700520 GCTGGTACCACATACTTTACTACATC 59.299 42.308 11.60 0.00 33.87 3.06
513 521 7.632028 GCTGGTACCACATACTTTACTACATCA 60.632 40.741 11.60 0.00 33.87 3.07
514 522 7.549839 TGGTACCACATACTTTACTACATCAC 58.450 38.462 11.60 0.00 33.87 3.06
515 523 6.982724 GGTACCACATACTTTACTACATCACC 59.017 42.308 7.15 0.00 33.87 4.02
516 524 6.614694 ACCACATACTTTACTACATCACCA 57.385 37.500 0.00 0.00 0.00 4.17
517 525 7.011499 ACCACATACTTTACTACATCACCAA 57.989 36.000 0.00 0.00 0.00 3.67
518 526 6.877322 ACCACATACTTTACTACATCACCAAC 59.123 38.462 0.00 0.00 0.00 3.77
519 527 6.315393 CCACATACTTTACTACATCACCAACC 59.685 42.308 0.00 0.00 0.00 3.77
520 528 7.103641 CACATACTTTACTACATCACCAACCT 58.896 38.462 0.00 0.00 0.00 3.50
521 529 7.277981 CACATACTTTACTACATCACCAACCTC 59.722 40.741 0.00 0.00 0.00 3.85
522 530 5.818678 ACTTTACTACATCACCAACCTCA 57.181 39.130 0.00 0.00 0.00 3.86
523 531 6.182507 ACTTTACTACATCACCAACCTCAA 57.817 37.500 0.00 0.00 0.00 3.02
524 532 6.779860 ACTTTACTACATCACCAACCTCAAT 58.220 36.000 0.00 0.00 0.00 2.57
525 533 6.879458 ACTTTACTACATCACCAACCTCAATC 59.121 38.462 0.00 0.00 0.00 2.67
526 534 4.908601 ACTACATCACCAACCTCAATCA 57.091 40.909 0.00 0.00 0.00 2.57
527 535 5.441718 ACTACATCACCAACCTCAATCAT 57.558 39.130 0.00 0.00 0.00 2.45
528 536 5.188434 ACTACATCACCAACCTCAATCATG 58.812 41.667 0.00 0.00 0.00 3.07
529 537 3.359033 ACATCACCAACCTCAATCATGG 58.641 45.455 0.00 0.00 38.91 3.66
530 538 1.838112 TCACCAACCTCAATCATGGC 58.162 50.000 0.00 0.00 36.37 4.40
531 539 0.819582 CACCAACCTCAATCATGGCC 59.180 55.000 0.00 0.00 36.37 5.36
532 540 0.680921 ACCAACCTCAATCATGGCCG 60.681 55.000 0.00 0.00 36.37 6.13
533 541 1.434696 CAACCTCAATCATGGCCGC 59.565 57.895 0.00 0.00 0.00 6.53
534 542 1.001020 AACCTCAATCATGGCCGCA 60.001 52.632 0.00 0.00 0.00 5.69
535 543 0.396139 AACCTCAATCATGGCCGCAT 60.396 50.000 0.00 0.00 0.00 4.73
536 544 0.820891 ACCTCAATCATGGCCGCATC 60.821 55.000 0.00 0.00 0.00 3.91
537 545 0.820482 CCTCAATCATGGCCGCATCA 60.820 55.000 0.00 0.00 0.00 3.07
538 546 1.244816 CTCAATCATGGCCGCATCAT 58.755 50.000 0.00 0.00 0.00 2.45
539 547 1.199327 CTCAATCATGGCCGCATCATC 59.801 52.381 0.00 0.00 0.00 2.92
540 548 1.202842 TCAATCATGGCCGCATCATCT 60.203 47.619 0.00 0.00 0.00 2.90
541 549 1.068541 CAATCATGGCCGCATCATCTG 60.069 52.381 0.00 0.00 0.00 2.90
542 550 0.608308 ATCATGGCCGCATCATCTGG 60.608 55.000 0.00 0.00 0.00 3.86
543 551 2.114625 ATGGCCGCATCATCTGGG 59.885 61.111 0.00 0.00 37.54 4.45
544 552 2.454688 ATGGCCGCATCATCTGGGA 61.455 57.895 0.00 0.00 40.13 4.37
545 553 1.786407 ATGGCCGCATCATCTGGGAT 61.786 55.000 0.00 0.00 40.13 3.85
546 554 1.673665 GGCCGCATCATCTGGGATC 60.674 63.158 0.00 0.00 40.13 3.36
547 555 1.071987 GCCGCATCATCTGGGATCA 59.928 57.895 0.00 0.00 40.13 2.92
548 556 0.535780 GCCGCATCATCTGGGATCAA 60.536 55.000 0.00 0.00 40.13 2.57
549 557 1.885359 GCCGCATCATCTGGGATCAAT 60.885 52.381 0.00 0.00 40.13 2.57
550 558 1.810755 CCGCATCATCTGGGATCAATG 59.189 52.381 0.00 0.00 40.13 2.82
551 559 2.551504 CCGCATCATCTGGGATCAATGA 60.552 50.000 0.00 0.00 40.13 2.57
552 560 3.344515 CGCATCATCTGGGATCAATGAT 58.655 45.455 0.00 0.00 39.99 2.45
553 561 4.510571 CGCATCATCTGGGATCAATGATA 58.489 43.478 0.00 0.00 37.90 2.15
554 562 4.571176 CGCATCATCTGGGATCAATGATAG 59.429 45.833 0.00 0.00 37.90 2.08
555 563 5.498393 GCATCATCTGGGATCAATGATAGT 58.502 41.667 0.00 0.00 37.90 2.12
556 564 5.944599 GCATCATCTGGGATCAATGATAGTT 59.055 40.000 0.00 0.00 37.90 2.24
557 565 6.433404 GCATCATCTGGGATCAATGATAGTTT 59.567 38.462 0.00 0.00 37.90 2.66
558 566 7.609146 GCATCATCTGGGATCAATGATAGTTTA 59.391 37.037 0.00 0.00 37.90 2.01
559 567 9.163899 CATCATCTGGGATCAATGATAGTTTAG 57.836 37.037 0.00 0.00 37.90 1.85
560 568 8.496534 TCATCTGGGATCAATGATAGTTTAGA 57.503 34.615 0.00 0.00 0.00 2.10
561 569 8.937835 TCATCTGGGATCAATGATAGTTTAGAA 58.062 33.333 0.00 0.00 0.00 2.10
562 570 8.997323 CATCTGGGATCAATGATAGTTTAGAAC 58.003 37.037 0.00 0.00 0.00 3.01
563 571 7.509546 TCTGGGATCAATGATAGTTTAGAACC 58.490 38.462 0.00 0.00 0.00 3.62
564 572 7.127186 TCTGGGATCAATGATAGTTTAGAACCA 59.873 37.037 0.00 0.00 0.00 3.67
565 573 7.282585 TGGGATCAATGATAGTTTAGAACCAG 58.717 38.462 0.00 0.00 0.00 4.00
566 574 6.205658 GGGATCAATGATAGTTTAGAACCAGC 59.794 42.308 0.00 0.00 0.00 4.85
567 575 6.767902 GGATCAATGATAGTTTAGAACCAGCA 59.232 38.462 0.00 0.00 0.00 4.41
568 576 7.283127 GGATCAATGATAGTTTAGAACCAGCAA 59.717 37.037 0.00 0.00 0.00 3.91
569 577 7.994425 TCAATGATAGTTTAGAACCAGCAAA 57.006 32.000 0.00 0.00 0.00 3.68
570 578 8.402798 TCAATGATAGTTTAGAACCAGCAAAA 57.597 30.769 0.00 0.00 0.00 2.44
571 579 8.514594 TCAATGATAGTTTAGAACCAGCAAAAG 58.485 33.333 0.00 0.00 0.00 2.27
572 580 6.817765 TGATAGTTTAGAACCAGCAAAAGG 57.182 37.500 0.00 0.00 0.00 3.11
573 581 6.539173 TGATAGTTTAGAACCAGCAAAAGGA 58.461 36.000 0.00 0.00 0.00 3.36
574 582 6.655003 TGATAGTTTAGAACCAGCAAAAGGAG 59.345 38.462 0.00 0.00 0.00 3.69
575 583 4.145052 AGTTTAGAACCAGCAAAAGGAGG 58.855 43.478 0.00 0.00 0.00 4.30
576 584 2.200373 TAGAACCAGCAAAAGGAGGC 57.800 50.000 0.00 0.00 0.00 4.70
577 585 0.480252 AGAACCAGCAAAAGGAGGCT 59.520 50.000 0.00 0.00 42.06 4.58
584 592 1.342496 AGCAAAAGGAGGCTGAAAAGC 59.658 47.619 0.00 0.00 39.30 3.51
592 600 1.502190 GGCTGAAAAGCCGTAGTGC 59.498 57.895 0.12 0.00 45.79 4.40
593 601 0.955919 GGCTGAAAAGCCGTAGTGCT 60.956 55.000 0.12 0.00 45.79 4.40
594 602 1.674817 GGCTGAAAAGCCGTAGTGCTA 60.675 52.381 0.12 0.00 45.79 3.49
595 603 2.073816 GCTGAAAAGCCGTAGTGCTAA 58.926 47.619 0.00 0.00 41.80 3.09
596 604 2.159693 GCTGAAAAGCCGTAGTGCTAAC 60.160 50.000 0.00 0.00 41.80 2.34
597 605 2.063266 TGAAAAGCCGTAGTGCTAACG 58.937 47.619 0.00 0.01 41.80 3.18
598 606 0.794473 AAAAGCCGTAGTGCTAACGC 59.206 50.000 1.29 0.00 41.80 4.84
599 607 0.320073 AAAGCCGTAGTGCTAACGCA 60.320 50.000 1.29 0.00 41.80 5.24
607 615 2.350895 TGCTAACGCATGCCCTGT 59.649 55.556 13.15 0.75 42.25 4.00
608 616 1.599576 TGCTAACGCATGCCCTGTA 59.400 52.632 13.15 0.00 42.25 2.74
609 617 0.461870 TGCTAACGCATGCCCTGTAG 60.462 55.000 13.15 9.36 42.25 2.74
610 618 0.462047 GCTAACGCATGCCCTGTAGT 60.462 55.000 13.15 0.00 35.78 2.73
611 619 2.012051 GCTAACGCATGCCCTGTAGTT 61.012 52.381 13.15 11.57 35.78 2.24
612 620 2.356135 CTAACGCATGCCCTGTAGTTT 58.644 47.619 13.15 0.00 32.70 2.66
613 621 1.616159 AACGCATGCCCTGTAGTTTT 58.384 45.000 13.15 0.00 0.00 2.43
614 622 0.881118 ACGCATGCCCTGTAGTTTTG 59.119 50.000 13.15 0.00 0.00 2.44
615 623 1.164411 CGCATGCCCTGTAGTTTTGA 58.836 50.000 13.15 0.00 0.00 2.69
616 624 1.539388 CGCATGCCCTGTAGTTTTGAA 59.461 47.619 13.15 0.00 0.00 2.69
617 625 2.414559 CGCATGCCCTGTAGTTTTGAAG 60.415 50.000 13.15 0.00 0.00 3.02
618 626 2.672195 GCATGCCCTGTAGTTTTGAAGC 60.672 50.000 6.36 0.00 0.00 3.86
619 627 2.656947 TGCCCTGTAGTTTTGAAGCT 57.343 45.000 0.00 0.00 0.00 3.74
620 628 3.780804 TGCCCTGTAGTTTTGAAGCTA 57.219 42.857 0.00 0.00 0.00 3.32
621 629 4.093472 TGCCCTGTAGTTTTGAAGCTAA 57.907 40.909 0.00 0.00 0.00 3.09
622 630 4.072131 TGCCCTGTAGTTTTGAAGCTAAG 58.928 43.478 0.00 0.00 0.00 2.18
623 631 4.202419 TGCCCTGTAGTTTTGAAGCTAAGA 60.202 41.667 0.00 0.00 0.00 2.10
624 632 4.393371 GCCCTGTAGTTTTGAAGCTAAGAG 59.607 45.833 0.00 0.00 0.00 2.85
625 633 4.938226 CCCTGTAGTTTTGAAGCTAAGAGG 59.062 45.833 0.00 6.83 0.00 3.69
626 634 5.280011 CCCTGTAGTTTTGAAGCTAAGAGGA 60.280 44.000 12.05 0.00 31.00 3.71
627 635 5.639931 CCTGTAGTTTTGAAGCTAAGAGGAC 59.360 44.000 0.00 0.00 31.00 3.85
628 636 6.169557 TGTAGTTTTGAAGCTAAGAGGACA 57.830 37.500 0.00 0.00 0.00 4.02
629 637 6.588204 TGTAGTTTTGAAGCTAAGAGGACAA 58.412 36.000 0.00 0.00 0.00 3.18
630 638 6.482308 TGTAGTTTTGAAGCTAAGAGGACAAC 59.518 38.462 0.00 0.00 0.00 3.32
631 639 5.437060 AGTTTTGAAGCTAAGAGGACAACA 58.563 37.500 0.00 0.00 0.00 3.33
632 640 5.529060 AGTTTTGAAGCTAAGAGGACAACAG 59.471 40.000 0.00 0.00 0.00 3.16
633 641 3.045601 TGAAGCTAAGAGGACAACAGC 57.954 47.619 0.00 0.00 0.00 4.40
634 642 2.368548 TGAAGCTAAGAGGACAACAGCA 59.631 45.455 0.00 0.00 34.65 4.41
635 643 3.181455 TGAAGCTAAGAGGACAACAGCAA 60.181 43.478 0.00 0.00 34.65 3.91
636 644 3.051081 AGCTAAGAGGACAACAGCAAG 57.949 47.619 0.00 0.00 34.65 4.01
637 645 1.466558 GCTAAGAGGACAACAGCAAGC 59.533 52.381 0.00 0.00 32.46 4.01
638 646 2.873649 GCTAAGAGGACAACAGCAAGCT 60.874 50.000 0.00 0.00 32.46 3.74
639 647 1.889545 AAGAGGACAACAGCAAGCTC 58.110 50.000 0.00 0.00 0.00 4.09
640 648 0.036022 AGAGGACAACAGCAAGCTCC 59.964 55.000 0.00 0.00 0.00 4.70
641 649 1.294659 GAGGACAACAGCAAGCTCCG 61.295 60.000 0.00 0.00 0.00 4.63
642 650 2.558313 GACAACAGCAAGCTCCGC 59.442 61.111 0.00 0.00 0.00 5.54
643 651 3.300667 GACAACAGCAAGCTCCGCG 62.301 63.158 0.00 0.00 0.00 6.46
644 652 3.349006 CAACAGCAAGCTCCGCGT 61.349 61.111 4.92 2.08 0.00 6.01
645 653 3.044305 AACAGCAAGCTCCGCGTC 61.044 61.111 4.92 0.00 0.00 5.19
648 656 4.357947 AGCAAGCTCCGCGTCGAA 62.358 61.111 4.92 0.00 0.00 3.71
649 657 3.411351 GCAAGCTCCGCGTCGAAA 61.411 61.111 4.92 0.00 0.00 3.46
650 658 2.740714 GCAAGCTCCGCGTCGAAAT 61.741 57.895 4.92 0.00 0.00 2.17
651 659 1.059369 CAAGCTCCGCGTCGAAATG 59.941 57.895 4.92 0.00 0.00 2.32
652 660 1.374252 AAGCTCCGCGTCGAAATGT 60.374 52.632 4.92 0.00 0.00 2.71
653 661 1.626654 AAGCTCCGCGTCGAAATGTG 61.627 55.000 4.92 0.00 0.00 3.21
654 662 2.092291 GCTCCGCGTCGAAATGTGA 61.092 57.895 4.92 0.00 0.00 3.58
655 663 1.623081 GCTCCGCGTCGAAATGTGAA 61.623 55.000 4.92 0.00 0.00 3.18
656 664 0.366871 CTCCGCGTCGAAATGTGAAG 59.633 55.000 4.92 0.00 0.00 3.02
657 665 1.225745 CCGCGTCGAAATGTGAAGC 60.226 57.895 4.92 0.00 37.46 3.86
658 666 1.491127 CGCGTCGAAATGTGAAGCA 59.509 52.632 0.00 0.00 40.24 3.91
659 667 0.110867 CGCGTCGAAATGTGAAGCAA 60.111 50.000 0.00 0.00 40.24 3.91
660 668 1.595609 GCGTCGAAATGTGAAGCAAG 58.404 50.000 0.00 0.00 40.03 4.01
661 669 1.595609 CGTCGAAATGTGAAGCAAGC 58.404 50.000 0.00 0.00 0.00 4.01
662 670 1.725931 CGTCGAAATGTGAAGCAAGCC 60.726 52.381 0.00 0.00 0.00 4.35
663 671 0.516877 TCGAAATGTGAAGCAAGCCG 59.483 50.000 0.00 0.00 0.00 5.52
664 672 1.067199 CGAAATGTGAAGCAAGCCGC 61.067 55.000 0.00 0.00 42.91 6.53
682 690 3.910734 GCTAGCGCGCTACTCTTC 58.089 61.111 35.48 17.89 0.00 2.87
683 691 1.659026 GCTAGCGCGCTACTCTTCC 60.659 63.158 35.48 15.69 0.00 3.46
684 692 2.026522 CTAGCGCGCTACTCTTCCT 58.973 57.895 35.48 13.00 0.00 3.36
685 693 0.040781 CTAGCGCGCTACTCTTCCTC 60.041 60.000 35.48 0.00 0.00 3.71
686 694 0.464013 TAGCGCGCTACTCTTCCTCT 60.464 55.000 35.48 11.63 0.00 3.69
687 695 0.464013 AGCGCGCTACTCTTCCTCTA 60.464 55.000 35.79 0.00 0.00 2.43
688 696 0.594110 GCGCGCTACTCTTCCTCTAT 59.406 55.000 26.67 0.00 0.00 1.98
689 697 1.664588 GCGCGCTACTCTTCCTCTATG 60.665 57.143 26.67 0.00 0.00 2.23
690 698 1.874231 CGCGCTACTCTTCCTCTATGA 59.126 52.381 5.56 0.00 0.00 2.15
691 699 2.095969 CGCGCTACTCTTCCTCTATGAG 60.096 54.545 5.56 0.00 35.87 2.90
692 700 2.351350 GCGCTACTCTTCCTCTATGAGC 60.351 54.545 0.00 0.00 33.62 4.26
693 701 2.095969 CGCTACTCTTCCTCTATGAGCG 60.096 54.545 0.00 0.00 33.62 5.03
694 702 3.142951 GCTACTCTTCCTCTATGAGCGA 58.857 50.000 0.00 0.00 33.62 4.93
695 703 3.188460 GCTACTCTTCCTCTATGAGCGAG 59.812 52.174 0.00 0.00 33.62 5.03
696 704 3.569194 ACTCTTCCTCTATGAGCGAGA 57.431 47.619 11.04 6.13 33.62 4.04
697 705 3.211045 ACTCTTCCTCTATGAGCGAGAC 58.789 50.000 11.04 0.00 33.62 3.36
698 706 3.118038 ACTCTTCCTCTATGAGCGAGACT 60.118 47.826 11.04 0.00 33.62 3.24
699 707 3.210227 TCTTCCTCTATGAGCGAGACTG 58.790 50.000 0.00 0.00 0.00 3.51
700 708 2.719531 TCCTCTATGAGCGAGACTGT 57.280 50.000 0.00 0.00 0.00 3.55
701 709 2.566913 TCCTCTATGAGCGAGACTGTC 58.433 52.381 0.00 0.00 0.00 3.51
702 710 2.171659 TCCTCTATGAGCGAGACTGTCT 59.828 50.000 10.66 10.66 0.00 3.41
703 711 3.388350 TCCTCTATGAGCGAGACTGTCTA 59.612 47.826 10.86 0.00 0.00 2.59
704 712 3.745975 CCTCTATGAGCGAGACTGTCTAG 59.254 52.174 10.86 11.97 0.00 2.43
705 713 4.502431 CCTCTATGAGCGAGACTGTCTAGA 60.502 50.000 20.09 11.87 0.00 2.43
706 714 5.222079 TCTATGAGCGAGACTGTCTAGAT 57.778 43.478 20.09 14.70 0.00 1.98
707 715 6.347859 TCTATGAGCGAGACTGTCTAGATA 57.652 41.667 20.09 9.12 0.00 1.98
708 716 6.941857 TCTATGAGCGAGACTGTCTAGATAT 58.058 40.000 20.09 12.48 0.00 1.63
709 717 8.068892 TCTATGAGCGAGACTGTCTAGATATA 57.931 38.462 20.09 12.85 0.00 0.86
710 718 6.978343 ATGAGCGAGACTGTCTAGATATAC 57.022 41.667 20.09 4.59 0.00 1.47
711 719 6.104146 TGAGCGAGACTGTCTAGATATACT 57.896 41.667 20.09 8.12 0.00 2.12
712 720 5.929415 TGAGCGAGACTGTCTAGATATACTG 59.071 44.000 20.09 1.42 0.00 2.74
713 721 6.104146 AGCGAGACTGTCTAGATATACTGA 57.896 41.667 20.09 0.00 0.00 3.41
714 722 6.707290 AGCGAGACTGTCTAGATATACTGAT 58.293 40.000 20.09 0.00 0.00 2.90
715 723 6.816640 AGCGAGACTGTCTAGATATACTGATC 59.183 42.308 20.09 0.00 0.00 2.92
716 724 6.237728 GCGAGACTGTCTAGATATACTGATCG 60.238 46.154 20.09 11.37 34.24 3.69
717 725 7.030768 CGAGACTGTCTAGATATACTGATCGA 58.969 42.308 10.86 0.00 33.66 3.59
718 726 7.542824 CGAGACTGTCTAGATATACTGATCGAA 59.457 40.741 10.86 0.00 33.66 3.71
719 727 8.771920 AGACTGTCTAGATATACTGATCGAAG 57.228 38.462 8.91 0.00 0.00 3.79
720 728 8.590204 AGACTGTCTAGATATACTGATCGAAGA 58.410 37.037 8.91 0.00 45.75 2.87
721 729 9.210329 GACTGTCTAGATATACTGATCGAAGAA 57.790 37.037 0.00 0.00 43.58 2.52
722 730 8.995220 ACTGTCTAGATATACTGATCGAAGAAC 58.005 37.037 0.00 0.00 43.58 3.01
723 731 9.214957 CTGTCTAGATATACTGATCGAAGAACT 57.785 37.037 0.00 0.00 43.58 3.01
724 732 9.210329 TGTCTAGATATACTGATCGAAGAACTC 57.790 37.037 0.00 0.00 43.58 3.01
725 733 8.662141 GTCTAGATATACTGATCGAAGAACTCC 58.338 40.741 0.00 0.00 43.58 3.85
726 734 6.489127 AGATATACTGATCGAAGAACTCCG 57.511 41.667 0.00 0.00 43.58 4.63
727 735 2.846039 TACTGATCGAAGAACTCCGC 57.154 50.000 0.00 0.00 43.58 5.54
728 736 0.179161 ACTGATCGAAGAACTCCGCG 60.179 55.000 0.00 0.00 43.58 6.46
729 737 0.098905 CTGATCGAAGAACTCCGCGA 59.901 55.000 8.23 0.00 43.58 5.87
730 738 0.098905 TGATCGAAGAACTCCGCGAG 59.901 55.000 8.23 5.77 43.58 5.03
731 739 1.203600 GATCGAAGAACTCCGCGAGC 61.204 60.000 8.23 0.00 43.58 5.03
732 740 2.921538 ATCGAAGAACTCCGCGAGCG 62.922 60.000 8.23 10.86 43.58 5.03
763 771 1.130186 GAGGTCTCGAGTTCGTGTACC 59.870 57.143 13.13 10.61 40.80 3.34
764 772 0.169894 GGTCTCGAGTTCGTGTACCC 59.830 60.000 13.13 0.00 40.80 3.69
769 777 0.169672 CGAGTTCGTGTACCCGTGAT 59.830 55.000 0.00 0.00 34.11 3.06
803 811 2.559998 ACAACAAAGTGAGCGTTTGG 57.440 45.000 8.20 0.00 38.90 3.28
833 841 2.476619 CAGTTACAGCGAACCACTTCAG 59.523 50.000 0.00 0.00 0.00 3.02
855 863 2.223433 CCGATCTACGTAGTGTTGGACC 60.223 54.545 21.53 0.00 45.73 4.46
866 874 2.281484 TTGGACCTGCGCCAAGAC 60.281 61.111 4.18 0.00 40.32 3.01
876 884 2.426023 GCCAAGACCCGTGTGACT 59.574 61.111 0.00 0.00 0.00 3.41
903 911 0.108615 AGGCGTTCGTCAGGATTGAG 60.109 55.000 0.00 0.00 32.98 3.02
906 914 0.994995 CGTTCGTCAGGATTGAGCTG 59.005 55.000 0.00 0.00 32.98 4.24
910 918 0.108472 CGTCAGGATTGAGCTGCTGA 60.108 55.000 7.01 0.00 40.75 4.26
922 930 0.952984 GCTGCTGAAGAAGGTTCGCT 60.953 55.000 0.00 0.00 0.00 4.93
936 944 2.357952 GGTTCGCTGGATAACATTTCCC 59.642 50.000 0.00 0.00 31.87 3.97
1107 2036 2.579201 CTGACGCCGTGGGATCTT 59.421 61.111 0.00 0.00 0.00 2.40
1439 10246 4.681978 GCTCAACGGGGTGCTCGT 62.682 66.667 0.00 0.00 43.14 4.18
2532 15026 0.523519 GCAGCAACTTTCCCTACAGC 59.476 55.000 0.00 0.00 0.00 4.40
2542 15036 3.313874 CCTACAGCTGGGACCTGG 58.686 66.667 19.93 6.59 34.65 4.45
2547 15041 4.599500 AGCTGGGACCTGGGGTGT 62.599 66.667 0.00 0.00 35.25 4.16
2551 15045 0.539669 CTGGGACCTGGGGTGTTTTC 60.540 60.000 0.00 0.00 35.25 2.29
2556 15050 2.769663 GGACCTGGGGTGTTTTCTTTTT 59.230 45.455 0.00 0.00 35.25 1.94
2583 15077 9.591792 TCAGTTTGACTAATTCACATCTAGATG 57.408 33.333 27.63 27.63 44.15 2.90
2611 15105 8.561738 TTTAAAGATGTCACATCTAAACTCCC 57.438 34.615 20.94 0.00 0.00 4.30
2613 15107 5.091261 AGATGTCACATCTAAACTCCCAC 57.909 43.478 19.29 0.00 0.00 4.61
2614 15108 4.532126 AGATGTCACATCTAAACTCCCACA 59.468 41.667 19.29 0.00 0.00 4.17
2615 15109 4.698201 TGTCACATCTAAACTCCCACAA 57.302 40.909 0.00 0.00 0.00 3.33
2616 15110 5.042463 TGTCACATCTAAACTCCCACAAA 57.958 39.130 0.00 0.00 0.00 2.83
2617 15111 5.630121 TGTCACATCTAAACTCCCACAAAT 58.370 37.500 0.00 0.00 0.00 2.32
2619 15113 7.402054 TGTCACATCTAAACTCCCACAAATAT 58.598 34.615 0.00 0.00 0.00 1.28
2621 15115 9.561069 GTCACATCTAAACTCCCACAAATATAT 57.439 33.333 0.00 0.00 0.00 0.86
2631 15125 9.860650 AACTCCCACAAATATATAATGTAGCAA 57.139 29.630 4.31 0.00 0.00 3.91
2632 15126 9.284968 ACTCCCACAAATATATAATGTAGCAAC 57.715 33.333 4.31 0.00 0.00 4.17
2633 15127 9.283768 CTCCCACAAATATATAATGTAGCAACA 57.716 33.333 4.31 0.00 40.69 3.33
2634 15128 9.634021 TCCCACAAATATATAATGTAGCAACAA 57.366 29.630 4.31 0.00 39.58 2.83
2635 15129 9.897744 CCCACAAATATATAATGTAGCAACAAG 57.102 33.333 4.31 0.00 39.58 3.16
2680 15174 6.619801 AAATAGACCACAAACAGAGTGAAC 57.380 37.500 0.00 0.00 39.30 3.18
2682 15176 4.156455 AGACCACAAACAGAGTGAACAT 57.844 40.909 0.00 0.00 39.30 2.71
2683 15177 4.130118 AGACCACAAACAGAGTGAACATC 58.870 43.478 0.00 0.00 39.30 3.06
2684 15178 3.876914 GACCACAAACAGAGTGAACATCA 59.123 43.478 0.00 0.00 39.30 3.07
2687 15181 3.562973 CACAAACAGAGTGAACATCAGCT 59.437 43.478 0.00 0.00 39.30 4.24
2688 15182 4.036027 CACAAACAGAGTGAACATCAGCTT 59.964 41.667 0.00 0.00 39.30 3.74
2689 15183 5.237127 CACAAACAGAGTGAACATCAGCTTA 59.763 40.000 0.00 0.00 39.30 3.09
2690 15184 5.468072 ACAAACAGAGTGAACATCAGCTTAG 59.532 40.000 0.00 0.00 0.00 2.18
2692 15186 5.674052 ACAGAGTGAACATCAGCTTAGAT 57.326 39.130 0.00 0.00 0.00 1.98
2706 15200 8.923683 CATCAGCTTAGATGTGACATAACTATG 58.076 37.037 0.00 0.92 40.35 2.23
2721 15215 8.076714 ACATAACTATGTCACATCTAAATGCG 57.923 34.615 0.00 0.00 42.96 4.73
2722 15216 5.409643 AACTATGTCACATCTAAATGCGC 57.590 39.130 0.00 0.00 36.26 6.09
2723 15217 3.809832 ACTATGTCACATCTAAATGCGCC 59.190 43.478 4.18 0.00 36.26 6.53
2724 15218 1.378531 TGTCACATCTAAATGCGCCC 58.621 50.000 4.18 0.00 36.26 6.13
2725 15219 1.065491 TGTCACATCTAAATGCGCCCT 60.065 47.619 4.18 0.00 36.26 5.19
2727 15221 2.802816 GTCACATCTAAATGCGCCCTAG 59.197 50.000 4.18 2.84 36.26 3.02
2729 15223 2.802816 CACATCTAAATGCGCCCTAGAC 59.197 50.000 4.18 0.00 36.26 2.59
2730 15224 2.434336 ACATCTAAATGCGCCCTAGACA 59.566 45.455 4.18 0.00 36.26 3.41
2732 15226 2.384828 TCTAAATGCGCCCTAGACAGA 58.615 47.619 4.18 0.00 0.00 3.41
2733 15227 2.100916 TCTAAATGCGCCCTAGACAGAC 59.899 50.000 4.18 0.00 0.00 3.51
2734 15228 0.905357 AAATGCGCCCTAGACAGACT 59.095 50.000 4.18 0.00 0.00 3.24
2736 15230 0.905357 ATGCGCCCTAGACAGACTTT 59.095 50.000 4.18 0.00 0.00 2.66
2737 15231 0.685097 TGCGCCCTAGACAGACTTTT 59.315 50.000 4.18 0.00 0.00 2.27
2738 15232 1.071699 TGCGCCCTAGACAGACTTTTT 59.928 47.619 4.18 0.00 0.00 1.94
2739 15233 1.732809 GCGCCCTAGACAGACTTTTTC 59.267 52.381 0.00 0.00 0.00 2.29
2743 15237 5.235516 CGCCCTAGACAGACTTTTTCTTTA 58.764 41.667 0.00 0.00 28.96 1.85
2744 15238 5.120363 CGCCCTAGACAGACTTTTTCTTTAC 59.880 44.000 0.00 0.00 28.96 2.01
2745 15239 6.231951 GCCCTAGACAGACTTTTTCTTTACT 58.768 40.000 0.00 0.00 28.96 2.24
2746 15240 7.384477 GCCCTAGACAGACTTTTTCTTTACTA 58.616 38.462 0.00 0.00 28.96 1.82
2771 15309 2.222027 CCTTGGGTGAACTTGACAGAC 58.778 52.381 0.00 0.00 0.00 3.51
2773 15311 2.325583 TGGGTGAACTTGACAGACAC 57.674 50.000 0.00 0.00 33.44 3.67
2774 15312 1.217882 GGGTGAACTTGACAGACACG 58.782 55.000 0.00 0.00 34.29 4.49
2778 15316 3.553096 GGTGAACTTGACAGACACGATCT 60.553 47.826 0.00 0.00 38.66 2.75
2780 15318 4.149046 GTGAACTTGACAGACACGATCTTC 59.851 45.833 0.00 0.00 34.41 2.87
2836 15448 6.294508 GCAAGGCCTTTTCATCACTACTAAAA 60.295 38.462 17.61 0.00 0.00 1.52
2837 15449 7.577616 GCAAGGCCTTTTCATCACTACTAAAAT 60.578 37.037 17.61 0.00 0.00 1.82
2838 15450 7.396540 AGGCCTTTTCATCACTACTAAAATG 57.603 36.000 0.00 0.00 0.00 2.32
2839 15451 7.175104 AGGCCTTTTCATCACTACTAAAATGA 58.825 34.615 0.00 0.00 0.00 2.57
2841 15453 8.470002 GGCCTTTTCATCACTACTAAAATGATT 58.530 33.333 0.00 0.00 30.58 2.57
2842 15454 9.294030 GCCTTTTCATCACTACTAAAATGATTG 57.706 33.333 0.00 0.00 30.58 2.67
2843 15455 9.294030 CCTTTTCATCACTACTAAAATGATTGC 57.706 33.333 0.00 0.00 30.58 3.56
2844 15456 9.844790 CTTTTCATCACTACTAAAATGATTGCA 57.155 29.630 0.00 0.00 30.58 4.08
2846 15458 9.791820 TTTCATCACTACTAAAATGATTGCATG 57.208 29.630 0.00 0.00 34.26 4.06
2847 15459 8.510243 TCATCACTACTAAAATGATTGCATGT 57.490 30.769 0.00 0.00 34.26 3.21
2848 15460 8.959548 TCATCACTACTAAAATGATTGCATGTT 58.040 29.630 0.00 0.00 36.03 2.71
2881 15493 9.001542 GCATTAATTACACGGTTATATTGGGTA 57.998 33.333 0.00 0.00 0.00 3.69
2883 15495 9.729281 ATTAATTACACGGTTATATTGGGTAGG 57.271 33.333 0.00 0.00 0.00 3.18
2886 15498 5.899631 ACACGGTTATATTGGGTAGGATT 57.100 39.130 0.00 0.00 0.00 3.01
2892 15504 8.662255 ACGGTTATATTGGGTAGGATTTCAATA 58.338 33.333 0.00 0.00 36.78 1.90
2893 15505 9.509956 CGGTTATATTGGGTAGGATTTCAATAA 57.490 33.333 0.00 0.00 36.22 1.40
2933 15545 9.383519 TGATTAGAACAGAAGGTGATATTTGAC 57.616 33.333 0.00 0.00 0.00 3.18
2934 15546 7.827819 TTAGAACAGAAGGTGATATTTGACG 57.172 36.000 0.00 0.00 0.00 4.35
2935 15547 4.631813 AGAACAGAAGGTGATATTTGACGC 59.368 41.667 0.00 0.00 0.00 5.19
2946 15558 7.551262 AGGTGATATTTGACGCTAAACATGTTA 59.449 33.333 12.39 0.00 0.00 2.41
2960 15572 7.011763 GCTAAACATGTTAAGCTCTCATCATCA 59.988 37.037 12.39 0.00 32.18 3.07
3056 15668 9.793252 GATTGATGTCTAAACTTGCAAATACAT 57.207 29.630 0.00 0.00 0.00 2.29
3096 15708 0.879839 TCGCATGATGCATACACGGG 60.880 55.000 18.47 1.10 45.36 5.28
3149 15761 3.760035 ACGGAGTGCTAGGTGGCG 61.760 66.667 0.00 0.00 42.51 5.69
3176 15788 2.354103 CCCACATGTCAGTAGGTGTGAG 60.354 54.545 0.00 0.00 43.41 3.51
3182 15794 1.801913 CAGTAGGTGTGAGCGTCGC 60.802 63.158 9.80 9.80 0.00 5.19
3207 15819 2.032178 GCTAGTGATGGGCGTGATTTTC 59.968 50.000 0.00 0.00 0.00 2.29
3217 15829 1.243342 CGTGATTTTCAGGCCAGCCA 61.243 55.000 12.03 0.00 38.92 4.75
3218 15830 0.244721 GTGATTTTCAGGCCAGCCAC 59.755 55.000 12.03 0.00 38.92 5.01
3228 15840 0.183492 GGCCAGCCACCAGAATGATA 59.817 55.000 3.12 0.00 34.98 2.15
3229 15841 1.410083 GGCCAGCCACCAGAATGATAA 60.410 52.381 3.12 0.00 34.98 1.75
3234 15846 5.513094 GCCAGCCACCAGAATGATAATACTA 60.513 44.000 0.00 0.00 39.69 1.82
3235 15847 5.934625 CCAGCCACCAGAATGATAATACTAC 59.065 44.000 0.00 0.00 39.69 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 7.644551 AGATAAACTAGAAACTCGCTATGTTCG 59.355 37.037 0.00 0.00 0.00 3.95
104 105 2.234913 GAACCGGCCGTGTATCAGGT 62.235 60.000 26.12 9.18 0.00 4.00
365 373 5.891551 ACAGTGGGTAAAATTCAACTGAAGT 59.108 36.000 7.56 0.00 37.48 3.01
381 389 2.114616 TGCCAATTTTTGACAGTGGGT 58.885 42.857 0.00 0.00 0.00 4.51
408 416 2.352127 GAAAGTGAAGCCCACATTCAGC 60.352 50.000 15.49 0.00 46.81 4.26
468 476 3.420214 TAGGCGTCGGGCGAATGAC 62.420 63.158 6.02 0.00 44.92 3.06
469 477 3.133767 CTAGGCGTCGGGCGAATGA 62.134 63.158 6.02 0.00 44.92 2.57
470 478 2.658593 CTAGGCGTCGGGCGAATG 60.659 66.667 6.02 0.00 44.92 2.67
471 479 4.587189 GCTAGGCGTCGGGCGAAT 62.587 66.667 6.02 0.00 44.92 3.34
476 484 2.831742 TACCAGCTAGGCGTCGGG 60.832 66.667 0.00 0.00 43.14 5.14
477 485 2.412112 GTACCAGCTAGGCGTCGG 59.588 66.667 0.00 0.00 43.14 4.79
478 486 2.412112 GGTACCAGCTAGGCGTCG 59.588 66.667 7.15 0.00 43.14 5.12
479 487 1.141234 GTGGTACCAGCTAGGCGTC 59.859 63.158 16.93 0.00 43.14 5.19
480 488 0.976073 ATGTGGTACCAGCTAGGCGT 60.976 55.000 16.93 0.18 43.14 5.68
481 489 1.037493 TATGTGGTACCAGCTAGGCG 58.963 55.000 16.93 0.00 43.14 5.52
482 490 2.040178 AGTATGTGGTACCAGCTAGGC 58.960 52.381 16.93 2.49 43.14 3.93
483 491 4.755266 AAAGTATGTGGTACCAGCTAGG 57.245 45.455 16.93 0.00 45.67 3.02
484 492 6.466885 AGTAAAGTATGTGGTACCAGCTAG 57.533 41.667 16.93 0.00 33.58 3.42
485 493 6.891361 TGTAGTAAAGTATGTGGTACCAGCTA 59.109 38.462 16.93 7.06 33.58 3.32
486 494 5.718130 TGTAGTAAAGTATGTGGTACCAGCT 59.282 40.000 16.93 8.17 33.58 4.24
487 495 5.969423 TGTAGTAAAGTATGTGGTACCAGC 58.031 41.667 16.93 11.06 33.58 4.85
488 496 7.705325 GTGATGTAGTAAAGTATGTGGTACCAG 59.295 40.741 16.93 0.00 33.58 4.00
489 497 7.364056 GGTGATGTAGTAAAGTATGTGGTACCA 60.364 40.741 11.60 11.60 33.58 3.25
490 498 6.982724 GGTGATGTAGTAAAGTATGTGGTACC 59.017 42.308 4.43 4.43 33.58 3.34
491 499 7.549839 TGGTGATGTAGTAAAGTATGTGGTAC 58.450 38.462 0.00 0.00 0.00 3.34
492 500 7.721409 TGGTGATGTAGTAAAGTATGTGGTA 57.279 36.000 0.00 0.00 0.00 3.25
493 501 6.614694 TGGTGATGTAGTAAAGTATGTGGT 57.385 37.500 0.00 0.00 0.00 4.16
494 502 6.315393 GGTTGGTGATGTAGTAAAGTATGTGG 59.685 42.308 0.00 0.00 0.00 4.17
495 503 7.103641 AGGTTGGTGATGTAGTAAAGTATGTG 58.896 38.462 0.00 0.00 0.00 3.21
496 504 7.038587 TGAGGTTGGTGATGTAGTAAAGTATGT 60.039 37.037 0.00 0.00 0.00 2.29
497 505 7.327975 TGAGGTTGGTGATGTAGTAAAGTATG 58.672 38.462 0.00 0.00 0.00 2.39
498 506 7.490657 TGAGGTTGGTGATGTAGTAAAGTAT 57.509 36.000 0.00 0.00 0.00 2.12
499 507 6.921486 TGAGGTTGGTGATGTAGTAAAGTA 57.079 37.500 0.00 0.00 0.00 2.24
500 508 5.818678 TGAGGTTGGTGATGTAGTAAAGT 57.181 39.130 0.00 0.00 0.00 2.66
501 509 6.878923 TGATTGAGGTTGGTGATGTAGTAAAG 59.121 38.462 0.00 0.00 0.00 1.85
502 510 6.774673 TGATTGAGGTTGGTGATGTAGTAAA 58.225 36.000 0.00 0.00 0.00 2.01
503 511 6.367374 TGATTGAGGTTGGTGATGTAGTAA 57.633 37.500 0.00 0.00 0.00 2.24
504 512 6.348498 CATGATTGAGGTTGGTGATGTAGTA 58.652 40.000 0.00 0.00 0.00 1.82
505 513 4.908601 TGATTGAGGTTGGTGATGTAGT 57.091 40.909 0.00 0.00 0.00 2.73
506 514 4.577693 CCATGATTGAGGTTGGTGATGTAG 59.422 45.833 0.00 0.00 0.00 2.74
507 515 4.525996 CCATGATTGAGGTTGGTGATGTA 58.474 43.478 0.00 0.00 0.00 2.29
508 516 3.359033 CCATGATTGAGGTTGGTGATGT 58.641 45.455 0.00 0.00 0.00 3.06
509 517 2.100252 GCCATGATTGAGGTTGGTGATG 59.900 50.000 0.00 0.00 0.00 3.07
510 518 2.381911 GCCATGATTGAGGTTGGTGAT 58.618 47.619 0.00 0.00 0.00 3.06
511 519 1.616725 GGCCATGATTGAGGTTGGTGA 60.617 52.381 0.00 0.00 0.00 4.02
512 520 0.819582 GGCCATGATTGAGGTTGGTG 59.180 55.000 0.00 0.00 0.00 4.17
513 521 0.680921 CGGCCATGATTGAGGTTGGT 60.681 55.000 2.24 0.00 0.00 3.67
514 522 2.008268 GCGGCCATGATTGAGGTTGG 62.008 60.000 2.24 0.00 0.00 3.77
515 523 1.314534 TGCGGCCATGATTGAGGTTG 61.315 55.000 2.24 0.00 0.00 3.77
516 524 0.396139 ATGCGGCCATGATTGAGGTT 60.396 50.000 2.24 0.00 0.00 3.50
517 525 0.820891 GATGCGGCCATGATTGAGGT 60.821 55.000 2.24 0.00 0.00 3.85
518 526 0.820482 TGATGCGGCCATGATTGAGG 60.820 55.000 2.24 0.00 0.00 3.86
519 527 1.199327 GATGATGCGGCCATGATTGAG 59.801 52.381 2.24 0.00 0.00 3.02
520 528 1.202842 AGATGATGCGGCCATGATTGA 60.203 47.619 2.24 0.00 0.00 2.57
521 529 1.068541 CAGATGATGCGGCCATGATTG 60.069 52.381 2.24 0.00 0.00 2.67
522 530 1.244816 CAGATGATGCGGCCATGATT 58.755 50.000 2.24 0.00 0.00 2.57
523 531 0.608308 CCAGATGATGCGGCCATGAT 60.608 55.000 2.24 0.00 0.00 2.45
524 532 1.228033 CCAGATGATGCGGCCATGA 60.228 57.895 2.24 0.00 0.00 3.07
525 533 2.265904 CCCAGATGATGCGGCCATG 61.266 63.158 2.24 0.00 0.00 3.66
526 534 1.786407 ATCCCAGATGATGCGGCCAT 61.786 55.000 2.24 0.00 0.00 4.40
527 535 2.401699 GATCCCAGATGATGCGGCCA 62.402 60.000 2.24 0.00 0.00 5.36
528 536 1.673665 GATCCCAGATGATGCGGCC 60.674 63.158 0.00 0.00 0.00 6.13
529 537 0.535780 TTGATCCCAGATGATGCGGC 60.536 55.000 0.00 0.00 0.00 6.53
530 538 1.810755 CATTGATCCCAGATGATGCGG 59.189 52.381 0.00 0.00 0.00 5.69
531 539 2.774687 TCATTGATCCCAGATGATGCG 58.225 47.619 0.00 0.00 0.00 4.73
532 540 5.498393 ACTATCATTGATCCCAGATGATGC 58.502 41.667 1.55 0.00 39.93 3.91
533 541 7.997773 AAACTATCATTGATCCCAGATGATG 57.002 36.000 1.55 10.61 39.93 3.07
534 542 9.109246 TCTAAACTATCATTGATCCCAGATGAT 57.891 33.333 1.55 12.56 41.81 2.45
535 543 8.496534 TCTAAACTATCATTGATCCCAGATGA 57.503 34.615 1.55 0.00 34.61 2.92
536 544 8.997323 GTTCTAAACTATCATTGATCCCAGATG 58.003 37.037 1.55 0.00 0.00 2.90
537 545 8.160106 GGTTCTAAACTATCATTGATCCCAGAT 58.840 37.037 1.55 0.00 0.00 2.90
538 546 7.127186 TGGTTCTAAACTATCATTGATCCCAGA 59.873 37.037 1.55 0.00 0.00 3.86
539 547 7.282585 TGGTTCTAAACTATCATTGATCCCAG 58.717 38.462 1.55 0.00 0.00 4.45
540 548 7.206789 TGGTTCTAAACTATCATTGATCCCA 57.793 36.000 1.55 0.00 0.00 4.37
541 549 6.205658 GCTGGTTCTAAACTATCATTGATCCC 59.794 42.308 1.55 0.00 0.00 3.85
542 550 6.767902 TGCTGGTTCTAAACTATCATTGATCC 59.232 38.462 1.55 0.00 0.00 3.36
543 551 7.792374 TGCTGGTTCTAAACTATCATTGATC 57.208 36.000 1.55 0.00 0.00 2.92
544 552 8.579850 TTTGCTGGTTCTAAACTATCATTGAT 57.420 30.769 4.28 4.28 0.00 2.57
545 553 7.994425 TTTGCTGGTTCTAAACTATCATTGA 57.006 32.000 0.00 0.00 0.00 2.57
546 554 7.756722 CCTTTTGCTGGTTCTAAACTATCATTG 59.243 37.037 0.00 0.00 0.00 2.82
547 555 7.669722 TCCTTTTGCTGGTTCTAAACTATCATT 59.330 33.333 0.00 0.00 0.00 2.57
548 556 7.175104 TCCTTTTGCTGGTTCTAAACTATCAT 58.825 34.615 0.00 0.00 0.00 2.45
549 557 6.539173 TCCTTTTGCTGGTTCTAAACTATCA 58.461 36.000 0.00 0.00 0.00 2.15
550 558 6.094186 CCTCCTTTTGCTGGTTCTAAACTATC 59.906 42.308 0.00 0.00 0.00 2.08
551 559 5.946377 CCTCCTTTTGCTGGTTCTAAACTAT 59.054 40.000 0.00 0.00 0.00 2.12
552 560 5.313712 CCTCCTTTTGCTGGTTCTAAACTA 58.686 41.667 0.00 0.00 0.00 2.24
553 561 4.145052 CCTCCTTTTGCTGGTTCTAAACT 58.855 43.478 0.00 0.00 0.00 2.66
554 562 3.305403 GCCTCCTTTTGCTGGTTCTAAAC 60.305 47.826 0.00 0.00 0.00 2.01
555 563 2.890945 GCCTCCTTTTGCTGGTTCTAAA 59.109 45.455 0.00 0.00 0.00 1.85
556 564 2.108250 AGCCTCCTTTTGCTGGTTCTAA 59.892 45.455 0.00 0.00 36.23 2.10
557 565 1.705186 AGCCTCCTTTTGCTGGTTCTA 59.295 47.619 0.00 0.00 36.23 2.10
558 566 0.480252 AGCCTCCTTTTGCTGGTTCT 59.520 50.000 0.00 0.00 36.23 3.01
559 567 3.042481 AGCCTCCTTTTGCTGGTTC 57.958 52.632 0.00 0.00 36.23 3.62
564 572 1.342496 GCTTTTCAGCCTCCTTTTGCT 59.658 47.619 0.00 0.00 40.61 3.91
565 573 1.788258 GCTTTTCAGCCTCCTTTTGC 58.212 50.000 0.00 0.00 40.61 3.68
575 583 1.722011 TAGCACTACGGCTTTTCAGC 58.278 50.000 0.00 0.00 42.71 4.26
576 584 2.092211 CGTTAGCACTACGGCTTTTCAG 59.908 50.000 0.00 0.00 42.71 3.02
577 585 2.063266 CGTTAGCACTACGGCTTTTCA 58.937 47.619 0.00 0.00 42.71 2.69
578 586 1.201888 GCGTTAGCACTACGGCTTTTC 60.202 52.381 7.26 0.00 42.71 2.29
579 587 0.794473 GCGTTAGCACTACGGCTTTT 59.206 50.000 7.26 0.00 42.71 2.27
580 588 2.452767 GCGTTAGCACTACGGCTTT 58.547 52.632 7.26 0.00 42.71 3.51
581 589 4.180496 GCGTTAGCACTACGGCTT 57.820 55.556 7.26 0.00 42.71 4.35
591 599 0.462047 ACTACAGGGCATGCGTTAGC 60.462 55.000 12.44 0.00 45.41 3.09
592 600 2.024176 AACTACAGGGCATGCGTTAG 57.976 50.000 12.44 11.13 0.00 2.34
593 601 2.483014 AAACTACAGGGCATGCGTTA 57.517 45.000 12.44 0.00 0.00 3.18
594 602 1.269448 CAAAACTACAGGGCATGCGTT 59.731 47.619 12.44 6.08 0.00 4.84
595 603 0.881118 CAAAACTACAGGGCATGCGT 59.119 50.000 12.44 6.78 0.00 5.24
596 604 1.164411 TCAAAACTACAGGGCATGCG 58.836 50.000 12.44 0.00 0.00 4.73
597 605 2.672195 GCTTCAAAACTACAGGGCATGC 60.672 50.000 9.90 9.90 0.00 4.06
598 606 2.821969 AGCTTCAAAACTACAGGGCATG 59.178 45.455 0.00 0.00 0.00 4.06
599 607 3.160679 AGCTTCAAAACTACAGGGCAT 57.839 42.857 0.00 0.00 0.00 4.40
600 608 2.656947 AGCTTCAAAACTACAGGGCA 57.343 45.000 0.00 0.00 0.00 5.36
601 609 4.324267 TCTTAGCTTCAAAACTACAGGGC 58.676 43.478 0.00 0.00 0.00 5.19
602 610 4.938226 CCTCTTAGCTTCAAAACTACAGGG 59.062 45.833 0.00 0.00 0.00 4.45
603 611 5.639931 GTCCTCTTAGCTTCAAAACTACAGG 59.360 44.000 0.00 0.00 0.00 4.00
604 612 6.223852 TGTCCTCTTAGCTTCAAAACTACAG 58.776 40.000 0.00 0.00 0.00 2.74
605 613 6.169557 TGTCCTCTTAGCTTCAAAACTACA 57.830 37.500 0.00 0.00 0.00 2.74
606 614 6.482308 TGTTGTCCTCTTAGCTTCAAAACTAC 59.518 38.462 0.00 0.00 0.00 2.73
607 615 6.588204 TGTTGTCCTCTTAGCTTCAAAACTA 58.412 36.000 0.00 0.00 0.00 2.24
608 616 5.437060 TGTTGTCCTCTTAGCTTCAAAACT 58.563 37.500 0.00 0.00 0.00 2.66
609 617 5.751243 TGTTGTCCTCTTAGCTTCAAAAC 57.249 39.130 0.00 0.00 0.00 2.43
610 618 4.275936 GCTGTTGTCCTCTTAGCTTCAAAA 59.724 41.667 0.00 0.00 0.00 2.44
611 619 3.815401 GCTGTTGTCCTCTTAGCTTCAAA 59.185 43.478 0.00 0.00 0.00 2.69
612 620 3.181455 TGCTGTTGTCCTCTTAGCTTCAA 60.181 43.478 0.00 0.00 35.50 2.69
613 621 2.368548 TGCTGTTGTCCTCTTAGCTTCA 59.631 45.455 0.00 0.00 35.50 3.02
614 622 3.045601 TGCTGTTGTCCTCTTAGCTTC 57.954 47.619 0.00 0.00 35.50 3.86
615 623 3.406764 CTTGCTGTTGTCCTCTTAGCTT 58.593 45.455 0.00 0.00 35.50 3.74
616 624 2.873649 GCTTGCTGTTGTCCTCTTAGCT 60.874 50.000 0.00 0.00 35.50 3.32
617 625 1.466558 GCTTGCTGTTGTCCTCTTAGC 59.533 52.381 0.00 0.00 35.06 3.09
618 626 2.999355 GAGCTTGCTGTTGTCCTCTTAG 59.001 50.000 0.00 0.00 0.00 2.18
619 627 2.289694 GGAGCTTGCTGTTGTCCTCTTA 60.290 50.000 0.00 0.00 0.00 2.10
620 628 1.544314 GGAGCTTGCTGTTGTCCTCTT 60.544 52.381 0.00 0.00 0.00 2.85
621 629 0.036022 GGAGCTTGCTGTTGTCCTCT 59.964 55.000 0.00 0.00 0.00 3.69
622 630 1.294659 CGGAGCTTGCTGTTGTCCTC 61.295 60.000 0.00 0.00 0.00 3.71
623 631 1.302033 CGGAGCTTGCTGTTGTCCT 60.302 57.895 0.00 0.00 0.00 3.85
624 632 3.257933 CGGAGCTTGCTGTTGTCC 58.742 61.111 0.00 0.00 0.00 4.02
637 645 0.366871 CTTCACATTTCGACGCGGAG 59.633 55.000 12.47 3.43 0.00 4.63
638 646 1.623081 GCTTCACATTTCGACGCGGA 61.623 55.000 12.47 0.00 0.00 5.54
639 647 1.225745 GCTTCACATTTCGACGCGG 60.226 57.895 12.47 0.00 0.00 6.46
640 648 0.110867 TTGCTTCACATTTCGACGCG 60.111 50.000 3.53 3.53 30.70 6.01
641 649 1.595609 CTTGCTTCACATTTCGACGC 58.404 50.000 0.00 0.00 0.00 5.19
642 650 1.595609 GCTTGCTTCACATTTCGACG 58.404 50.000 0.00 0.00 0.00 5.12
643 651 1.725931 CGGCTTGCTTCACATTTCGAC 60.726 52.381 0.00 0.00 0.00 4.20
644 652 0.516877 CGGCTTGCTTCACATTTCGA 59.483 50.000 0.00 0.00 0.00 3.71
645 653 1.067199 GCGGCTTGCTTCACATTTCG 61.067 55.000 0.00 0.00 41.73 3.46
646 654 1.067199 CGCGGCTTGCTTCACATTTC 61.067 55.000 0.00 0.00 43.27 2.17
647 655 1.081242 CGCGGCTTGCTTCACATTT 60.081 52.632 0.00 0.00 43.27 2.32
648 656 2.562912 CGCGGCTTGCTTCACATT 59.437 55.556 0.00 0.00 43.27 2.71
649 657 4.107051 GCGCGGCTTGCTTCACAT 62.107 61.111 8.83 0.00 43.27 3.21
650 658 3.874807 TAGCGCGGCTTGCTTCACA 62.875 57.895 8.83 0.00 43.71 3.58
651 659 3.088500 CTAGCGCGGCTTGCTTCAC 62.089 63.158 8.83 0.00 43.71 3.18
652 660 2.815211 CTAGCGCGGCTTGCTTCA 60.815 61.111 8.83 0.00 43.71 3.02
665 673 1.659026 GGAAGAGTAGCGCGCTAGC 60.659 63.158 39.08 31.26 40.74 3.42
666 674 0.040781 GAGGAAGAGTAGCGCGCTAG 60.041 60.000 39.08 0.00 0.00 3.42
667 675 0.464013 AGAGGAAGAGTAGCGCGCTA 60.464 55.000 35.48 35.48 0.00 4.26
668 676 0.464013 TAGAGGAAGAGTAGCGCGCT 60.464 55.000 38.01 38.01 0.00 5.92
669 677 0.594110 ATAGAGGAAGAGTAGCGCGC 59.406 55.000 26.66 26.66 0.00 6.86
670 678 1.874231 TCATAGAGGAAGAGTAGCGCG 59.126 52.381 0.00 0.00 0.00 6.86
671 679 2.351350 GCTCATAGAGGAAGAGTAGCGC 60.351 54.545 0.00 0.00 0.00 5.92
672 680 2.095969 CGCTCATAGAGGAAGAGTAGCG 60.096 54.545 0.00 0.00 44.42 4.26
673 681 3.142951 TCGCTCATAGAGGAAGAGTAGC 58.857 50.000 0.00 0.00 0.00 3.58
674 682 4.451096 GTCTCGCTCATAGAGGAAGAGTAG 59.549 50.000 0.00 0.00 36.45 2.57
675 683 4.101898 AGTCTCGCTCATAGAGGAAGAGTA 59.898 45.833 0.00 0.00 36.45 2.59
676 684 3.118038 AGTCTCGCTCATAGAGGAAGAGT 60.118 47.826 0.00 0.00 36.45 3.24
677 685 3.250762 CAGTCTCGCTCATAGAGGAAGAG 59.749 52.174 0.00 0.00 36.45 2.85
678 686 3.210227 CAGTCTCGCTCATAGAGGAAGA 58.790 50.000 0.00 0.00 36.45 2.87
679 687 2.948979 ACAGTCTCGCTCATAGAGGAAG 59.051 50.000 0.00 0.00 36.45 3.46
680 688 2.946329 GACAGTCTCGCTCATAGAGGAA 59.054 50.000 0.00 0.00 36.45 3.36
681 689 2.171659 AGACAGTCTCGCTCATAGAGGA 59.828 50.000 0.00 0.00 36.45 3.71
682 690 2.571212 AGACAGTCTCGCTCATAGAGG 58.429 52.381 0.00 0.00 36.45 3.69
683 691 4.627058 TCTAGACAGTCTCGCTCATAGAG 58.373 47.826 6.27 0.00 37.09 2.43
684 692 4.674281 TCTAGACAGTCTCGCTCATAGA 57.326 45.455 6.27 0.00 0.00 1.98
685 693 7.979537 AGTATATCTAGACAGTCTCGCTCATAG 59.020 40.741 6.27 0.00 0.00 2.23
686 694 7.762159 CAGTATATCTAGACAGTCTCGCTCATA 59.238 40.741 6.27 0.00 0.00 2.15
687 695 6.593770 CAGTATATCTAGACAGTCTCGCTCAT 59.406 42.308 6.27 0.00 0.00 2.90
688 696 5.929415 CAGTATATCTAGACAGTCTCGCTCA 59.071 44.000 6.27 0.00 0.00 4.26
689 697 6.160684 TCAGTATATCTAGACAGTCTCGCTC 58.839 44.000 6.27 0.00 0.00 5.03
690 698 6.104146 TCAGTATATCTAGACAGTCTCGCT 57.896 41.667 6.27 0.00 0.00 4.93
691 699 6.237728 CGATCAGTATATCTAGACAGTCTCGC 60.238 46.154 6.27 0.00 0.00 5.03
692 700 7.030768 TCGATCAGTATATCTAGACAGTCTCG 58.969 42.308 6.27 0.09 0.00 4.04
693 701 8.766000 TTCGATCAGTATATCTAGACAGTCTC 57.234 38.462 6.27 0.00 0.00 3.36
694 702 8.590204 TCTTCGATCAGTATATCTAGACAGTCT 58.410 37.037 8.50 8.50 0.00 3.24
695 703 8.766000 TCTTCGATCAGTATATCTAGACAGTC 57.234 38.462 0.00 0.00 0.00 3.51
696 704 8.995220 GTTCTTCGATCAGTATATCTAGACAGT 58.005 37.037 0.00 0.00 0.00 3.55
697 705 9.214957 AGTTCTTCGATCAGTATATCTAGACAG 57.785 37.037 0.00 0.00 0.00 3.51
698 706 9.210329 GAGTTCTTCGATCAGTATATCTAGACA 57.790 37.037 0.00 0.00 0.00 3.41
699 707 8.662141 GGAGTTCTTCGATCAGTATATCTAGAC 58.338 40.741 0.00 0.00 0.00 2.59
700 708 7.546316 CGGAGTTCTTCGATCAGTATATCTAGA 59.454 40.741 0.00 0.00 0.00 2.43
701 709 7.675403 GCGGAGTTCTTCGATCAGTATATCTAG 60.675 44.444 4.58 0.00 0.00 2.43
702 710 6.092396 GCGGAGTTCTTCGATCAGTATATCTA 59.908 42.308 4.58 0.00 0.00 1.98
703 711 5.106475 GCGGAGTTCTTCGATCAGTATATCT 60.106 44.000 4.58 0.00 0.00 1.98
704 712 5.090083 GCGGAGTTCTTCGATCAGTATATC 58.910 45.833 4.58 0.00 0.00 1.63
705 713 4.378563 CGCGGAGTTCTTCGATCAGTATAT 60.379 45.833 4.58 0.00 0.00 0.86
706 714 3.059120 CGCGGAGTTCTTCGATCAGTATA 60.059 47.826 4.58 0.00 0.00 1.47
707 715 2.287069 CGCGGAGTTCTTCGATCAGTAT 60.287 50.000 4.58 0.00 0.00 2.12
708 716 1.063616 CGCGGAGTTCTTCGATCAGTA 59.936 52.381 4.58 0.00 0.00 2.74
709 717 0.179161 CGCGGAGTTCTTCGATCAGT 60.179 55.000 4.58 0.00 0.00 3.41
710 718 0.098905 TCGCGGAGTTCTTCGATCAG 59.901 55.000 6.13 0.00 0.00 2.90
711 719 0.098905 CTCGCGGAGTTCTTCGATCA 59.901 55.000 6.13 0.00 0.00 2.92
712 720 1.203600 GCTCGCGGAGTTCTTCGATC 61.204 60.000 6.13 0.00 31.39 3.69
713 721 1.226717 GCTCGCGGAGTTCTTCGAT 60.227 57.895 6.13 0.00 31.39 3.59
714 722 2.178521 GCTCGCGGAGTTCTTCGA 59.821 61.111 6.13 0.00 31.39 3.71
715 723 3.241059 CGCTCGCGGAGTTCTTCG 61.241 66.667 6.13 0.00 35.56 3.79
725 733 1.010574 CTCTCTTAGACCGCTCGCG 60.011 63.158 0.00 0.00 39.44 5.87
726 734 0.306533 CTCTCTCTTAGACCGCTCGC 59.693 60.000 0.00 0.00 0.00 5.03
727 735 0.941542 CCTCTCTCTTAGACCGCTCG 59.058 60.000 0.00 0.00 0.00 5.03
728 736 1.944709 GACCTCTCTCTTAGACCGCTC 59.055 57.143 0.00 0.00 0.00 5.03
729 737 1.562475 AGACCTCTCTCTTAGACCGCT 59.438 52.381 0.00 0.00 0.00 5.52
730 738 1.944709 GAGACCTCTCTCTTAGACCGC 59.055 57.143 0.00 0.00 40.09 5.68
731 739 2.159071 TCGAGACCTCTCTCTTAGACCG 60.159 54.545 0.93 0.00 40.96 4.79
732 740 3.118519 ACTCGAGACCTCTCTCTTAGACC 60.119 52.174 21.68 0.00 40.96 3.85
733 741 4.133013 ACTCGAGACCTCTCTCTTAGAC 57.867 50.000 21.68 0.00 40.96 2.59
734 742 4.678574 CGAACTCGAGACCTCTCTCTTAGA 60.679 50.000 21.68 0.00 40.96 2.10
735 743 3.554324 CGAACTCGAGACCTCTCTCTTAG 59.446 52.174 21.68 0.00 40.96 2.18
736 744 3.055963 ACGAACTCGAGACCTCTCTCTTA 60.056 47.826 21.68 0.00 40.96 2.10
737 745 2.289819 ACGAACTCGAGACCTCTCTCTT 60.290 50.000 21.68 0.00 40.96 2.85
738 746 1.276989 ACGAACTCGAGACCTCTCTCT 59.723 52.381 21.68 0.00 40.96 3.10
739 747 1.395608 CACGAACTCGAGACCTCTCTC 59.604 57.143 21.68 2.90 43.02 3.20
740 748 1.270947 ACACGAACTCGAGACCTCTCT 60.271 52.381 21.68 0.00 43.02 3.10
776 784 3.695816 GCTCACTTTGTTGTTTCTCACC 58.304 45.455 0.00 0.00 0.00 4.02
803 811 4.524749 GTTCGCTGTAACTGTTTTTCTCC 58.475 43.478 0.00 0.00 0.00 3.71
833 841 1.402968 TCCAACACTACGTAGATCGGC 59.597 52.381 28.74 0.00 44.69 5.54
855 863 4.988598 ACACGGGTCTTGGCGCAG 62.989 66.667 10.83 0.00 0.00 5.18
866 874 0.884704 CTTCCCAACAGTCACACGGG 60.885 60.000 0.00 0.00 38.34 5.28
876 884 1.595929 GACGAACGCCTTCCCAACA 60.596 57.895 0.00 0.00 0.00 3.33
903 911 0.952984 AGCGAACCTTCTTCAGCAGC 60.953 55.000 0.00 0.00 0.00 5.25
906 914 0.320771 TCCAGCGAACCTTCTTCAGC 60.321 55.000 0.00 0.00 0.00 4.26
910 918 3.695830 TGTTATCCAGCGAACCTTCTT 57.304 42.857 0.00 0.00 0.00 2.52
949 957 0.958382 GTGCTGCCGGGTGATACAAA 60.958 55.000 2.18 0.00 0.00 2.83
2532 15026 0.539669 GAAAACACCCCAGGTCCCAG 60.540 60.000 0.00 0.00 31.02 4.45
2557 15051 9.591792 CATCTAGATGTGAATTAGTCAAACTGA 57.408 33.333 22.42 0.00 38.23 3.41
2585 15079 9.010029 GGGAGTTTAGATGTGACATCTTTAAAA 57.990 33.333 30.49 21.71 0.00 1.52
2587 15081 7.606456 GTGGGAGTTTAGATGTGACATCTTTAA 59.394 37.037 30.49 21.53 0.00 1.52
2588 15082 7.103641 GTGGGAGTTTAGATGTGACATCTTTA 58.896 38.462 30.49 17.45 0.00 1.85
2589 15083 5.940470 GTGGGAGTTTAGATGTGACATCTTT 59.060 40.000 30.49 15.32 0.00 2.52
2590 15084 5.013079 TGTGGGAGTTTAGATGTGACATCTT 59.987 40.000 30.49 14.69 0.00 2.40
2592 15086 4.832248 TGTGGGAGTTTAGATGTGACATC 58.168 43.478 17.46 17.46 0.00 3.06
2593 15087 4.908601 TGTGGGAGTTTAGATGTGACAT 57.091 40.909 0.00 0.00 0.00 3.06
2594 15088 4.698201 TTGTGGGAGTTTAGATGTGACA 57.302 40.909 0.00 0.00 0.00 3.58
2595 15089 7.865706 ATATTTGTGGGAGTTTAGATGTGAC 57.134 36.000 0.00 0.00 0.00 3.67
2604 15098 9.860650 TGCTACATTATATATTTGTGGGAGTTT 57.139 29.630 9.93 0.00 0.00 2.66
2609 15103 9.897744 CTTGTTGCTACATTATATATTTGTGGG 57.102 33.333 0.81 5.64 33.44 4.61
2655 15149 7.122055 TGTTCACTCTGTTTGTGGTCTATTTTT 59.878 33.333 0.00 0.00 36.21 1.94
2656 15150 6.601613 TGTTCACTCTGTTTGTGGTCTATTTT 59.398 34.615 0.00 0.00 36.21 1.82
2660 15154 4.746535 TGTTCACTCTGTTTGTGGTCTA 57.253 40.909 0.00 0.00 36.21 2.59
2662 15156 3.876914 TGATGTTCACTCTGTTTGTGGTC 59.123 43.478 0.00 0.00 36.21 4.02
2663 15157 3.879295 CTGATGTTCACTCTGTTTGTGGT 59.121 43.478 0.00 0.00 36.21 4.16
2668 15162 5.858381 TCTAAGCTGATGTTCACTCTGTTT 58.142 37.500 0.00 0.00 0.00 2.83
2669 15163 5.474578 TCTAAGCTGATGTTCACTCTGTT 57.525 39.130 0.00 0.00 0.00 3.16
2670 15164 5.417811 CATCTAAGCTGATGTTCACTCTGT 58.582 41.667 5.99 0.00 39.05 3.41
2671 15165 5.970140 CATCTAAGCTGATGTTCACTCTG 57.030 43.478 5.99 0.00 39.05 3.35
2680 15174 8.923683 CATAGTTATGTCACATCTAAGCTGATG 58.076 37.037 11.48 11.48 46.61 3.07
2682 15176 8.011844 ACATAGTTATGTCACATCTAAGCTGA 57.988 34.615 0.00 0.00 42.96 4.26
2695 15189 8.217115 CGCATTTAGATGTGACATAGTTATGTC 58.783 37.037 20.26 20.26 44.67 3.06
2696 15190 7.307396 GCGCATTTAGATGTGACATAGTTATGT 60.307 37.037 10.77 4.52 44.67 2.29
2697 15191 7.011773 GCGCATTTAGATGTGACATAGTTATG 58.988 38.462 10.77 2.32 44.67 1.90
2698 15192 7.121974 GCGCATTTAGATGTGACATAGTTAT 57.878 36.000 10.77 0.00 44.67 1.89
2699 15193 6.525121 GCGCATTTAGATGTGACATAGTTA 57.475 37.500 10.77 0.00 44.67 2.24
2707 15201 2.698274 TCTAGGGCGCATTTAGATGTGA 59.302 45.455 10.83 0.00 44.67 3.58
2708 15202 2.802816 GTCTAGGGCGCATTTAGATGTG 59.197 50.000 10.83 2.51 44.69 3.21
2709 15203 2.434336 TGTCTAGGGCGCATTTAGATGT 59.566 45.455 10.83 0.00 35.63 3.06
2710 15204 3.062763 CTGTCTAGGGCGCATTTAGATG 58.937 50.000 10.83 6.67 36.32 2.90
2711 15205 2.965831 TCTGTCTAGGGCGCATTTAGAT 59.034 45.455 10.83 0.00 0.00 1.98
2713 15207 2.101582 AGTCTGTCTAGGGCGCATTTAG 59.898 50.000 10.83 7.74 0.00 1.85
2715 15209 0.905357 AGTCTGTCTAGGGCGCATTT 59.095 50.000 10.83 0.00 0.00 2.32
2716 15210 0.905357 AAGTCTGTCTAGGGCGCATT 59.095 50.000 10.83 0.00 0.00 3.56
2718 15212 0.685097 AAAAGTCTGTCTAGGGCGCA 59.315 50.000 10.83 0.00 0.00 6.09
2719 15213 1.732809 GAAAAAGTCTGTCTAGGGCGC 59.267 52.381 0.00 0.00 0.00 6.53
2720 15214 3.320673 AGAAAAAGTCTGTCTAGGGCG 57.679 47.619 0.00 0.00 34.29 6.13
2721 15215 6.231951 AGTAAAGAAAAAGTCTGTCTAGGGC 58.768 40.000 0.00 0.00 36.40 5.19
2722 15216 8.804204 TCTAGTAAAGAAAAAGTCTGTCTAGGG 58.196 37.037 0.00 0.00 36.40 3.53
2730 15224 9.945904 CCAAGGTATCTAGTAAAGAAAAAGTCT 57.054 33.333 0.00 0.00 37.89 3.24
2732 15226 8.666821 ACCCAAGGTATCTAGTAAAGAAAAAGT 58.333 33.333 0.00 0.00 37.89 2.66
2733 15227 8.947115 CACCCAAGGTATCTAGTAAAGAAAAAG 58.053 37.037 0.00 0.00 33.12 2.27
2734 15228 8.662255 TCACCCAAGGTATCTAGTAAAGAAAAA 58.338 33.333 0.00 0.00 33.12 1.94
2736 15230 7.801893 TCACCCAAGGTATCTAGTAAAGAAA 57.198 36.000 0.00 0.00 33.12 2.52
2737 15231 7.456902 AGTTCACCCAAGGTATCTAGTAAAGAA 59.543 37.037 0.00 0.00 33.12 2.52
2738 15232 6.958192 AGTTCACCCAAGGTATCTAGTAAAGA 59.042 38.462 0.00 0.00 33.73 2.52
2739 15233 7.184067 AGTTCACCCAAGGTATCTAGTAAAG 57.816 40.000 0.00 0.00 32.11 1.85
2743 15237 5.046520 GTCAAGTTCACCCAAGGTATCTAGT 60.047 44.000 0.00 0.00 32.11 2.57
2744 15238 5.046591 TGTCAAGTTCACCCAAGGTATCTAG 60.047 44.000 0.00 0.00 32.11 2.43
2745 15239 4.841813 TGTCAAGTTCACCCAAGGTATCTA 59.158 41.667 0.00 0.00 32.11 1.98
2746 15240 3.650942 TGTCAAGTTCACCCAAGGTATCT 59.349 43.478 0.00 0.00 32.11 1.98
2754 15292 1.472552 CGTGTCTGTCAAGTTCACCCA 60.473 52.381 0.00 0.00 0.00 4.51
2785 15323 5.181622 TCTGTCTTCTACTTCCTCGTTCTTC 59.818 44.000 0.00 0.00 0.00 2.87
2789 15327 4.321378 GCTTCTGTCTTCTACTTCCTCGTT 60.321 45.833 0.00 0.00 0.00 3.85
2804 15416 1.956477 TGAAAAGGCCTTGCTTCTGTC 59.044 47.619 21.33 0.02 0.00 3.51
2853 15465 8.519526 CCCAATATAACCGTGTAATTAATGCAT 58.480 33.333 0.00 0.00 0.00 3.96
2854 15466 7.502895 ACCCAATATAACCGTGTAATTAATGCA 59.497 33.333 0.00 0.00 0.00 3.96
2857 15469 9.729281 CCTACCCAATATAACCGTGTAATTAAT 57.271 33.333 0.00 0.00 0.00 1.40
2858 15470 8.932610 TCCTACCCAATATAACCGTGTAATTAA 58.067 33.333 0.00 0.00 0.00 1.40
2859 15471 8.489676 TCCTACCCAATATAACCGTGTAATTA 57.510 34.615 0.00 0.00 0.00 1.40
2860 15472 7.377696 TCCTACCCAATATAACCGTGTAATT 57.622 36.000 0.00 0.00 0.00 1.40
2861 15473 6.999705 TCCTACCCAATATAACCGTGTAAT 57.000 37.500 0.00 0.00 0.00 1.89
2862 15474 6.999705 ATCCTACCCAATATAACCGTGTAA 57.000 37.500 0.00 0.00 0.00 2.41
2863 15475 6.999705 AATCCTACCCAATATAACCGTGTA 57.000 37.500 0.00 0.00 0.00 2.90
2864 15476 5.899631 AATCCTACCCAATATAACCGTGT 57.100 39.130 0.00 0.00 0.00 4.49
2867 15479 7.996098 ATTGAAATCCTACCCAATATAACCG 57.004 36.000 0.00 0.00 0.00 4.44
2907 15519 9.383519 GTCAAATATCACCTTCTGTTCTAATCA 57.616 33.333 0.00 0.00 0.00 2.57
2908 15520 8.543774 CGTCAAATATCACCTTCTGTTCTAATC 58.456 37.037 0.00 0.00 0.00 1.75
2909 15521 7.011482 GCGTCAAATATCACCTTCTGTTCTAAT 59.989 37.037 0.00 0.00 0.00 1.73
2911 15523 5.810587 GCGTCAAATATCACCTTCTGTTCTA 59.189 40.000 0.00 0.00 0.00 2.10
2913 15525 4.631813 AGCGTCAAATATCACCTTCTGTTC 59.368 41.667 0.00 0.00 0.00 3.18
2914 15526 4.579869 AGCGTCAAATATCACCTTCTGTT 58.420 39.130 0.00 0.00 0.00 3.16
2915 15527 4.207891 AGCGTCAAATATCACCTTCTGT 57.792 40.909 0.00 0.00 0.00 3.41
2916 15528 6.092122 TGTTTAGCGTCAAATATCACCTTCTG 59.908 38.462 0.00 0.00 0.00 3.02
2917 15529 6.170506 TGTTTAGCGTCAAATATCACCTTCT 58.829 36.000 0.00 0.00 0.00 2.85
2918 15530 6.417191 TGTTTAGCGTCAAATATCACCTTC 57.583 37.500 0.00 0.00 0.00 3.46
2919 15531 6.374333 ACATGTTTAGCGTCAAATATCACCTT 59.626 34.615 0.00 0.00 0.00 3.50
2920 15532 5.880332 ACATGTTTAGCGTCAAATATCACCT 59.120 36.000 0.00 0.00 0.00 4.00
2921 15533 6.119144 ACATGTTTAGCGTCAAATATCACC 57.881 37.500 0.00 0.00 0.00 4.02
2922 15534 9.210426 CTTAACATGTTTAGCGTCAAATATCAC 57.790 33.333 17.78 0.00 0.00 3.06
2923 15535 7.908082 GCTTAACATGTTTAGCGTCAAATATCA 59.092 33.333 27.86 0.00 35.86 2.15
2924 15536 8.122952 AGCTTAACATGTTTAGCGTCAAATATC 58.877 33.333 32.29 11.79 46.28 1.63
2925 15537 7.985476 AGCTTAACATGTTTAGCGTCAAATAT 58.015 30.769 32.29 17.09 46.28 1.28
2926 15538 7.333423 AGAGCTTAACATGTTTAGCGTCAAATA 59.667 33.333 32.29 4.79 46.28 1.40
2927 15539 6.149474 AGAGCTTAACATGTTTAGCGTCAAAT 59.851 34.615 32.29 20.22 46.28 2.32
2928 15540 5.468746 AGAGCTTAACATGTTTAGCGTCAAA 59.531 36.000 32.29 13.16 46.28 2.69
2929 15541 4.994852 AGAGCTTAACATGTTTAGCGTCAA 59.005 37.500 32.29 13.78 46.28 3.18
2930 15542 4.566004 AGAGCTTAACATGTTTAGCGTCA 58.434 39.130 32.29 7.31 46.28 4.35
2931 15543 4.625742 TGAGAGCTTAACATGTTTAGCGTC 59.374 41.667 32.29 30.51 46.28 5.19
2932 15544 4.566004 TGAGAGCTTAACATGTTTAGCGT 58.434 39.130 32.29 26.31 46.28 5.07
2933 15545 5.291858 TGATGAGAGCTTAACATGTTTAGCG 59.708 40.000 32.29 14.82 46.28 4.26
2934 15546 6.668541 TGATGAGAGCTTAACATGTTTAGC 57.331 37.500 32.14 32.14 43.28 3.09
2935 15547 8.429493 TGATGATGAGAGCTTAACATGTTTAG 57.571 34.615 17.78 17.96 0.00 1.85
2946 15558 9.979578 CTACTATTACTTTGATGATGAGAGCTT 57.020 33.333 0.00 0.00 0.00 3.74
2991 15603 7.039784 ACAAGTTAAGGCACATGTGATGTATTT 60.040 33.333 29.80 14.16 42.70 1.40
3056 15668 4.214545 CGACAAGTTATGGCACCACTTTTA 59.785 41.667 9.82 0.00 36.57 1.52
3118 15730 3.195002 CCGTGTGGGCAGCATACG 61.195 66.667 6.16 6.16 37.01 3.06
3119 15731 1.815421 CTCCGTGTGGGCAGCATAC 60.815 63.158 0.00 0.00 35.24 2.39
3153 15765 0.392998 CACCTACTGACATGTGGGCC 60.393 60.000 1.15 0.00 41.53 5.80
3164 15776 1.801913 GCGACGCTCACACCTACTG 60.802 63.158 13.73 0.00 0.00 2.74
3176 15788 1.517257 ATCACTAGCACAGCGACGC 60.517 57.895 13.03 13.03 0.00 5.19
3182 15794 1.086067 CACGCCCATCACTAGCACAG 61.086 60.000 0.00 0.00 0.00 3.66
3207 15819 2.050350 CATTCTGGTGGCTGGCCTG 61.050 63.158 13.05 4.26 36.94 4.85
3212 15824 5.934625 GGTAGTATTATCATTCTGGTGGCTG 59.065 44.000 0.00 0.00 0.00 4.85
3217 15829 6.075984 ACGGAGGTAGTATTATCATTCTGGT 58.924 40.000 0.00 0.00 0.00 4.00
3218 15830 6.591750 ACGGAGGTAGTATTATCATTCTGG 57.408 41.667 0.00 0.00 0.00 3.86
3309 15921 8.440833 AGCGAACAATTGTTTATGAAGTACTAC 58.559 33.333 24.02 6.52 38.56 2.73
3310 15922 8.440059 CAGCGAACAATTGTTTATGAAGTACTA 58.560 33.333 24.02 0.00 38.56 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.