Multiple sequence alignment - TraesCS4D01G331400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G331400 chr4D 100.000 3343 0 0 1 3343 489195744 489199086 0.000000e+00 6174
1 TraesCS4D01G331400 chr4D 98.517 1956 21 4 586 2538 47510428 47508478 0.000000e+00 3445
2 TraesCS4D01G331400 chr4D 94.656 1890 61 16 1478 3343 440464491 440462618 0.000000e+00 2894
3 TraesCS4D01G331400 chr4D 88.053 1875 130 50 1519 3341 46606983 46608815 0.000000e+00 2135
4 TraesCS4D01G331400 chr4D 95.759 896 36 2 586 1480 440465455 440464561 0.000000e+00 1443
5 TraesCS4D01G331400 chr5D 97.803 2776 30 7 586 3343 345624932 345627694 0.000000e+00 4759
6 TraesCS4D01G331400 chr5D 95.751 1883 44 10 1478 3343 351321077 351322940 0.000000e+00 3001
7 TraesCS4D01G331400 chr5D 94.965 1569 41 6 1791 3343 443522613 443524159 0.000000e+00 2425
8 TraesCS4D01G331400 chr5D 87.938 1857 134 49 1536 3343 369015714 369013899 0.000000e+00 2106
9 TraesCS4D01G331400 chr5D 95.465 904 37 4 579 1480 443521245 443522146 0.000000e+00 1439
10 TraesCS4D01G331400 chr6D 97.691 2772 39 7 587 3343 441318137 441320898 0.000000e+00 4741
11 TraesCS4D01G331400 chr6D 98.844 1211 13 1 2134 3343 380785113 380786323 0.000000e+00 2158
12 TraesCS4D01G331400 chr7D 98.990 1980 14 2 586 2561 89090800 89088823 0.000000e+00 3541
13 TraesCS4D01G331400 chr7D 95.590 1882 48 8 1479 3343 70680134 70678271 0.000000e+00 2983
14 TraesCS4D01G331400 chr7D 95.539 1883 52 6 1478 3343 596122134 596120267 0.000000e+00 2983
15 TraesCS4D01G331400 chr7D 95.008 1883 52 9 1478 3343 530866493 530864636 0.000000e+00 2918
16 TraesCS4D01G331400 chr7D 95.696 1580 38 8 1780 3343 498406724 498408289 0.000000e+00 2514
17 TraesCS4D01G331400 chr7D 95.307 895 40 2 587 1480 530867456 530866563 0.000000e+00 1419
18 TraesCS4D01G331400 chr7D 99.113 789 6 1 2556 3343 89086646 89085858 0.000000e+00 1417
19 TraesCS4D01G331400 chr7D 94.860 895 45 1 587 1480 11642234 11643128 0.000000e+00 1397
20 TraesCS4D01G331400 chr7D 94.637 895 45 2 587 1480 592400973 592401865 0.000000e+00 1384
21 TraesCS4D01G331400 chr1B 92.193 1883 82 21 1480 3343 591153656 591155492 0.000000e+00 2603
22 TraesCS4D01G331400 chr2D 96.347 1095 23 3 586 1680 639470914 639469837 0.000000e+00 1784
23 TraesCS4D01G331400 chr1D 95.644 1102 23 3 581 1680 71301393 71302471 0.000000e+00 1746
24 TraesCS4D01G331400 chr1D 93.103 493 9 8 2861 3343 71302606 71303083 0.000000e+00 699
25 TraesCS4D01G331400 chr1D 82.546 487 67 8 2857 3343 422097399 422097867 2.400000e-111 412
26 TraesCS4D01G331400 chr4B 90.541 592 39 8 3 594 627541619 627542193 0.000000e+00 767
27 TraesCS4D01G331400 chr7B 87.380 626 35 21 2738 3343 714529427 714528826 0.000000e+00 678
28 TraesCS4D01G331400 chr5A 85.880 602 54 11 5 586 670834155 670834745 2.200000e-171 612


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G331400 chr4D 489195744 489199086 3342 False 6174.0 6174 100.0000 1 3343 1 chr4D.!!$F2 3342
1 TraesCS4D01G331400 chr4D 47508478 47510428 1950 True 3445.0 3445 98.5170 586 2538 1 chr4D.!!$R1 1952
2 TraesCS4D01G331400 chr4D 440462618 440465455 2837 True 2168.5 2894 95.2075 586 3343 2 chr4D.!!$R2 2757
3 TraesCS4D01G331400 chr4D 46606983 46608815 1832 False 2135.0 2135 88.0530 1519 3341 1 chr4D.!!$F1 1822
4 TraesCS4D01G331400 chr5D 345624932 345627694 2762 False 4759.0 4759 97.8030 586 3343 1 chr5D.!!$F1 2757
5 TraesCS4D01G331400 chr5D 351321077 351322940 1863 False 3001.0 3001 95.7510 1478 3343 1 chr5D.!!$F2 1865
6 TraesCS4D01G331400 chr5D 369013899 369015714 1815 True 2106.0 2106 87.9380 1536 3343 1 chr5D.!!$R1 1807
7 TraesCS4D01G331400 chr5D 443521245 443524159 2914 False 1932.0 2425 95.2150 579 3343 2 chr5D.!!$F3 2764
8 TraesCS4D01G331400 chr6D 441318137 441320898 2761 False 4741.0 4741 97.6910 587 3343 1 chr6D.!!$F2 2756
9 TraesCS4D01G331400 chr6D 380785113 380786323 1210 False 2158.0 2158 98.8440 2134 3343 1 chr6D.!!$F1 1209
10 TraesCS4D01G331400 chr7D 70678271 70680134 1863 True 2983.0 2983 95.5900 1479 3343 1 chr7D.!!$R1 1864
11 TraesCS4D01G331400 chr7D 596120267 596122134 1867 True 2983.0 2983 95.5390 1478 3343 1 chr7D.!!$R2 1865
12 TraesCS4D01G331400 chr7D 498406724 498408289 1565 False 2514.0 2514 95.6960 1780 3343 1 chr7D.!!$F2 1563
13 TraesCS4D01G331400 chr7D 89085858 89090800 4942 True 2479.0 3541 99.0515 586 3343 2 chr7D.!!$R3 2757
14 TraesCS4D01G331400 chr7D 530864636 530867456 2820 True 2168.5 2918 95.1575 587 3343 2 chr7D.!!$R4 2756
15 TraesCS4D01G331400 chr7D 11642234 11643128 894 False 1397.0 1397 94.8600 587 1480 1 chr7D.!!$F1 893
16 TraesCS4D01G331400 chr7D 592400973 592401865 892 False 1384.0 1384 94.6370 587 1480 1 chr7D.!!$F3 893
17 TraesCS4D01G331400 chr1B 591153656 591155492 1836 False 2603.0 2603 92.1930 1480 3343 1 chr1B.!!$F1 1863
18 TraesCS4D01G331400 chr2D 639469837 639470914 1077 True 1784.0 1784 96.3470 586 1680 1 chr2D.!!$R1 1094
19 TraesCS4D01G331400 chr1D 71301393 71303083 1690 False 1222.5 1746 94.3735 581 3343 2 chr1D.!!$F2 2762
20 TraesCS4D01G331400 chr4B 627541619 627542193 574 False 767.0 767 90.5410 3 594 1 chr4B.!!$F1 591
21 TraesCS4D01G331400 chr7B 714528826 714529427 601 True 678.0 678 87.3800 2738 3343 1 chr7B.!!$R1 605
22 TraesCS4D01G331400 chr5A 670834155 670834745 590 False 612.0 612 85.8800 5 586 1 chr5A.!!$F1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.03563 AAGCAGATGCCAGTCTGACC 60.036 55.0 13.21 0.0 46.77 4.02 F
386 387 0.03601 CCTACCTGCTCAACCACTGG 60.036 60.0 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1041 1048 4.706476 TGAGGATCCATTGAAACCATGTTC 59.294 41.667 15.82 0.00 0.0 3.18 R
2922 5623 6.765989 TCAGTTACTTCAGTGCACTAATGTTT 59.234 34.615 21.20 4.61 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.950395 GCTGAGTGAAGCCTATTTCCAAT 59.050 43.478 0.00 0.00 37.20 3.16
26 27 5.126067 GCTGAGTGAAGCCTATTTCCAATA 58.874 41.667 0.00 0.00 37.20 1.90
27 28 5.590259 GCTGAGTGAAGCCTATTTCCAATAA 59.410 40.000 0.00 0.00 37.20 1.40
28 29 6.264067 GCTGAGTGAAGCCTATTTCCAATAAT 59.736 38.462 0.00 0.00 37.20 1.28
29 30 7.572523 TGAGTGAAGCCTATTTCCAATAATG 57.427 36.000 0.00 0.00 0.00 1.90
51 52 6.513806 TGGAAATGTTGTGTGATTATCTGG 57.486 37.500 0.00 0.00 0.00 3.86
52 53 5.105797 TGGAAATGTTGTGTGATTATCTGGC 60.106 40.000 0.00 0.00 0.00 4.85
53 54 5.126061 GGAAATGTTGTGTGATTATCTGGCT 59.874 40.000 0.00 0.00 0.00 4.75
54 55 5.571784 AATGTTGTGTGATTATCTGGCTG 57.428 39.130 0.00 0.00 0.00 4.85
55 56 4.019792 TGTTGTGTGATTATCTGGCTGT 57.980 40.909 0.00 0.00 0.00 4.40
56 57 4.002982 TGTTGTGTGATTATCTGGCTGTC 58.997 43.478 0.00 0.00 0.00 3.51
57 58 3.979101 TGTGTGATTATCTGGCTGTCA 57.021 42.857 0.00 0.00 0.00 3.58
58 59 4.284829 TGTGTGATTATCTGGCTGTCAA 57.715 40.909 0.00 0.00 0.00 3.18
59 60 4.002982 TGTGTGATTATCTGGCTGTCAAC 58.997 43.478 0.00 0.00 0.00 3.18
60 61 4.256920 GTGTGATTATCTGGCTGTCAACT 58.743 43.478 0.00 0.00 0.00 3.16
61 62 5.046663 TGTGTGATTATCTGGCTGTCAACTA 60.047 40.000 0.00 0.00 0.00 2.24
62 63 5.874810 GTGTGATTATCTGGCTGTCAACTAA 59.125 40.000 0.00 0.00 0.00 2.24
63 64 6.540189 GTGTGATTATCTGGCTGTCAACTAAT 59.460 38.462 0.00 0.00 0.00 1.73
64 65 7.066284 GTGTGATTATCTGGCTGTCAACTAATT 59.934 37.037 0.00 0.00 0.00 1.40
65 66 7.066163 TGTGATTATCTGGCTGTCAACTAATTG 59.934 37.037 0.00 0.00 37.14 2.32
66 67 5.818136 TTATCTGGCTGTCAACTAATTGC 57.182 39.130 0.00 0.00 35.63 3.56
67 68 3.423539 TCTGGCTGTCAACTAATTGCT 57.576 42.857 0.00 0.00 35.63 3.91
68 69 3.754965 TCTGGCTGTCAACTAATTGCTT 58.245 40.909 0.00 0.00 35.63 3.91
69 70 3.753272 TCTGGCTGTCAACTAATTGCTTC 59.247 43.478 0.00 0.00 35.63 3.86
70 71 3.485394 TGGCTGTCAACTAATTGCTTCA 58.515 40.909 0.00 0.00 35.63 3.02
71 72 3.888323 TGGCTGTCAACTAATTGCTTCAA 59.112 39.130 0.00 0.00 35.63 2.69
72 73 4.340666 TGGCTGTCAACTAATTGCTTCAAA 59.659 37.500 0.00 0.00 35.63 2.69
73 74 5.010922 TGGCTGTCAACTAATTGCTTCAAAT 59.989 36.000 0.00 0.00 35.63 2.32
74 75 5.346822 GGCTGTCAACTAATTGCTTCAAATG 59.653 40.000 0.00 0.00 35.63 2.32
75 76 5.922544 GCTGTCAACTAATTGCTTCAAATGT 59.077 36.000 0.00 0.00 35.63 2.71
76 77 6.129009 GCTGTCAACTAATTGCTTCAAATGTG 60.129 38.462 0.00 0.00 35.63 3.21
77 78 6.804677 TGTCAACTAATTGCTTCAAATGTGT 58.195 32.000 0.00 0.00 35.63 3.72
78 79 6.696583 TGTCAACTAATTGCTTCAAATGTGTG 59.303 34.615 0.00 0.00 35.63 3.82
79 80 6.917477 GTCAACTAATTGCTTCAAATGTGTGA 59.083 34.615 0.00 0.00 35.63 3.58
80 81 7.434897 GTCAACTAATTGCTTCAAATGTGTGAA 59.565 33.333 0.00 0.00 35.63 3.18
81 82 7.434897 TCAACTAATTGCTTCAAATGTGTGAAC 59.565 33.333 0.00 0.00 35.63 3.18
82 83 6.804677 ACTAATTGCTTCAAATGTGTGAACA 58.195 32.000 0.00 0.00 33.92 3.18
83 84 7.436118 ACTAATTGCTTCAAATGTGTGAACAT 58.564 30.769 0.00 0.00 33.92 2.71
84 85 8.575589 ACTAATTGCTTCAAATGTGTGAACATA 58.424 29.630 0.00 0.00 33.92 2.29
85 86 9.409312 CTAATTGCTTCAAATGTGTGAACATAA 57.591 29.630 0.00 0.00 33.92 1.90
86 87 8.836268 AATTGCTTCAAATGTGTGAACATAAT 57.164 26.923 0.00 0.00 33.92 1.28
87 88 9.926158 AATTGCTTCAAATGTGTGAACATAATA 57.074 25.926 0.00 0.00 33.92 0.98
89 90 9.571810 TTGCTTCAAATGTGTGAACATAATATC 57.428 29.630 0.00 0.00 33.92 1.63
90 91 8.190122 TGCTTCAAATGTGTGAACATAATATCC 58.810 33.333 0.00 0.00 33.92 2.59
91 92 7.649306 GCTTCAAATGTGTGAACATAATATCCC 59.351 37.037 0.00 0.00 33.92 3.85
92 93 8.586879 TTCAAATGTGTGAACATAATATCCCA 57.413 30.769 0.00 0.00 32.56 4.37
93 94 7.995289 TCAAATGTGTGAACATAATATCCCAC 58.005 34.615 0.00 0.00 0.00 4.61
94 95 6.959639 AATGTGTGAACATAATATCCCACC 57.040 37.500 0.00 0.00 0.00 4.61
95 96 5.708736 TGTGTGAACATAATATCCCACCT 57.291 39.130 0.00 0.00 0.00 4.00
96 97 5.436175 TGTGTGAACATAATATCCCACCTG 58.564 41.667 0.00 0.00 0.00 4.00
97 98 5.045213 TGTGTGAACATAATATCCCACCTGT 60.045 40.000 0.00 0.00 0.00 4.00
98 99 6.157123 TGTGTGAACATAATATCCCACCTGTA 59.843 38.462 0.00 0.00 0.00 2.74
99 100 7.051623 GTGTGAACATAATATCCCACCTGTAA 58.948 38.462 0.00 0.00 0.00 2.41
100 101 7.012044 GTGTGAACATAATATCCCACCTGTAAC 59.988 40.741 0.00 0.00 0.00 2.50
101 102 7.051623 GTGAACATAATATCCCACCTGTAACA 58.948 38.462 0.00 0.00 0.00 2.41
102 103 7.012044 GTGAACATAATATCCCACCTGTAACAC 59.988 40.741 0.00 0.00 0.00 3.32
103 104 6.824958 ACATAATATCCCACCTGTAACACT 57.175 37.500 0.00 0.00 0.00 3.55
104 105 7.208064 ACATAATATCCCACCTGTAACACTT 57.792 36.000 0.00 0.00 0.00 3.16
105 106 7.639378 ACATAATATCCCACCTGTAACACTTT 58.361 34.615 0.00 0.00 0.00 2.66
106 107 7.556275 ACATAATATCCCACCTGTAACACTTTG 59.444 37.037 0.00 0.00 0.00 2.77
107 108 1.975660 TCCCACCTGTAACACTTTGC 58.024 50.000 0.00 0.00 0.00 3.68
108 109 0.958822 CCCACCTGTAACACTTTGCC 59.041 55.000 0.00 0.00 0.00 4.52
109 110 1.478654 CCCACCTGTAACACTTTGCCT 60.479 52.381 0.00 0.00 0.00 4.75
110 111 2.306847 CCACCTGTAACACTTTGCCTT 58.693 47.619 0.00 0.00 0.00 4.35
111 112 3.482436 CCACCTGTAACACTTTGCCTTA 58.518 45.455 0.00 0.00 0.00 2.69
112 113 3.252458 CCACCTGTAACACTTTGCCTTAC 59.748 47.826 0.00 0.00 0.00 2.34
113 114 3.252458 CACCTGTAACACTTTGCCTTACC 59.748 47.826 0.00 0.00 0.00 2.85
114 115 2.482721 CCTGTAACACTTTGCCTTACCG 59.517 50.000 0.00 0.00 0.00 4.02
115 116 3.395639 CTGTAACACTTTGCCTTACCGA 58.604 45.455 0.00 0.00 0.00 4.69
116 117 4.000988 CTGTAACACTTTGCCTTACCGAT 58.999 43.478 0.00 0.00 0.00 4.18
117 118 3.998341 TGTAACACTTTGCCTTACCGATC 59.002 43.478 0.00 0.00 0.00 3.69
118 119 3.418684 AACACTTTGCCTTACCGATCT 57.581 42.857 0.00 0.00 0.00 2.75
119 120 2.699954 ACACTTTGCCTTACCGATCTG 58.300 47.619 0.00 0.00 0.00 2.90
120 121 2.038557 ACACTTTGCCTTACCGATCTGT 59.961 45.455 0.00 0.00 0.00 3.41
121 122 3.074412 CACTTTGCCTTACCGATCTGTT 58.926 45.455 0.00 0.00 0.00 3.16
122 123 3.502211 CACTTTGCCTTACCGATCTGTTT 59.498 43.478 0.00 0.00 0.00 2.83
123 124 4.023193 CACTTTGCCTTACCGATCTGTTTT 60.023 41.667 0.00 0.00 0.00 2.43
124 125 4.215613 ACTTTGCCTTACCGATCTGTTTTC 59.784 41.667 0.00 0.00 0.00 2.29
125 126 3.695830 TGCCTTACCGATCTGTTTTCT 57.304 42.857 0.00 0.00 0.00 2.52
126 127 4.811969 TGCCTTACCGATCTGTTTTCTA 57.188 40.909 0.00 0.00 0.00 2.10
127 128 4.501071 TGCCTTACCGATCTGTTTTCTAC 58.499 43.478 0.00 0.00 0.00 2.59
128 129 4.020928 TGCCTTACCGATCTGTTTTCTACA 60.021 41.667 0.00 0.00 34.95 2.74
140 141 5.362556 TGTTTTCTACAGAAAGCAGATGC 57.637 39.130 14.81 0.00 45.70 3.91
141 142 4.216257 TGTTTTCTACAGAAAGCAGATGCC 59.784 41.667 14.81 0.00 45.70 4.40
142 143 3.701205 TTCTACAGAAAGCAGATGCCA 57.299 42.857 0.14 0.00 43.38 4.92
143 144 3.257469 TCTACAGAAAGCAGATGCCAG 57.743 47.619 0.14 0.00 43.38 4.85
144 145 2.568956 TCTACAGAAAGCAGATGCCAGT 59.431 45.455 0.14 0.00 43.38 4.00
145 146 1.818642 ACAGAAAGCAGATGCCAGTC 58.181 50.000 0.14 0.00 43.38 3.51
146 147 1.350351 ACAGAAAGCAGATGCCAGTCT 59.650 47.619 0.14 0.00 43.38 3.24
147 148 1.738350 CAGAAAGCAGATGCCAGTCTG 59.262 52.381 12.70 12.70 46.59 3.51
148 149 1.627329 AGAAAGCAGATGCCAGTCTGA 59.373 47.619 13.21 0.00 46.77 3.27
149 150 1.736681 GAAAGCAGATGCCAGTCTGAC 59.263 52.381 13.21 0.00 46.77 3.51
150 151 0.035630 AAGCAGATGCCAGTCTGACC 60.036 55.000 13.21 0.00 46.77 4.02
151 152 1.451028 GCAGATGCCAGTCTGACCC 60.451 63.158 13.21 0.00 46.77 4.46
152 153 1.985614 CAGATGCCAGTCTGACCCA 59.014 57.895 3.76 0.09 46.77 4.51
153 154 0.325933 CAGATGCCAGTCTGACCCAA 59.674 55.000 3.76 0.00 46.77 4.12
154 155 1.067295 AGATGCCAGTCTGACCCAAA 58.933 50.000 3.76 0.00 0.00 3.28
155 156 1.425066 AGATGCCAGTCTGACCCAAAA 59.575 47.619 3.76 0.00 0.00 2.44
156 157 2.042162 AGATGCCAGTCTGACCCAAAAT 59.958 45.455 3.76 0.00 0.00 1.82
157 158 1.909700 TGCCAGTCTGACCCAAAATC 58.090 50.000 3.76 0.00 0.00 2.17
158 159 1.425066 TGCCAGTCTGACCCAAAATCT 59.575 47.619 3.76 0.00 0.00 2.40
159 160 2.642311 TGCCAGTCTGACCCAAAATCTA 59.358 45.455 3.76 0.00 0.00 1.98
160 161 3.073798 TGCCAGTCTGACCCAAAATCTAA 59.926 43.478 3.76 0.00 0.00 2.10
161 162 3.440522 GCCAGTCTGACCCAAAATCTAAC 59.559 47.826 3.76 0.00 0.00 2.34
162 163 4.651778 CCAGTCTGACCCAAAATCTAACA 58.348 43.478 3.76 0.00 0.00 2.41
163 164 4.697352 CCAGTCTGACCCAAAATCTAACAG 59.303 45.833 3.76 0.00 0.00 3.16
164 165 4.697352 CAGTCTGACCCAAAATCTAACAGG 59.303 45.833 3.76 0.00 0.00 4.00
165 166 3.440522 GTCTGACCCAAAATCTAACAGGC 59.559 47.826 0.00 0.00 0.00 4.85
166 167 3.073798 TCTGACCCAAAATCTAACAGGCA 59.926 43.478 0.00 0.00 0.00 4.75
167 168 4.019174 CTGACCCAAAATCTAACAGGCAT 58.981 43.478 0.00 0.00 0.00 4.40
168 169 4.415596 TGACCCAAAATCTAACAGGCATT 58.584 39.130 0.00 0.00 0.00 3.56
169 170 4.462483 TGACCCAAAATCTAACAGGCATTC 59.538 41.667 0.00 0.00 0.00 2.67
170 171 4.677182 ACCCAAAATCTAACAGGCATTCT 58.323 39.130 0.00 0.00 0.00 2.40
171 172 5.086621 ACCCAAAATCTAACAGGCATTCTT 58.913 37.500 0.00 0.00 0.00 2.52
172 173 5.047092 ACCCAAAATCTAACAGGCATTCTTG 60.047 40.000 0.00 0.00 0.00 3.02
173 174 5.413499 CCAAAATCTAACAGGCATTCTTGG 58.587 41.667 0.00 0.00 0.00 3.61
174 175 5.185635 CCAAAATCTAACAGGCATTCTTGGA 59.814 40.000 0.00 0.00 33.03 3.53
175 176 6.127253 CCAAAATCTAACAGGCATTCTTGGAT 60.127 38.462 0.00 0.00 33.03 3.41
176 177 6.461110 AAATCTAACAGGCATTCTTGGATG 57.539 37.500 0.00 0.00 0.00 3.51
177 178 3.889815 TCTAACAGGCATTCTTGGATGG 58.110 45.455 0.00 0.00 0.00 3.51
178 179 2.610438 AACAGGCATTCTTGGATGGT 57.390 45.000 0.00 0.00 0.00 3.55
179 180 1.843368 ACAGGCATTCTTGGATGGTG 58.157 50.000 0.00 0.00 0.00 4.17
180 181 0.458669 CAGGCATTCTTGGATGGTGC 59.541 55.000 0.00 0.00 35.17 5.01
181 182 0.040058 AGGCATTCTTGGATGGTGCA 59.960 50.000 0.00 0.00 37.53 4.57
182 183 0.458669 GGCATTCTTGGATGGTGCAG 59.541 55.000 0.00 0.00 37.53 4.41
183 184 0.458669 GCATTCTTGGATGGTGCAGG 59.541 55.000 0.00 0.00 35.93 4.85
184 185 1.956636 GCATTCTTGGATGGTGCAGGA 60.957 52.381 0.00 0.00 35.93 3.86
185 186 2.449464 CATTCTTGGATGGTGCAGGAA 58.551 47.619 0.00 0.00 38.08 3.36
186 187 2.673775 TTCTTGGATGGTGCAGGAAA 57.326 45.000 0.00 0.00 31.46 3.13
187 188 2.905415 TCTTGGATGGTGCAGGAAAT 57.095 45.000 0.00 0.00 0.00 2.17
188 189 4.314522 TTCTTGGATGGTGCAGGAAATA 57.685 40.909 0.00 0.00 31.46 1.40
189 190 4.524802 TCTTGGATGGTGCAGGAAATAT 57.475 40.909 0.00 0.00 0.00 1.28
190 191 4.870636 TCTTGGATGGTGCAGGAAATATT 58.129 39.130 0.00 0.00 0.00 1.28
191 192 4.889409 TCTTGGATGGTGCAGGAAATATTC 59.111 41.667 0.00 0.00 0.00 1.75
205 206 4.679662 GAAATATTCCAGGAAGACGACGA 58.320 43.478 8.20 0.00 0.00 4.20
206 207 3.992260 ATATTCCAGGAAGACGACGAG 57.008 47.619 8.20 0.00 0.00 4.18
207 208 1.835494 ATTCCAGGAAGACGACGAGA 58.165 50.000 8.20 0.00 0.00 4.04
208 209 1.612676 TTCCAGGAAGACGACGAGAA 58.387 50.000 0.00 0.00 0.00 2.87
209 210 1.166129 TCCAGGAAGACGACGAGAAG 58.834 55.000 0.00 0.00 0.00 2.85
210 211 0.456995 CCAGGAAGACGACGAGAAGC 60.457 60.000 0.00 0.00 0.00 3.86
211 212 0.523966 CAGGAAGACGACGAGAAGCT 59.476 55.000 0.00 0.00 0.00 3.74
212 213 0.523966 AGGAAGACGACGAGAAGCTG 59.476 55.000 0.00 0.00 0.00 4.24
213 214 0.522180 GGAAGACGACGAGAAGCTGA 59.478 55.000 0.00 0.00 0.00 4.26
214 215 1.068472 GGAAGACGACGAGAAGCTGAA 60.068 52.381 0.00 0.00 0.00 3.02
215 216 2.607282 GGAAGACGACGAGAAGCTGAAA 60.607 50.000 0.00 0.00 0.00 2.69
216 217 3.246619 GAAGACGACGAGAAGCTGAAAT 58.753 45.455 0.00 0.00 0.00 2.17
217 218 2.869897 AGACGACGAGAAGCTGAAATC 58.130 47.619 0.00 0.00 0.00 2.17
218 219 1.921230 GACGACGAGAAGCTGAAATCC 59.079 52.381 0.00 0.00 0.00 3.01
219 220 1.281899 CGACGAGAAGCTGAAATCCC 58.718 55.000 0.00 0.00 0.00 3.85
220 221 1.134965 CGACGAGAAGCTGAAATCCCT 60.135 52.381 0.00 0.00 0.00 4.20
221 222 2.099263 CGACGAGAAGCTGAAATCCCTA 59.901 50.000 0.00 0.00 0.00 3.53
222 223 3.428999 CGACGAGAAGCTGAAATCCCTAA 60.429 47.826 0.00 0.00 0.00 2.69
223 224 4.504858 GACGAGAAGCTGAAATCCCTAAA 58.495 43.478 0.00 0.00 0.00 1.85
224 225 4.508662 ACGAGAAGCTGAAATCCCTAAAG 58.491 43.478 0.00 0.00 0.00 1.85
225 226 3.873952 CGAGAAGCTGAAATCCCTAAAGG 59.126 47.826 0.00 0.00 0.00 3.11
235 236 1.584724 TCCCTAAAGGAAGAGCTGGG 58.415 55.000 0.00 0.00 43.78 4.45
236 237 0.106967 CCCTAAAGGAAGAGCTGGGC 60.107 60.000 0.00 0.00 38.24 5.36
237 238 0.462759 CCTAAAGGAAGAGCTGGGCG 60.463 60.000 0.00 0.00 37.39 6.13
238 239 0.537188 CTAAAGGAAGAGCTGGGCGA 59.463 55.000 0.00 0.00 0.00 5.54
239 240 0.537188 TAAAGGAAGAGCTGGGCGAG 59.463 55.000 0.00 0.00 0.00 5.03
240 241 1.194781 AAAGGAAGAGCTGGGCGAGA 61.195 55.000 0.00 0.00 0.00 4.04
241 242 1.194781 AAGGAAGAGCTGGGCGAGAA 61.195 55.000 0.00 0.00 0.00 2.87
242 243 1.153469 GGAAGAGCTGGGCGAGAAG 60.153 63.158 0.00 0.00 0.00 2.85
243 244 1.153469 GAAGAGCTGGGCGAGAAGG 60.153 63.158 0.00 0.00 0.00 3.46
244 245 3.322318 AAGAGCTGGGCGAGAAGGC 62.322 63.158 0.00 0.00 45.91 4.35
263 264 3.458579 CGCGACGTCGTGGTGAAG 61.459 66.667 36.83 17.34 45.14 3.02
264 265 3.103911 GCGACGTCGTGGTGAAGG 61.104 66.667 35.48 8.32 42.22 3.46
265 266 3.103911 CGACGTCGTGGTGAAGGC 61.104 66.667 29.08 0.00 34.11 4.35
266 267 2.737376 GACGTCGTGGTGAAGGCC 60.737 66.667 0.63 0.00 0.00 5.19
267 268 4.309950 ACGTCGTGGTGAAGGCCC 62.310 66.667 0.00 0.00 0.00 5.80
268 269 4.003788 CGTCGTGGTGAAGGCCCT 62.004 66.667 0.00 0.00 0.00 5.19
269 270 2.430367 GTCGTGGTGAAGGCCCTT 59.570 61.111 0.00 0.00 0.00 3.95
270 271 1.966451 GTCGTGGTGAAGGCCCTTG 60.966 63.158 0.00 0.00 0.00 3.61
271 272 2.113139 CGTGGTGAAGGCCCTTGT 59.887 61.111 0.00 0.00 0.00 3.16
272 273 1.966451 CGTGGTGAAGGCCCTTGTC 60.966 63.158 0.00 0.00 0.00 3.18
273 274 1.966451 GTGGTGAAGGCCCTTGTCG 60.966 63.158 0.00 0.00 0.00 4.35
274 275 2.144078 TGGTGAAGGCCCTTGTCGA 61.144 57.895 0.00 0.00 0.00 4.20
275 276 1.376037 GGTGAAGGCCCTTGTCGAG 60.376 63.158 0.00 0.00 0.00 4.04
276 277 1.671742 GTGAAGGCCCTTGTCGAGA 59.328 57.895 0.00 0.00 0.00 4.04
277 278 0.250513 GTGAAGGCCCTTGTCGAGAT 59.749 55.000 0.00 0.00 0.00 2.75
278 279 1.480954 GTGAAGGCCCTTGTCGAGATA 59.519 52.381 0.00 0.00 0.00 1.98
279 280 2.093658 GTGAAGGCCCTTGTCGAGATAA 60.094 50.000 0.00 0.00 0.00 1.75
280 281 2.569853 TGAAGGCCCTTGTCGAGATAAA 59.430 45.455 0.00 0.00 0.00 1.40
281 282 2.693267 AGGCCCTTGTCGAGATAAAC 57.307 50.000 0.00 0.00 0.00 2.01
282 283 1.134788 AGGCCCTTGTCGAGATAAACG 60.135 52.381 0.00 0.00 0.00 3.60
283 284 1.134907 GGCCCTTGTCGAGATAAACGA 60.135 52.381 0.00 0.00 37.43 3.85
284 285 2.194271 GCCCTTGTCGAGATAAACGAG 58.806 52.381 0.00 0.00 40.37 4.18
285 286 2.416972 GCCCTTGTCGAGATAAACGAGT 60.417 50.000 0.00 0.00 40.37 4.18
286 287 3.181493 GCCCTTGTCGAGATAAACGAGTA 60.181 47.826 0.00 0.00 40.37 2.59
287 288 4.349501 CCCTTGTCGAGATAAACGAGTAC 58.650 47.826 0.00 0.00 40.37 2.73
288 289 4.142534 CCCTTGTCGAGATAAACGAGTACA 60.143 45.833 0.00 0.00 40.37 2.90
289 290 5.396484 CCTTGTCGAGATAAACGAGTACAA 58.604 41.667 0.00 0.00 40.37 2.41
290 291 5.285607 CCTTGTCGAGATAAACGAGTACAAC 59.714 44.000 0.00 0.00 40.37 3.32
291 292 4.726416 TGTCGAGATAAACGAGTACAACC 58.274 43.478 0.00 0.00 40.37 3.77
292 293 4.101235 GTCGAGATAAACGAGTACAACCC 58.899 47.826 0.00 0.00 40.37 4.11
293 294 3.103738 CGAGATAAACGAGTACAACCCG 58.896 50.000 0.00 0.00 0.00 5.28
294 295 3.181507 CGAGATAAACGAGTACAACCCGA 60.182 47.826 0.00 0.00 0.00 5.14
295 296 4.349501 GAGATAAACGAGTACAACCCGAG 58.650 47.826 0.00 0.00 0.00 4.63
296 297 2.352503 TAAACGAGTACAACCCGAGC 57.647 50.000 0.00 0.00 0.00 5.03
297 298 0.665369 AAACGAGTACAACCCGAGCG 60.665 55.000 0.00 0.00 0.00 5.03
298 299 2.202570 CGAGTACAACCCGAGCGG 60.203 66.667 1.06 1.06 37.81 5.52
299 300 2.508663 GAGTACAACCCGAGCGGC 60.509 66.667 2.79 0.00 33.26 6.53
300 301 4.078516 AGTACAACCCGAGCGGCC 62.079 66.667 2.79 0.00 33.26 6.13
329 330 3.957260 CGTGAGCTGTGGAACCTG 58.043 61.111 0.00 0.00 34.36 4.00
330 331 1.367471 CGTGAGCTGTGGAACCTGA 59.633 57.895 0.00 0.00 34.36 3.86
331 332 0.249868 CGTGAGCTGTGGAACCTGAA 60.250 55.000 0.00 0.00 34.36 3.02
332 333 1.517242 GTGAGCTGTGGAACCTGAAG 58.483 55.000 0.00 0.00 34.36 3.02
333 334 0.397941 TGAGCTGTGGAACCTGAAGG 59.602 55.000 0.00 0.00 42.17 3.46
334 335 0.687354 GAGCTGTGGAACCTGAAGGA 59.313 55.000 2.62 0.00 38.94 3.36
335 336 0.689623 AGCTGTGGAACCTGAAGGAG 59.310 55.000 2.62 0.00 38.94 3.69
336 337 0.687354 GCTGTGGAACCTGAAGGAGA 59.313 55.000 2.62 0.00 38.94 3.71
337 338 1.072331 GCTGTGGAACCTGAAGGAGAA 59.928 52.381 2.62 0.00 38.94 2.87
338 339 2.772287 CTGTGGAACCTGAAGGAGAAC 58.228 52.381 2.62 0.00 38.94 3.01
339 340 1.420138 TGTGGAACCTGAAGGAGAACC 59.580 52.381 2.62 1.78 38.94 3.62
340 341 0.685097 TGGAACCTGAAGGAGAACCG 59.315 55.000 2.62 0.00 41.83 4.44
341 342 0.036294 GGAACCTGAAGGAGAACCGG 60.036 60.000 0.00 0.00 41.83 5.28
342 343 0.974383 GAACCTGAAGGAGAACCGGA 59.026 55.000 9.46 0.00 41.83 5.14
343 344 0.977395 AACCTGAAGGAGAACCGGAG 59.023 55.000 9.46 0.00 41.83 4.63
344 345 0.114560 ACCTGAAGGAGAACCGGAGA 59.885 55.000 9.46 0.00 41.83 3.71
345 346 0.820871 CCTGAAGGAGAACCGGAGAG 59.179 60.000 9.46 0.00 41.83 3.20
346 347 0.174617 CTGAAGGAGAACCGGAGAGC 59.825 60.000 9.46 0.00 41.83 4.09
347 348 1.139947 GAAGGAGAACCGGAGAGCG 59.860 63.158 9.46 0.00 41.83 5.03
348 349 2.892542 GAAGGAGAACCGGAGAGCGC 62.893 65.000 9.46 0.00 41.83 5.92
349 350 4.516195 GGAGAACCGGAGAGCGCC 62.516 72.222 9.46 1.12 0.00 6.53
358 359 4.135153 GAGAGCGCCGCTGGAAGA 62.135 66.667 20.07 0.00 39.88 2.87
359 360 4.140599 AGAGCGCCGCTGGAAGAG 62.141 66.667 20.07 0.00 39.88 2.85
379 380 3.077907 GGTGGCCTACCTGCTCAA 58.922 61.111 14.93 0.00 46.51 3.02
380 381 1.377333 GGTGGCCTACCTGCTCAAC 60.377 63.158 14.93 0.00 46.51 3.18
381 382 1.377333 GTGGCCTACCTGCTCAACC 60.377 63.158 3.32 0.00 36.63 3.77
382 383 1.845664 TGGCCTACCTGCTCAACCA 60.846 57.895 3.32 0.00 36.63 3.67
383 384 1.377333 GGCCTACCTGCTCAACCAC 60.377 63.158 0.00 0.00 0.00 4.16
384 385 1.679898 GCCTACCTGCTCAACCACT 59.320 57.895 0.00 0.00 0.00 4.00
385 386 0.674895 GCCTACCTGCTCAACCACTG 60.675 60.000 0.00 0.00 0.00 3.66
386 387 0.036010 CCTACCTGCTCAACCACTGG 60.036 60.000 0.00 0.00 0.00 4.00
387 388 0.976641 CTACCTGCTCAACCACTGGA 59.023 55.000 0.71 0.00 0.00 3.86
388 389 1.347707 CTACCTGCTCAACCACTGGAA 59.652 52.381 0.71 0.00 0.00 3.53
389 390 0.109342 ACCTGCTCAACCACTGGAAG 59.891 55.000 0.71 0.00 42.29 3.46
390 391 0.397941 CCTGCTCAACCACTGGAAGA 59.602 55.000 0.71 0.00 37.43 2.87
391 392 1.202806 CCTGCTCAACCACTGGAAGAA 60.203 52.381 0.71 0.00 37.43 2.52
392 393 2.149578 CTGCTCAACCACTGGAAGAAG 58.850 52.381 0.71 0.00 37.43 2.85
393 394 1.768275 TGCTCAACCACTGGAAGAAGA 59.232 47.619 0.71 0.00 37.43 2.87
394 395 2.172505 TGCTCAACCACTGGAAGAAGAA 59.827 45.455 0.71 0.00 37.43 2.52
395 396 2.550180 GCTCAACCACTGGAAGAAGAAC 59.450 50.000 0.71 0.00 37.43 3.01
396 397 3.808728 CTCAACCACTGGAAGAAGAACA 58.191 45.455 0.71 0.00 37.43 3.18
397 398 4.199310 CTCAACCACTGGAAGAAGAACAA 58.801 43.478 0.71 0.00 37.43 2.83
398 399 4.199310 TCAACCACTGGAAGAAGAACAAG 58.801 43.478 0.71 0.00 37.43 3.16
399 400 4.080582 TCAACCACTGGAAGAAGAACAAGA 60.081 41.667 0.71 0.00 37.43 3.02
400 401 4.503714 ACCACTGGAAGAAGAACAAGAA 57.496 40.909 0.71 0.00 37.43 2.52
401 402 4.200092 ACCACTGGAAGAAGAACAAGAAC 58.800 43.478 0.71 0.00 37.43 3.01
402 403 4.199310 CCACTGGAAGAAGAACAAGAACA 58.801 43.478 0.00 0.00 37.43 3.18
403 404 4.640201 CCACTGGAAGAAGAACAAGAACAA 59.360 41.667 0.00 0.00 37.43 2.83
404 405 5.220931 CCACTGGAAGAAGAACAAGAACAAG 60.221 44.000 0.00 0.00 37.43 3.16
405 406 5.586243 CACTGGAAGAAGAACAAGAACAAGA 59.414 40.000 0.00 0.00 37.43 3.02
406 407 6.094048 CACTGGAAGAAGAACAAGAACAAGAA 59.906 38.462 0.00 0.00 37.43 2.52
407 408 6.317391 ACTGGAAGAAGAACAAGAACAAGAAG 59.683 38.462 0.00 0.00 37.43 2.85
408 409 5.590259 TGGAAGAAGAACAAGAACAAGAAGG 59.410 40.000 0.00 0.00 0.00 3.46
409 410 5.506483 GGAAGAAGAACAAGAACAAGAAGGC 60.506 44.000 0.00 0.00 0.00 4.35
410 411 3.885901 AGAAGAACAAGAACAAGAAGGCC 59.114 43.478 0.00 0.00 0.00 5.19
411 412 3.584733 AGAACAAGAACAAGAAGGCCT 57.415 42.857 0.00 0.00 0.00 5.19
412 413 3.903467 AGAACAAGAACAAGAAGGCCTT 58.097 40.909 20.65 20.65 34.91 4.35
413 414 3.885901 AGAACAAGAACAAGAAGGCCTTC 59.114 43.478 34.25 34.25 39.78 3.46
426 427 5.672421 GAAGGCCTTCTACTAACTAACCA 57.328 43.478 33.98 0.00 36.69 3.67
427 428 6.236558 GAAGGCCTTCTACTAACTAACCAT 57.763 41.667 33.98 0.00 36.69 3.55
428 429 5.615925 AGGCCTTCTACTAACTAACCATG 57.384 43.478 0.00 0.00 0.00 3.66
429 430 4.409247 AGGCCTTCTACTAACTAACCATGG 59.591 45.833 11.19 11.19 0.00 3.66
430 431 4.127907 GCCTTCTACTAACTAACCATGGC 58.872 47.826 13.04 0.00 0.00 4.40
431 432 4.141688 GCCTTCTACTAACTAACCATGGCT 60.142 45.833 13.04 0.95 33.45 4.75
432 433 5.360591 CCTTCTACTAACTAACCATGGCTG 58.639 45.833 13.04 4.56 0.00 4.85
433 434 5.104900 CCTTCTACTAACTAACCATGGCTGT 60.105 44.000 13.04 5.28 0.00 4.40
434 435 6.368779 TTCTACTAACTAACCATGGCTGTT 57.631 37.500 13.04 16.07 0.00 3.16
435 436 7.364408 CCTTCTACTAACTAACCATGGCTGTTA 60.364 40.741 13.04 16.32 0.00 2.41
436 437 7.484993 TCTACTAACTAACCATGGCTGTTAA 57.515 36.000 13.04 4.38 0.00 2.01
437 438 8.086143 TCTACTAACTAACCATGGCTGTTAAT 57.914 34.615 13.04 10.89 0.00 1.40
438 439 7.985184 TCTACTAACTAACCATGGCTGTTAATG 59.015 37.037 13.04 9.92 0.00 1.90
439 440 6.717289 ACTAACTAACCATGGCTGTTAATGA 58.283 36.000 13.04 0.00 0.00 2.57
440 441 6.823689 ACTAACTAACCATGGCTGTTAATGAG 59.176 38.462 13.04 10.50 0.00 2.90
441 442 5.179452 ACTAACCATGGCTGTTAATGAGT 57.821 39.130 13.04 0.00 0.00 3.41
442 443 5.570320 ACTAACCATGGCTGTTAATGAGTT 58.430 37.500 13.04 0.00 0.00 3.01
443 444 5.648092 ACTAACCATGGCTGTTAATGAGTTC 59.352 40.000 13.04 0.00 0.00 3.01
444 445 4.032960 ACCATGGCTGTTAATGAGTTCA 57.967 40.909 13.04 0.00 0.00 3.18
445 446 4.012374 ACCATGGCTGTTAATGAGTTCAG 58.988 43.478 13.04 0.00 0.00 3.02
446 447 4.012374 CCATGGCTGTTAATGAGTTCAGT 58.988 43.478 0.00 0.00 0.00 3.41
447 448 5.185454 CCATGGCTGTTAATGAGTTCAGTA 58.815 41.667 0.00 0.00 0.00 2.74
448 449 5.065218 CCATGGCTGTTAATGAGTTCAGTAC 59.935 44.000 0.00 0.00 0.00 2.73
449 450 4.575885 TGGCTGTTAATGAGTTCAGTACC 58.424 43.478 0.00 0.00 0.00 3.34
450 451 4.286032 TGGCTGTTAATGAGTTCAGTACCT 59.714 41.667 0.00 0.00 0.00 3.08
451 452 5.221843 TGGCTGTTAATGAGTTCAGTACCTT 60.222 40.000 0.00 0.00 0.00 3.50
452 453 5.351740 GGCTGTTAATGAGTTCAGTACCTTC 59.648 44.000 0.00 0.00 0.00 3.46
453 454 5.062308 GCTGTTAATGAGTTCAGTACCTTCG 59.938 44.000 0.00 0.00 0.00 3.79
454 455 6.092955 TGTTAATGAGTTCAGTACCTTCGT 57.907 37.500 0.00 0.00 0.00 3.85
455 456 5.924254 TGTTAATGAGTTCAGTACCTTCGTG 59.076 40.000 0.00 0.00 0.00 4.35
456 457 4.866508 AATGAGTTCAGTACCTTCGTGA 57.133 40.909 0.00 0.00 0.00 4.35
457 458 3.637998 TGAGTTCAGTACCTTCGTGAC 57.362 47.619 0.00 0.00 0.00 3.67
458 459 2.295349 TGAGTTCAGTACCTTCGTGACC 59.705 50.000 0.00 0.00 0.00 4.02
459 460 2.557490 GAGTTCAGTACCTTCGTGACCT 59.443 50.000 0.00 0.00 0.00 3.85
460 461 3.755378 GAGTTCAGTACCTTCGTGACCTA 59.245 47.826 0.00 0.00 0.00 3.08
461 462 4.147321 AGTTCAGTACCTTCGTGACCTAA 58.853 43.478 0.00 0.00 0.00 2.69
462 463 4.586001 AGTTCAGTACCTTCGTGACCTAAA 59.414 41.667 0.00 0.00 0.00 1.85
463 464 4.510038 TCAGTACCTTCGTGACCTAAAC 57.490 45.455 0.00 0.00 0.00 2.01
464 465 4.147321 TCAGTACCTTCGTGACCTAAACT 58.853 43.478 0.00 0.00 0.00 2.66
465 466 4.217118 TCAGTACCTTCGTGACCTAAACTC 59.783 45.833 0.00 0.00 0.00 3.01
466 467 3.509184 AGTACCTTCGTGACCTAAACTCC 59.491 47.826 0.00 0.00 0.00 3.85
467 468 1.622312 ACCTTCGTGACCTAAACTCCC 59.378 52.381 0.00 0.00 0.00 4.30
468 469 1.900486 CCTTCGTGACCTAAACTCCCT 59.100 52.381 0.00 0.00 0.00 4.20
469 470 2.094130 CCTTCGTGACCTAAACTCCCTC 60.094 54.545 0.00 0.00 0.00 4.30
470 471 1.553706 TCGTGACCTAAACTCCCTCC 58.446 55.000 0.00 0.00 0.00 4.30
471 472 1.076677 TCGTGACCTAAACTCCCTCCT 59.923 52.381 0.00 0.00 0.00 3.69
472 473 1.204941 CGTGACCTAAACTCCCTCCTG 59.795 57.143 0.00 0.00 0.00 3.86
473 474 1.066071 GTGACCTAAACTCCCTCCTGC 60.066 57.143 0.00 0.00 0.00 4.85
474 475 1.276622 GACCTAAACTCCCTCCTGCA 58.723 55.000 0.00 0.00 0.00 4.41
475 476 1.208293 GACCTAAACTCCCTCCTGCAG 59.792 57.143 6.78 6.78 0.00 4.41
476 477 1.203313 ACCTAAACTCCCTCCTGCAGA 60.203 52.381 17.39 0.00 0.00 4.26
477 478 1.909302 CCTAAACTCCCTCCTGCAGAA 59.091 52.381 17.39 0.00 0.00 3.02
478 479 2.093235 CCTAAACTCCCTCCTGCAGAAG 60.093 54.545 17.39 3.25 0.00 2.85
479 480 1.734655 AAACTCCCTCCTGCAGAAGA 58.265 50.000 17.39 3.59 0.00 2.87
480 481 1.734655 AACTCCCTCCTGCAGAAGAA 58.265 50.000 17.39 0.00 0.00 2.52
481 482 1.963985 ACTCCCTCCTGCAGAAGAAT 58.036 50.000 17.39 0.00 0.00 2.40
482 483 2.273619 ACTCCCTCCTGCAGAAGAATT 58.726 47.619 17.39 0.00 0.00 2.17
483 484 3.454858 ACTCCCTCCTGCAGAAGAATTA 58.545 45.455 17.39 0.00 0.00 1.40
484 485 4.043596 ACTCCCTCCTGCAGAAGAATTAT 58.956 43.478 17.39 0.00 0.00 1.28
485 486 4.102367 ACTCCCTCCTGCAGAAGAATTATC 59.898 45.833 17.39 0.00 0.00 1.75
486 487 3.392616 TCCCTCCTGCAGAAGAATTATCC 59.607 47.826 17.39 0.00 0.00 2.59
487 488 3.137176 CCCTCCTGCAGAAGAATTATCCA 59.863 47.826 17.39 0.00 0.00 3.41
488 489 4.385643 CCCTCCTGCAGAAGAATTATCCAA 60.386 45.833 17.39 0.00 0.00 3.53
489 490 5.383476 CCTCCTGCAGAAGAATTATCCAAT 58.617 41.667 17.39 0.00 0.00 3.16
490 491 5.241064 CCTCCTGCAGAAGAATTATCCAATG 59.759 44.000 17.39 0.00 0.00 2.82
491 492 5.759059 TCCTGCAGAAGAATTATCCAATGT 58.241 37.500 17.39 0.00 0.00 2.71
492 493 6.189859 TCCTGCAGAAGAATTATCCAATGTT 58.810 36.000 17.39 0.00 0.00 2.71
493 494 6.664816 TCCTGCAGAAGAATTATCCAATGTTT 59.335 34.615 17.39 0.00 0.00 2.83
494 495 6.976925 CCTGCAGAAGAATTATCCAATGTTTC 59.023 38.462 17.39 0.00 0.00 2.78
495 496 7.147949 CCTGCAGAAGAATTATCCAATGTTTCT 60.148 37.037 17.39 0.00 32.23 2.52
496 497 8.125978 TGCAGAAGAATTATCCAATGTTTCTT 57.874 30.769 0.00 0.00 38.86 2.52
497 498 8.587608 TGCAGAAGAATTATCCAATGTTTCTTT 58.412 29.630 0.00 0.00 36.91 2.52
498 499 9.428097 GCAGAAGAATTATCCAATGTTTCTTTT 57.572 29.630 0.00 0.00 36.91 2.27
506 507 9.880157 ATTATCCAATGTTTCTTTTTCATGAGG 57.120 29.630 0.00 0.00 0.00 3.86
507 508 6.975196 TCCAATGTTTCTTTTTCATGAGGA 57.025 33.333 0.00 0.00 0.00 3.71
508 509 6.985117 TCCAATGTTTCTTTTTCATGAGGAG 58.015 36.000 0.00 0.00 0.00 3.69
509 510 6.550854 TCCAATGTTTCTTTTTCATGAGGAGT 59.449 34.615 0.00 0.00 0.00 3.85
510 511 7.723616 TCCAATGTTTCTTTTTCATGAGGAGTA 59.276 33.333 0.00 0.00 0.00 2.59
511 512 8.359642 CCAATGTTTCTTTTTCATGAGGAGTAA 58.640 33.333 0.00 0.00 0.00 2.24
512 513 9.185192 CAATGTTTCTTTTTCATGAGGAGTAAC 57.815 33.333 13.01 13.01 0.00 2.50
513 514 8.697507 ATGTTTCTTTTTCATGAGGAGTAACT 57.302 30.769 17.18 0.00 0.00 2.24
514 515 9.793259 ATGTTTCTTTTTCATGAGGAGTAACTA 57.207 29.630 17.18 9.82 0.00 2.24
515 516 9.273016 TGTTTCTTTTTCATGAGGAGTAACTAG 57.727 33.333 17.18 0.00 0.00 2.57
516 517 9.274206 GTTTCTTTTTCATGAGGAGTAACTAGT 57.726 33.333 0.00 0.00 0.00 2.57
520 521 9.930693 CTTTTTCATGAGGAGTAACTAGTAAGT 57.069 33.333 0.00 0.00 37.65 2.24
521 522 9.924650 TTTTTCATGAGGAGTAACTAGTAAGTC 57.075 33.333 0.00 0.00 33.75 3.01
522 523 8.880991 TTTCATGAGGAGTAACTAGTAAGTCT 57.119 34.615 0.00 0.00 33.75 3.24
523 524 8.880991 TTCATGAGGAGTAACTAGTAAGTCTT 57.119 34.615 0.00 0.00 33.75 3.01
524 525 8.282455 TCATGAGGAGTAACTAGTAAGTCTTG 57.718 38.462 0.00 0.00 33.75 3.02
525 526 6.512342 TGAGGAGTAACTAGTAAGTCTTGC 57.488 41.667 0.00 0.00 33.75 4.01
526 527 5.123502 TGAGGAGTAACTAGTAAGTCTTGCG 59.876 44.000 0.00 0.00 33.75 4.85
527 528 5.008980 AGGAGTAACTAGTAAGTCTTGCGT 58.991 41.667 0.00 0.00 33.75 5.24
528 529 6.176183 AGGAGTAACTAGTAAGTCTTGCGTA 58.824 40.000 0.00 0.00 33.75 4.42
529 530 6.827762 AGGAGTAACTAGTAAGTCTTGCGTAT 59.172 38.462 0.00 0.00 33.75 3.06
530 531 6.911511 GGAGTAACTAGTAAGTCTTGCGTATG 59.088 42.308 0.00 0.00 33.75 2.39
531 532 7.201679 GGAGTAACTAGTAAGTCTTGCGTATGA 60.202 40.741 0.00 0.00 33.75 2.15
532 533 8.048534 AGTAACTAGTAAGTCTTGCGTATGAA 57.951 34.615 0.00 0.00 33.75 2.57
533 534 8.684520 AGTAACTAGTAAGTCTTGCGTATGAAT 58.315 33.333 0.00 0.00 33.75 2.57
534 535 9.298774 GTAACTAGTAAGTCTTGCGTATGAATT 57.701 33.333 7.21 7.21 33.75 2.17
549 550 9.758651 TGCGTATGAATTATTAATACTCACTGT 57.241 29.630 9.92 0.00 0.00 3.55
562 563 9.607988 TTAATACTCACTGTTTTGAAGAGTTCA 57.392 29.630 0.00 0.00 39.92 3.18
563 564 8.682936 AATACTCACTGTTTTGAAGAGTTCAT 57.317 30.769 0.00 0.00 39.84 2.57
564 565 6.369059 ACTCACTGTTTTGAAGAGTTCATG 57.631 37.500 0.00 0.00 39.84 3.07
565 566 6.115446 ACTCACTGTTTTGAAGAGTTCATGA 58.885 36.000 0.00 0.00 39.84 3.07
566 567 6.769822 ACTCACTGTTTTGAAGAGTTCATGAT 59.230 34.615 0.00 0.00 39.84 2.45
567 568 7.284034 ACTCACTGTTTTGAAGAGTTCATGATT 59.716 33.333 0.00 0.00 39.84 2.57
568 569 7.420002 TCACTGTTTTGAAGAGTTCATGATTG 58.580 34.615 0.00 0.00 39.84 2.67
569 570 6.639686 CACTGTTTTGAAGAGTTCATGATTGG 59.360 38.462 0.00 0.00 39.84 3.16
570 571 6.088016 TGTTTTGAAGAGTTCATGATTGGG 57.912 37.500 0.00 0.00 39.84 4.12
571 572 5.832595 TGTTTTGAAGAGTTCATGATTGGGA 59.167 36.000 0.00 0.00 39.84 4.37
572 573 5.964958 TTTGAAGAGTTCATGATTGGGAC 57.035 39.130 0.00 0.00 39.84 4.46
573 574 4.639078 TGAAGAGTTCATGATTGGGACA 57.361 40.909 0.00 0.00 34.08 4.02
574 575 5.183530 TGAAGAGTTCATGATTGGGACAT 57.816 39.130 0.00 0.00 33.81 3.06
575 576 5.573219 TGAAGAGTTCATGATTGGGACATT 58.427 37.500 0.00 0.00 33.81 2.71
576 577 6.012113 TGAAGAGTTCATGATTGGGACATTT 58.988 36.000 0.00 0.00 33.81 2.32
577 578 5.909621 AGAGTTCATGATTGGGACATTTG 57.090 39.130 0.00 0.00 39.30 2.32
578 579 5.573219 AGAGTTCATGATTGGGACATTTGA 58.427 37.500 0.00 0.00 39.30 2.69
579 580 5.651139 AGAGTTCATGATTGGGACATTTGAG 59.349 40.000 0.00 0.00 39.30 3.02
580 581 5.573219 AGTTCATGATTGGGACATTTGAGA 58.427 37.500 0.00 0.00 39.30 3.27
581 582 6.012113 AGTTCATGATTGGGACATTTGAGAA 58.988 36.000 0.00 0.00 39.30 2.87
582 583 6.494491 AGTTCATGATTGGGACATTTGAGAAA 59.506 34.615 0.00 0.00 39.30 2.52
583 584 6.914654 TCATGATTGGGACATTTGAGAAAA 57.085 33.333 0.00 0.00 39.30 2.29
584 585 7.300556 TCATGATTGGGACATTTGAGAAAAA 57.699 32.000 0.00 0.00 39.30 1.94
1041 1048 1.064946 GAGCTCGGACGAGGACATG 59.935 63.158 21.57 0.00 42.19 3.21
2922 5623 4.931661 AAGTTCAGGACTGACGAAACTA 57.068 40.909 0.67 0.00 39.66 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.685427 CCAGATAATCACACAACATTTCCATTA 58.315 33.333 0.00 0.00 0.00 1.90
26 27 7.549839 CCAGATAATCACACAACATTTCCATT 58.450 34.615 0.00 0.00 0.00 3.16
27 28 6.406177 GCCAGATAATCACACAACATTTCCAT 60.406 38.462 0.00 0.00 0.00 3.41
28 29 5.105797 GCCAGATAATCACACAACATTTCCA 60.106 40.000 0.00 0.00 0.00 3.53
29 30 5.126061 AGCCAGATAATCACACAACATTTCC 59.874 40.000 0.00 0.00 0.00 3.13
30 31 6.032094 CAGCCAGATAATCACACAACATTTC 58.968 40.000 0.00 0.00 0.00 2.17
31 32 5.477984 ACAGCCAGATAATCACACAACATTT 59.522 36.000 0.00 0.00 0.00 2.32
32 33 5.012239 ACAGCCAGATAATCACACAACATT 58.988 37.500 0.00 0.00 0.00 2.71
33 34 4.592942 ACAGCCAGATAATCACACAACAT 58.407 39.130 0.00 0.00 0.00 2.71
34 35 4.002982 GACAGCCAGATAATCACACAACA 58.997 43.478 0.00 0.00 0.00 3.33
35 36 4.002982 TGACAGCCAGATAATCACACAAC 58.997 43.478 0.00 0.00 0.00 3.32
36 37 4.284829 TGACAGCCAGATAATCACACAA 57.715 40.909 0.00 0.00 0.00 3.33
37 38 3.979101 TGACAGCCAGATAATCACACA 57.021 42.857 0.00 0.00 0.00 3.72
38 39 4.256920 AGTTGACAGCCAGATAATCACAC 58.743 43.478 0.00 0.00 0.00 3.82
39 40 4.558226 AGTTGACAGCCAGATAATCACA 57.442 40.909 0.00 0.00 0.00 3.58
40 41 7.412853 CAATTAGTTGACAGCCAGATAATCAC 58.587 38.462 0.00 0.00 37.53 3.06
41 42 6.038603 GCAATTAGTTGACAGCCAGATAATCA 59.961 38.462 1.56 0.00 37.53 2.57
42 43 6.261826 AGCAATTAGTTGACAGCCAGATAATC 59.738 38.462 1.56 0.00 37.53 1.75
43 44 6.125029 AGCAATTAGTTGACAGCCAGATAAT 58.875 36.000 1.56 0.00 37.53 1.28
44 45 5.500234 AGCAATTAGTTGACAGCCAGATAA 58.500 37.500 1.56 0.00 37.53 1.75
45 46 5.102953 AGCAATTAGTTGACAGCCAGATA 57.897 39.130 1.56 0.00 37.53 1.98
46 47 3.960571 AGCAATTAGTTGACAGCCAGAT 58.039 40.909 1.56 0.00 37.53 2.90
47 48 3.423539 AGCAATTAGTTGACAGCCAGA 57.576 42.857 1.56 0.00 37.53 3.86
48 49 3.503363 TGAAGCAATTAGTTGACAGCCAG 59.497 43.478 1.56 0.00 37.53 4.85
49 50 3.485394 TGAAGCAATTAGTTGACAGCCA 58.515 40.909 1.56 0.00 37.53 4.75
50 51 4.503741 TTGAAGCAATTAGTTGACAGCC 57.496 40.909 1.56 0.00 37.53 4.85
51 52 5.922544 ACATTTGAAGCAATTAGTTGACAGC 59.077 36.000 1.56 0.00 37.53 4.40
52 53 6.919662 ACACATTTGAAGCAATTAGTTGACAG 59.080 34.615 1.56 0.00 37.53 3.51
53 54 6.696583 CACACATTTGAAGCAATTAGTTGACA 59.303 34.615 1.56 0.00 37.53 3.58
54 55 6.917477 TCACACATTTGAAGCAATTAGTTGAC 59.083 34.615 1.56 0.00 37.53 3.18
55 56 7.036996 TCACACATTTGAAGCAATTAGTTGA 57.963 32.000 1.56 0.00 37.53 3.18
56 57 7.222417 TGTTCACACATTTGAAGCAATTAGTTG 59.778 33.333 0.00 0.00 36.15 3.16
57 58 7.264221 TGTTCACACATTTGAAGCAATTAGTT 58.736 30.769 0.00 0.00 36.15 2.24
58 59 6.804677 TGTTCACACATTTGAAGCAATTAGT 58.195 32.000 0.00 0.00 36.15 2.24
59 60 7.878477 ATGTTCACACATTTGAAGCAATTAG 57.122 32.000 0.00 0.00 41.16 1.73
60 61 9.926158 ATTATGTTCACACATTTGAAGCAATTA 57.074 25.926 0.00 0.00 41.16 1.40
61 62 8.836268 ATTATGTTCACACATTTGAAGCAATT 57.164 26.923 0.00 0.00 41.16 2.32
63 64 9.571810 GATATTATGTTCACACATTTGAAGCAA 57.428 29.630 0.00 0.00 41.16 3.91
64 65 8.190122 GGATATTATGTTCACACATTTGAAGCA 58.810 33.333 0.00 0.00 41.16 3.91
65 66 7.649306 GGGATATTATGTTCACACATTTGAAGC 59.351 37.037 0.00 0.00 41.16 3.86
66 67 8.685427 TGGGATATTATGTTCACACATTTGAAG 58.315 33.333 0.00 0.00 41.16 3.02
67 68 8.465999 GTGGGATATTATGTTCACACATTTGAA 58.534 33.333 7.27 0.00 44.06 2.69
68 69 7.068103 GGTGGGATATTATGTTCACACATTTGA 59.932 37.037 12.25 0.00 45.97 2.69
69 70 7.068593 AGGTGGGATATTATGTTCACACATTTG 59.931 37.037 12.25 0.00 45.97 2.32
70 71 7.068593 CAGGTGGGATATTATGTTCACACATTT 59.931 37.037 12.25 0.00 45.97 2.32
71 72 6.547141 CAGGTGGGATATTATGTTCACACATT 59.453 38.462 12.25 1.06 45.97 2.71
72 73 6.064060 CAGGTGGGATATTATGTTCACACAT 58.936 40.000 12.25 4.78 45.97 3.21
73 74 5.045213 ACAGGTGGGATATTATGTTCACACA 60.045 40.000 12.25 0.00 45.97 3.72
74 75 5.437060 ACAGGTGGGATATTATGTTCACAC 58.563 41.667 4.45 4.45 43.94 3.82
75 76 5.708736 ACAGGTGGGATATTATGTTCACA 57.291 39.130 0.00 0.00 0.00 3.58
76 77 7.012044 GTGTTACAGGTGGGATATTATGTTCAC 59.988 40.741 0.00 0.00 0.00 3.18
77 78 7.051623 GTGTTACAGGTGGGATATTATGTTCA 58.948 38.462 0.00 0.00 0.00 3.18
78 79 7.280356 AGTGTTACAGGTGGGATATTATGTTC 58.720 38.462 0.00 0.00 0.00 3.18
79 80 7.208064 AGTGTTACAGGTGGGATATTATGTT 57.792 36.000 0.00 0.00 0.00 2.71
80 81 6.824958 AGTGTTACAGGTGGGATATTATGT 57.175 37.500 0.00 0.00 0.00 2.29
81 82 7.468631 GCAAAGTGTTACAGGTGGGATATTATG 60.469 40.741 0.00 0.00 0.00 1.90
82 83 6.546034 GCAAAGTGTTACAGGTGGGATATTAT 59.454 38.462 0.00 0.00 0.00 1.28
83 84 5.883673 GCAAAGTGTTACAGGTGGGATATTA 59.116 40.000 0.00 0.00 0.00 0.98
84 85 4.705023 GCAAAGTGTTACAGGTGGGATATT 59.295 41.667 0.00 0.00 0.00 1.28
85 86 4.270008 GCAAAGTGTTACAGGTGGGATAT 58.730 43.478 0.00 0.00 0.00 1.63
86 87 3.560453 GGCAAAGTGTTACAGGTGGGATA 60.560 47.826 0.00 0.00 0.00 2.59
87 88 2.514803 GCAAAGTGTTACAGGTGGGAT 58.485 47.619 0.00 0.00 0.00 3.85
88 89 1.477923 GGCAAAGTGTTACAGGTGGGA 60.478 52.381 0.00 0.00 0.00 4.37
89 90 0.958822 GGCAAAGTGTTACAGGTGGG 59.041 55.000 0.00 0.00 0.00 4.61
90 91 1.981256 AGGCAAAGTGTTACAGGTGG 58.019 50.000 0.00 0.00 0.00 4.61
91 92 3.252458 GGTAAGGCAAAGTGTTACAGGTG 59.748 47.826 0.00 0.00 0.00 4.00
92 93 3.483421 GGTAAGGCAAAGTGTTACAGGT 58.517 45.455 0.00 0.00 0.00 4.00
93 94 2.482721 CGGTAAGGCAAAGTGTTACAGG 59.517 50.000 0.00 0.00 0.00 4.00
94 95 3.395639 TCGGTAAGGCAAAGTGTTACAG 58.604 45.455 0.00 0.00 0.00 2.74
95 96 3.472283 TCGGTAAGGCAAAGTGTTACA 57.528 42.857 0.00 0.00 0.00 2.41
96 97 4.092968 CAGATCGGTAAGGCAAAGTGTTAC 59.907 45.833 0.00 0.00 0.00 2.50
97 98 4.250464 CAGATCGGTAAGGCAAAGTGTTA 58.750 43.478 0.00 0.00 0.00 2.41
98 99 3.074412 CAGATCGGTAAGGCAAAGTGTT 58.926 45.455 0.00 0.00 0.00 3.32
99 100 2.038557 ACAGATCGGTAAGGCAAAGTGT 59.961 45.455 0.00 0.00 0.00 3.55
100 101 2.699954 ACAGATCGGTAAGGCAAAGTG 58.300 47.619 0.00 0.00 0.00 3.16
101 102 3.418684 AACAGATCGGTAAGGCAAAGT 57.581 42.857 0.00 0.00 0.00 2.66
102 103 4.455877 AGAAAACAGATCGGTAAGGCAAAG 59.544 41.667 0.00 0.00 0.00 2.77
103 104 4.394729 AGAAAACAGATCGGTAAGGCAAA 58.605 39.130 0.00 0.00 0.00 3.68
104 105 4.015872 AGAAAACAGATCGGTAAGGCAA 57.984 40.909 0.00 0.00 0.00 4.52
105 106 3.695830 AGAAAACAGATCGGTAAGGCA 57.304 42.857 0.00 0.00 0.00 4.75
106 107 4.501071 TGTAGAAAACAGATCGGTAAGGC 58.499 43.478 0.00 0.00 33.01 4.35
118 119 4.216257 GGCATCTGCTTTCTGTAGAAAACA 59.784 41.667 8.28 8.86 42.72 2.83
119 120 4.216257 TGGCATCTGCTTTCTGTAGAAAAC 59.784 41.667 8.28 4.95 42.72 2.43
120 121 4.397420 TGGCATCTGCTTTCTGTAGAAAA 58.603 39.130 8.28 0.00 42.72 2.29
121 122 4.005650 CTGGCATCTGCTTTCTGTAGAAA 58.994 43.478 6.85 6.85 40.64 2.52
122 123 3.008375 ACTGGCATCTGCTTTCTGTAGAA 59.992 43.478 1.70 0.00 40.64 2.10
123 124 2.568956 ACTGGCATCTGCTTTCTGTAGA 59.431 45.455 1.70 0.00 41.47 2.59
124 125 2.935201 GACTGGCATCTGCTTTCTGTAG 59.065 50.000 1.70 0.00 41.70 2.74
125 126 2.568956 AGACTGGCATCTGCTTTCTGTA 59.431 45.455 1.70 0.00 41.70 2.74
126 127 1.350351 AGACTGGCATCTGCTTTCTGT 59.650 47.619 1.70 0.00 41.70 3.41
127 128 1.738350 CAGACTGGCATCTGCTTTCTG 59.262 52.381 11.98 7.72 39.77 3.02
128 129 1.627329 TCAGACTGGCATCTGCTTTCT 59.373 47.619 16.98 0.00 44.94 2.52
129 130 1.736681 GTCAGACTGGCATCTGCTTTC 59.263 52.381 16.98 7.92 44.94 2.62
130 131 1.612726 GGTCAGACTGGCATCTGCTTT 60.613 52.381 9.71 0.00 44.94 3.51
131 132 0.035630 GGTCAGACTGGCATCTGCTT 60.036 55.000 9.71 0.00 44.94 3.91
132 133 1.601171 GGTCAGACTGGCATCTGCT 59.399 57.895 9.71 0.00 44.94 4.24
133 134 1.451028 GGGTCAGACTGGCATCTGC 60.451 63.158 9.71 13.21 44.94 4.26
134 135 0.325933 TTGGGTCAGACTGGCATCTG 59.674 55.000 9.71 16.14 46.40 2.90
135 136 1.067295 TTTGGGTCAGACTGGCATCT 58.933 50.000 9.71 0.00 0.00 2.90
136 137 1.909700 TTTTGGGTCAGACTGGCATC 58.090 50.000 9.71 1.04 0.00 3.91
137 138 2.042162 AGATTTTGGGTCAGACTGGCAT 59.958 45.455 9.71 0.00 0.00 4.40
138 139 1.425066 AGATTTTGGGTCAGACTGGCA 59.575 47.619 9.71 0.00 0.00 4.92
139 140 2.206576 AGATTTTGGGTCAGACTGGC 57.793 50.000 1.81 0.00 0.00 4.85
140 141 4.651778 TGTTAGATTTTGGGTCAGACTGG 58.348 43.478 1.81 0.00 0.00 4.00
141 142 4.697352 CCTGTTAGATTTTGGGTCAGACTG 59.303 45.833 0.00 0.00 0.00 3.51
142 143 4.807643 GCCTGTTAGATTTTGGGTCAGACT 60.808 45.833 0.00 0.00 0.00 3.24
143 144 3.440522 GCCTGTTAGATTTTGGGTCAGAC 59.559 47.826 0.00 0.00 0.00 3.51
144 145 3.073798 TGCCTGTTAGATTTTGGGTCAGA 59.926 43.478 0.00 0.00 0.00 3.27
145 146 3.420893 TGCCTGTTAGATTTTGGGTCAG 58.579 45.455 0.00 0.00 0.00 3.51
146 147 3.517296 TGCCTGTTAGATTTTGGGTCA 57.483 42.857 0.00 0.00 0.00 4.02
147 148 4.706962 AGAATGCCTGTTAGATTTTGGGTC 59.293 41.667 0.00 0.00 0.00 4.46
148 149 4.677182 AGAATGCCTGTTAGATTTTGGGT 58.323 39.130 0.00 0.00 0.00 4.51
149 150 5.413499 CAAGAATGCCTGTTAGATTTTGGG 58.587 41.667 0.00 0.00 0.00 4.12
150 151 5.185635 TCCAAGAATGCCTGTTAGATTTTGG 59.814 40.000 0.00 0.00 34.21 3.28
151 152 6.271488 TCCAAGAATGCCTGTTAGATTTTG 57.729 37.500 0.00 0.00 0.00 2.44
152 153 6.127253 CCATCCAAGAATGCCTGTTAGATTTT 60.127 38.462 0.00 0.00 0.00 1.82
153 154 5.361857 CCATCCAAGAATGCCTGTTAGATTT 59.638 40.000 0.00 0.00 0.00 2.17
154 155 4.891756 CCATCCAAGAATGCCTGTTAGATT 59.108 41.667 0.00 0.00 0.00 2.40
155 156 4.079558 ACCATCCAAGAATGCCTGTTAGAT 60.080 41.667 0.00 0.00 0.00 1.98
156 157 3.266772 ACCATCCAAGAATGCCTGTTAGA 59.733 43.478 0.00 0.00 0.00 2.10
157 158 3.379372 CACCATCCAAGAATGCCTGTTAG 59.621 47.826 0.00 0.00 0.00 2.34
158 159 3.355378 CACCATCCAAGAATGCCTGTTA 58.645 45.455 0.00 0.00 0.00 2.41
159 160 2.173519 CACCATCCAAGAATGCCTGTT 58.826 47.619 0.00 0.00 0.00 3.16
160 161 1.843368 CACCATCCAAGAATGCCTGT 58.157 50.000 0.00 0.00 0.00 4.00
161 162 0.458669 GCACCATCCAAGAATGCCTG 59.541 55.000 0.00 0.00 0.00 4.85
162 163 0.040058 TGCACCATCCAAGAATGCCT 59.960 50.000 0.00 0.00 35.37 4.75
163 164 0.458669 CTGCACCATCCAAGAATGCC 59.541 55.000 0.00 0.00 35.37 4.40
164 165 0.458669 CCTGCACCATCCAAGAATGC 59.541 55.000 0.00 0.00 36.81 3.56
165 166 2.133281 TCCTGCACCATCCAAGAATG 57.867 50.000 0.00 0.00 0.00 2.67
166 167 2.905415 TTCCTGCACCATCCAAGAAT 57.095 45.000 0.00 0.00 0.00 2.40
167 168 2.673775 TTTCCTGCACCATCCAAGAA 57.326 45.000 0.00 0.00 0.00 2.52
168 169 2.905415 ATTTCCTGCACCATCCAAGA 57.095 45.000 0.00 0.00 0.00 3.02
169 170 4.038402 GGAATATTTCCTGCACCATCCAAG 59.962 45.833 0.00 0.00 46.57 3.61
170 171 3.960102 GGAATATTTCCTGCACCATCCAA 59.040 43.478 0.00 0.00 46.57 3.53
171 172 3.565307 GGAATATTTCCTGCACCATCCA 58.435 45.455 0.00 0.00 46.57 3.41
183 184 4.679662 TCGTCGTCTTCCTGGAATATTTC 58.320 43.478 10.03 0.92 0.00 2.17
184 185 4.401519 TCTCGTCGTCTTCCTGGAATATTT 59.598 41.667 10.03 0.00 0.00 1.40
185 186 3.952323 TCTCGTCGTCTTCCTGGAATATT 59.048 43.478 10.03 0.00 0.00 1.28
186 187 3.552875 TCTCGTCGTCTTCCTGGAATAT 58.447 45.455 10.03 0.00 0.00 1.28
187 188 2.995283 TCTCGTCGTCTTCCTGGAATA 58.005 47.619 10.03 0.00 0.00 1.75
188 189 1.835494 TCTCGTCGTCTTCCTGGAAT 58.165 50.000 10.03 0.00 0.00 3.01
189 190 1.540267 CTTCTCGTCGTCTTCCTGGAA 59.460 52.381 9.14 9.14 0.00 3.53
190 191 1.166129 CTTCTCGTCGTCTTCCTGGA 58.834 55.000 0.00 0.00 0.00 3.86
191 192 0.456995 GCTTCTCGTCGTCTTCCTGG 60.457 60.000 0.00 0.00 0.00 4.45
192 193 0.523966 AGCTTCTCGTCGTCTTCCTG 59.476 55.000 0.00 0.00 0.00 3.86
193 194 0.523966 CAGCTTCTCGTCGTCTTCCT 59.476 55.000 0.00 0.00 0.00 3.36
194 195 0.522180 TCAGCTTCTCGTCGTCTTCC 59.478 55.000 0.00 0.00 0.00 3.46
195 196 2.333389 TTCAGCTTCTCGTCGTCTTC 57.667 50.000 0.00 0.00 0.00 2.87
196 197 2.795175 TTTCAGCTTCTCGTCGTCTT 57.205 45.000 0.00 0.00 0.00 3.01
197 198 2.416162 GGATTTCAGCTTCTCGTCGTCT 60.416 50.000 0.00 0.00 0.00 4.18
198 199 1.921230 GGATTTCAGCTTCTCGTCGTC 59.079 52.381 0.00 0.00 0.00 4.20
199 200 1.404315 GGGATTTCAGCTTCTCGTCGT 60.404 52.381 0.00 0.00 0.00 4.34
200 201 1.134965 AGGGATTTCAGCTTCTCGTCG 60.135 52.381 0.00 0.00 0.00 5.12
201 202 2.682155 AGGGATTTCAGCTTCTCGTC 57.318 50.000 0.00 0.00 0.00 4.20
202 203 4.508662 CTTTAGGGATTTCAGCTTCTCGT 58.491 43.478 0.00 0.00 0.00 4.18
203 204 3.873952 CCTTTAGGGATTTCAGCTTCTCG 59.126 47.826 0.00 0.00 37.23 4.04
204 205 5.104259 TCCTTTAGGGATTTCAGCTTCTC 57.896 43.478 0.00 0.00 39.58 2.87
205 206 5.251700 TCTTCCTTTAGGGATTTCAGCTTCT 59.748 40.000 0.00 0.00 44.66 2.85
206 207 5.501156 TCTTCCTTTAGGGATTTCAGCTTC 58.499 41.667 0.00 0.00 44.66 3.86
207 208 5.504853 CTCTTCCTTTAGGGATTTCAGCTT 58.495 41.667 0.00 0.00 44.66 3.74
208 209 4.627498 GCTCTTCCTTTAGGGATTTCAGCT 60.627 45.833 0.00 0.00 44.66 4.24
209 210 3.629855 GCTCTTCCTTTAGGGATTTCAGC 59.370 47.826 0.00 0.00 44.66 4.26
210 211 4.880696 CAGCTCTTCCTTTAGGGATTTCAG 59.119 45.833 0.00 0.00 44.66 3.02
211 212 4.324563 CCAGCTCTTCCTTTAGGGATTTCA 60.325 45.833 0.00 0.00 44.66 2.69
212 213 4.203226 CCAGCTCTTCCTTTAGGGATTTC 58.797 47.826 0.00 0.00 44.66 2.17
213 214 3.053320 CCCAGCTCTTCCTTTAGGGATTT 60.053 47.826 0.00 0.00 44.66 2.17
214 215 2.511637 CCCAGCTCTTCCTTTAGGGATT 59.488 50.000 0.00 0.00 44.66 3.01
215 216 2.131023 CCCAGCTCTTCCTTTAGGGAT 58.869 52.381 0.00 0.00 44.66 3.85
216 217 1.584724 CCCAGCTCTTCCTTTAGGGA 58.415 55.000 0.00 0.00 43.41 4.20
217 218 0.106967 GCCCAGCTCTTCCTTTAGGG 60.107 60.000 0.00 0.00 37.87 3.53
218 219 0.462759 CGCCCAGCTCTTCCTTTAGG 60.463 60.000 0.00 0.00 0.00 2.69
219 220 0.537188 TCGCCCAGCTCTTCCTTTAG 59.463 55.000 0.00 0.00 0.00 1.85
220 221 0.537188 CTCGCCCAGCTCTTCCTTTA 59.463 55.000 0.00 0.00 0.00 1.85
221 222 1.194781 TCTCGCCCAGCTCTTCCTTT 61.195 55.000 0.00 0.00 0.00 3.11
222 223 1.194781 TTCTCGCCCAGCTCTTCCTT 61.195 55.000 0.00 0.00 0.00 3.36
223 224 1.610673 TTCTCGCCCAGCTCTTCCT 60.611 57.895 0.00 0.00 0.00 3.36
224 225 1.153469 CTTCTCGCCCAGCTCTTCC 60.153 63.158 0.00 0.00 0.00 3.46
225 226 1.153469 CCTTCTCGCCCAGCTCTTC 60.153 63.158 0.00 0.00 0.00 2.87
226 227 2.985456 CCTTCTCGCCCAGCTCTT 59.015 61.111 0.00 0.00 0.00 2.85
227 228 3.780173 GCCTTCTCGCCCAGCTCT 61.780 66.667 0.00 0.00 0.00 4.09
246 247 3.458579 CTTCACCACGACGTCGCG 61.459 66.667 35.92 27.39 44.43 5.87
247 248 3.103911 CCTTCACCACGACGTCGC 61.104 66.667 35.92 0.00 44.43 5.19
248 249 3.103911 GCCTTCACCACGACGTCG 61.104 66.667 34.58 34.58 46.33 5.12
249 250 2.737376 GGCCTTCACCACGACGTC 60.737 66.667 5.18 5.18 0.00 4.34
250 251 4.309950 GGGCCTTCACCACGACGT 62.310 66.667 0.84 0.00 0.00 4.34
251 252 3.530910 AAGGGCCTTCACCACGACG 62.531 63.158 14.48 0.00 0.00 5.12
252 253 1.966451 CAAGGGCCTTCACCACGAC 60.966 63.158 17.86 0.00 0.00 4.34
253 254 2.391724 GACAAGGGCCTTCACCACGA 62.392 60.000 17.86 0.00 0.00 4.35
254 255 1.966451 GACAAGGGCCTTCACCACG 60.966 63.158 17.86 6.66 0.00 4.94
255 256 1.966451 CGACAAGGGCCTTCACCAC 60.966 63.158 17.86 5.31 0.00 4.16
256 257 2.111999 CTCGACAAGGGCCTTCACCA 62.112 60.000 17.86 1.00 0.00 4.17
257 258 1.376037 CTCGACAAGGGCCTTCACC 60.376 63.158 17.86 7.40 0.00 4.02
258 259 0.250513 ATCTCGACAAGGGCCTTCAC 59.749 55.000 17.86 12.23 0.00 3.18
259 260 1.860641 TATCTCGACAAGGGCCTTCA 58.139 50.000 17.86 0.00 0.00 3.02
260 261 2.937149 GTTTATCTCGACAAGGGCCTTC 59.063 50.000 17.86 5.33 0.00 3.46
261 262 2.677037 CGTTTATCTCGACAAGGGCCTT 60.677 50.000 14.48 14.48 0.00 4.35
262 263 1.134788 CGTTTATCTCGACAAGGGCCT 60.135 52.381 0.00 0.00 0.00 5.19
263 264 1.134907 TCGTTTATCTCGACAAGGGCC 60.135 52.381 0.00 0.00 32.30 5.80
264 265 2.194271 CTCGTTTATCTCGACAAGGGC 58.806 52.381 0.00 0.00 33.71 5.19
265 266 3.505464 ACTCGTTTATCTCGACAAGGG 57.495 47.619 0.00 0.00 33.71 3.95
266 267 4.978186 TGTACTCGTTTATCTCGACAAGG 58.022 43.478 0.00 0.00 33.71 3.61
267 268 5.285607 GGTTGTACTCGTTTATCTCGACAAG 59.714 44.000 0.00 0.00 33.71 3.16
268 269 5.156355 GGTTGTACTCGTTTATCTCGACAA 58.844 41.667 0.00 0.00 33.71 3.18
269 270 4.379813 GGGTTGTACTCGTTTATCTCGACA 60.380 45.833 0.00 0.00 33.71 4.35
270 271 4.101235 GGGTTGTACTCGTTTATCTCGAC 58.899 47.826 0.00 0.00 33.71 4.20
271 272 3.181507 CGGGTTGTACTCGTTTATCTCGA 60.182 47.826 0.00 0.00 37.30 4.04
272 273 3.103738 CGGGTTGTACTCGTTTATCTCG 58.896 50.000 0.00 0.00 37.30 4.04
273 274 4.349501 CTCGGGTTGTACTCGTTTATCTC 58.650 47.826 0.00 0.00 43.79 2.75
274 275 3.428589 GCTCGGGTTGTACTCGTTTATCT 60.429 47.826 0.00 0.00 43.79 1.98
275 276 2.856557 GCTCGGGTTGTACTCGTTTATC 59.143 50.000 0.00 0.00 43.79 1.75
276 277 2.733227 CGCTCGGGTTGTACTCGTTTAT 60.733 50.000 0.00 0.00 43.79 1.40
277 278 1.401409 CGCTCGGGTTGTACTCGTTTA 60.401 52.381 0.00 0.00 43.79 2.01
278 279 0.665369 CGCTCGGGTTGTACTCGTTT 60.665 55.000 0.00 0.00 43.79 3.60
279 280 1.080974 CGCTCGGGTTGTACTCGTT 60.081 57.895 0.00 0.00 43.79 3.85
280 281 2.564975 CGCTCGGGTTGTACTCGT 59.435 61.111 0.00 0.00 43.79 4.18
281 282 2.202570 CCGCTCGGGTTGTACTCG 60.203 66.667 0.00 0.00 44.98 4.18
282 283 2.508663 GCCGCTCGGGTTGTACTC 60.509 66.667 10.57 0.00 38.44 2.59
283 284 4.078516 GGCCGCTCGGGTTGTACT 62.079 66.667 10.57 0.00 38.44 2.73
302 303 4.065281 AGCTCACGCACGGGGTAC 62.065 66.667 0.00 0.00 39.10 3.34
303 304 4.063967 CAGCTCACGCACGGGGTA 62.064 66.667 0.00 0.00 39.10 3.69
307 308 4.662961 TCCACAGCTCACGCACGG 62.663 66.667 0.00 0.00 39.10 4.94
308 309 2.661537 TTCCACAGCTCACGCACG 60.662 61.111 0.00 0.00 39.10 5.34
309 310 2.607892 GGTTCCACAGCTCACGCAC 61.608 63.158 0.00 0.00 39.10 5.34
310 311 2.280797 GGTTCCACAGCTCACGCA 60.281 61.111 0.00 0.00 39.10 5.24
311 312 2.031163 AGGTTCCACAGCTCACGC 59.969 61.111 0.00 0.00 0.00 5.34
312 313 0.249868 TTCAGGTTCCACAGCTCACG 60.250 55.000 0.00 0.00 0.00 4.35
313 314 1.517242 CTTCAGGTTCCACAGCTCAC 58.483 55.000 0.00 0.00 0.00 3.51
314 315 0.397941 CCTTCAGGTTCCACAGCTCA 59.602 55.000 0.00 0.00 0.00 4.26
315 316 0.687354 TCCTTCAGGTTCCACAGCTC 59.313 55.000 0.00 0.00 36.34 4.09
316 317 0.689623 CTCCTTCAGGTTCCACAGCT 59.310 55.000 0.00 0.00 36.34 4.24
317 318 0.687354 TCTCCTTCAGGTTCCACAGC 59.313 55.000 0.00 0.00 36.34 4.40
318 319 2.551071 GGTTCTCCTTCAGGTTCCACAG 60.551 54.545 0.00 0.00 36.34 3.66
319 320 1.420138 GGTTCTCCTTCAGGTTCCACA 59.580 52.381 0.00 0.00 36.34 4.17
320 321 1.608283 CGGTTCTCCTTCAGGTTCCAC 60.608 57.143 0.00 0.00 36.34 4.02
321 322 0.685097 CGGTTCTCCTTCAGGTTCCA 59.315 55.000 0.00 0.00 36.34 3.53
322 323 0.036294 CCGGTTCTCCTTCAGGTTCC 60.036 60.000 0.00 0.00 36.34 3.62
323 324 0.974383 TCCGGTTCTCCTTCAGGTTC 59.026 55.000 0.00 0.00 36.34 3.62
324 325 0.977395 CTCCGGTTCTCCTTCAGGTT 59.023 55.000 0.00 0.00 36.34 3.50
325 326 0.114560 TCTCCGGTTCTCCTTCAGGT 59.885 55.000 0.00 0.00 36.34 4.00
326 327 0.820871 CTCTCCGGTTCTCCTTCAGG 59.179 60.000 0.00 0.00 0.00 3.86
327 328 0.174617 GCTCTCCGGTTCTCCTTCAG 59.825 60.000 0.00 0.00 0.00 3.02
328 329 1.595993 CGCTCTCCGGTTCTCCTTCA 61.596 60.000 0.00 0.00 0.00 3.02
329 330 1.139947 CGCTCTCCGGTTCTCCTTC 59.860 63.158 0.00 0.00 0.00 3.46
330 331 3.007973 GCGCTCTCCGGTTCTCCTT 62.008 63.158 0.00 0.00 37.44 3.36
331 332 3.453679 GCGCTCTCCGGTTCTCCT 61.454 66.667 0.00 0.00 37.44 3.69
332 333 4.516195 GGCGCTCTCCGGTTCTCC 62.516 72.222 7.64 0.00 37.44 3.71
333 334 4.856607 CGGCGCTCTCCGGTTCTC 62.857 72.222 7.64 0.00 45.38 2.87
341 342 4.135153 TCTTCCAGCGGCGCTCTC 62.135 66.667 34.22 1.90 36.40 3.20
342 343 4.140599 CTCTTCCAGCGGCGCTCT 62.141 66.667 34.22 10.30 36.40 4.09
363 364 1.377333 GGTTGAGCAGGTAGGCCAC 60.377 63.158 5.01 0.31 37.19 5.01
364 365 1.845664 TGGTTGAGCAGGTAGGCCA 60.846 57.895 5.01 0.00 37.19 5.36
365 366 1.377333 GTGGTTGAGCAGGTAGGCC 60.377 63.158 0.00 0.00 0.00 5.19
366 367 0.674895 CAGTGGTTGAGCAGGTAGGC 60.675 60.000 0.00 0.00 0.00 3.93
367 368 0.036010 CCAGTGGTTGAGCAGGTAGG 60.036 60.000 0.00 0.00 0.00 3.18
368 369 0.976641 TCCAGTGGTTGAGCAGGTAG 59.023 55.000 9.54 0.00 0.00 3.18
369 370 1.347707 CTTCCAGTGGTTGAGCAGGTA 59.652 52.381 9.54 0.00 0.00 3.08
370 371 0.109342 CTTCCAGTGGTTGAGCAGGT 59.891 55.000 9.54 0.00 0.00 4.00
371 372 0.397941 TCTTCCAGTGGTTGAGCAGG 59.602 55.000 9.54 0.00 0.00 4.85
372 373 2.149578 CTTCTTCCAGTGGTTGAGCAG 58.850 52.381 9.54 2.50 0.00 4.24
373 374 1.768275 TCTTCTTCCAGTGGTTGAGCA 59.232 47.619 9.54 0.00 0.00 4.26
374 375 2.550180 GTTCTTCTTCCAGTGGTTGAGC 59.450 50.000 9.54 0.62 0.00 4.26
375 376 3.808728 TGTTCTTCTTCCAGTGGTTGAG 58.191 45.455 9.54 6.36 0.00 3.02
376 377 3.924114 TGTTCTTCTTCCAGTGGTTGA 57.076 42.857 9.54 5.92 0.00 3.18
377 378 4.199310 TCTTGTTCTTCTTCCAGTGGTTG 58.801 43.478 9.54 3.42 0.00 3.77
378 379 4.503714 TCTTGTTCTTCTTCCAGTGGTT 57.496 40.909 9.54 0.00 0.00 3.67
379 380 4.200092 GTTCTTGTTCTTCTTCCAGTGGT 58.800 43.478 9.54 0.00 0.00 4.16
380 381 4.199310 TGTTCTTGTTCTTCTTCCAGTGG 58.801 43.478 1.40 1.40 0.00 4.00
381 382 5.586243 TCTTGTTCTTGTTCTTCTTCCAGTG 59.414 40.000 0.00 0.00 0.00 3.66
382 383 5.745227 TCTTGTTCTTGTTCTTCTTCCAGT 58.255 37.500 0.00 0.00 0.00 4.00
383 384 6.238593 CCTTCTTGTTCTTGTTCTTCTTCCAG 60.239 42.308 0.00 0.00 0.00 3.86
384 385 5.590259 CCTTCTTGTTCTTGTTCTTCTTCCA 59.410 40.000 0.00 0.00 0.00 3.53
385 386 5.506483 GCCTTCTTGTTCTTGTTCTTCTTCC 60.506 44.000 0.00 0.00 0.00 3.46
386 387 5.506483 GGCCTTCTTGTTCTTGTTCTTCTTC 60.506 44.000 0.00 0.00 0.00 2.87
387 388 4.339530 GGCCTTCTTGTTCTTGTTCTTCTT 59.660 41.667 0.00 0.00 0.00 2.52
388 389 3.885901 GGCCTTCTTGTTCTTGTTCTTCT 59.114 43.478 0.00 0.00 0.00 2.85
389 390 3.885901 AGGCCTTCTTGTTCTTGTTCTTC 59.114 43.478 0.00 0.00 0.00 2.87
390 391 3.903467 AGGCCTTCTTGTTCTTGTTCTT 58.097 40.909 0.00 0.00 0.00 2.52
391 392 3.584733 AGGCCTTCTTGTTCTTGTTCT 57.415 42.857 0.00 0.00 0.00 3.01
392 393 3.885901 AGAAGGCCTTCTTGTTCTTGTTC 59.114 43.478 37.44 12.89 46.95 3.18
393 394 3.903467 AGAAGGCCTTCTTGTTCTTGTT 58.097 40.909 37.44 15.61 46.95 2.83
394 395 3.584733 AGAAGGCCTTCTTGTTCTTGT 57.415 42.857 37.44 16.34 46.95 3.16
395 396 4.646572 AGTAGAAGGCCTTCTTGTTCTTG 58.353 43.478 44.43 0.00 46.95 3.02
396 397 4.984146 AGTAGAAGGCCTTCTTGTTCTT 57.016 40.909 44.43 25.80 46.95 2.52
397 398 5.544562 AGTTAGTAGAAGGCCTTCTTGTTCT 59.455 40.000 44.43 34.52 46.95 3.01
398 399 5.795972 AGTTAGTAGAAGGCCTTCTTGTTC 58.204 41.667 44.43 31.10 46.95 3.18
399 400 5.827326 AGTTAGTAGAAGGCCTTCTTGTT 57.173 39.130 44.43 31.84 46.95 2.83
400 401 6.295745 GGTTAGTTAGTAGAAGGCCTTCTTGT 60.296 42.308 44.43 33.69 46.95 3.16
401 402 6.107343 GGTTAGTTAGTAGAAGGCCTTCTTG 58.893 44.000 44.43 0.00 46.95 3.02
402 403 5.783875 TGGTTAGTTAGTAGAAGGCCTTCTT 59.216 40.000 44.43 32.35 46.95 2.52
404 405 5.672421 TGGTTAGTTAGTAGAAGGCCTTC 57.328 43.478 34.25 34.25 39.78 3.46
405 406 5.104485 CCATGGTTAGTTAGTAGAAGGCCTT 60.104 44.000 20.65 20.65 0.00 4.35
406 407 4.409247 CCATGGTTAGTTAGTAGAAGGCCT 59.591 45.833 0.00 0.00 0.00 5.19
407 408 4.704965 CCATGGTTAGTTAGTAGAAGGCC 58.295 47.826 2.57 0.00 0.00 5.19
408 409 4.127907 GCCATGGTTAGTTAGTAGAAGGC 58.872 47.826 14.67 0.00 0.00 4.35
409 410 5.104900 ACAGCCATGGTTAGTTAGTAGAAGG 60.105 44.000 14.67 0.00 0.00 3.46
410 411 5.978814 ACAGCCATGGTTAGTTAGTAGAAG 58.021 41.667 14.67 0.00 0.00 2.85
411 412 6.368779 AACAGCCATGGTTAGTTAGTAGAA 57.631 37.500 14.67 0.00 0.00 2.10
412 413 7.484993 TTAACAGCCATGGTTAGTTAGTAGA 57.515 36.000 14.67 3.00 32.76 2.59
413 414 7.985184 TCATTAACAGCCATGGTTAGTTAGTAG 59.015 37.037 14.67 12.15 32.76 2.57
414 415 7.853299 TCATTAACAGCCATGGTTAGTTAGTA 58.147 34.615 14.67 6.75 32.76 1.82
415 416 6.717289 TCATTAACAGCCATGGTTAGTTAGT 58.283 36.000 14.67 13.03 32.76 2.24
416 417 6.823689 ACTCATTAACAGCCATGGTTAGTTAG 59.176 38.462 14.67 11.49 32.76 2.34
417 418 6.717289 ACTCATTAACAGCCATGGTTAGTTA 58.283 36.000 14.67 15.92 32.76 2.24
418 419 5.570320 ACTCATTAACAGCCATGGTTAGTT 58.430 37.500 14.67 16.88 32.76 2.24
419 420 5.179452 ACTCATTAACAGCCATGGTTAGT 57.821 39.130 14.67 6.82 32.76 2.24
420 421 5.647658 TGAACTCATTAACAGCCATGGTTAG 59.352 40.000 14.67 6.14 32.76 2.34
421 422 5.565509 TGAACTCATTAACAGCCATGGTTA 58.434 37.500 14.67 1.01 0.00 2.85
422 423 4.406456 TGAACTCATTAACAGCCATGGTT 58.594 39.130 14.67 3.81 0.00 3.67
423 424 4.012374 CTGAACTCATTAACAGCCATGGT 58.988 43.478 14.67 0.00 0.00 3.55
424 425 4.012374 ACTGAACTCATTAACAGCCATGG 58.988 43.478 7.63 7.63 34.25 3.66
425 426 5.065218 GGTACTGAACTCATTAACAGCCATG 59.935 44.000 0.00 0.00 34.25 3.66
426 427 5.045578 AGGTACTGAACTCATTAACAGCCAT 60.046 40.000 0.00 0.00 37.18 4.40
427 428 4.286032 AGGTACTGAACTCATTAACAGCCA 59.714 41.667 0.00 0.00 37.18 4.75
428 429 4.833390 AGGTACTGAACTCATTAACAGCC 58.167 43.478 0.00 0.00 37.18 4.85
429 430 5.062308 CGAAGGTACTGAACTCATTAACAGC 59.938 44.000 0.00 0.00 40.86 4.40
430 431 6.089551 CACGAAGGTACTGAACTCATTAACAG 59.910 42.308 0.00 0.00 40.86 3.16
431 432 5.924254 CACGAAGGTACTGAACTCATTAACA 59.076 40.000 0.00 0.00 40.86 2.41
432 433 6.089150 GTCACGAAGGTACTGAACTCATTAAC 59.911 42.308 0.00 0.00 40.86 2.01
433 434 6.154445 GTCACGAAGGTACTGAACTCATTAA 58.846 40.000 0.00 0.00 40.86 1.40
434 435 5.336213 GGTCACGAAGGTACTGAACTCATTA 60.336 44.000 0.00 0.00 40.86 1.90
435 436 4.557205 GTCACGAAGGTACTGAACTCATT 58.443 43.478 0.00 0.00 40.86 2.57
436 437 3.056749 GGTCACGAAGGTACTGAACTCAT 60.057 47.826 0.00 0.00 40.86 2.90
437 438 2.295349 GGTCACGAAGGTACTGAACTCA 59.705 50.000 0.00 0.00 40.86 3.41
438 439 2.557490 AGGTCACGAAGGTACTGAACTC 59.443 50.000 0.00 0.00 40.86 3.01
439 440 2.595238 AGGTCACGAAGGTACTGAACT 58.405 47.619 0.00 0.00 40.86 3.01
440 441 4.510038 TTAGGTCACGAAGGTACTGAAC 57.490 45.455 0.00 0.00 40.86 3.18
441 442 4.586001 AGTTTAGGTCACGAAGGTACTGAA 59.414 41.667 0.00 0.00 40.86 3.02
442 443 4.147321 AGTTTAGGTCACGAAGGTACTGA 58.853 43.478 0.00 0.00 40.86 3.41
443 444 4.483311 GAGTTTAGGTCACGAAGGTACTG 58.517 47.826 0.00 0.00 40.86 2.74
445 446 3.367806 GGGAGTTTAGGTCACGAAGGTAC 60.368 52.174 0.00 0.00 0.00 3.34
446 447 2.827921 GGGAGTTTAGGTCACGAAGGTA 59.172 50.000 0.00 0.00 0.00 3.08
447 448 1.622312 GGGAGTTTAGGTCACGAAGGT 59.378 52.381 0.00 0.00 0.00 3.50
448 449 1.900486 AGGGAGTTTAGGTCACGAAGG 59.100 52.381 0.00 0.00 0.00 3.46
449 450 2.094130 GGAGGGAGTTTAGGTCACGAAG 60.094 54.545 0.00 0.00 0.00 3.79
450 451 1.897802 GGAGGGAGTTTAGGTCACGAA 59.102 52.381 0.00 0.00 0.00 3.85
451 452 1.076677 AGGAGGGAGTTTAGGTCACGA 59.923 52.381 0.00 0.00 0.00 4.35
452 453 1.204941 CAGGAGGGAGTTTAGGTCACG 59.795 57.143 0.00 0.00 0.00 4.35
453 454 1.066071 GCAGGAGGGAGTTTAGGTCAC 60.066 57.143 0.00 0.00 0.00 3.67
454 455 1.276622 GCAGGAGGGAGTTTAGGTCA 58.723 55.000 0.00 0.00 0.00 4.02
455 456 1.208293 CTGCAGGAGGGAGTTTAGGTC 59.792 57.143 5.57 0.00 0.00 3.85
456 457 1.203313 TCTGCAGGAGGGAGTTTAGGT 60.203 52.381 15.13 0.00 36.18 3.08
457 458 1.573108 TCTGCAGGAGGGAGTTTAGG 58.427 55.000 15.13 0.00 36.18 2.69
458 459 2.834549 TCTTCTGCAGGAGGGAGTTTAG 59.165 50.000 22.20 0.00 36.18 1.85
459 460 2.902608 TCTTCTGCAGGAGGGAGTTTA 58.097 47.619 22.20 0.00 36.18 2.01
460 461 1.734655 TCTTCTGCAGGAGGGAGTTT 58.265 50.000 22.20 0.00 36.18 2.66
461 462 1.734655 TTCTTCTGCAGGAGGGAGTT 58.265 50.000 22.20 0.00 36.18 3.01
462 463 1.963985 ATTCTTCTGCAGGAGGGAGT 58.036 50.000 22.20 3.05 36.18 3.85
463 464 4.504689 GGATAATTCTTCTGCAGGAGGGAG 60.505 50.000 22.20 8.59 36.05 4.30
464 465 3.392616 GGATAATTCTTCTGCAGGAGGGA 59.607 47.826 22.20 11.49 0.00 4.20
465 466 3.137176 TGGATAATTCTTCTGCAGGAGGG 59.863 47.826 22.20 0.00 0.00 4.30
466 467 4.428294 TGGATAATTCTTCTGCAGGAGG 57.572 45.455 22.20 8.50 0.00 4.30
467 468 5.826737 ACATTGGATAATTCTTCTGCAGGAG 59.173 40.000 16.65 16.65 0.00 3.69
468 469 5.759059 ACATTGGATAATTCTTCTGCAGGA 58.241 37.500 15.13 3.47 0.00 3.86
469 470 6.461110 AACATTGGATAATTCTTCTGCAGG 57.539 37.500 15.13 0.00 0.00 4.85
470 471 7.769220 AGAAACATTGGATAATTCTTCTGCAG 58.231 34.615 7.63 7.63 29.69 4.41
471 472 7.707624 AGAAACATTGGATAATTCTTCTGCA 57.292 32.000 0.00 0.00 29.69 4.41
472 473 8.992835 AAAGAAACATTGGATAATTCTTCTGC 57.007 30.769 0.00 0.00 38.89 4.26
480 481 9.880157 CCTCATGAAAAAGAAACATTGGATAAT 57.120 29.630 0.00 0.00 0.00 1.28
481 482 9.087871 TCCTCATGAAAAAGAAACATTGGATAA 57.912 29.630 0.00 0.00 0.00 1.75
482 483 8.648698 TCCTCATGAAAAAGAAACATTGGATA 57.351 30.769 0.00 0.00 0.00 2.59
483 484 7.234166 ACTCCTCATGAAAAAGAAACATTGGAT 59.766 33.333 0.00 0.00 0.00 3.41
484 485 6.550854 ACTCCTCATGAAAAAGAAACATTGGA 59.449 34.615 0.00 0.00 0.00 3.53
485 486 6.752168 ACTCCTCATGAAAAAGAAACATTGG 58.248 36.000 0.00 0.00 0.00 3.16
486 487 9.185192 GTTACTCCTCATGAAAAAGAAACATTG 57.815 33.333 0.00 0.00 0.00 2.82
487 488 9.136323 AGTTACTCCTCATGAAAAAGAAACATT 57.864 29.630 0.00 0.00 0.00 2.71
488 489 8.697507 AGTTACTCCTCATGAAAAAGAAACAT 57.302 30.769 0.00 0.00 0.00 2.71
489 490 9.273016 CTAGTTACTCCTCATGAAAAAGAAACA 57.727 33.333 0.00 0.00 0.00 2.83
490 491 9.274206 ACTAGTTACTCCTCATGAAAAAGAAAC 57.726 33.333 0.00 0.00 0.00 2.78
494 495 9.930693 ACTTACTAGTTACTCCTCATGAAAAAG 57.069 33.333 0.00 0.00 0.00 2.27
495 496 9.924650 GACTTACTAGTTACTCCTCATGAAAAA 57.075 33.333 0.00 0.00 33.84 1.94
496 497 9.310449 AGACTTACTAGTTACTCCTCATGAAAA 57.690 33.333 0.00 0.00 33.84 2.29
497 498 8.880991 AGACTTACTAGTTACTCCTCATGAAA 57.119 34.615 0.00 0.00 33.84 2.69
498 499 8.740906 CAAGACTTACTAGTTACTCCTCATGAA 58.259 37.037 0.00 0.00 33.84 2.57
499 500 7.148052 GCAAGACTTACTAGTTACTCCTCATGA 60.148 40.741 0.00 0.00 33.84 3.07
500 501 6.975772 GCAAGACTTACTAGTTACTCCTCATG 59.024 42.308 0.00 0.00 33.84 3.07
501 502 6.183360 CGCAAGACTTACTAGTTACTCCTCAT 60.183 42.308 0.00 0.00 43.02 2.90
502 503 5.123502 CGCAAGACTTACTAGTTACTCCTCA 59.876 44.000 0.00 0.00 43.02 3.86
503 504 5.123661 ACGCAAGACTTACTAGTTACTCCTC 59.876 44.000 0.00 0.00 43.62 3.71
504 505 5.008980 ACGCAAGACTTACTAGTTACTCCT 58.991 41.667 0.00 0.00 43.62 3.69
505 506 5.307926 ACGCAAGACTTACTAGTTACTCC 57.692 43.478 0.00 0.00 43.62 3.85
506 507 7.692088 TCATACGCAAGACTTACTAGTTACTC 58.308 38.462 0.00 0.00 43.62 2.59
507 508 7.621428 TCATACGCAAGACTTACTAGTTACT 57.379 36.000 0.00 0.00 43.62 2.24
508 509 8.853469 ATTCATACGCAAGACTTACTAGTTAC 57.147 34.615 0.00 0.00 43.62 2.50
523 524 9.758651 ACAGTGAGTATTAATAATTCATACGCA 57.241 29.630 11.84 0.98 32.73 5.24
536 537 9.607988 TGAACTCTTCAAAACAGTGAGTATTAA 57.392 29.630 0.00 0.00 37.05 1.40
537 538 9.778741 ATGAACTCTTCAAAACAGTGAGTATTA 57.221 29.630 0.00 0.00 43.95 0.98
538 539 8.562892 CATGAACTCTTCAAAACAGTGAGTATT 58.437 33.333 0.00 0.00 43.95 1.89
539 540 7.933577 TCATGAACTCTTCAAAACAGTGAGTAT 59.066 33.333 0.00 0.00 43.95 2.12
540 541 7.272244 TCATGAACTCTTCAAAACAGTGAGTA 58.728 34.615 0.00 0.00 43.95 2.59
541 542 6.115446 TCATGAACTCTTCAAAACAGTGAGT 58.885 36.000 0.00 0.00 43.95 3.41
542 543 6.609237 TCATGAACTCTTCAAAACAGTGAG 57.391 37.500 0.00 0.00 43.95 3.51
543 544 7.420002 CAATCATGAACTCTTCAAAACAGTGA 58.580 34.615 0.00 0.00 43.95 3.41
544 545 6.639686 CCAATCATGAACTCTTCAAAACAGTG 59.360 38.462 0.00 0.00 43.95 3.66
545 546 6.239120 CCCAATCATGAACTCTTCAAAACAGT 60.239 38.462 0.00 0.00 43.95 3.55
546 547 6.016024 TCCCAATCATGAACTCTTCAAAACAG 60.016 38.462 0.00 0.00 43.95 3.16
547 548 5.832595 TCCCAATCATGAACTCTTCAAAACA 59.167 36.000 0.00 0.00 43.95 2.83
548 549 6.152379 GTCCCAATCATGAACTCTTCAAAAC 58.848 40.000 0.00 0.00 43.95 2.43
549 550 5.832595 TGTCCCAATCATGAACTCTTCAAAA 59.167 36.000 0.00 0.00 43.95 2.44
550 551 5.384336 TGTCCCAATCATGAACTCTTCAAA 58.616 37.500 0.00 0.00 43.95 2.69
551 552 4.984295 TGTCCCAATCATGAACTCTTCAA 58.016 39.130 0.00 0.00 43.95 2.69
552 553 4.639078 TGTCCCAATCATGAACTCTTCA 57.361 40.909 0.00 0.00 45.01 3.02
553 554 6.151648 TCAAATGTCCCAATCATGAACTCTTC 59.848 38.462 0.00 0.00 0.00 2.87
554 555 6.012113 TCAAATGTCCCAATCATGAACTCTT 58.988 36.000 0.00 0.00 0.00 2.85
555 556 5.573219 TCAAATGTCCCAATCATGAACTCT 58.427 37.500 0.00 0.00 0.00 3.24
556 557 5.649395 TCTCAAATGTCCCAATCATGAACTC 59.351 40.000 0.00 0.00 0.00 3.01
557 558 5.573219 TCTCAAATGTCCCAATCATGAACT 58.427 37.500 0.00 0.00 0.00 3.01
558 559 5.902613 TCTCAAATGTCCCAATCATGAAC 57.097 39.130 0.00 0.00 0.00 3.18
559 560 6.914654 TTTCTCAAATGTCCCAATCATGAA 57.085 33.333 0.00 0.00 0.00 2.57
560 561 6.914654 TTTTCTCAAATGTCCCAATCATGA 57.085 33.333 0.00 0.00 0.00 3.07
561 562 6.592607 CCTTTTTCTCAAATGTCCCAATCATG 59.407 38.462 0.00 0.00 0.00 3.07
562 563 6.497954 TCCTTTTTCTCAAATGTCCCAATCAT 59.502 34.615 0.00 0.00 0.00 2.45
563 564 5.837979 TCCTTTTTCTCAAATGTCCCAATCA 59.162 36.000 0.00 0.00 0.00 2.57
564 565 6.015095 ACTCCTTTTTCTCAAATGTCCCAATC 60.015 38.462 0.00 0.00 0.00 2.67
565 566 5.840693 ACTCCTTTTTCTCAAATGTCCCAAT 59.159 36.000 0.00 0.00 0.00 3.16
566 567 5.208121 ACTCCTTTTTCTCAAATGTCCCAA 58.792 37.500 0.00 0.00 0.00 4.12
567 568 4.803452 ACTCCTTTTTCTCAAATGTCCCA 58.197 39.130 0.00 0.00 0.00 4.37
568 569 7.468141 AATACTCCTTTTTCTCAAATGTCCC 57.532 36.000 0.00 0.00 0.00 4.46
582 583 9.423964 TGGTAGTTTTTGGTTAAATACTCCTTT 57.576 29.630 0.00 0.00 38.47 3.11
583 584 8.853126 GTGGTAGTTTTTGGTTAAATACTCCTT 58.147 33.333 0.00 0.00 38.47 3.36
584 585 8.000127 TGTGGTAGTTTTTGGTTAAATACTCCT 59.000 33.333 0.00 0.00 38.47 3.69
1041 1048 4.706476 TGAGGATCCATTGAAACCATGTTC 59.294 41.667 15.82 0.00 0.00 3.18
2922 5623 6.765989 TCAGTTACTTCAGTGCACTAATGTTT 59.234 34.615 21.20 4.61 0.00 2.83
3201 5924 3.507009 GGTCGTCGTCCTCTCCGG 61.507 72.222 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.