Multiple sequence alignment - TraesCS4D01G326900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G326900 chr4D 100.000 6089 0 0 1 6089 486616164 486622252 0.000000e+00 11245.0
1 TraesCS4D01G326900 chr4D 84.355 473 67 5 5607 6077 486433857 486433390 2.000000e-124 457.0
2 TraesCS4D01G326900 chr4D 95.062 162 8 0 181 342 38450776 38450615 7.830000e-64 255.0
3 TraesCS4D01G326900 chr4D 88.889 99 11 0 1869 1967 498070704 498070802 8.290000e-24 122.0
4 TraesCS4D01G326900 chr4D 87.302 63 8 0 1625 1687 489238296 489238234 8.470000e-09 73.1
5 TraesCS4D01G326900 chr5A 89.391 2545 176 33 3617 6089 666870621 666873143 0.000000e+00 3118.0
6 TraesCS4D01G326900 chr5A 90.583 1476 102 18 1997 3451 666868720 666870179 0.000000e+00 1921.0
7 TraesCS4D01G326900 chr5A 89.766 811 50 21 341 1128 666866801 666867601 0.000000e+00 1007.0
8 TraesCS4D01G326900 chr5A 93.031 574 37 1 5516 6089 667069108 667068538 0.000000e+00 835.0
9 TraesCS4D01G326900 chr5A 84.069 521 77 4 5569 6089 666823693 666824207 1.180000e-136 497.0
10 TraesCS4D01G326900 chr5A 82.677 508 78 8 5572 6077 666750474 666750973 5.600000e-120 442.0
11 TraesCS4D01G326900 chr5A 85.130 269 30 7 1700 1967 666868393 666868652 3.620000e-67 267.0
12 TraesCS4D01G326900 chr5A 88.398 181 16 2 1131 1306 666867707 666867887 4.780000e-51 213.0
13 TraesCS4D01G326900 chr5A 85.915 71 6 3 1589 1658 436083968 436083901 8.470000e-09 73.1
14 TraesCS4D01G326900 chr4B 87.655 1531 141 24 1997 3507 621092249 621093751 0.000000e+00 1736.0
15 TraesCS4D01G326900 chr4B 90.325 1261 82 17 3617 4850 621093899 621095146 0.000000e+00 1616.0
16 TraesCS4D01G326900 chr4B 93.230 842 27 8 967 1799 621075667 621076487 0.000000e+00 1212.0
17 TraesCS4D01G326900 chr4B 92.670 573 36 2 5520 6089 621281274 621280705 0.000000e+00 821.0
18 TraesCS4D01G326900 chr4B 91.854 577 37 3 5520 6089 621191553 621190980 0.000000e+00 797.0
19 TraesCS4D01G326900 chr4B 89.277 401 33 6 4849 5239 621095175 621095575 1.520000e-135 494.0
20 TraesCS4D01G326900 chr4B 83.556 523 80 4 5567 6089 620965789 620966305 9.180000e-133 484.0
21 TraesCS4D01G326900 chr4B 82.016 506 81 8 5574 6077 620945333 620945830 7.300000e-114 422.0
22 TraesCS4D01G326900 chr4B 90.517 232 16 3 737 964 621075275 621075504 9.920000e-78 302.0
23 TraesCS4D01G326900 chr4B 93.333 180 9 2 1791 1969 621082762 621082939 4.680000e-66 263.0
24 TraesCS4D01G326900 chr4B 77.528 178 34 4 5285 5459 621095675 621095849 1.080000e-17 102.0
25 TraesCS4D01G326900 chr4B 97.368 38 0 1 54 91 621074749 621074785 5.100000e-06 63.9
26 TraesCS4D01G326900 chr3B 87.193 734 72 14 4122 4834 133820407 133819675 0.000000e+00 815.0
27 TraesCS4D01G326900 chr3B 83.241 543 67 17 1999 2534 133823304 133822779 1.540000e-130 477.0
28 TraesCS4D01G326900 chr3B 82.804 535 61 18 2863 3397 133821597 133821094 3.350000e-122 449.0
29 TraesCS4D01G326900 chr3B 83.371 439 52 15 3655 4085 133821070 133820645 2.660000e-103 387.0
30 TraesCS4D01G326900 chr3B 78.689 305 50 10 996 1297 133823589 133823297 8.060000e-44 189.0
31 TraesCS4D01G326900 chr3A 86.667 735 74 18 4122 4834 101895112 101894380 0.000000e+00 793.0
32 TraesCS4D01G326900 chr3A 81.387 865 114 31 1999 2843 101898061 101897224 0.000000e+00 662.0
33 TraesCS4D01G326900 chr3A 84.421 475 53 15 3619 4085 101895969 101895508 1.200000e-121 448.0
34 TraesCS4D01G326900 chr3A 83.367 499 65 12 2866 3364 101896807 101896327 4.330000e-121 446.0
35 TraesCS4D01G326900 chr3A 79.128 321 41 18 996 1297 101898367 101898054 1.340000e-46 198.0
36 TraesCS4D01G326900 chr3D 81.550 813 111 24 1999 2799 84914933 84914148 8.610000e-178 634.0
37 TraesCS4D01G326900 chr3D 91.398 372 32 0 4122 4493 84912182 84911811 1.510000e-140 510.0
38 TraesCS4D01G326900 chr3D 86.493 422 46 6 3619 4033 84912878 84912461 2.590000e-123 453.0
39 TraesCS4D01G326900 chr3D 82.836 536 62 20 2864 3398 84913704 84913198 2.590000e-123 453.0
40 TraesCS4D01G326900 chr3D 88.462 312 34 2 4524 4834 84911747 84911437 5.760000e-100 375.0
41 TraesCS4D01G326900 chr3D 95.181 166 7 1 177 341 211947737 211947572 1.680000e-65 261.0
42 TraesCS4D01G326900 chr3D 95.031 161 8 0 181 341 536788497 536788337 2.820000e-63 254.0
43 TraesCS4D01G326900 chr3D 86.555 119 15 1 1574 1692 556988589 556988472 4.950000e-26 130.0
44 TraesCS4D01G326900 chr2D 96.341 164 6 0 181 344 478874292 478874129 2.800000e-68 270.0
45 TraesCS4D01G326900 chr2D 78.218 404 63 18 548 941 128991011 128991399 1.020000e-57 235.0
46 TraesCS4D01G326900 chr5D 95.783 166 7 0 178 343 476192537 476192372 1.010000e-67 268.0
47 TraesCS4D01G326900 chr5D 96.226 159 6 0 178 336 552059766 552059924 1.680000e-65 261.0
48 TraesCS4D01G326900 chr5D 91.111 45 4 0 1651 1695 287569219 287569175 1.830000e-05 62.1
49 TraesCS4D01G326900 chr6D 95.706 163 7 0 181 343 72143276 72143438 4.680000e-66 263.0
50 TraesCS4D01G326900 chr1B 94.048 168 9 1 175 341 626072063 626071896 2.820000e-63 254.0
51 TraesCS4D01G326900 chr1D 91.620 179 12 3 166 343 37884078 37883902 1.700000e-60 244.0
52 TraesCS4D01G326900 chr1D 81.395 129 13 5 1566 1692 476713178 476713297 1.810000e-15 95.3
53 TraesCS4D01G326900 chr1D 92.727 55 4 0 1638 1692 381303989 381304043 5.060000e-11 80.5
54 TraesCS4D01G326900 chr7D 86.829 205 27 0 2094 2298 628878913 628878709 4.750000e-56 230.0
55 TraesCS4D01G326900 chr7D 81.739 115 13 7 1000 1112 628881811 628881703 8.410000e-14 89.8
56 TraesCS4D01G326900 chr7D 81.982 111 9 6 1582 1692 578468585 578468486 3.910000e-12 84.2
57 TraesCS4D01G326900 chr7B 85.644 202 29 0 2094 2295 731349099 731349300 4.780000e-51 213.0
58 TraesCS4D01G326900 chr7B 82.143 112 16 4 1000 1109 731348127 731348236 6.500000e-15 93.5
59 TraesCS4D01G326900 chr2A 77.525 396 60 20 555 941 135895817 135896192 1.720000e-50 211.0
60 TraesCS4D01G326900 chr2B 86.614 127 13 4 1566 1690 4621428 4621552 2.960000e-28 137.0
61 TraesCS4D01G326900 chr2B 85.849 106 8 6 1863 1965 18312039 18311938 8.350000e-19 106.0
62 TraesCS4D01G326900 chr2B 87.838 74 8 1 1585 1658 161392903 161392831 1.090000e-12 86.1
63 TraesCS4D01G326900 chr4A 82.828 99 17 0 1597 1695 486497971 486498069 8.410000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G326900 chr4D 486616164 486622252 6088 False 11245.000000 11245 100.00000 1 6089 1 chr4D.!!$F1 6088
1 TraesCS4D01G326900 chr5A 666866801 666873143 6342 False 1305.200000 3118 88.65360 341 6089 5 chr5A.!!$F3 5748
2 TraesCS4D01G326900 chr5A 667068538 667069108 570 True 835.000000 835 93.03100 5516 6089 1 chr5A.!!$R2 573
3 TraesCS4D01G326900 chr5A 666823693 666824207 514 False 497.000000 497 84.06900 5569 6089 1 chr5A.!!$F2 520
4 TraesCS4D01G326900 chr4B 621092249 621095849 3600 False 987.000000 1736 86.19625 1997 5459 4 chr4B.!!$F5 3462
5 TraesCS4D01G326900 chr4B 621280705 621281274 569 True 821.000000 821 92.67000 5520 6089 1 chr4B.!!$R2 569
6 TraesCS4D01G326900 chr4B 621190980 621191553 573 True 797.000000 797 91.85400 5520 6089 1 chr4B.!!$R1 569
7 TraesCS4D01G326900 chr4B 621074749 621076487 1738 False 525.966667 1212 93.70500 54 1799 3 chr4B.!!$F4 1745
8 TraesCS4D01G326900 chr4B 620965789 620966305 516 False 484.000000 484 83.55600 5567 6089 1 chr4B.!!$F2 522
9 TraesCS4D01G326900 chr3B 133819675 133823589 3914 True 463.400000 815 83.05960 996 4834 5 chr3B.!!$R1 3838
10 TraesCS4D01G326900 chr3A 101894380 101898367 3987 True 509.400000 793 82.99400 996 4834 5 chr3A.!!$R1 3838
11 TraesCS4D01G326900 chr3D 84911437 84914933 3496 True 485.000000 634 86.14780 1999 4834 5 chr3D.!!$R4 2835

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.166814 GCTTTGCAACCTCGTGCTAG 59.833 55.000 0.00 0.00 45.17 3.42 F
109 110 0.320771 CAACCTCGTGCTAGCCTTGT 60.321 55.000 13.29 0.00 0.00 3.16 F
134 168 1.162698 TTACTCTCCACGTCCACGAG 58.837 55.000 6.03 0.00 43.02 4.18 F
153 187 1.351017 AGTGGGCTGATTTCCTTTCGA 59.649 47.619 0.00 0.00 0.00 3.71 F
154 188 1.740025 GTGGGCTGATTTCCTTTCGAG 59.260 52.381 0.00 0.00 0.00 4.04 F
155 189 1.351017 TGGGCTGATTTCCTTTCGAGT 59.649 47.619 0.00 0.00 0.00 4.18 F
2199 2974 0.525455 TGATGATCGTTGGAGTCGCG 60.525 55.000 0.00 0.00 0.00 5.87 F
2259 3034 0.615331 CCAAGAAGCAGCCAGGTCTA 59.385 55.000 0.00 0.00 0.00 2.59 F
3030 4694 0.104672 TCAGTCCACTTCCCTGGGAA 60.105 55.000 26.02 26.02 39.66 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1515 2245 1.272769 GTCGAGATATAGCCACACCCC 59.727 57.143 0.00 0.00 0.00 4.95 R
2027 2800 3.774734 ACCCATGTGTAGTAGAGTGTGA 58.225 45.455 0.00 0.00 0.00 3.58 R
2054 2827 8.608844 AGTGTTAGAGATTTCGTGAAAATTCT 57.391 30.769 13.15 13.15 37.70 2.40 R
2066 2840 9.814899 CAGATCACATCTTAGTGTTAGAGATTT 57.185 33.333 0.00 0.00 40.37 2.17 R
2199 2974 8.223177 ACGTATACATGATAATAGTAGGCTCC 57.777 38.462 0.00 0.00 0.00 4.70 R
2259 3034 2.706190 AGCCAAATATAGCCGTTCTCCT 59.294 45.455 0.00 0.00 0.00 3.69 R
3030 4694 0.333993 AATGCCCCAGTGAGCTTGAT 59.666 50.000 6.66 0.00 0.00 2.57 R
4341 6693 0.324460 AGTAACCCCAGAGGACCGAG 60.324 60.000 0.00 0.00 39.89 4.63 R
5106 7540 0.535797 GAAATCCTCGGTCGGTCCTT 59.464 55.000 0.00 0.00 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.789813 CCGAGATCGATCGTTGCTC 58.210 57.895 19.33 17.27 41.12 4.26
19 20 0.661780 CCGAGATCGATCGTTGCTCC 60.662 60.000 19.33 3.99 41.12 4.70
20 21 0.309302 CGAGATCGATCGTTGCTCCT 59.691 55.000 19.33 0.00 43.02 3.69
21 22 1.268794 CGAGATCGATCGTTGCTCCTT 60.269 52.381 19.33 0.00 43.02 3.36
22 23 2.389998 GAGATCGATCGTTGCTCCTTC 58.610 52.381 19.33 4.89 0.00 3.46
23 24 2.028130 AGATCGATCGTTGCTCCTTCT 58.972 47.619 19.33 3.44 0.00 2.85
24 25 2.034053 AGATCGATCGTTGCTCCTTCTC 59.966 50.000 19.33 0.00 0.00 2.87
25 26 0.456221 TCGATCGTTGCTCCTTCTCC 59.544 55.000 15.94 0.00 0.00 3.71
26 27 0.867753 CGATCGTTGCTCCTTCTCCG 60.868 60.000 7.03 0.00 0.00 4.63
27 28 0.528684 GATCGTTGCTCCTTCTCCGG 60.529 60.000 0.00 0.00 0.00 5.14
28 29 2.579684 ATCGTTGCTCCTTCTCCGGC 62.580 60.000 0.00 0.00 0.00 6.13
29 30 2.815647 GTTGCTCCTTCTCCGGCG 60.816 66.667 0.00 0.00 0.00 6.46
30 31 4.760047 TTGCTCCTTCTCCGGCGC 62.760 66.667 0.00 0.00 35.38 6.53
47 48 2.892425 CCGCCTGGATCGTTGCTC 60.892 66.667 0.00 0.00 37.49 4.26
48 49 2.892425 CGCCTGGATCGTTGCTCC 60.892 66.667 0.00 0.00 0.00 4.70
49 50 2.586792 GCCTGGATCGTTGCTCCT 59.413 61.111 0.00 0.00 33.69 3.69
50 51 1.078143 GCCTGGATCGTTGCTCCTT 60.078 57.895 0.00 0.00 33.69 3.36
51 52 1.092345 GCCTGGATCGTTGCTCCTTC 61.092 60.000 0.00 0.00 33.69 3.46
52 53 0.462759 CCTGGATCGTTGCTCCTTCC 60.463 60.000 0.00 0.00 33.69 3.46
53 54 0.462759 CTGGATCGTTGCTCCTTCCC 60.463 60.000 0.00 0.00 33.69 3.97
54 55 0.909610 TGGATCGTTGCTCCTTCCCT 60.910 55.000 0.00 0.00 33.69 4.20
55 56 0.253327 GGATCGTTGCTCCTTCCCTT 59.747 55.000 0.00 0.00 0.00 3.95
56 57 1.657822 GATCGTTGCTCCTTCCCTTC 58.342 55.000 0.00 0.00 0.00 3.46
57 58 1.208293 GATCGTTGCTCCTTCCCTTCT 59.792 52.381 0.00 0.00 0.00 2.85
58 59 1.056660 TCGTTGCTCCTTCCCTTCTT 58.943 50.000 0.00 0.00 0.00 2.52
91 92 2.543445 CGTTCCATTTCACAGCTTTGCA 60.543 45.455 0.00 0.00 0.00 4.08
94 95 2.137523 CCATTTCACAGCTTTGCAACC 58.862 47.619 0.00 0.00 0.00 3.77
96 97 2.869233 TTTCACAGCTTTGCAACCTC 57.131 45.000 0.00 0.00 0.00 3.85
99 100 0.317269 CACAGCTTTGCAACCTCGTG 60.317 55.000 0.00 0.97 0.00 4.35
101 102 1.526917 AGCTTTGCAACCTCGTGCT 60.527 52.632 0.00 0.00 45.17 4.40
102 103 0.250295 AGCTTTGCAACCTCGTGCTA 60.250 50.000 0.00 0.00 45.17 3.49
103 104 0.166814 GCTTTGCAACCTCGTGCTAG 59.833 55.000 0.00 0.00 45.17 3.42
105 106 1.234615 TTTGCAACCTCGTGCTAGCC 61.235 55.000 13.29 2.49 45.17 3.93
106 107 2.111999 TTGCAACCTCGTGCTAGCCT 62.112 55.000 13.29 0.00 45.17 4.58
107 108 1.376037 GCAACCTCGTGCTAGCCTT 60.376 57.895 13.29 0.00 41.51 4.35
108 109 1.639298 GCAACCTCGTGCTAGCCTTG 61.639 60.000 13.29 1.62 41.51 3.61
109 110 0.320771 CAACCTCGTGCTAGCCTTGT 60.321 55.000 13.29 0.00 0.00 3.16
111 112 1.293498 CCTCGTGCTAGCCTTGTGT 59.707 57.895 13.29 0.00 0.00 3.72
116 150 1.806542 CGTGCTAGCCTTGTGTGATTT 59.193 47.619 13.29 0.00 0.00 2.17
118 152 3.181520 CGTGCTAGCCTTGTGTGATTTAC 60.182 47.826 13.29 0.00 0.00 2.01
120 154 4.093556 GTGCTAGCCTTGTGTGATTTACTC 59.906 45.833 13.29 0.00 0.00 2.59
129 163 3.251571 GTGTGATTTACTCTCCACGTCC 58.748 50.000 0.00 0.00 32.58 4.79
134 168 1.162698 TTACTCTCCACGTCCACGAG 58.837 55.000 6.03 0.00 43.02 4.18
153 187 1.351017 AGTGGGCTGATTTCCTTTCGA 59.649 47.619 0.00 0.00 0.00 3.71
154 188 1.740025 GTGGGCTGATTTCCTTTCGAG 59.260 52.381 0.00 0.00 0.00 4.04
155 189 1.351017 TGGGCTGATTTCCTTTCGAGT 59.649 47.619 0.00 0.00 0.00 4.18
156 190 2.224769 TGGGCTGATTTCCTTTCGAGTT 60.225 45.455 0.00 0.00 0.00 3.01
157 191 2.820197 GGGCTGATTTCCTTTCGAGTTT 59.180 45.455 0.00 0.00 0.00 2.66
158 192 3.119814 GGGCTGATTTCCTTTCGAGTTTC 60.120 47.826 0.00 0.00 0.00 2.78
164 198 8.665685 GCTGATTTCCTTTCGAGTTTCTTATAA 58.334 33.333 0.00 0.00 0.00 0.98
189 223 9.628500 AACAAAATTCTTGTATATACTCCCTCC 57.372 33.333 13.89 0.00 31.50 4.30
190 224 7.931948 ACAAAATTCTTGTATATACTCCCTCCG 59.068 37.037 13.89 0.00 0.00 4.63
191 225 7.613551 AAATTCTTGTATATACTCCCTCCGT 57.386 36.000 13.89 0.00 0.00 4.69
192 226 7.613551 AATTCTTGTATATACTCCCTCCGTT 57.386 36.000 13.89 0.00 0.00 4.44
193 227 7.613551 ATTCTTGTATATACTCCCTCCGTTT 57.386 36.000 13.89 0.00 0.00 3.60
194 228 6.645790 TCTTGTATATACTCCCTCCGTTTC 57.354 41.667 13.89 0.00 0.00 2.78
195 229 6.371278 TCTTGTATATACTCCCTCCGTTTCT 58.629 40.000 13.89 0.00 0.00 2.52
196 230 7.520798 TCTTGTATATACTCCCTCCGTTTCTA 58.479 38.462 13.89 0.00 0.00 2.10
197 231 8.000709 TCTTGTATATACTCCCTCCGTTTCTAA 58.999 37.037 13.89 0.00 0.00 2.10
198 232 8.537728 TTGTATATACTCCCTCCGTTTCTAAA 57.462 34.615 13.89 0.00 0.00 1.85
199 233 8.716674 TGTATATACTCCCTCCGTTTCTAAAT 57.283 34.615 13.89 0.00 0.00 1.40
200 234 9.812347 TGTATATACTCCCTCCGTTTCTAAATA 57.188 33.333 13.89 0.00 0.00 1.40
205 239 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
206 240 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
207 241 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
208 242 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
209 243 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
210 244 8.827677 CCCTCCGTTTCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
211 245 8.827677 CCTCCGTTTCTAAATATAAGTCTTTGG 58.172 37.037 0.00 0.00 0.00 3.28
212 246 9.595823 CTCCGTTTCTAAATATAAGTCTTTGGA 57.404 33.333 0.00 0.00 0.00 3.53
213 247 9.595823 TCCGTTTCTAAATATAAGTCTTTGGAG 57.404 33.333 0.00 0.00 0.00 3.86
214 248 9.595823 CCGTTTCTAAATATAAGTCTTTGGAGA 57.404 33.333 0.00 0.00 0.00 3.71
222 256 9.981460 AAATATAAGTCTTTGGAGAGGTTTCAT 57.019 29.630 0.00 0.00 31.07 2.57
223 257 9.981460 AATATAAGTCTTTGGAGAGGTTTCATT 57.019 29.630 0.00 0.00 31.07 2.57
226 260 7.693969 AAGTCTTTGGAGAGGTTTCATTATG 57.306 36.000 0.00 0.00 31.07 1.90
227 261 6.183347 AGTCTTTGGAGAGGTTTCATTATGG 58.817 40.000 0.00 0.00 31.07 2.74
228 262 6.012508 AGTCTTTGGAGAGGTTTCATTATGGA 60.013 38.462 0.00 0.00 31.07 3.41
229 263 6.094186 GTCTTTGGAGAGGTTTCATTATGGAC 59.906 42.308 0.00 0.00 31.07 4.02
230 264 5.779241 TTGGAGAGGTTTCATTATGGACT 57.221 39.130 0.00 0.00 0.00 3.85
231 265 6.884472 TTGGAGAGGTTTCATTATGGACTA 57.116 37.500 0.00 0.00 0.00 2.59
232 266 6.235231 TGGAGAGGTTTCATTATGGACTAC 57.765 41.667 0.00 0.00 0.00 2.73
233 267 5.724370 TGGAGAGGTTTCATTATGGACTACA 59.276 40.000 0.00 0.00 0.00 2.74
234 268 6.386927 TGGAGAGGTTTCATTATGGACTACAT 59.613 38.462 0.00 0.00 43.68 2.29
235 269 7.567250 TGGAGAGGTTTCATTATGGACTACATA 59.433 37.037 0.00 0.00 41.03 2.29
236 270 7.873505 GGAGAGGTTTCATTATGGACTACATAC 59.126 40.741 0.00 0.00 41.61 2.39
237 271 7.434492 AGAGGTTTCATTATGGACTACATACG 58.566 38.462 0.00 0.00 41.61 3.06
238 272 6.522054 AGGTTTCATTATGGACTACATACGG 58.478 40.000 0.00 0.00 41.61 4.02
239 273 6.325545 AGGTTTCATTATGGACTACATACGGA 59.674 38.462 0.00 0.00 41.61 4.69
240 274 6.987992 GGTTTCATTATGGACTACATACGGAA 59.012 38.462 0.00 0.00 41.61 4.30
241 275 7.042254 GGTTTCATTATGGACTACATACGGAAC 60.042 40.741 0.00 0.00 41.61 3.62
242 276 6.718522 TCATTATGGACTACATACGGAACA 57.281 37.500 0.00 0.00 41.61 3.18
243 277 7.114866 TCATTATGGACTACATACGGAACAA 57.885 36.000 0.00 0.00 41.61 2.83
244 278 7.557724 TCATTATGGACTACATACGGAACAAA 58.442 34.615 0.00 0.00 41.61 2.83
245 279 8.041919 TCATTATGGACTACATACGGAACAAAA 58.958 33.333 0.00 0.00 41.61 2.44
246 280 8.836413 CATTATGGACTACATACGGAACAAAAT 58.164 33.333 0.00 0.00 41.61 1.82
247 281 6.677781 ATGGACTACATACGGAACAAAATG 57.322 37.500 0.00 0.00 38.26 2.32
248 282 5.795972 TGGACTACATACGGAACAAAATGA 58.204 37.500 0.00 0.00 0.00 2.57
249 283 5.872617 TGGACTACATACGGAACAAAATGAG 59.127 40.000 0.00 0.00 0.00 2.90
250 284 5.873164 GGACTACATACGGAACAAAATGAGT 59.127 40.000 0.00 0.00 0.00 3.41
251 285 6.183360 GGACTACATACGGAACAAAATGAGTG 60.183 42.308 0.00 0.00 0.00 3.51
252 286 6.460781 ACTACATACGGAACAAAATGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
253 287 6.932400 ACTACATACGGAACAAAATGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
254 288 6.817765 ACATACGGAACAAAATGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
255 289 6.842163 ACATACGGAACAAAATGAGTGAATC 58.158 36.000 0.00 0.00 0.00 2.52
256 290 6.655003 ACATACGGAACAAAATGAGTGAATCT 59.345 34.615 0.00 0.00 0.00 2.40
257 291 7.822334 ACATACGGAACAAAATGAGTGAATCTA 59.178 33.333 0.00 0.00 0.00 1.98
258 292 6.481954 ACGGAACAAAATGAGTGAATCTAC 57.518 37.500 0.00 0.00 0.00 2.59
259 293 6.231211 ACGGAACAAAATGAGTGAATCTACT 58.769 36.000 0.00 0.00 0.00 2.57
260 294 6.710744 ACGGAACAAAATGAGTGAATCTACTT 59.289 34.615 0.00 0.00 0.00 2.24
261 295 7.095187 ACGGAACAAAATGAGTGAATCTACTTC 60.095 37.037 0.00 0.00 0.00 3.01
262 296 7.118390 CGGAACAAAATGAGTGAATCTACTTCT 59.882 37.037 0.00 0.00 34.75 2.85
263 297 9.436957 GGAACAAAATGAGTGAATCTACTTCTA 57.563 33.333 0.00 0.00 34.75 2.10
270 304 9.453572 AATGAGTGAATCTACTTCTAAAATGCA 57.546 29.630 0.00 0.00 34.75 3.96
271 305 9.624373 ATGAGTGAATCTACTTCTAAAATGCAT 57.376 29.630 0.00 0.00 34.75 3.96
272 306 9.102757 TGAGTGAATCTACTTCTAAAATGCATC 57.897 33.333 0.00 0.00 34.75 3.91
273 307 9.323985 GAGTGAATCTACTTCTAAAATGCATCT 57.676 33.333 0.00 0.00 34.75 2.90
291 325 9.828039 AATGCATCTATATACATCTGTATGTGG 57.172 33.333 12.10 8.21 45.99 4.17
292 326 8.366359 TGCATCTATATACATCTGTATGTGGT 57.634 34.615 12.10 0.00 45.99 4.16
293 327 8.815912 TGCATCTATATACATCTGTATGTGGTT 58.184 33.333 12.10 1.86 45.99 3.67
294 328 9.307121 GCATCTATATACATCTGTATGTGGTTC 57.693 37.037 12.10 0.75 45.99 3.62
303 337 8.806429 ACATCTGTATGTGGTTCATAATGAAA 57.194 30.769 0.00 0.00 44.79 2.69
304 338 9.412460 ACATCTGTATGTGGTTCATAATGAAAT 57.588 29.630 0.00 0.00 44.79 2.17
305 339 9.888878 CATCTGTATGTGGTTCATAATGAAATC 57.111 33.333 0.00 0.00 38.22 2.17
306 340 9.857656 ATCTGTATGTGGTTCATAATGAAATCT 57.142 29.630 0.00 0.00 38.22 2.40
307 341 9.330063 TCTGTATGTGGTTCATAATGAAATCTC 57.670 33.333 0.00 0.00 38.22 2.75
308 342 9.334947 CTGTATGTGGTTCATAATGAAATCTCT 57.665 33.333 0.00 0.00 38.22 3.10
312 346 9.685276 ATGTGGTTCATAATGAAATCTCTACAA 57.315 29.630 0.00 0.00 38.22 2.41
313 347 9.513906 TGTGGTTCATAATGAAATCTCTACAAA 57.486 29.630 0.00 0.00 38.22 2.83
314 348 9.994432 GTGGTTCATAATGAAATCTCTACAAAG 57.006 33.333 0.00 0.00 38.22 2.77
315 349 9.958180 TGGTTCATAATGAAATCTCTACAAAGA 57.042 29.630 0.00 0.00 38.22 2.52
334 368 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
335 369 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
336 370 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
337 371 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
338 372 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
339 373 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
353 387 4.392047 GGAGGGAGTAGTAACTAGAGCTC 58.608 52.174 5.27 5.27 35.56 4.09
372 406 3.769058 CTCGACGTCTTTTGTAACAACG 58.231 45.455 14.70 0.00 39.16 4.10
385 419 4.304110 TGTAACAACGAGTTGAGGTGATC 58.696 43.478 21.14 6.19 42.93 2.92
397 439 6.512191 AGTTGAGGTGATCAGCTCTTCTTCT 61.512 44.000 39.86 29.03 45.45 2.85
453 501 2.252747 CGTGCGTCGTTTCTATTGGTA 58.747 47.619 0.00 0.00 34.52 3.25
454 502 2.278094 CGTGCGTCGTTTCTATTGGTAG 59.722 50.000 0.00 0.00 34.52 3.18
455 503 2.028883 GTGCGTCGTTTCTATTGGTAGC 59.971 50.000 0.00 0.00 0.00 3.58
456 504 2.094390 TGCGTCGTTTCTATTGGTAGCT 60.094 45.455 0.00 0.00 0.00 3.32
480 528 5.367302 AGCTAGTACTACTGCTACTACCAC 58.633 45.833 13.45 0.00 33.20 4.16
519 573 7.761651 AACAAAAGCAAACAGATTTTCTCTC 57.238 32.000 0.00 0.00 43.45 3.20
533 587 5.705609 TTTTCTCTCCATGTTTAAGCCAC 57.294 39.130 0.00 0.00 0.00 5.01
664 734 3.251571 CAAACTTCCTACTGGCGTACTC 58.748 50.000 0.00 0.00 0.00 2.59
679 750 3.605486 GCGTACTCGTACAAAAGTTCGAT 59.395 43.478 17.33 0.00 38.18 3.59
682 753 6.503872 GCGTACTCGTACAAAAGTTCGATAAG 60.504 42.308 17.33 0.00 38.18 1.73
694 765 4.251268 AGTTCGATAAGGAAAAACTCCCG 58.749 43.478 0.00 0.00 46.81 5.14
695 766 3.967332 TCGATAAGGAAAAACTCCCGT 57.033 42.857 0.00 0.00 46.81 5.28
696 767 5.047092 AGTTCGATAAGGAAAAACTCCCGTA 60.047 40.000 0.00 0.00 46.81 4.02
697 768 5.404466 TCGATAAGGAAAAACTCCCGTAA 57.596 39.130 0.00 0.00 46.81 3.18
698 769 5.792741 TCGATAAGGAAAAACTCCCGTAAA 58.207 37.500 0.00 0.00 46.81 2.01
699 770 6.229733 TCGATAAGGAAAAACTCCCGTAAAA 58.770 36.000 0.00 0.00 46.81 1.52
700 771 6.709846 TCGATAAGGAAAAACTCCCGTAAAAA 59.290 34.615 0.00 0.00 46.81 1.94
701 772 7.391275 TCGATAAGGAAAAACTCCCGTAAAAAT 59.609 33.333 0.00 0.00 46.81 1.82
702 773 8.667463 CGATAAGGAAAAACTCCCGTAAAAATA 58.333 33.333 0.00 0.00 46.81 1.40
706 777 8.645814 AGGAAAAACTCCCGTAAAAATAATCT 57.354 30.769 0.00 0.00 46.81 2.40
707 778 9.743581 AGGAAAAACTCCCGTAAAAATAATCTA 57.256 29.630 0.00 0.00 46.81 1.98
710 781 9.850628 AAAAACTCCCGTAAAAATAATCTAAGC 57.149 29.630 0.00 0.00 0.00 3.09
711 782 8.570068 AAACTCCCGTAAAAATAATCTAAGCA 57.430 30.769 0.00 0.00 0.00 3.91
712 783 8.570068 AACTCCCGTAAAAATAATCTAAGCAA 57.430 30.769 0.00 0.00 0.00 3.91
713 784 8.570068 ACTCCCGTAAAAATAATCTAAGCAAA 57.430 30.769 0.00 0.00 0.00 3.68
714 785 9.016438 ACTCCCGTAAAAATAATCTAAGCAAAA 57.984 29.630 0.00 0.00 0.00 2.44
715 786 9.849166 CTCCCGTAAAAATAATCTAAGCAAAAA 57.151 29.630 0.00 0.00 0.00 1.94
825 947 6.872670 TTTCTTCGCAAAACATTTTTACGT 57.127 29.167 0.00 0.00 32.24 3.57
965 1252 5.760253 TCCTCTGATTCGATGCCTATTTTTC 59.240 40.000 0.00 0.00 0.00 2.29
1012 1299 4.477249 TCATCAGCTCATGGATCTACTGA 58.523 43.478 0.00 0.57 38.42 3.41
1164 1563 6.069088 ACCCCAACCAGATCATTTTCTACATA 60.069 38.462 0.00 0.00 0.00 2.29
1324 1755 8.646900 AGACAAATTTTAAAATGGTCTTAGCCA 58.353 29.630 26.92 0.00 39.11 4.75
1477 2205 3.195396 AGGCACACACATTTTGTTTGAGT 59.805 39.130 1.14 0.00 38.03 3.41
1479 2207 3.551485 GCACACACATTTTGTTTGAGTCC 59.449 43.478 1.14 0.00 38.03 3.85
1480 2208 4.111916 CACACACATTTTGTTTGAGTCCC 58.888 43.478 1.14 0.00 38.03 4.46
1482 2210 3.131933 CACACATTTTGTTTGAGTCCCCA 59.868 43.478 0.00 0.00 35.67 4.96
1501 2231 7.039293 AGTCCCCACCATATTTAGTTTGTTTTC 60.039 37.037 0.00 0.00 0.00 2.29
1517 2247 7.989170 AGTTTGTTTTCCTAATACGGTATAGGG 59.011 37.037 16.67 14.06 0.00 3.53
1557 2288 6.609237 ACTTAACCAAGTCTCGGTAAAAAC 57.391 37.500 0.00 0.00 41.25 2.43
1558 2289 5.234972 ACTTAACCAAGTCTCGGTAAAAACG 59.765 40.000 0.00 0.00 41.25 3.60
1570 2301 6.259608 TCTCGGTAAAAACGGAAATTACACAA 59.740 34.615 0.00 0.00 32.47 3.33
1802 2537 6.833933 ACATGGAGTTCATTACTTTAATCCCC 59.166 38.462 0.00 0.00 37.17 4.81
1806 2541 7.614192 TGGAGTTCATTACTTTAATCCCCTTTC 59.386 37.037 0.00 0.00 37.17 2.62
1808 2543 7.709601 AGTTCATTACTTTAATCCCCTTTCCT 58.290 34.615 0.00 0.00 31.29 3.36
1813 2548 8.811994 CATTACTTTAATCCCCTTTCCTCAAAA 58.188 33.333 0.00 0.00 0.00 2.44
1866 2601 4.759693 TGGTGAATAAAGCGTCTGATTTGT 59.240 37.500 0.00 0.00 35.00 2.83
1933 2668 4.831155 CACAATGCATTAATGGGAGGATCT 59.169 41.667 12.53 0.00 33.73 2.75
1934 2669 4.831155 ACAATGCATTAATGGGAGGATCTG 59.169 41.667 12.53 0.00 33.73 2.90
1938 2673 4.202461 TGCATTAATGGGAGGATCTGGTAC 60.202 45.833 17.02 0.00 33.73 3.34
1950 2685 5.324409 AGGATCTGGTACAATCTTTTTGCA 58.676 37.500 0.00 0.00 38.70 4.08
1951 2686 5.954150 AGGATCTGGTACAATCTTTTTGCAT 59.046 36.000 0.00 0.00 38.70 3.96
2027 2800 8.416329 CAAGTAAATGCTTGCCCTCTTAATTAT 58.584 33.333 0.00 0.00 39.26 1.28
2048 2821 3.774734 TCACACTCTACTACACATGGGT 58.225 45.455 5.60 5.60 0.00 4.51
2054 2827 6.950041 ACACTCTACTACACATGGGTAAGTTA 59.050 38.462 9.55 0.41 0.00 2.24
2055 2828 7.122353 ACACTCTACTACACATGGGTAAGTTAG 59.878 40.741 9.55 9.88 0.00 2.34
2066 2840 6.938030 ACATGGGTAAGTTAGAATTTTCACGA 59.062 34.615 0.00 0.00 0.00 4.35
2199 2974 0.525455 TGATGATCGTTGGAGTCGCG 60.525 55.000 0.00 0.00 0.00 5.87
2259 3034 0.615331 CCAAGAAGCAGCCAGGTCTA 59.385 55.000 0.00 0.00 0.00 2.59
2373 3149 8.831550 TGATATTGTAAACGTAAATGCATGCTA 58.168 29.630 20.33 5.73 0.00 3.49
2574 3768 9.457436 AATTAATCCTAGTTATTTTCACCGTGT 57.543 29.630 0.00 0.00 0.00 4.49
2632 3836 2.352715 CGTGAGTGAGTTCAGTATGCCA 60.353 50.000 0.00 0.00 34.76 4.92
2657 3861 1.299014 GCTGAGATCTCTGACCGCG 60.299 63.158 28.14 0.00 0.00 6.46
2713 3917 4.705023 GTCAATGGCCTACTTGGTGTTATT 59.295 41.667 3.32 0.00 38.35 1.40
2725 3929 7.360113 ACTTGGTGTTATTTTCTCAATTGGT 57.640 32.000 5.42 0.00 0.00 3.67
2859 4072 2.952978 ACCGATCGAACTCTCTGCTATT 59.047 45.455 18.66 0.00 0.00 1.73
2937 4601 2.092968 TGCTGATTATGGTGTCCCACTC 60.093 50.000 0.00 0.00 45.65 3.51
2977 4641 2.093152 GCATTTTCGTACACACTACCGG 59.907 50.000 0.00 0.00 0.00 5.28
3030 4694 0.104672 TCAGTCCACTTCCCTGGGAA 60.105 55.000 26.02 26.02 39.66 3.97
3073 4740 5.181009 GGACCGTAGCAAAGGTATAAAGTT 58.819 41.667 0.00 0.00 41.51 2.66
3076 4743 7.010830 GGACCGTAGCAAAGGTATAAAGTTAAG 59.989 40.741 0.00 0.00 41.51 1.85
3109 4776 5.407407 AGTTGTGGTTCTAGATGTGTAGG 57.593 43.478 0.00 0.00 0.00 3.18
3166 4833 8.362639 AGTAAAGCTTATATTTGCATTCCATGG 58.637 33.333 4.97 4.97 0.00 3.66
3176 4843 6.602410 TTTGCATTCCATGGTTCTGAATTA 57.398 33.333 12.58 0.00 0.00 1.40
3179 4846 7.185318 TGCATTCCATGGTTCTGAATTATTT 57.815 32.000 12.58 0.00 0.00 1.40
3211 4885 7.602644 GGGATTTACTTTCAGGATTTGTTTTCC 59.397 37.037 0.00 0.00 0.00 3.13
3220 4894 1.467342 GATTTGTTTTCCGTCCCTCCG 59.533 52.381 0.00 0.00 0.00 4.63
3313 4987 0.740149 CACAGTTGGCTCAGCAACAA 59.260 50.000 12.60 0.18 34.04 2.83
3352 5026 3.039011 ACCTTCTGCCTACCATTACGAT 58.961 45.455 0.00 0.00 0.00 3.73
3359 5033 6.588204 TCTGCCTACCATTACGATATTTTGT 58.412 36.000 0.00 0.00 0.00 2.83
3380 5054 7.599630 TTGTTACTTGGATTTATGGTACGTC 57.400 36.000 0.00 0.00 0.00 4.34
3402 5076 6.527023 CGTCGTGTCTAATTCATTCTACTTGT 59.473 38.462 0.00 0.00 0.00 3.16
3441 5136 5.074584 AGCCTTTTCACGGTTTTGTTAAA 57.925 34.783 0.00 0.00 0.00 1.52
3488 5355 7.412137 AACGGTGTATGTTAGTGAAAAGTAC 57.588 36.000 0.00 0.00 0.00 2.73
3510 5377 9.749490 AGTACGACAATACATTTTTATTCGTTG 57.251 29.630 0.00 0.00 29.63 4.10
3515 5382 8.514136 ACAATACATTTTTATTCGTTGTGTGG 57.486 30.769 0.00 0.00 0.00 4.17
3516 5383 8.138712 ACAATACATTTTTATTCGTTGTGTGGT 58.861 29.630 0.00 0.00 0.00 4.16
3517 5384 9.613957 CAATACATTTTTATTCGTTGTGTGGTA 57.386 29.630 0.00 0.00 0.00 3.25
3519 5386 7.028926 ACATTTTTATTCGTTGTGTGGTACA 57.971 32.000 0.00 0.00 37.56 2.90
3530 5448 8.861033 TCGTTGTGTGGTACATATATAAGAAC 57.139 34.615 0.00 0.00 44.52 3.01
3533 5451 9.090692 GTTGTGTGGTACATATATAAGAACGTT 57.909 33.333 0.00 0.00 44.52 3.99
3534 5452 9.656040 TTGTGTGGTACATATATAAGAACGTTT 57.344 29.630 0.46 0.00 44.52 3.60
3550 5468 2.770232 ACGTTTATTAGTGAGGAGGGGG 59.230 50.000 0.00 0.00 0.00 5.40
3555 5473 6.183361 CGTTTATTAGTGAGGAGGGGGAATAA 60.183 42.308 0.00 0.00 0.00 1.40
3567 5485 1.133356 GGGGAATAAGAGGCCTGCATT 60.133 52.381 12.00 6.36 0.00 3.56
3569 5487 2.659428 GGAATAAGAGGCCTGCATTGT 58.341 47.619 12.00 0.00 0.00 2.71
3570 5488 3.435026 GGGAATAAGAGGCCTGCATTGTA 60.435 47.826 12.00 0.00 0.00 2.41
3571 5489 3.565902 GGAATAAGAGGCCTGCATTGTAC 59.434 47.826 12.00 0.00 0.00 2.90
3573 5491 2.814805 AAGAGGCCTGCATTGTACAT 57.185 45.000 12.00 0.00 0.00 2.29
3574 5492 2.814805 AGAGGCCTGCATTGTACATT 57.185 45.000 12.00 0.00 0.00 2.71
3576 5494 3.434309 AGAGGCCTGCATTGTACATTTT 58.566 40.909 12.00 0.00 0.00 1.82
3577 5495 4.599041 AGAGGCCTGCATTGTACATTTTA 58.401 39.130 12.00 0.00 0.00 1.52
3578 5496 4.399303 AGAGGCCTGCATTGTACATTTTAC 59.601 41.667 12.00 0.00 0.00 2.01
3579 5497 3.447229 AGGCCTGCATTGTACATTTTACC 59.553 43.478 3.11 0.00 0.00 2.85
3580 5498 3.430236 GGCCTGCATTGTACATTTTACCC 60.430 47.826 0.00 0.00 0.00 3.69
3581 5499 3.733684 GCCTGCATTGTACATTTTACCCG 60.734 47.826 0.00 0.00 0.00 5.28
3582 5500 3.442273 CCTGCATTGTACATTTTACCCGT 59.558 43.478 0.00 0.00 0.00 5.28
3583 5501 4.411327 CTGCATTGTACATTTTACCCGTG 58.589 43.478 0.00 0.00 0.00 4.94
3587 5505 1.799403 TGTACATTTTACCCGTGCACG 59.201 47.619 31.77 31.77 39.44 5.34
3600 5518 2.834689 CGTGCACGGTAGAAAAATCAC 58.165 47.619 31.15 0.00 35.37 3.06
3601 5519 2.478894 CGTGCACGGTAGAAAAATCACT 59.521 45.455 31.15 0.00 35.37 3.41
3602 5520 3.423123 CGTGCACGGTAGAAAAATCACTC 60.423 47.826 31.15 0.00 35.37 3.51
3604 5522 4.927425 GTGCACGGTAGAAAAATCACTCTA 59.073 41.667 0.00 0.00 0.00 2.43
3605 5523 5.581085 GTGCACGGTAGAAAAATCACTCTAT 59.419 40.000 0.00 0.00 0.00 1.98
3606 5524 5.580691 TGCACGGTAGAAAAATCACTCTATG 59.419 40.000 0.00 0.00 0.00 2.23
3608 5526 6.312918 GCACGGTAGAAAAATCACTCTATGAA 59.687 38.462 0.00 0.00 41.93 2.57
3612 5582 7.333423 CGGTAGAAAAATCACTCTATGAAACCA 59.667 37.037 0.00 0.00 41.93 3.67
3613 5583 9.010029 GGTAGAAAAATCACTCTATGAAACCAA 57.990 33.333 0.00 0.00 41.93 3.67
3658 5628 5.652014 TCAGATTTACCATGTCATGTTTCCC 59.348 40.000 11.84 0.00 0.00 3.97
3678 5652 9.832445 GTTTCCCTTTCTCATAGTATGTGAATA 57.168 33.333 22.03 14.41 40.93 1.75
3692 5666 2.292267 GTGAATATGGTGCAGGTCCTG 58.708 52.381 15.15 15.15 34.12 3.86
3740 5714 4.326826 CAGCAAATGGAGTACTTCCTCAA 58.673 43.478 0.00 0.00 46.92 3.02
3829 5810 2.821546 TCATATGCTACGGTTGTCTGC 58.178 47.619 0.00 0.00 0.00 4.26
3830 5811 2.167487 TCATATGCTACGGTTGTCTGCA 59.833 45.455 0.00 0.00 40.35 4.41
3843 5824 1.005097 TGTCTGCATTGCTCATCCCTT 59.995 47.619 10.49 0.00 0.00 3.95
3848 5829 3.949754 CTGCATTGCTCATCCCTTTTCTA 59.050 43.478 10.49 0.00 0.00 2.10
3879 5861 4.030977 GTCAATTTAGCTGATGCGCAAAAG 59.969 41.667 17.11 16.51 45.42 2.27
4005 5987 8.874816 GGATGTGAGTTTCTCTATCTTTGTTAC 58.125 37.037 11.22 0.00 31.06 2.50
4041 6023 1.475280 CCCCTTCATGTCATGCACAAG 59.525 52.381 8.03 6.83 38.97 3.16
4042 6024 1.135199 CCCTTCATGTCATGCACAAGC 60.135 52.381 8.03 0.00 38.97 4.01
4053 6035 3.665544 GCACAAGCACACCACATTT 57.334 47.368 0.00 0.00 41.58 2.32
4054 6036 2.791383 GCACAAGCACACCACATTTA 57.209 45.000 0.00 0.00 41.58 1.40
4064 6046 4.260579 GCACACCACATTTAAGGTTTTTGC 60.261 41.667 0.00 0.00 35.52 3.68
4068 6050 4.125703 CCACATTTAAGGTTTTTGCAGCA 58.874 39.130 0.00 0.00 0.00 4.41
4069 6056 4.211794 CCACATTTAAGGTTTTTGCAGCAG 59.788 41.667 0.00 0.00 0.00 4.24
4218 6570 3.454719 TTGGCTGGAGAATTTGATCCA 57.545 42.857 7.52 7.52 43.34 3.41
4224 6576 5.393896 GGCTGGAGAATTTGATCCAAGAAAG 60.394 44.000 8.72 0.61 44.82 2.62
4251 6603 2.642700 GCACATTTGCCCGTTCGT 59.357 55.556 0.00 0.00 43.66 3.85
4304 6656 0.690762 TCCTTACTGGTTGGTGGCTC 59.309 55.000 0.00 0.00 37.07 4.70
4341 6693 4.755123 CCGGTTATCAAGATGATACCAACC 59.245 45.833 11.12 11.12 38.92 3.77
4440 6792 3.063704 TGCATTGGAGCAAGCCGG 61.064 61.111 0.00 0.00 42.46 6.13
4475 6827 9.481340 GTAATGTCTATTCTGCATCTGTTCATA 57.519 33.333 0.00 0.00 0.00 2.15
4499 6868 9.888878 ATATAATCTGAACAAATGAATGCTTCG 57.111 29.630 0.00 0.00 0.00 3.79
4520 6906 6.236017 TCGTTTGTTAAGATTCAGCGATTT 57.764 33.333 0.00 0.00 0.00 2.17
4541 6934 7.413988 CGATTTCATAACAGATTGCACTAACCA 60.414 37.037 0.00 0.00 0.00 3.67
4542 6935 6.494893 TTCATAACAGATTGCACTAACCAC 57.505 37.500 0.00 0.00 0.00 4.16
4571 6964 0.178990 GACCTTTGCAGGGTCTTGGT 60.179 55.000 24.59 10.85 46.89 3.67
4598 6991 2.019249 CCATGCATCATTCGTGGAGTT 58.981 47.619 0.00 0.00 41.91 3.01
4629 7022 6.906659 TCCGAGAACGATATATGTCTTTACC 58.093 40.000 0.00 0.00 42.66 2.85
4686 7079 2.731451 CACAACATGGATACCGATAGCG 59.269 50.000 0.00 0.00 37.24 4.26
4873 7299 1.135859 GTTTCATTCTCTGCAGTGCCG 60.136 52.381 14.67 6.40 0.00 5.69
4941 7375 1.684386 CGCAGGAGGAAGATGGCTCT 61.684 60.000 0.00 0.00 0.00 4.09
4989 7423 4.438148 TCGACGCTGAAATATTGGATGAA 58.562 39.130 0.00 0.00 0.00 2.57
4992 7426 5.490139 ACGCTGAAATATTGGATGAACTG 57.510 39.130 0.00 0.00 0.00 3.16
5004 7438 2.210116 GATGAACTGACAACACACCGT 58.790 47.619 0.00 0.00 0.00 4.83
5007 7441 0.746563 AACTGACAACACACCGTGGG 60.747 55.000 0.00 0.00 37.94 4.61
5071 7505 0.179234 TCAGGTTCACTCAAACGCCA 59.821 50.000 0.00 0.00 0.00 5.69
5076 7510 2.034053 GGTTCACTCAAACGCCATTCAA 59.966 45.455 0.00 0.00 0.00 2.69
5106 7540 3.523157 TCTGAAGATAGAACAATGGCCCA 59.477 43.478 0.00 0.00 0.00 5.36
5126 7560 0.613853 AGGACCGACCGAGGATTTCA 60.614 55.000 0.00 0.00 44.74 2.69
5166 7606 3.111265 AGGGAAATCCTCAGGCAGT 57.889 52.632 0.00 0.00 44.06 4.40
5179 7619 2.109126 GGCAGTAGCTCTTTGCCGG 61.109 63.158 17.12 0.00 46.82 6.13
5196 7636 2.799207 GCCGGATGCACCATTATTGTTG 60.799 50.000 5.05 0.00 40.77 3.33
5318 7812 4.749976 AGGAGTTGAAAGATTAGCTCGTC 58.250 43.478 0.00 0.00 0.00 4.20
5404 7904 2.811855 TGTTTGAGCGTACGAGTTTGA 58.188 42.857 21.65 0.00 0.00 2.69
5415 7915 5.448162 GCGTACGAGTTTGAAAATATTGCTC 59.552 40.000 21.65 0.00 0.00 4.26
5478 7990 1.202687 TGTGTGTGCTTAGCTTGCTCT 60.203 47.619 5.60 0.00 0.00 4.09
5498 8010 7.375053 TGCTCTGTTTGAGTGTAAAAAGTTTT 58.625 30.769 0.00 0.00 44.41 2.43
5592 8108 2.712057 ATGTTACAGTTTGCTGCTGC 57.288 45.000 8.89 8.89 46.30 5.25
5679 8198 1.901085 GTCGAGGTCTTGGGCAGAT 59.099 57.895 0.00 0.00 32.60 2.90
5680 8199 0.179097 GTCGAGGTCTTGGGCAGATC 60.179 60.000 0.00 0.00 32.60 2.75
5681 8200 1.144936 CGAGGTCTTGGGCAGATCC 59.855 63.158 0.00 0.00 32.08 3.36
5728 8247 2.510238 GTAGTGCGGCAGCCTCTG 60.510 66.667 10.54 0.00 44.33 3.35
5783 8302 3.491652 GCGCCGTCCTTCAGCTTC 61.492 66.667 0.00 0.00 0.00 3.86
5789 8308 1.673033 CCGTCCTTCAGCTTCACGAAT 60.673 52.381 0.00 0.00 32.08 3.34
5954 8473 1.065928 GAGCTGGATGTACCCGTCG 59.934 63.158 0.00 0.00 38.00 5.12
6018 8537 3.665675 ATGGACTCCTTGGTCGCGC 62.666 63.158 0.00 0.00 37.12 6.86
6026 8545 1.446792 CTTGGTCGCGCTGATGTCT 60.447 57.895 5.56 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.309302 AGGAGCAACGATCGATCTCG 59.691 55.000 24.34 14.86 44.14 4.04
2 3 2.034053 AGAAGGAGCAACGATCGATCTC 59.966 50.000 24.34 21.35 0.00 2.75
3 4 2.028130 AGAAGGAGCAACGATCGATCT 58.972 47.619 24.34 14.63 0.00 2.75
4 5 2.389998 GAGAAGGAGCAACGATCGATC 58.610 52.381 24.34 15.68 0.00 3.69
5 6 1.067821 GGAGAAGGAGCAACGATCGAT 59.932 52.381 24.34 7.21 0.00 3.59
6 7 0.456221 GGAGAAGGAGCAACGATCGA 59.544 55.000 24.34 0.00 0.00 3.59
7 8 0.867753 CGGAGAAGGAGCAACGATCG 60.868 60.000 14.88 14.88 0.00 3.69
8 9 0.528684 CCGGAGAAGGAGCAACGATC 60.529 60.000 0.00 0.00 0.00 3.69
9 10 1.517832 CCGGAGAAGGAGCAACGAT 59.482 57.895 0.00 0.00 0.00 3.73
10 11 2.970639 CCGGAGAAGGAGCAACGA 59.029 61.111 0.00 0.00 0.00 3.85
11 12 2.815647 GCCGGAGAAGGAGCAACG 60.816 66.667 5.05 0.00 0.00 4.10
12 13 2.815647 CGCCGGAGAAGGAGCAAC 60.816 66.667 5.05 0.00 0.00 4.17
30 31 2.892425 GAGCAACGATCCAGGCGG 60.892 66.667 0.00 0.00 0.00 6.13
31 32 2.859273 AAGGAGCAACGATCCAGGCG 62.859 60.000 0.54 0.00 41.08 5.52
32 33 1.078143 AAGGAGCAACGATCCAGGC 60.078 57.895 0.54 0.00 41.08 4.85
33 34 0.462759 GGAAGGAGCAACGATCCAGG 60.463 60.000 0.54 0.00 41.08 4.45
34 35 0.462759 GGGAAGGAGCAACGATCCAG 60.463 60.000 0.54 0.00 41.08 3.86
35 36 0.909610 AGGGAAGGAGCAACGATCCA 60.910 55.000 0.54 0.00 41.08 3.41
36 37 0.253327 AAGGGAAGGAGCAACGATCC 59.747 55.000 0.00 0.00 38.56 3.36
37 38 1.208293 AGAAGGGAAGGAGCAACGATC 59.792 52.381 0.00 0.00 0.00 3.69
38 39 1.280457 AGAAGGGAAGGAGCAACGAT 58.720 50.000 0.00 0.00 0.00 3.73
39 40 1.002087 GAAGAAGGGAAGGAGCAACGA 59.998 52.381 0.00 0.00 0.00 3.85
40 41 1.443802 GAAGAAGGGAAGGAGCAACG 58.556 55.000 0.00 0.00 0.00 4.10
41 42 1.827681 GGAAGAAGGGAAGGAGCAAC 58.172 55.000 0.00 0.00 0.00 4.17
42 43 0.324943 CGGAAGAAGGGAAGGAGCAA 59.675 55.000 0.00 0.00 0.00 3.91
43 44 1.553690 CCGGAAGAAGGGAAGGAGCA 61.554 60.000 0.00 0.00 0.00 4.26
44 45 1.222113 CCGGAAGAAGGGAAGGAGC 59.778 63.158 0.00 0.00 0.00 4.70
45 46 1.222113 GCCGGAAGAAGGGAAGGAG 59.778 63.158 5.05 0.00 0.00 3.69
46 47 2.656069 CGCCGGAAGAAGGGAAGGA 61.656 63.158 5.05 0.00 0.00 3.36
47 48 2.125106 CGCCGGAAGAAGGGAAGG 60.125 66.667 5.05 0.00 0.00 3.46
48 49 2.125106 CCGCCGGAAGAAGGGAAG 60.125 66.667 5.05 0.00 0.00 3.46
49 50 4.404098 GCCGCCGGAAGAAGGGAA 62.404 66.667 7.68 0.00 0.00 3.97
51 52 4.840005 GAGCCGCCGGAAGAAGGG 62.840 72.222 7.68 0.00 0.00 3.95
52 53 4.840005 GGAGCCGCCGGAAGAAGG 62.840 72.222 7.68 0.05 0.00 3.46
53 54 4.840005 GGGAGCCGCCGGAAGAAG 62.840 72.222 7.68 0.00 37.63 2.85
91 92 0.320771 CACAAGGCTAGCACGAGGTT 60.321 55.000 18.24 0.00 0.00 3.50
94 95 0.038251 TCACACAAGGCTAGCACGAG 60.038 55.000 18.24 5.61 0.00 4.18
96 97 1.442769 AATCACACAAGGCTAGCACG 58.557 50.000 18.24 6.39 0.00 5.34
99 100 4.508662 AGAGTAAATCACACAAGGCTAGC 58.491 43.478 6.04 6.04 0.00 3.42
101 102 4.530553 TGGAGAGTAAATCACACAAGGCTA 59.469 41.667 0.00 0.00 0.00 3.93
102 103 3.327757 TGGAGAGTAAATCACACAAGGCT 59.672 43.478 0.00 0.00 0.00 4.58
103 104 3.437049 GTGGAGAGTAAATCACACAAGGC 59.563 47.826 0.00 0.00 37.75 4.35
105 106 4.307432 ACGTGGAGAGTAAATCACACAAG 58.693 43.478 0.00 0.00 37.71 3.16
106 107 4.304110 GACGTGGAGAGTAAATCACACAA 58.696 43.478 0.00 0.00 37.71 3.33
107 108 3.305813 GGACGTGGAGAGTAAATCACACA 60.306 47.826 0.00 0.00 37.71 3.72
108 109 3.251571 GGACGTGGAGAGTAAATCACAC 58.748 50.000 0.00 0.00 35.74 3.82
109 110 2.894765 TGGACGTGGAGAGTAAATCACA 59.105 45.455 0.00 0.00 0.00 3.58
111 112 2.094906 CGTGGACGTGGAGAGTAAATCA 60.095 50.000 0.00 0.00 34.11 2.57
116 150 0.035881 ACTCGTGGACGTGGAGAGTA 59.964 55.000 0.00 0.00 40.00 2.59
118 152 1.210413 CACTCGTGGACGTGGAGAG 59.790 63.158 0.00 0.00 40.80 3.20
129 163 0.036010 AGGAAATCAGCCCACTCGTG 60.036 55.000 0.00 0.00 0.00 4.35
134 168 1.740025 CTCGAAAGGAAATCAGCCCAC 59.260 52.381 0.00 0.00 0.00 4.61
138 172 5.363979 AAGAAACTCGAAAGGAAATCAGC 57.636 39.130 0.00 0.00 0.00 4.26
139 173 9.974750 GTTATAAGAAACTCGAAAGGAAATCAG 57.025 33.333 0.00 0.00 0.00 2.90
164 198 7.931948 CGGAGGGAGTATATACAAGAATTTTGT 59.068 37.037 15.18 9.78 36.49 2.83
182 216 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
184 218 8.827677 CAAAGACTTATATTTAGAAACGGAGGG 58.172 37.037 0.00 0.00 0.00 4.30
185 219 8.827677 CCAAAGACTTATATTTAGAAACGGAGG 58.172 37.037 0.00 0.00 0.00 4.30
186 220 9.595823 TCCAAAGACTTATATTTAGAAACGGAG 57.404 33.333 0.00 0.00 0.00 4.63
187 221 9.595823 CTCCAAAGACTTATATTTAGAAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
188 222 9.595823 TCTCCAAAGACTTATATTTAGAAACGG 57.404 33.333 0.00 0.00 0.00 4.44
196 230 9.981460 ATGAAACCTCTCCAAAGACTTATATTT 57.019 29.630 0.00 0.00 0.00 1.40
197 231 9.981460 AATGAAACCTCTCCAAAGACTTATATT 57.019 29.630 0.00 0.00 0.00 1.28
200 234 9.401058 CATAATGAAACCTCTCCAAAGACTTAT 57.599 33.333 0.00 0.00 0.00 1.73
201 235 7.829211 CCATAATGAAACCTCTCCAAAGACTTA 59.171 37.037 0.00 0.00 0.00 2.24
202 236 6.660949 CCATAATGAAACCTCTCCAAAGACTT 59.339 38.462 0.00 0.00 0.00 3.01
203 237 6.012508 TCCATAATGAAACCTCTCCAAAGACT 60.013 38.462 0.00 0.00 0.00 3.24
204 238 6.094186 GTCCATAATGAAACCTCTCCAAAGAC 59.906 42.308 0.00 0.00 0.00 3.01
205 239 6.012508 AGTCCATAATGAAACCTCTCCAAAGA 60.013 38.462 0.00 0.00 0.00 2.52
206 240 6.183347 AGTCCATAATGAAACCTCTCCAAAG 58.817 40.000 0.00 0.00 0.00 2.77
207 241 6.139679 AGTCCATAATGAAACCTCTCCAAA 57.860 37.500 0.00 0.00 0.00 3.28
208 242 5.779241 AGTCCATAATGAAACCTCTCCAA 57.221 39.130 0.00 0.00 0.00 3.53
209 243 5.724370 TGTAGTCCATAATGAAACCTCTCCA 59.276 40.000 0.00 0.00 0.00 3.86
210 244 6.235231 TGTAGTCCATAATGAAACCTCTCC 57.765 41.667 0.00 0.00 0.00 3.71
211 245 7.595502 CGTATGTAGTCCATAATGAAACCTCTC 59.404 40.741 0.00 0.00 37.77 3.20
212 246 7.434492 CGTATGTAGTCCATAATGAAACCTCT 58.566 38.462 0.00 0.00 37.77 3.69
213 247 6.645415 CCGTATGTAGTCCATAATGAAACCTC 59.355 42.308 0.00 0.00 37.77 3.85
214 248 6.325545 TCCGTATGTAGTCCATAATGAAACCT 59.674 38.462 0.00 0.00 37.77 3.50
215 249 6.518493 TCCGTATGTAGTCCATAATGAAACC 58.482 40.000 0.00 0.00 37.77 3.27
216 250 7.493320 TGTTCCGTATGTAGTCCATAATGAAAC 59.507 37.037 0.00 0.00 37.77 2.78
217 251 7.557724 TGTTCCGTATGTAGTCCATAATGAAA 58.442 34.615 0.00 0.00 37.77 2.69
218 252 7.114866 TGTTCCGTATGTAGTCCATAATGAA 57.885 36.000 0.00 0.00 37.77 2.57
219 253 6.718522 TGTTCCGTATGTAGTCCATAATGA 57.281 37.500 0.00 0.00 37.77 2.57
220 254 7.780008 TTTGTTCCGTATGTAGTCCATAATG 57.220 36.000 0.00 0.00 37.77 1.90
221 255 8.836413 CATTTTGTTCCGTATGTAGTCCATAAT 58.164 33.333 0.00 0.00 37.77 1.28
222 256 8.041919 TCATTTTGTTCCGTATGTAGTCCATAA 58.958 33.333 0.00 0.00 37.77 1.90
223 257 7.557724 TCATTTTGTTCCGTATGTAGTCCATA 58.442 34.615 0.00 0.00 34.86 2.74
224 258 6.411376 TCATTTTGTTCCGTATGTAGTCCAT 58.589 36.000 0.00 0.00 37.58 3.41
225 259 5.795972 TCATTTTGTTCCGTATGTAGTCCA 58.204 37.500 0.00 0.00 0.00 4.02
226 260 5.873164 ACTCATTTTGTTCCGTATGTAGTCC 59.127 40.000 0.00 0.00 0.00 3.85
227 261 6.588756 TCACTCATTTTGTTCCGTATGTAGTC 59.411 38.462 0.00 0.00 0.00 2.59
228 262 6.460781 TCACTCATTTTGTTCCGTATGTAGT 58.539 36.000 0.00 0.00 0.00 2.73
229 263 6.961359 TCACTCATTTTGTTCCGTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
230 264 7.822334 AGATTCACTCATTTTGTTCCGTATGTA 59.178 33.333 0.00 0.00 0.00 2.29
231 265 6.655003 AGATTCACTCATTTTGTTCCGTATGT 59.345 34.615 0.00 0.00 0.00 2.29
232 266 7.076842 AGATTCACTCATTTTGTTCCGTATG 57.923 36.000 0.00 0.00 0.00 2.39
233 267 8.041323 AGTAGATTCACTCATTTTGTTCCGTAT 58.959 33.333 0.00 0.00 0.00 3.06
234 268 7.383687 AGTAGATTCACTCATTTTGTTCCGTA 58.616 34.615 0.00 0.00 0.00 4.02
235 269 6.231211 AGTAGATTCACTCATTTTGTTCCGT 58.769 36.000 0.00 0.00 0.00 4.69
236 270 6.727824 AGTAGATTCACTCATTTTGTTCCG 57.272 37.500 0.00 0.00 0.00 4.30
237 271 8.329203 AGAAGTAGATTCACTCATTTTGTTCC 57.671 34.615 0.00 0.00 40.67 3.62
244 278 9.453572 TGCATTTTAGAAGTAGATTCACTCATT 57.546 29.630 0.00 0.00 40.67 2.57
245 279 9.624373 ATGCATTTTAGAAGTAGATTCACTCAT 57.376 29.630 0.00 0.00 40.67 2.90
246 280 9.102757 GATGCATTTTAGAAGTAGATTCACTCA 57.897 33.333 0.00 0.00 40.67 3.41
247 281 9.323985 AGATGCATTTTAGAAGTAGATTCACTC 57.676 33.333 0.00 0.00 40.67 3.51
265 299 9.828039 CCACATACAGATGTATATAGATGCATT 57.172 33.333 0.00 0.00 44.82 3.56
266 300 8.985922 ACCACATACAGATGTATATAGATGCAT 58.014 33.333 0.00 0.00 44.82 3.96
267 301 8.366359 ACCACATACAGATGTATATAGATGCA 57.634 34.615 5.21 0.00 44.82 3.96
268 302 9.307121 GAACCACATACAGATGTATATAGATGC 57.693 37.037 5.21 0.00 44.82 3.91
277 311 9.898152 TTTCATTATGAACCACATACAGATGTA 57.102 29.630 7.19 0.00 39.04 2.29
278 312 8.806429 TTTCATTATGAACCACATACAGATGT 57.194 30.769 7.19 0.00 40.51 3.06
279 313 9.888878 GATTTCATTATGAACCACATACAGATG 57.111 33.333 7.19 0.00 40.62 2.90
280 314 9.857656 AGATTTCATTATGAACCACATACAGAT 57.142 29.630 7.19 0.00 40.62 2.90
281 315 9.330063 GAGATTTCATTATGAACCACATACAGA 57.670 33.333 7.19 0.00 40.62 3.41
282 316 9.334947 AGAGATTTCATTATGAACCACATACAG 57.665 33.333 7.19 0.00 40.62 2.74
286 320 9.685276 TTGTAGAGATTTCATTATGAACCACAT 57.315 29.630 7.19 0.00 35.89 3.21
287 321 9.513906 TTTGTAGAGATTTCATTATGAACCACA 57.486 29.630 7.19 0.00 35.89 4.17
288 322 9.994432 CTTTGTAGAGATTTCATTATGAACCAC 57.006 33.333 7.19 2.67 35.89 4.16
289 323 9.958180 TCTTTGTAGAGATTTCATTATGAACCA 57.042 29.630 7.19 0.00 35.89 3.67
309 343 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
310 344 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
311 345 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
312 346 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
313 347 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
314 348 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
315 349 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
316 350 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
317 351 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
318 352 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
319 353 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
320 354 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
321 355 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
322 356 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
323 357 4.018050 AGTTACTACTCCCTCCGTTCCTAA 60.018 45.833 0.00 0.00 0.00 2.69
324 358 3.525199 AGTTACTACTCCCTCCGTTCCTA 59.475 47.826 0.00 0.00 0.00 2.94
325 359 2.311243 AGTTACTACTCCCTCCGTTCCT 59.689 50.000 0.00 0.00 0.00 3.36
326 360 2.732763 AGTTACTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
327 361 4.775236 TCTAGTTACTACTCCCTCCGTTC 58.225 47.826 0.00 0.00 35.78 3.95
328 362 4.779696 CTCTAGTTACTACTCCCTCCGTT 58.220 47.826 0.00 0.00 35.78 4.44
329 363 3.433456 GCTCTAGTTACTACTCCCTCCGT 60.433 52.174 0.00 0.00 35.78 4.69
330 364 3.140623 GCTCTAGTTACTACTCCCTCCG 58.859 54.545 0.00 0.00 35.78 4.63
331 365 4.392047 GAGCTCTAGTTACTACTCCCTCC 58.608 52.174 6.43 0.00 35.78 4.30
332 366 4.060205 CGAGCTCTAGTTACTACTCCCTC 58.940 52.174 12.85 0.98 35.78 4.30
333 367 3.710677 TCGAGCTCTAGTTACTACTCCCT 59.289 47.826 12.85 0.00 35.78 4.20
334 368 3.809279 GTCGAGCTCTAGTTACTACTCCC 59.191 52.174 12.85 0.00 35.78 4.30
335 369 3.490526 CGTCGAGCTCTAGTTACTACTCC 59.509 52.174 12.85 0.00 35.78 3.85
336 370 4.111916 ACGTCGAGCTCTAGTTACTACTC 58.888 47.826 12.85 0.00 35.78 2.59
337 371 4.111916 GACGTCGAGCTCTAGTTACTACT 58.888 47.826 12.85 0.00 38.44 2.57
338 372 4.111916 AGACGTCGAGCTCTAGTTACTAC 58.888 47.826 12.85 0.00 0.00 2.73
339 373 4.383850 AGACGTCGAGCTCTAGTTACTA 57.616 45.455 12.85 0.00 0.00 1.82
353 387 3.241322 ACTCGTTGTTACAAAAGACGTCG 59.759 43.478 10.46 5.89 35.42 5.12
372 406 3.195396 AGAAGAGCTGATCACCTCAACTC 59.805 47.826 18.17 11.79 44.21 3.01
385 419 3.648009 ACTTGACGAAGAAGAAGAGCTG 58.352 45.455 0.00 0.00 32.98 4.24
397 439 2.615447 ACTCTACACACGACTTGACGAA 59.385 45.455 0.00 0.00 37.03 3.85
453 501 5.556006 AGTAGCAGTAGTACTAGCTAGCT 57.444 43.478 23.12 23.12 36.37 3.32
454 502 5.639082 GGTAGTAGCAGTAGTACTAGCTAGC 59.361 48.000 23.39 6.62 43.51 3.42
455 503 6.646240 GTGGTAGTAGCAGTAGTACTAGCTAG 59.354 46.154 23.39 19.44 45.53 3.42
456 504 6.463614 GGTGGTAGTAGCAGTAGTACTAGCTA 60.464 46.154 20.95 20.95 45.53 3.32
480 528 4.805719 GCTTTTGTTTGACCAGAAAGAAGG 59.194 41.667 0.00 0.00 30.83 3.46
519 573 1.676006 GATCGGGTGGCTTAAACATGG 59.324 52.381 0.00 0.00 0.00 3.66
533 587 1.270678 GGGTATTTTCCTCGGATCGGG 60.271 57.143 0.00 0.00 0.00 5.14
637 707 2.479275 GCCAGTAGGAAGTTTGTTCGTC 59.521 50.000 0.00 0.00 36.89 4.20
638 708 2.490991 GCCAGTAGGAAGTTTGTTCGT 58.509 47.619 0.00 0.00 36.89 3.85
664 734 8.066000 AGTTTTTCCTTATCGAACTTTTGTACG 58.934 33.333 0.00 0.00 0.00 3.67
714 785 8.860088 GGCTGTATATTGTCCTGGAAATTATTT 58.140 33.333 0.00 0.00 0.00 1.40
715 786 8.004215 TGGCTGTATATTGTCCTGGAAATTATT 58.996 33.333 0.00 0.00 0.00 1.40
716 787 7.526041 TGGCTGTATATTGTCCTGGAAATTAT 58.474 34.615 0.00 2.17 0.00 1.28
717 788 6.905736 TGGCTGTATATTGTCCTGGAAATTA 58.094 36.000 0.00 0.00 0.00 1.40
718 789 5.765510 TGGCTGTATATTGTCCTGGAAATT 58.234 37.500 0.00 0.00 0.00 1.82
719 790 5.387113 TGGCTGTATATTGTCCTGGAAAT 57.613 39.130 0.00 3.83 0.00 2.17
720 791 4.853468 TGGCTGTATATTGTCCTGGAAA 57.147 40.909 0.00 0.00 0.00 3.13
721 792 4.853468 TTGGCTGTATATTGTCCTGGAA 57.147 40.909 0.00 0.00 0.00 3.53
722 793 5.606749 ACTATTGGCTGTATATTGTCCTGGA 59.393 40.000 0.00 0.00 0.00 3.86
723 794 5.869579 ACTATTGGCTGTATATTGTCCTGG 58.130 41.667 0.00 0.00 0.00 4.45
825 947 0.249114 TTGCTCACGCGTTACACTCA 60.249 50.000 10.22 0.00 39.65 3.41
837 959 6.090628 TGAATTTTGACAACAAAGTTGCTCAC 59.909 34.615 9.60 1.22 42.78 3.51
898 1024 2.344025 GTAGGTGCACCCGTTTCTTAG 58.656 52.381 32.29 0.00 38.74 2.18
929 1055 3.659183 ATCAGAGGAGGGGAACAAATG 57.341 47.619 0.00 0.00 0.00 2.32
965 1252 9.202273 GAGAGAAACAGCCTCAACTATTATATG 57.798 37.037 0.00 0.00 33.25 1.78
981 1268 3.872182 CCATGAGCTGATGAGAGAAACAG 59.128 47.826 15.36 0.00 0.00 3.16
1128 1423 6.209788 TGATCTGGTTGGGGTTGTTTAAATAC 59.790 38.462 0.00 0.00 0.00 1.89
1129 1424 6.315714 TGATCTGGTTGGGGTTGTTTAAATA 58.684 36.000 0.00 0.00 0.00 1.40
1164 1563 7.961326 AACATAAGCAAATCCCTCAGTAAAT 57.039 32.000 0.00 0.00 0.00 1.40
1384 2108 4.520492 ACTGTTGTCAATGGATTCTGAACC 59.480 41.667 0.00 0.00 0.00 3.62
1466 2194 2.534042 TGGTGGGGACTCAAACAAAA 57.466 45.000 0.00 0.00 0.00 2.44
1477 2205 6.211785 GGAAAACAAACTAAATATGGTGGGGA 59.788 38.462 0.00 0.00 0.00 4.81
1479 2207 7.239763 AGGAAAACAAACTAAATATGGTGGG 57.760 36.000 0.00 0.00 0.00 4.61
1501 2231 3.512724 CCACACCCCTATACCGTATTAGG 59.487 52.174 0.00 2.51 37.30 2.69
1515 2245 1.272769 GTCGAGATATAGCCACACCCC 59.727 57.143 0.00 0.00 0.00 4.95
1517 2247 5.221130 GTTAAGTCGAGATATAGCCACACC 58.779 45.833 0.00 0.00 0.00 4.16
1557 2288 8.804688 TTCCTTTTTACATTGTGTAATTTCCG 57.195 30.769 0.00 0.00 41.83 4.30
1558 2289 9.974980 TCTTCCTTTTTACATTGTGTAATTTCC 57.025 29.630 0.00 0.00 41.83 3.13
1683 2416 6.169557 AGATTATACTGTACGGGATTGCAA 57.830 37.500 4.29 0.00 0.00 4.08
1855 2590 6.539649 TGTCTTTCCTAAACAAATCAGACG 57.460 37.500 0.00 0.00 0.00 4.18
1892 2627 6.696411 CATTGTGGCATAAAAAGGGAACTAA 58.304 36.000 0.00 0.00 42.68 2.24
1924 2659 4.779993 AAAGATTGTACCAGATCCTCCC 57.220 45.455 0.00 0.00 0.00 4.30
2027 2800 3.774734 ACCCATGTGTAGTAGAGTGTGA 58.225 45.455 0.00 0.00 0.00 3.58
2054 2827 8.608844 AGTGTTAGAGATTTCGTGAAAATTCT 57.391 30.769 13.15 13.15 37.70 2.40
2066 2840 9.814899 CAGATCACATCTTAGTGTTAGAGATTT 57.185 33.333 0.00 0.00 40.37 2.17
2199 2974 8.223177 ACGTATACATGATAATAGTAGGCTCC 57.777 38.462 0.00 0.00 0.00 4.70
2259 3034 2.706190 AGCCAAATATAGCCGTTCTCCT 59.294 45.455 0.00 0.00 0.00 3.69
2303 3078 9.413734 GGGTAGAATCTGTTTTAGTACCTACTA 57.586 37.037 0.00 0.00 37.73 1.82
2325 3100 0.546122 GCTGTCACATGATGGGGGTA 59.454 55.000 0.00 0.00 0.00 3.69
2373 3149 0.247736 GACCCTGCACGTCAAGAGAT 59.752 55.000 4.62 0.00 0.00 2.75
2574 3768 8.954834 TTTATACCCGTATTAAGTATCCTCCA 57.045 34.615 0.00 0.00 0.00 3.86
2597 3801 2.489329 CACTCACGATTCCCTGCAATTT 59.511 45.455 0.00 0.00 0.00 1.82
2598 3802 2.086869 CACTCACGATTCCCTGCAATT 58.913 47.619 0.00 0.00 0.00 2.32
2632 3836 4.680172 CGGTCAGAGATCTCAGCATCTTTT 60.680 45.833 24.39 0.00 32.94 2.27
2657 3861 1.395954 GAACTGGTAAATCGGCGAACC 59.604 52.381 19.64 19.64 0.00 3.62
2665 3869 8.157476 ACATATATCCACTGGAACTGGTAAATC 58.843 37.037 0.66 0.00 34.34 2.17
2713 3917 7.592938 CACTGTATAGCAAACCAATTGAGAAA 58.407 34.615 7.12 0.00 41.85 2.52
2725 3929 4.690748 GTCTTGAGTGCACTGTATAGCAAA 59.309 41.667 27.27 8.86 43.20 3.68
2833 4046 3.575630 CAGAGAGTTCGATCGGTTTGAA 58.424 45.455 16.41 0.00 0.00 2.69
2841 4054 6.019961 CAGTGAAAATAGCAGAGAGTTCGATC 60.020 42.308 0.00 0.00 0.00 3.69
2859 4072 5.072055 TCAAAGGCAAGATGATCAGTGAAA 58.928 37.500 0.09 0.00 0.00 2.69
2901 4565 3.701205 TCAGCAATGAAGCTCCTAACA 57.299 42.857 0.00 0.00 44.54 2.41
2902 4566 6.293845 CCATAATCAGCAATGAAGCTCCTAAC 60.294 42.308 0.00 0.00 44.54 2.34
2977 4641 3.316573 CTCCTGAAGGGACACCGCC 62.317 68.421 0.00 0.00 43.47 6.13
3030 4694 0.333993 AATGCCCCAGTGAGCTTGAT 59.666 50.000 6.66 0.00 0.00 2.57
3073 4740 6.552350 AGAACCACAACTCCACTAGTAACTTA 59.448 38.462 0.00 0.00 37.50 2.24
3076 4743 5.211174 AGAACCACAACTCCACTAGTAAC 57.789 43.478 0.00 0.00 37.50 2.50
3081 4748 5.047306 CACATCTAGAACCACAACTCCACTA 60.047 44.000 0.00 0.00 0.00 2.74
3082 4749 3.904339 ACATCTAGAACCACAACTCCACT 59.096 43.478 0.00 0.00 0.00 4.00
3083 4750 3.997021 CACATCTAGAACCACAACTCCAC 59.003 47.826 0.00 0.00 0.00 4.02
3084 4751 3.646162 ACACATCTAGAACCACAACTCCA 59.354 43.478 0.00 0.00 0.00 3.86
3085 4752 4.273148 ACACATCTAGAACCACAACTCC 57.727 45.455 0.00 0.00 0.00 3.85
3086 4753 5.047235 ACCTACACATCTAGAACCACAACTC 60.047 44.000 0.00 0.00 0.00 3.01
3087 4754 4.838986 ACCTACACATCTAGAACCACAACT 59.161 41.667 0.00 0.00 0.00 3.16
3088 4755 5.148651 ACCTACACATCTAGAACCACAAC 57.851 43.478 0.00 0.00 0.00 3.32
3121 4788 9.000486 GCTTTACTAAGTTTGGACTGTTAAGAT 58.000 33.333 0.00 0.00 35.91 2.40
3126 4793 8.919777 ATAAGCTTTACTAAGTTTGGACTGTT 57.080 30.769 3.20 0.00 35.83 3.16
3179 4846 7.533289 AATCCTGAAAGTAAATCCCGAAAAA 57.467 32.000 0.00 0.00 0.00 1.94
3184 4858 5.897377 ACAAATCCTGAAAGTAAATCCCG 57.103 39.130 0.00 0.00 0.00 5.14
3187 4861 7.865889 ACGGAAAACAAATCCTGAAAGTAAATC 59.134 33.333 0.00 0.00 34.66 2.17
3188 4862 7.722363 ACGGAAAACAAATCCTGAAAGTAAAT 58.278 30.769 0.00 0.00 34.66 1.40
3220 4894 3.671433 CGATGGCTGCAAATATGTATGCC 60.671 47.826 0.50 1.12 41.87 4.40
3226 4900 1.601162 GGCACGATGGCTGCAAATATG 60.601 52.381 0.50 0.00 40.14 1.78
3359 5033 5.806502 CACGACGTACCATAAATCCAAGTAA 59.193 40.000 0.00 0.00 0.00 2.24
3380 5054 9.011407 GTCTACAAGTAGAATGAATTAGACACG 57.989 37.037 11.24 0.00 43.12 4.49
3402 5076 5.552870 AAGGCTCACAAAAGAAGAGTCTA 57.447 39.130 0.00 0.00 43.03 2.59
3458 5153 9.709495 TTTTCACTAACATACACCGTTAACTAT 57.291 29.630 3.71 0.00 0.00 2.12
3461 5156 7.854534 ACTTTTCACTAACATACACCGTTAAC 58.145 34.615 0.00 0.00 0.00 2.01
3462 5157 8.977505 GTACTTTTCACTAACATACACCGTTAA 58.022 33.333 0.00 0.00 0.00 2.01
3464 5159 6.144402 CGTACTTTTCACTAACATACACCGTT 59.856 38.462 0.00 0.00 0.00 4.44
3465 5160 5.630680 CGTACTTTTCACTAACATACACCGT 59.369 40.000 0.00 0.00 0.00 4.83
3466 5161 5.858049 TCGTACTTTTCACTAACATACACCG 59.142 40.000 0.00 0.00 0.00 4.94
3467 5162 6.642131 TGTCGTACTTTTCACTAACATACACC 59.358 38.462 0.00 0.00 0.00 4.16
3469 5164 8.821147 ATTGTCGTACTTTTCACTAACATACA 57.179 30.769 0.00 0.00 0.00 2.29
3488 5355 8.355088 CACACAACGAATAAAAATGTATTGTCG 58.645 33.333 0.00 0.00 0.00 4.35
3530 5448 3.036091 TCCCCCTCCTCACTAATAAACG 58.964 50.000 0.00 0.00 0.00 3.60
3533 5451 6.699688 TCTTATTCCCCCTCCTCACTAATAA 58.300 40.000 0.00 0.00 0.00 1.40
3534 5452 6.303427 TCTTATTCCCCCTCCTCACTAATA 57.697 41.667 0.00 0.00 0.00 0.98
3539 5457 2.050918 CCTCTTATTCCCCCTCCTCAC 58.949 57.143 0.00 0.00 0.00 3.51
3542 5460 0.402126 GGCCTCTTATTCCCCCTCCT 60.402 60.000 0.00 0.00 0.00 3.69
3550 5468 4.199310 TGTACAATGCAGGCCTCTTATTC 58.801 43.478 0.00 0.00 0.00 1.75
3555 5473 2.814805 AATGTACAATGCAGGCCTCT 57.185 45.000 0.00 0.00 0.00 3.69
3567 5485 1.799403 CGTGCACGGGTAAAATGTACA 59.201 47.619 31.15 0.00 35.37 2.90
3580 5498 2.478894 AGTGATTTTTCTACCGTGCACG 59.521 45.455 31.77 31.77 39.44 5.34
3581 5499 3.746492 AGAGTGATTTTTCTACCGTGCAC 59.254 43.478 6.82 6.82 0.00 4.57
3582 5500 4.002906 AGAGTGATTTTTCTACCGTGCA 57.997 40.909 0.00 0.00 0.00 4.57
3583 5501 5.810587 TCATAGAGTGATTTTTCTACCGTGC 59.189 40.000 0.00 0.00 0.00 5.34
3587 5505 8.561738 TGGTTTCATAGAGTGATTTTTCTACC 57.438 34.615 0.00 0.00 36.54 3.18
3636 5606 5.831103 AGGGAAACATGACATGGTAAATCT 58.169 37.500 19.39 6.56 33.60 2.40
3658 5628 8.715998 GCACCATATTCACATACTATGAGAAAG 58.284 37.037 11.50 6.44 41.81 2.62
3692 5666 3.806625 ATGCCAATCAAACCACATAGC 57.193 42.857 0.00 0.00 0.00 2.97
3740 5714 2.754186 GCTTCTTGTATGCATGGGGGAT 60.754 50.000 10.16 0.00 0.00 3.85
3823 5797 0.622136 AGGGATGAGCAATGCAGACA 59.378 50.000 8.35 5.11 0.00 3.41
3827 5808 2.811410 AGAAAAGGGATGAGCAATGCA 58.189 42.857 8.35 0.00 0.00 3.96
3829 5810 8.255905 AGAAAAATAGAAAAGGGATGAGCAATG 58.744 33.333 0.00 0.00 0.00 2.82
3830 5811 8.255905 CAGAAAAATAGAAAAGGGATGAGCAAT 58.744 33.333 0.00 0.00 0.00 3.56
3848 5829 6.529125 CGCATCAGCTAAATTGACAGAAAAAT 59.471 34.615 0.00 0.00 39.10 1.82
3866 5848 2.953669 GCATCCTTTTGCGCATCAG 58.046 52.632 12.75 10.40 32.06 2.90
3879 5861 0.881118 TTTGGCAGTTCGAAGCATCC 59.119 50.000 11.04 5.45 0.00 3.51
4005 5987 6.500589 TGAAGGGGAAATGAGATAGTAAGG 57.499 41.667 0.00 0.00 0.00 2.69
4016 5998 2.761767 TGCATGACATGAAGGGGAAATG 59.238 45.455 19.76 0.00 0.00 2.32
4041 6023 4.260579 GCAAAAACCTTAAATGTGGTGTGC 60.261 41.667 0.00 0.00 36.57 4.57
4042 6024 4.872691 TGCAAAAACCTTAAATGTGGTGTG 59.127 37.500 0.00 0.00 36.57 3.82
4045 6027 4.126437 GCTGCAAAAACCTTAAATGTGGT 58.874 39.130 0.00 0.00 38.35 4.16
4046 6028 4.125703 TGCTGCAAAAACCTTAAATGTGG 58.874 39.130 0.00 0.00 0.00 4.17
4047 6029 5.049167 TCTGCTGCAAAAACCTTAAATGTG 58.951 37.500 3.02 0.00 0.00 3.21
4048 6030 5.275067 TCTGCTGCAAAAACCTTAAATGT 57.725 34.783 3.02 0.00 0.00 2.71
4049 6031 5.927689 TCATCTGCTGCAAAAACCTTAAATG 59.072 36.000 3.02 0.00 0.00 2.32
4050 6032 6.100404 TCATCTGCTGCAAAAACCTTAAAT 57.900 33.333 3.02 0.00 0.00 1.40
4051 6033 5.528043 TCATCTGCTGCAAAAACCTTAAA 57.472 34.783 3.02 0.00 0.00 1.52
4052 6034 5.726980 ATCATCTGCTGCAAAAACCTTAA 57.273 34.783 3.02 0.00 0.00 1.85
4053 6035 5.945784 AGTATCATCTGCTGCAAAAACCTTA 59.054 36.000 3.02 0.00 0.00 2.69
4054 6036 4.768968 AGTATCATCTGCTGCAAAAACCTT 59.231 37.500 3.02 0.00 0.00 3.50
4218 6570 5.824904 AATGTGCTTCGATATGCTTTCTT 57.175 34.783 7.02 0.00 0.00 2.52
4251 6603 3.254903 TGCTTAGTCTCTGCTCGTTAACA 59.745 43.478 6.39 0.00 0.00 2.41
4341 6693 0.324460 AGTAACCCCAGAGGACCGAG 60.324 60.000 0.00 0.00 39.89 4.63
4440 6792 5.332656 GCAGAATAGACATTACTTGTAGCGC 60.333 44.000 0.00 0.00 39.18 5.92
4499 6868 9.554724 TTATGAAATCGCTGAATCTTAACAAAC 57.445 29.630 0.00 0.00 0.00 2.93
4520 6906 5.804639 AGTGGTTAGTGCAATCTGTTATGA 58.195 37.500 0.00 0.00 0.00 2.15
4541 6934 4.565652 CCCTGCAAAGGTCACAATACTAGT 60.566 45.833 0.00 0.00 0.00 2.57
4542 6935 3.941483 CCCTGCAAAGGTCACAATACTAG 59.059 47.826 0.00 0.00 0.00 2.57
4598 6991 6.228995 ACATATATCGTTCTCGGAGACACTA 58.771 40.000 7.33 2.65 37.69 2.74
4850 7246 3.057033 GGCACTGCAGAGAATGAAACAAT 60.057 43.478 23.35 0.00 0.00 2.71
4873 7299 0.601558 TAGGACGACAGACACCTTGC 59.398 55.000 0.00 0.00 34.42 4.01
4883 7309 6.931838 AGTTTCAGATTAACATAGGACGACA 58.068 36.000 0.00 0.00 0.00 4.35
4913 7343 2.852495 TTCCTCCTGCGTGCGGAATC 62.852 60.000 1.35 0.00 31.00 2.52
4914 7344 2.859273 CTTCCTCCTGCGTGCGGAAT 62.859 60.000 1.35 0.00 35.21 3.01
4919 7349 1.817099 CCATCTTCCTCCTGCGTGC 60.817 63.158 0.00 0.00 0.00 5.34
4941 7375 1.406898 CTGTCGCAGCTTCCTGAGATA 59.593 52.381 0.75 0.00 46.98 1.98
4989 7423 1.153249 CCCACGGTGTGTTGTCAGT 60.153 57.895 7.45 0.00 0.00 3.41
4992 7426 1.597027 CTCCCCACGGTGTGTTGTC 60.597 63.158 7.45 0.00 0.00 3.18
5004 7438 2.752358 CTGTGCTTCAGCTCCCCA 59.248 61.111 0.00 0.00 42.66 4.96
5007 7441 1.073897 AACCCTGTGCTTCAGCTCC 59.926 57.895 0.00 0.00 42.38 4.70
5058 7492 1.606668 GGTTGAATGGCGTTTGAGTGA 59.393 47.619 0.00 0.00 0.00 3.41
5061 7495 2.664916 CTTGGTTGAATGGCGTTTGAG 58.335 47.619 0.00 0.00 0.00 3.02
5071 7505 3.126001 TCTTCAGACGCTTGGTTGAAT 57.874 42.857 0.00 0.00 30.66 2.57
5076 7510 3.258372 TGTTCTATCTTCAGACGCTTGGT 59.742 43.478 0.00 0.00 0.00 3.67
5106 7540 0.535797 GAAATCCTCGGTCGGTCCTT 59.464 55.000 0.00 0.00 0.00 3.36
5126 7560 6.462500 CCTCATTTCTGATAGAATCATCGGT 58.538 40.000 0.00 0.00 38.85 4.69
5166 7606 4.540153 GCATCCGGCAAAGAGCTA 57.460 55.556 0.00 0.00 44.79 3.32
5179 7619 3.130869 TCAGCCAACAATAATGGTGCATC 59.869 43.478 0.00 0.00 43.22 3.91
5196 7636 4.836825 ACAGTACCATATGCATATCAGCC 58.163 43.478 16.46 5.68 0.00 4.85
5318 7812 1.269448 ACAGTTTTGCGGCAATACCTG 59.731 47.619 25.69 24.54 35.61 4.00
5380 7880 2.132762 ACTCGTACGCTCAAACAAAGG 58.867 47.619 11.24 0.00 0.00 3.11
5383 7883 3.188492 TCAAACTCGTACGCTCAAACAA 58.812 40.909 11.24 0.00 0.00 2.83
5404 7904 8.944029 CATCCATAGATTCTCGAGCAATATTTT 58.056 33.333 7.81 0.00 0.00 1.82
5415 7915 2.288457 ACACGGCATCCATAGATTCTCG 60.288 50.000 0.00 0.00 0.00 4.04
5511 8023 4.095782 GCCATTCGGTTGTTAATTAGAGCA 59.904 41.667 0.00 0.00 33.28 4.26
5513 8025 6.436843 AAGCCATTCGGTTGTTAATTAGAG 57.563 37.500 0.00 0.00 33.28 2.43
5514 8026 6.431198 GAAGCCATTCGGTTGTTAATTAGA 57.569 37.500 0.00 0.00 30.54 2.10
5547 8059 7.697352 TGTTTGAAAATGATGTGACATGTTC 57.303 32.000 1.23 2.17 41.93 3.18
5548 8060 8.489990 TTTGTTTGAAAATGATGTGACATGTT 57.510 26.923 1.23 0.00 31.34 2.71
5592 8108 1.376037 GCCTGACCAAGACCGGAAG 60.376 63.158 9.46 0.00 0.00 3.46
5679 8198 2.273179 CGGTGGTGTTCGAGGAGGA 61.273 63.158 0.00 0.00 0.00 3.71
5680 8199 2.261671 CGGTGGTGTTCGAGGAGG 59.738 66.667 0.00 0.00 0.00 4.30
5681 8200 1.080705 GACGGTGGTGTTCGAGGAG 60.081 63.158 0.00 0.00 0.00 3.69
5741 8260 0.249784 CCACGGAGGCAGAGATCATG 60.250 60.000 0.00 0.00 0.00 3.07
6018 8537 3.119101 AGCGGGTACTACAAAGACATCAG 60.119 47.826 0.00 0.00 0.00 2.90
6026 8545 2.416296 CGTCATGAGCGGGTACTACAAA 60.416 50.000 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.