Multiple sequence alignment - TraesCS4D01G325700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G325700 chr4D 100.000 3150 0 0 1 3150 485684680 485681531 0.000000e+00 5818.0
1 TraesCS4D01G325700 chr4D 84.442 1729 148 71 569 2254 485764915 485763265 0.000000e+00 1591.0
2 TraesCS4D01G325700 chr4D 97.143 35 0 1 2764 2798 408803271 408803304 1.220000e-04 58.4
3 TraesCS4D01G325700 chr5A 92.079 1818 95 23 567 2359 666525994 666524201 0.000000e+00 2514.0
4 TraesCS4D01G325700 chr5A 86.552 1621 141 43 567 2146 666589252 666587668 0.000000e+00 1714.0
5 TraesCS4D01G325700 chr5A 85.872 1635 130 54 569 2146 666684112 666682522 0.000000e+00 1646.0
6 TraesCS4D01G325700 chr5A 84.033 1453 142 49 646 2043 666657383 666655966 0.000000e+00 1315.0
7 TraesCS4D01G325700 chr5A 88.583 254 25 3 2767 3017 666524150 666523898 3.950000e-79 305.0
8 TraesCS4D01G325700 chr5A 88.626 211 21 2 1939 2146 666656029 666655819 1.450000e-63 254.0
9 TraesCS4D01G325700 chr4B 90.705 1829 114 20 621 2414 619590313 619588506 0.000000e+00 2385.0
10 TraesCS4D01G325700 chr4B 86.541 1538 136 36 639 2146 619659801 619658305 0.000000e+00 1628.0
11 TraesCS4D01G325700 chr4B 85.574 1629 139 51 569 2146 619936186 619934603 0.000000e+00 1618.0
12 TraesCS4D01G325700 chr4B 86.601 1418 123 43 780 2146 619788169 619786768 0.000000e+00 1504.0
13 TraesCS4D01G325700 chr4B 83.132 1571 140 62 642 2146 619775241 619773730 0.000000e+00 1317.0
14 TraesCS4D01G325700 chr4B 93.275 342 17 5 2592 2929 619588353 619588014 1.690000e-137 499.0
15 TraesCS4D01G325700 chr4B 90.805 174 10 5 2929 3097 619587792 619587620 8.790000e-56 228.0
16 TraesCS4D01G325700 chr4B 97.143 35 0 1 2764 2798 507242658 507242625 1.220000e-04 58.4
17 TraesCS4D01G325700 chr7D 86.047 473 53 10 7 473 159709767 159709302 2.180000e-136 496.0
18 TraesCS4D01G325700 chr6D 87.294 425 50 2 50 470 72136069 72136493 1.700000e-132 483.0
19 TraesCS4D01G325700 chr6D 83.678 484 63 10 1 473 56836637 56837115 2.880000e-120 442.0
20 TraesCS4D01G325700 chr2D 86.605 433 54 2 45 473 70946141 70946573 2.840000e-130 475.0
21 TraesCS4D01G325700 chr2D 86.449 428 52 4 48 473 429466850 429467273 6.150000e-127 464.0
22 TraesCS4D01G325700 chr2D 94.737 57 2 1 2421 2476 24449942 24449886 1.560000e-13 87.9
23 TraesCS4D01G325700 chr7A 84.774 486 59 11 1 473 692773379 692773862 1.020000e-129 473.0
24 TraesCS4D01G325700 chr7A 96.429 56 2 0 2421 2476 725720128 725720073 3.350000e-15 93.5
25 TraesCS4D01G325700 chr6A 84.861 469 67 2 8 473 593230953 593231420 1.320000e-128 470.0
26 TraesCS4D01G325700 chr5D 84.802 454 65 2 7 456 528136928 528136475 1.330000e-123 453.0
27 TraesCS4D01G325700 chr5B 84.000 475 62 8 10 473 390551615 390551144 8.020000e-121 444.0
28 TraesCS4D01G325700 chr4A 87.671 146 11 2 2432 2571 666520118 666520262 2.510000e-36 163.0
29 TraesCS4D01G325700 chr4A 90.000 110 9 2 2421 2528 326004928 326005037 1.180000e-29 141.0
30 TraesCS4D01G325700 chr4A 94.286 35 2 0 494 528 121159362 121159396 2.000000e-03 54.7
31 TraesCS4D01G325700 chr2B 88.462 78 9 0 2421 2498 68607849 68607926 9.300000e-16 95.3
32 TraesCS4D01G325700 chr2B 100.000 31 0 0 2541 2571 68607930 68607960 1.220000e-04 58.4
33 TraesCS4D01G325700 chr3B 84.043 94 11 3 477 567 75664134 75664042 1.560000e-13 87.9
34 TraesCS4D01G325700 chr1A 91.935 62 5 0 506 567 589861977 589861916 1.560000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G325700 chr4D 485681531 485684680 3149 True 5818.000000 5818 100.0000 1 3150 1 chr4D.!!$R1 3149
1 TraesCS4D01G325700 chr4D 485763265 485764915 1650 True 1591.000000 1591 84.4420 569 2254 1 chr4D.!!$R2 1685
2 TraesCS4D01G325700 chr5A 666587668 666589252 1584 True 1714.000000 1714 86.5520 567 2146 1 chr5A.!!$R1 1579
3 TraesCS4D01G325700 chr5A 666682522 666684112 1590 True 1646.000000 1646 85.8720 569 2146 1 chr5A.!!$R2 1577
4 TraesCS4D01G325700 chr5A 666523898 666525994 2096 True 1409.500000 2514 90.3310 567 3017 2 chr5A.!!$R3 2450
5 TraesCS4D01G325700 chr5A 666655819 666657383 1564 True 784.500000 1315 86.3295 646 2146 2 chr5A.!!$R4 1500
6 TraesCS4D01G325700 chr4B 619658305 619659801 1496 True 1628.000000 1628 86.5410 639 2146 1 chr4B.!!$R2 1507
7 TraesCS4D01G325700 chr4B 619934603 619936186 1583 True 1618.000000 1618 85.5740 569 2146 1 chr4B.!!$R5 1577
8 TraesCS4D01G325700 chr4B 619786768 619788169 1401 True 1504.000000 1504 86.6010 780 2146 1 chr4B.!!$R4 1366
9 TraesCS4D01G325700 chr4B 619773730 619775241 1511 True 1317.000000 1317 83.1320 642 2146 1 chr4B.!!$R3 1504
10 TraesCS4D01G325700 chr4B 619587620 619590313 2693 True 1037.333333 2385 91.5950 621 3097 3 chr4B.!!$R6 2476

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
415 416 0.030101 CGATGGAGGAGACGAGCTTC 59.970 60.0 0.0 0.0 0.00 3.86 F
416 417 0.030101 GATGGAGGAGACGAGCTTCG 59.970 60.0 0.0 0.0 46.93 3.79 F
505 506 0.179181 TCGTCTCGGTCGGAAAATCG 60.179 55.0 0.0 0.0 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1274 1393 0.034767 ATCCCTGCACATCCACACAG 60.035 55.0 0.00 0.0 0.00 3.66 R
1959 2171 0.321919 ACTGCACATGTTCGGCATCT 60.322 50.0 9.51 0.0 36.87 2.90 R
2481 2794 0.389025 CTGTTTTTCACTGGGTGGGC 59.611 55.0 0.00 0.0 33.87 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.096791 GATGAACTGCTGCTCCGC 58.903 61.111 0.00 0.00 0.00 5.54
18 19 1.742880 GATGAACTGCTGCTCCGCA 60.743 57.895 0.00 0.00 38.40 5.69
19 20 1.077930 ATGAACTGCTGCTCCGCAT 60.078 52.632 0.00 0.00 39.52 4.73
20 21 1.374343 ATGAACTGCTGCTCCGCATG 61.374 55.000 0.00 0.00 39.52 4.06
21 22 3.392595 GAACTGCTGCTCCGCATGC 62.393 63.158 7.91 7.91 39.52 4.06
22 23 4.710167 ACTGCTGCTCCGCATGCA 62.710 61.111 19.57 0.00 39.52 3.96
27 28 2.905681 TGCTCCGCATGCAGATCT 59.094 55.556 19.57 0.00 35.31 2.75
28 29 1.523032 TGCTCCGCATGCAGATCTG 60.523 57.895 18.84 18.84 35.31 2.90
38 39 4.291047 CAGATCTGCGTTGCCAGT 57.709 55.556 10.38 0.00 34.47 4.00
39 40 1.792301 CAGATCTGCGTTGCCAGTG 59.208 57.895 10.38 0.00 34.47 3.66
40 41 0.952497 CAGATCTGCGTTGCCAGTGT 60.952 55.000 10.38 0.00 34.47 3.55
41 42 0.671781 AGATCTGCGTTGCCAGTGTC 60.672 55.000 0.00 0.00 34.47 3.67
42 43 0.671781 GATCTGCGTTGCCAGTGTCT 60.672 55.000 0.00 0.00 34.47 3.41
43 44 0.671781 ATCTGCGTTGCCAGTGTCTC 60.672 55.000 0.00 0.00 34.47 3.36
44 45 2.280797 TGCGTTGCCAGTGTCTCC 60.281 61.111 0.00 0.00 0.00 3.71
45 46 3.050275 GCGTTGCCAGTGTCTCCC 61.050 66.667 0.00 0.00 0.00 4.30
46 47 2.425592 CGTTGCCAGTGTCTCCCA 59.574 61.111 0.00 0.00 0.00 4.37
47 48 1.961277 CGTTGCCAGTGTCTCCCAC 60.961 63.158 0.00 0.00 44.89 4.61
55 56 2.998493 GTGTCTCCCACATCCTCCT 58.002 57.895 0.00 0.00 43.92 3.69
56 57 0.827368 GTGTCTCCCACATCCTCCTC 59.173 60.000 0.00 0.00 43.92 3.71
57 58 0.325671 TGTCTCCCACATCCTCCTCC 60.326 60.000 0.00 0.00 0.00 4.30
58 59 0.031616 GTCTCCCACATCCTCCTCCT 60.032 60.000 0.00 0.00 0.00 3.69
59 60 0.263172 TCTCCCACATCCTCCTCCTC 59.737 60.000 0.00 0.00 0.00 3.71
60 61 0.762461 CTCCCACATCCTCCTCCTCC 60.762 65.000 0.00 0.00 0.00 4.30
61 62 1.231751 TCCCACATCCTCCTCCTCCT 61.232 60.000 0.00 0.00 0.00 3.69
62 63 0.762461 CCCACATCCTCCTCCTCCTC 60.762 65.000 0.00 0.00 0.00 3.71
63 64 0.762461 CCACATCCTCCTCCTCCTCC 60.762 65.000 0.00 0.00 0.00 4.30
64 65 0.264359 CACATCCTCCTCCTCCTCCT 59.736 60.000 0.00 0.00 0.00 3.69
65 66 1.022903 ACATCCTCCTCCTCCTCCTT 58.977 55.000 0.00 0.00 0.00 3.36
66 67 1.062505 ACATCCTCCTCCTCCTCCTTC 60.063 57.143 0.00 0.00 0.00 3.46
67 68 1.220236 CATCCTCCTCCTCCTCCTTCT 59.780 57.143 0.00 0.00 0.00 2.85
68 69 0.930726 TCCTCCTCCTCCTCCTTCTC 59.069 60.000 0.00 0.00 0.00 2.87
69 70 0.105709 CCTCCTCCTCCTCCTTCTCC 60.106 65.000 0.00 0.00 0.00 3.71
70 71 0.633921 CTCCTCCTCCTCCTTCTCCA 59.366 60.000 0.00 0.00 0.00 3.86
71 72 0.336737 TCCTCCTCCTCCTTCTCCAC 59.663 60.000 0.00 0.00 0.00 4.02
72 73 0.689412 CCTCCTCCTCCTTCTCCACC 60.689 65.000 0.00 0.00 0.00 4.61
73 74 0.041833 CTCCTCCTCCTTCTCCACCA 59.958 60.000 0.00 0.00 0.00 4.17
74 75 0.491823 TCCTCCTCCTTCTCCACCAA 59.508 55.000 0.00 0.00 0.00 3.67
75 76 0.615850 CCTCCTCCTTCTCCACCAAC 59.384 60.000 0.00 0.00 0.00 3.77
76 77 1.352083 CTCCTCCTTCTCCACCAACA 58.648 55.000 0.00 0.00 0.00 3.33
77 78 1.002544 CTCCTCCTTCTCCACCAACAC 59.997 57.143 0.00 0.00 0.00 3.32
78 79 0.036875 CCTCCTTCTCCACCAACACC 59.963 60.000 0.00 0.00 0.00 4.16
79 80 1.059913 CTCCTTCTCCACCAACACCT 58.940 55.000 0.00 0.00 0.00 4.00
80 81 1.002544 CTCCTTCTCCACCAACACCTC 59.997 57.143 0.00 0.00 0.00 3.85
81 82 0.036875 CCTTCTCCACCAACACCTCC 59.963 60.000 0.00 0.00 0.00 4.30
82 83 1.059913 CTTCTCCACCAACACCTCCT 58.940 55.000 0.00 0.00 0.00 3.69
83 84 1.002544 CTTCTCCACCAACACCTCCTC 59.997 57.143 0.00 0.00 0.00 3.71
84 85 0.836400 TCTCCACCAACACCTCCTCC 60.836 60.000 0.00 0.00 0.00 4.30
85 86 0.838122 CTCCACCAACACCTCCTCCT 60.838 60.000 0.00 0.00 0.00 3.69
86 87 0.836400 TCCACCAACACCTCCTCCTC 60.836 60.000 0.00 0.00 0.00 3.71
87 88 1.679898 CACCAACACCTCCTCCTCC 59.320 63.158 0.00 0.00 0.00 4.30
88 89 0.838122 CACCAACACCTCCTCCTCCT 60.838 60.000 0.00 0.00 0.00 3.69
89 90 0.545548 ACCAACACCTCCTCCTCCTC 60.546 60.000 0.00 0.00 0.00 3.71
90 91 1.268283 CCAACACCTCCTCCTCCTCC 61.268 65.000 0.00 0.00 0.00 4.30
91 92 0.252467 CAACACCTCCTCCTCCTCCT 60.252 60.000 0.00 0.00 0.00 3.69
92 93 0.041982 AACACCTCCTCCTCCTCCTC 59.958 60.000 0.00 0.00 0.00 3.71
93 94 1.075600 CACCTCCTCCTCCTCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
94 95 1.230819 ACCTCCTCCTCCTCCTCCT 60.231 63.158 0.00 0.00 0.00 3.69
95 96 1.293683 ACCTCCTCCTCCTCCTCCTC 61.294 65.000 0.00 0.00 0.00 3.71
96 97 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
97 98 1.230650 TCCTCCTCCTCCTCCTCCA 60.231 63.158 0.00 0.00 0.00 3.86
98 99 0.855855 TCCTCCTCCTCCTCCTCCAA 60.856 60.000 0.00 0.00 0.00 3.53
99 100 0.689412 CCTCCTCCTCCTCCTCCAAC 60.689 65.000 0.00 0.00 0.00 3.77
100 101 0.338120 CTCCTCCTCCTCCTCCAACT 59.662 60.000 0.00 0.00 0.00 3.16
101 102 0.336737 TCCTCCTCCTCCTCCAACTC 59.663 60.000 0.00 0.00 0.00 3.01
102 103 0.689412 CCTCCTCCTCCTCCAACTCC 60.689 65.000 0.00 0.00 0.00 3.85
103 104 0.338120 CTCCTCCTCCTCCAACTCCT 59.662 60.000 0.00 0.00 0.00 3.69
104 105 0.793617 TCCTCCTCCTCCAACTCCTT 59.206 55.000 0.00 0.00 0.00 3.36
105 106 1.199615 CCTCCTCCTCCAACTCCTTC 58.800 60.000 0.00 0.00 0.00 3.46
106 107 1.273552 CCTCCTCCTCCAACTCCTTCT 60.274 57.143 0.00 0.00 0.00 2.85
107 108 2.107366 CTCCTCCTCCAACTCCTTCTC 58.893 57.143 0.00 0.00 0.00 2.87
108 109 1.199615 CCTCCTCCAACTCCTTCTCC 58.800 60.000 0.00 0.00 0.00 3.71
109 110 0.820871 CTCCTCCAACTCCTTCTCCG 59.179 60.000 0.00 0.00 0.00 4.63
110 111 0.614979 TCCTCCAACTCCTTCTCCGG 60.615 60.000 0.00 0.00 0.00 5.14
111 112 0.614979 CCTCCAACTCCTTCTCCGGA 60.615 60.000 2.93 2.93 0.00 5.14
112 113 1.490574 CTCCAACTCCTTCTCCGGAT 58.509 55.000 3.57 0.00 31.43 4.18
113 114 1.410882 CTCCAACTCCTTCTCCGGATC 59.589 57.143 3.57 0.00 31.43 3.36
114 115 0.466124 CCAACTCCTTCTCCGGATCC 59.534 60.000 3.57 0.00 31.43 3.36
115 116 1.195115 CAACTCCTTCTCCGGATCCA 58.805 55.000 13.41 0.00 31.43 3.41
116 117 1.137872 CAACTCCTTCTCCGGATCCAG 59.862 57.143 13.41 0.00 31.43 3.86
117 118 0.336737 ACTCCTTCTCCGGATCCAGT 59.663 55.000 13.41 1.63 31.43 4.00
118 119 0.749649 CTCCTTCTCCGGATCCAGTG 59.250 60.000 13.41 1.05 31.43 3.66
119 120 1.144936 CCTTCTCCGGATCCAGTGC 59.855 63.158 13.41 0.00 0.00 4.40
120 121 1.617018 CCTTCTCCGGATCCAGTGCA 61.617 60.000 13.41 0.00 0.00 4.57
121 122 0.467384 CTTCTCCGGATCCAGTGCAT 59.533 55.000 13.41 0.00 0.00 3.96
122 123 0.465705 TTCTCCGGATCCAGTGCATC 59.534 55.000 13.41 0.00 0.00 3.91
123 124 1.070445 CTCCGGATCCAGTGCATCC 59.930 63.158 13.41 2.60 37.10 3.51
126 127 3.230284 GGATCCAGTGCATCCGGA 58.770 61.111 6.61 6.61 30.62 5.14
127 128 1.070445 GGATCCAGTGCATCCGGAG 59.930 63.158 11.34 3.17 30.62 4.63
128 129 1.402896 GGATCCAGTGCATCCGGAGA 61.403 60.000 11.34 0.00 30.62 3.71
129 130 0.683973 GATCCAGTGCATCCGGAGAT 59.316 55.000 11.34 4.90 30.84 2.75
130 131 1.895798 GATCCAGTGCATCCGGAGATA 59.104 52.381 11.34 0.00 30.84 1.98
131 132 1.332195 TCCAGTGCATCCGGAGATAG 58.668 55.000 11.34 0.48 0.00 2.08
132 133 0.320247 CCAGTGCATCCGGAGATAGC 60.320 60.000 11.34 12.02 0.00 2.97
133 134 0.320247 CAGTGCATCCGGAGATAGCC 60.320 60.000 11.34 5.93 0.00 3.93
134 135 1.004440 GTGCATCCGGAGATAGCCC 60.004 63.158 11.34 0.00 0.00 5.19
135 136 2.217038 TGCATCCGGAGATAGCCCC 61.217 63.158 11.34 0.00 0.00 5.80
136 137 2.973899 CATCCGGAGATAGCCCCG 59.026 66.667 11.34 0.00 44.94 5.73
137 138 2.997897 ATCCGGAGATAGCCCCGC 60.998 66.667 11.34 0.00 44.07 6.13
158 159 4.162690 GATCCGGGCTTCGCACCT 62.163 66.667 0.00 0.00 37.59 4.00
159 160 2.762459 ATCCGGGCTTCGCACCTA 60.762 61.111 0.00 0.00 37.59 3.08
160 161 2.701163 GATCCGGGCTTCGCACCTAG 62.701 65.000 0.00 0.00 37.59 3.02
166 167 3.458163 CTTCGCACCTAGCCCGGA 61.458 66.667 0.73 0.00 41.38 5.14
167 168 2.762459 TTCGCACCTAGCCCGGAT 60.762 61.111 0.73 0.00 41.38 4.18
168 169 2.701163 CTTCGCACCTAGCCCGGATC 62.701 65.000 0.73 0.00 41.38 3.36
169 170 3.227276 CGCACCTAGCCCGGATCT 61.227 66.667 0.73 1.47 41.38 2.75
170 171 2.423446 GCACCTAGCCCGGATCTG 59.577 66.667 0.73 0.00 37.23 2.90
171 172 2.423446 CACCTAGCCCGGATCTGC 59.577 66.667 0.73 0.00 0.00 4.26
172 173 2.136878 CACCTAGCCCGGATCTGCT 61.137 63.158 0.73 5.40 41.57 4.24
173 174 1.834822 ACCTAGCCCGGATCTGCTC 60.835 63.158 0.73 0.00 39.00 4.26
174 175 1.834378 CCTAGCCCGGATCTGCTCA 60.834 63.158 0.73 0.00 39.00 4.26
175 176 1.402896 CCTAGCCCGGATCTGCTCAA 61.403 60.000 0.73 0.00 39.00 3.02
176 177 0.033228 CTAGCCCGGATCTGCTCAAG 59.967 60.000 0.73 0.00 39.00 3.02
177 178 1.402896 TAGCCCGGATCTGCTCAAGG 61.403 60.000 0.73 0.00 39.00 3.61
178 179 2.735772 GCCCGGATCTGCTCAAGGA 61.736 63.158 0.73 0.00 0.00 3.36
179 180 1.445095 CCCGGATCTGCTCAAGGAG 59.555 63.158 0.73 0.00 34.56 3.69
188 189 2.103934 CTCAAGGAGCTCGAGCCG 59.896 66.667 32.94 16.58 43.38 5.52
189 190 3.423162 CTCAAGGAGCTCGAGCCGG 62.423 68.421 32.94 17.76 43.38 6.13
194 195 4.863925 GAGCTCGAGCCGGCACTC 62.864 72.222 32.94 21.41 43.38 3.51
205 206 2.268920 GGCACTCCGGCATCAGAA 59.731 61.111 0.00 0.00 40.76 3.02
206 207 1.377202 GGCACTCCGGCATCAGAAA 60.377 57.895 0.00 0.00 40.76 2.52
207 208 0.749454 GGCACTCCGGCATCAGAAAT 60.749 55.000 0.00 0.00 40.76 2.17
208 209 0.379669 GCACTCCGGCATCAGAAATG 59.620 55.000 0.00 0.00 0.00 2.32
209 210 1.019673 CACTCCGGCATCAGAAATGG 58.980 55.000 0.00 0.00 0.00 3.16
210 211 0.620556 ACTCCGGCATCAGAAATGGT 59.379 50.000 0.00 0.00 0.00 3.55
211 212 1.004745 ACTCCGGCATCAGAAATGGTT 59.995 47.619 0.00 0.00 0.00 3.67
212 213 1.672881 CTCCGGCATCAGAAATGGTTC 59.327 52.381 0.00 0.00 0.00 3.62
213 214 0.378257 CCGGCATCAGAAATGGTTCG 59.622 55.000 0.00 0.00 38.90 3.95
214 215 0.248215 CGGCATCAGAAATGGTTCGC 60.248 55.000 0.00 0.00 38.90 4.70
215 216 1.098050 GGCATCAGAAATGGTTCGCT 58.902 50.000 0.00 0.00 38.90 4.93
216 217 1.474077 GGCATCAGAAATGGTTCGCTT 59.526 47.619 0.00 0.00 38.90 4.68
217 218 2.478539 GGCATCAGAAATGGTTCGCTTC 60.479 50.000 0.00 0.00 38.90 3.86
218 219 2.421424 GCATCAGAAATGGTTCGCTTCT 59.579 45.455 0.00 0.00 38.90 2.85
219 220 3.486542 GCATCAGAAATGGTTCGCTTCTC 60.487 47.826 0.00 0.00 38.90 2.87
220 221 3.401033 TCAGAAATGGTTCGCTTCTCA 57.599 42.857 0.00 0.00 38.90 3.27
221 222 3.067106 TCAGAAATGGTTCGCTTCTCAC 58.933 45.455 0.00 0.00 38.90 3.51
222 223 2.160417 CAGAAATGGTTCGCTTCTCACC 59.840 50.000 0.00 0.00 38.90 4.02
223 224 1.468914 GAAATGGTTCGCTTCTCACCC 59.531 52.381 0.00 0.00 0.00 4.61
224 225 0.673644 AATGGTTCGCTTCTCACCCG 60.674 55.000 0.00 0.00 0.00 5.28
225 226 2.434359 GGTTCGCTTCTCACCCGG 60.434 66.667 0.00 0.00 0.00 5.73
226 227 3.119096 GTTCGCTTCTCACCCGGC 61.119 66.667 0.00 0.00 0.00 6.13
245 246 4.489771 GCGTGGGGCATGGCTACT 62.490 66.667 19.78 0.00 42.87 2.57
246 247 3.101796 GCGTGGGGCATGGCTACTA 62.102 63.158 19.78 0.00 42.87 1.82
247 248 1.069765 CGTGGGGCATGGCTACTAG 59.930 63.158 19.78 7.19 0.00 2.57
248 249 1.451936 GTGGGGCATGGCTACTAGG 59.548 63.158 19.78 0.00 0.00 3.02
249 250 2.432123 GGGGCATGGCTACTAGGC 59.568 66.667 19.78 2.59 41.77 3.93
250 251 2.031163 GGGCATGGCTACTAGGCG 59.969 66.667 19.78 0.00 44.78 5.52
251 252 2.031163 GGCATGGCTACTAGGCGG 59.969 66.667 12.86 1.69 44.78 6.13
252 253 2.507854 GGCATGGCTACTAGGCGGA 61.508 63.158 12.86 0.00 44.78 5.54
253 254 1.301009 GCATGGCTACTAGGCGGAC 60.301 63.158 5.24 0.00 44.78 4.79
254 255 1.007271 CATGGCTACTAGGCGGACG 60.007 63.158 5.24 0.00 44.78 4.79
255 256 2.201022 ATGGCTACTAGGCGGACGG 61.201 63.158 5.24 0.00 44.78 4.79
256 257 2.517875 GGCTACTAGGCGGACGGA 60.518 66.667 0.00 0.00 0.00 4.69
257 258 1.902432 GGCTACTAGGCGGACGGAT 60.902 63.158 0.00 0.00 0.00 4.18
258 259 1.286260 GCTACTAGGCGGACGGATG 59.714 63.158 0.00 0.00 0.00 3.51
259 260 1.957562 CTACTAGGCGGACGGATGG 59.042 63.158 0.00 0.00 0.00 3.51
260 261 0.536687 CTACTAGGCGGACGGATGGA 60.537 60.000 0.00 0.00 0.00 3.41
261 262 0.536687 TACTAGGCGGACGGATGGAG 60.537 60.000 0.00 0.00 0.00 3.86
262 263 1.828660 CTAGGCGGACGGATGGAGT 60.829 63.158 0.00 0.00 0.00 3.85
263 264 2.076622 CTAGGCGGACGGATGGAGTG 62.077 65.000 0.00 0.00 0.00 3.51
264 265 4.530857 GGCGGACGGATGGAGTGG 62.531 72.222 0.00 0.00 0.00 4.00
265 266 3.458163 GCGGACGGATGGAGTGGA 61.458 66.667 0.00 0.00 0.00 4.02
266 267 3.014085 GCGGACGGATGGAGTGGAA 62.014 63.158 0.00 0.00 0.00 3.53
267 268 1.594833 CGGACGGATGGAGTGGAAA 59.405 57.895 0.00 0.00 0.00 3.13
268 269 0.460284 CGGACGGATGGAGTGGAAAG 60.460 60.000 0.00 0.00 0.00 2.62
269 270 0.613777 GGACGGATGGAGTGGAAAGT 59.386 55.000 0.00 0.00 0.00 2.66
270 271 1.676014 GGACGGATGGAGTGGAAAGTG 60.676 57.143 0.00 0.00 0.00 3.16
271 272 0.324943 ACGGATGGAGTGGAAAGTGG 59.675 55.000 0.00 0.00 0.00 4.00
272 273 1.026718 CGGATGGAGTGGAAAGTGGC 61.027 60.000 0.00 0.00 0.00 5.01
273 274 1.026718 GGATGGAGTGGAAAGTGGCG 61.027 60.000 0.00 0.00 0.00 5.69
274 275 1.002134 ATGGAGTGGAAAGTGGCGG 60.002 57.895 0.00 0.00 0.00 6.13
275 276 3.056328 GGAGTGGAAAGTGGCGGC 61.056 66.667 0.00 0.00 0.00 6.53
276 277 3.423154 GAGTGGAAAGTGGCGGCG 61.423 66.667 0.51 0.51 0.00 6.46
290 291 4.821589 GGCGGCGGACAAGAGGAG 62.822 72.222 9.78 0.00 0.00 3.69
291 292 4.821589 GCGGCGGACAAGAGGAGG 62.822 72.222 9.78 0.00 0.00 4.30
292 293 3.068691 CGGCGGACAAGAGGAGGA 61.069 66.667 0.00 0.00 0.00 3.71
293 294 2.646175 CGGCGGACAAGAGGAGGAA 61.646 63.158 0.00 0.00 0.00 3.36
294 295 1.677552 GGCGGACAAGAGGAGGAAA 59.322 57.895 0.00 0.00 0.00 3.13
295 296 0.036306 GGCGGACAAGAGGAGGAAAA 59.964 55.000 0.00 0.00 0.00 2.29
296 297 1.340114 GGCGGACAAGAGGAGGAAAAT 60.340 52.381 0.00 0.00 0.00 1.82
297 298 2.093128 GGCGGACAAGAGGAGGAAAATA 60.093 50.000 0.00 0.00 0.00 1.40
298 299 3.433740 GGCGGACAAGAGGAGGAAAATAT 60.434 47.826 0.00 0.00 0.00 1.28
299 300 3.561725 GCGGACAAGAGGAGGAAAATATG 59.438 47.826 0.00 0.00 0.00 1.78
300 301 4.130118 CGGACAAGAGGAGGAAAATATGG 58.870 47.826 0.00 0.00 0.00 2.74
301 302 4.141711 CGGACAAGAGGAGGAAAATATGGA 60.142 45.833 0.00 0.00 0.00 3.41
302 303 5.455326 CGGACAAGAGGAGGAAAATATGGAT 60.455 44.000 0.00 0.00 0.00 3.41
303 304 5.767168 GGACAAGAGGAGGAAAATATGGATG 59.233 44.000 0.00 0.00 0.00 3.51
304 305 6.332976 ACAAGAGGAGGAAAATATGGATGT 57.667 37.500 0.00 0.00 0.00 3.06
305 306 7.420214 GGACAAGAGGAGGAAAATATGGATGTA 60.420 40.741 0.00 0.00 0.00 2.29
306 307 8.050316 ACAAGAGGAGGAAAATATGGATGTAT 57.950 34.615 0.00 0.00 0.00 2.29
307 308 7.941238 ACAAGAGGAGGAAAATATGGATGTATG 59.059 37.037 0.00 0.00 0.00 2.39
308 309 7.025520 AGAGGAGGAAAATATGGATGTATGG 57.974 40.000 0.00 0.00 0.00 2.74
309 310 6.564152 AGAGGAGGAAAATATGGATGTATGGT 59.436 38.462 0.00 0.00 0.00 3.55
310 311 6.784031 AGGAGGAAAATATGGATGTATGGTC 58.216 40.000 0.00 0.00 0.00 4.02
311 312 6.564152 AGGAGGAAAATATGGATGTATGGTCT 59.436 38.462 0.00 0.00 0.00 3.85
312 313 6.656693 GGAGGAAAATATGGATGTATGGTCTG 59.343 42.308 0.00 0.00 0.00 3.51
313 314 6.546484 AGGAAAATATGGATGTATGGTCTGG 58.454 40.000 0.00 0.00 0.00 3.86
314 315 6.103205 AGGAAAATATGGATGTATGGTCTGGT 59.897 38.462 0.00 0.00 0.00 4.00
315 316 6.777580 GGAAAATATGGATGTATGGTCTGGTT 59.222 38.462 0.00 0.00 0.00 3.67
316 317 7.287696 GGAAAATATGGATGTATGGTCTGGTTT 59.712 37.037 0.00 0.00 0.00 3.27
317 318 7.823745 AAATATGGATGTATGGTCTGGTTTC 57.176 36.000 0.00 0.00 0.00 2.78
318 319 3.260475 TGGATGTATGGTCTGGTTTCG 57.740 47.619 0.00 0.00 0.00 3.46
319 320 2.093181 TGGATGTATGGTCTGGTTTCGG 60.093 50.000 0.00 0.00 0.00 4.30
320 321 2.093128 GGATGTATGGTCTGGTTTCGGT 60.093 50.000 0.00 0.00 0.00 4.69
321 322 2.465860 TGTATGGTCTGGTTTCGGTG 57.534 50.000 0.00 0.00 0.00 4.94
322 323 1.084289 GTATGGTCTGGTTTCGGTGC 58.916 55.000 0.00 0.00 0.00 5.01
323 324 0.035820 TATGGTCTGGTTTCGGTGCC 60.036 55.000 0.00 0.00 0.00 5.01
324 325 3.047877 GGTCTGGTTTCGGTGCCG 61.048 66.667 3.94 3.94 41.35 5.69
325 326 3.723348 GTCTGGTTTCGGTGCCGC 61.723 66.667 5.64 0.00 39.59 6.53
336 337 2.509786 GTGCCGCCGGTCGAATTA 60.510 61.111 17.96 1.08 41.67 1.40
337 338 2.101835 GTGCCGCCGGTCGAATTAA 61.102 57.895 17.96 0.00 41.67 1.40
338 339 1.375652 TGCCGCCGGTCGAATTAAA 60.376 52.632 17.96 0.00 41.67 1.52
339 340 0.745128 TGCCGCCGGTCGAATTAAAT 60.745 50.000 17.96 0.00 41.67 1.40
340 341 1.219646 GCCGCCGGTCGAATTAAATA 58.780 50.000 17.96 0.00 41.67 1.40
341 342 1.193874 GCCGCCGGTCGAATTAAATAG 59.806 52.381 17.96 1.53 41.67 1.73
342 343 2.476821 CCGCCGGTCGAATTAAATAGT 58.523 47.619 17.96 0.00 41.67 2.12
343 344 2.473984 CCGCCGGTCGAATTAAATAGTC 59.526 50.000 17.96 0.00 41.67 2.59
344 345 2.152489 CGCCGGTCGAATTAAATAGTCG 59.848 50.000 12.11 0.00 41.67 4.18
345 346 2.473984 GCCGGTCGAATTAAATAGTCGG 59.526 50.000 1.90 0.00 35.51 4.79
346 347 3.054878 CCGGTCGAATTAAATAGTCGGG 58.945 50.000 0.00 0.00 35.51 5.14
347 348 2.473984 CGGTCGAATTAAATAGTCGGGC 59.526 50.000 0.00 0.00 35.51 6.13
348 349 3.725490 GGTCGAATTAAATAGTCGGGCT 58.275 45.455 0.00 0.00 35.51 5.19
349 350 3.493503 GGTCGAATTAAATAGTCGGGCTG 59.506 47.826 0.00 0.00 35.51 4.85
350 351 3.493503 GTCGAATTAAATAGTCGGGCTGG 59.506 47.826 0.00 0.00 35.51 4.85
351 352 2.806244 CGAATTAAATAGTCGGGCTGGG 59.194 50.000 0.00 0.00 0.00 4.45
352 353 2.271944 ATTAAATAGTCGGGCTGGGC 57.728 50.000 0.00 0.00 0.00 5.36
353 354 0.913205 TTAAATAGTCGGGCTGGGCA 59.087 50.000 0.00 0.00 0.00 5.36
354 355 0.179468 TAAATAGTCGGGCTGGGCAC 59.821 55.000 0.00 0.00 0.00 5.01
355 356 1.562672 AAATAGTCGGGCTGGGCACT 61.563 55.000 0.00 0.00 0.00 4.40
356 357 0.689745 AATAGTCGGGCTGGGCACTA 60.690 55.000 0.00 0.00 0.00 2.74
357 358 1.400530 ATAGTCGGGCTGGGCACTAC 61.401 60.000 0.00 0.00 0.00 2.73
358 359 4.814294 GTCGGGCTGGGCACTACG 62.814 72.222 0.00 0.00 0.00 3.51
360 361 3.454573 CGGGCTGGGCACTACGTA 61.455 66.667 0.00 0.00 0.00 3.57
361 362 2.499685 GGGCTGGGCACTACGTAG 59.500 66.667 20.97 20.97 0.00 3.51
362 363 2.202892 GGCTGGGCACTACGTAGC 60.203 66.667 22.40 10.36 0.00 3.58
367 368 4.137872 GGCACTACGTAGCCCGCA 62.138 66.667 22.40 0.00 45.18 5.69
368 369 2.582498 GCACTACGTAGCCCGCAG 60.582 66.667 22.40 6.90 41.42 5.18
403 404 4.530857 GCCACCGGTCCGATGGAG 62.531 72.222 30.09 2.75 35.33 3.86
404 405 3.849951 CCACCGGTCCGATGGAGG 61.850 72.222 21.35 3.26 35.33 4.30
405 406 2.758327 CACCGGTCCGATGGAGGA 60.758 66.667 14.39 0.00 38.11 3.71
406 407 2.442272 ACCGGTCCGATGGAGGAG 60.442 66.667 14.39 0.00 41.68 3.69
407 408 2.123854 CCGGTCCGATGGAGGAGA 60.124 66.667 14.39 0.00 41.68 3.71
408 409 2.491022 CCGGTCCGATGGAGGAGAC 61.491 68.421 14.39 0.00 41.68 3.36
409 410 2.835705 CGGTCCGATGGAGGAGACG 61.836 68.421 4.91 0.00 41.68 4.18
410 411 1.453379 GGTCCGATGGAGGAGACGA 60.453 63.158 0.00 0.00 41.68 4.20
411 412 1.448922 GGTCCGATGGAGGAGACGAG 61.449 65.000 0.00 0.00 41.68 4.18
412 413 1.824329 TCCGATGGAGGAGACGAGC 60.824 63.158 0.00 0.00 34.92 5.03
413 414 1.826054 CCGATGGAGGAGACGAGCT 60.826 63.158 0.00 0.00 0.00 4.09
414 415 1.388065 CCGATGGAGGAGACGAGCTT 61.388 60.000 0.00 0.00 0.00 3.74
415 416 0.030101 CGATGGAGGAGACGAGCTTC 59.970 60.000 0.00 0.00 0.00 3.86
416 417 0.030101 GATGGAGGAGACGAGCTTCG 59.970 60.000 0.00 0.00 46.93 3.79
417 418 1.388065 ATGGAGGAGACGAGCTTCGG 61.388 60.000 9.75 0.00 45.59 4.30
418 419 1.749638 GGAGGAGACGAGCTTCGGA 60.750 63.158 9.75 0.00 45.59 4.55
419 420 1.430228 GAGGAGACGAGCTTCGGAC 59.570 63.158 9.75 4.49 45.59 4.79
420 421 1.995646 GAGGAGACGAGCTTCGGACC 61.996 65.000 9.75 9.05 45.59 4.46
421 422 2.100603 GAGACGAGCTTCGGACCG 59.899 66.667 7.84 7.84 45.59 4.79
422 423 4.117661 AGACGAGCTTCGGACCGC 62.118 66.667 9.66 0.00 45.59 5.68
436 437 2.816520 CCGCCGGGTTTAAGGACG 60.817 66.667 2.18 0.00 0.00 4.79
437 438 2.047939 CGCCGGGTTTAAGGACGT 60.048 61.111 2.18 0.00 0.00 4.34
438 439 1.668793 CGCCGGGTTTAAGGACGTT 60.669 57.895 2.18 0.00 0.00 3.99
439 440 1.229975 CGCCGGGTTTAAGGACGTTT 61.230 55.000 2.18 0.00 0.00 3.60
440 441 0.953727 GCCGGGTTTAAGGACGTTTT 59.046 50.000 2.18 0.00 0.00 2.43
441 442 1.069022 GCCGGGTTTAAGGACGTTTTC 60.069 52.381 2.18 0.00 0.00 2.29
452 453 3.053896 CGTTTTCGGCTGGGACCC 61.054 66.667 2.45 2.45 39.94 4.46
453 454 2.675423 GTTTTCGGCTGGGACCCC 60.675 66.667 8.45 2.69 0.00 4.95
454 455 2.856988 TTTTCGGCTGGGACCCCT 60.857 61.111 8.45 0.00 36.94 4.79
455 456 2.466186 TTTTCGGCTGGGACCCCTT 61.466 57.895 8.45 0.00 36.94 3.95
456 457 2.420466 TTTTCGGCTGGGACCCCTTC 62.420 60.000 8.45 0.00 36.94 3.46
459 460 4.097361 GGCTGGGACCCCTTCGTC 62.097 72.222 8.45 0.00 36.94 4.20
460 461 3.319198 GCTGGGACCCCTTCGTCA 61.319 66.667 8.45 0.00 36.94 4.35
461 462 2.982130 CTGGGACCCCTTCGTCAG 59.018 66.667 8.45 0.00 36.94 3.51
462 463 1.913762 CTGGGACCCCTTCGTCAGT 60.914 63.158 8.45 0.00 36.94 3.41
463 464 1.889530 CTGGGACCCCTTCGTCAGTC 61.890 65.000 8.45 0.00 36.94 3.51
464 465 2.657066 GGGACCCCTTCGTCAGTCC 61.657 68.421 0.00 0.00 46.65 3.85
465 466 2.572284 GACCCCTTCGTCAGTCCG 59.428 66.667 0.00 0.00 32.74 4.79
466 467 1.975407 GACCCCTTCGTCAGTCCGA 60.975 63.158 0.00 0.00 32.74 4.55
467 468 2.210341 GACCCCTTCGTCAGTCCGAC 62.210 65.000 0.00 0.00 41.62 4.79
474 475 4.736896 GTCAGTCCGACGTGGCCC 62.737 72.222 0.00 0.00 37.80 5.80
493 494 2.993999 CGTTTAAGACGTTCGTCTCG 57.006 50.000 24.43 19.50 46.49 4.04
494 495 1.640915 CGTTTAAGACGTTCGTCTCGG 59.359 52.381 24.43 10.92 46.49 4.63
495 496 2.654987 GTTTAAGACGTTCGTCTCGGT 58.345 47.619 24.43 13.90 43.79 4.69
496 497 2.601481 TTAAGACGTTCGTCTCGGTC 57.399 50.000 24.43 0.42 43.79 4.79
497 498 0.439985 TAAGACGTTCGTCTCGGTCG 59.560 55.000 24.43 0.00 43.79 4.79
498 499 2.180131 AAGACGTTCGTCTCGGTCGG 62.180 60.000 24.43 0.00 43.79 4.79
499 500 2.666190 ACGTTCGTCTCGGTCGGA 60.666 61.111 0.00 0.00 0.00 4.55
500 501 2.175184 GACGTTCGTCTCGGTCGGAA 62.175 60.000 16.50 0.00 32.82 4.30
501 502 1.081906 CGTTCGTCTCGGTCGGAAA 60.082 57.895 0.00 0.00 0.00 3.13
502 503 0.661187 CGTTCGTCTCGGTCGGAAAA 60.661 55.000 0.00 0.00 0.00 2.29
503 504 1.706443 GTTCGTCTCGGTCGGAAAAT 58.294 50.000 0.00 0.00 0.00 1.82
504 505 1.652619 GTTCGTCTCGGTCGGAAAATC 59.347 52.381 0.00 0.00 0.00 2.17
505 506 0.179181 TCGTCTCGGTCGGAAAATCG 60.179 55.000 0.00 0.00 0.00 3.34
506 507 0.455633 CGTCTCGGTCGGAAAATCGT 60.456 55.000 0.00 0.00 0.00 3.73
507 508 0.989890 GTCTCGGTCGGAAAATCGTG 59.010 55.000 0.00 0.00 0.00 4.35
508 509 0.883153 TCTCGGTCGGAAAATCGTGA 59.117 50.000 0.00 0.00 0.00 4.35
509 510 0.989890 CTCGGTCGGAAAATCGTGAC 59.010 55.000 0.00 0.00 0.00 3.67
510 511 0.388907 TCGGTCGGAAAATCGTGACC 60.389 55.000 9.23 9.23 45.87 4.02
511 512 2.075761 GGTCGGAAAATCGTGACCG 58.924 57.895 0.00 0.00 41.26 4.79
512 513 1.356527 GGTCGGAAAATCGTGACCGG 61.357 60.000 0.00 0.00 44.57 5.28
513 514 1.079681 TCGGAAAATCGTGACCGGG 60.080 57.895 6.32 0.00 44.57 5.73
514 515 2.746803 CGGAAAATCGTGACCGGGC 61.747 63.158 6.32 1.57 41.41 6.13
515 516 2.746803 GGAAAATCGTGACCGGGCG 61.747 63.158 6.32 7.78 33.95 6.13
516 517 2.744709 AAAATCGTGACCGGGCGG 60.745 61.111 6.32 0.00 42.03 6.13
535 536 4.128388 CCGCCCGGGCATTTGAAC 62.128 66.667 42.78 13.50 42.06 3.18
536 537 3.369400 CGCCCGGGCATTTGAACA 61.369 61.111 42.78 0.00 42.06 3.18
537 538 2.573340 GCCCGGGCATTTGAACAG 59.427 61.111 40.73 0.15 41.49 3.16
538 539 3.005540 GCCCGGGCATTTGAACAGG 62.006 63.158 40.73 0.00 41.49 4.00
539 540 2.350458 CCCGGGCATTTGAACAGGG 61.350 63.158 8.08 0.00 0.00 4.45
540 541 1.606313 CCGGGCATTTGAACAGGGT 60.606 57.895 0.00 0.00 0.00 4.34
541 542 1.184970 CCGGGCATTTGAACAGGGTT 61.185 55.000 0.00 0.00 0.00 4.11
542 543 0.678950 CGGGCATTTGAACAGGGTTT 59.321 50.000 0.00 0.00 0.00 3.27
543 544 1.605202 CGGGCATTTGAACAGGGTTTG 60.605 52.381 0.00 0.00 0.00 2.93
544 545 1.691434 GGGCATTTGAACAGGGTTTGA 59.309 47.619 0.00 0.00 0.00 2.69
545 546 2.103941 GGGCATTTGAACAGGGTTTGAA 59.896 45.455 0.00 0.00 0.00 2.69
546 547 3.392882 GGCATTTGAACAGGGTTTGAAG 58.607 45.455 0.00 0.00 0.00 3.02
547 548 2.802247 GCATTTGAACAGGGTTTGAAGC 59.198 45.455 0.00 0.00 0.00 3.86
548 549 2.861462 TTTGAACAGGGTTTGAAGCG 57.139 45.000 0.00 0.00 0.00 4.68
549 550 0.383949 TTGAACAGGGTTTGAAGCGC 59.616 50.000 0.00 0.00 0.00 5.92
550 551 1.285950 GAACAGGGTTTGAAGCGCC 59.714 57.895 2.29 0.00 0.00 6.53
551 552 2.142357 GAACAGGGTTTGAAGCGCCC 62.142 60.000 2.29 0.00 42.64 6.13
552 553 3.737172 CAGGGTTTGAAGCGCCCG 61.737 66.667 2.29 0.00 46.69 6.13
564 565 3.849951 CGCCCGGCTGTAGATGGT 61.850 66.667 8.05 0.00 0.00 3.55
565 566 2.109181 GCCCGGCTGTAGATGGTC 59.891 66.667 0.71 0.00 0.00 4.02
582 583 9.010029 GTAGATGGTCTTAGGTTTTCAAAATGA 57.990 33.333 0.00 0.00 0.00 2.57
585 586 7.049799 TGGTCTTAGGTTTTCAAAATGAAGG 57.950 36.000 0.00 0.00 37.70 3.46
650 651 4.695455 TGAATGTCTAAGCCGAAAAAGGAG 59.305 41.667 0.00 0.00 0.00 3.69
737 744 8.644374 AAGGCAGTGATTAATTTAGTGGTAAA 57.356 30.769 0.00 0.00 32.60 2.01
804 811 1.165907 CGGTTGCTTTCTCCAGTGCA 61.166 55.000 0.00 0.00 0.00 4.57
855 878 1.739929 CGCGTAGGTTGGCATCACA 60.740 57.895 0.00 0.00 0.00 3.58
865 890 1.466856 TGGCATCACAATCAAGCTCC 58.533 50.000 0.00 0.00 0.00 4.70
871 896 5.651139 GGCATCACAATCAAGCTCCATATAT 59.349 40.000 0.00 0.00 0.00 0.86
980 1036 3.462021 CCAGTAAGCTGCAAGTAGATCC 58.538 50.000 1.02 0.00 41.26 3.36
1050 1109 4.356979 GTCGATCAGGACCTCCCA 57.643 61.111 0.00 0.00 37.41 4.37
1204 1282 4.114073 TGGTACGTTACACACAAGAACAG 58.886 43.478 0.00 0.00 0.00 3.16
1213 1294 1.593006 ACACAAGAACAGCTTCGAACG 59.407 47.619 0.00 0.00 33.60 3.95
1218 1299 3.093717 AGAACAGCTTCGAACGAGAAA 57.906 42.857 0.00 0.00 0.00 2.52
1222 1303 3.390135 ACAGCTTCGAACGAGAAAATCA 58.610 40.909 0.00 0.00 0.00 2.57
1225 1306 4.091945 CAGCTTCGAACGAGAAAATCATCA 59.908 41.667 0.00 0.00 0.00 3.07
1237 1318 4.447054 AGAAAATCATCACAGATCGATCGC 59.553 41.667 19.33 0.00 0.00 4.58
1274 1393 2.730069 CAGCGAGATGACAGAGATGTC 58.270 52.381 1.44 1.44 39.15 3.06
1838 2005 0.767375 AGCCAAGAAGGAAGCAGACA 59.233 50.000 0.00 0.00 41.22 3.41
2161 2376 5.182190 GCTCTACTATTGATCGATGGACTGA 59.818 44.000 12.96 6.83 0.00 3.41
2314 2562 5.577835 TGTTTAACATGACAGTTGCAACTC 58.422 37.500 28.97 19.16 37.08 3.01
2337 2585 9.236006 ACTCAGATTGCAATGAATTAACTTAGT 57.764 29.630 18.59 9.52 0.00 2.24
2355 2603 7.806149 ACTTAGTTAACTGTTTTGTGTTTGC 57.194 32.000 18.56 0.00 0.00 3.68
2356 2604 6.809689 ACTTAGTTAACTGTTTTGTGTTTGCC 59.190 34.615 18.56 0.00 0.00 4.52
2357 2605 5.140747 AGTTAACTGTTTTGTGTTTGCCA 57.859 34.783 7.48 0.00 0.00 4.92
2358 2606 5.542779 AGTTAACTGTTTTGTGTTTGCCAA 58.457 33.333 7.48 0.00 0.00 4.52
2359 2607 5.637387 AGTTAACTGTTTTGTGTTTGCCAAG 59.363 36.000 7.48 0.00 0.00 3.61
2360 2608 3.676291 ACTGTTTTGTGTTTGCCAAGT 57.324 38.095 0.00 0.00 0.00 3.16
2361 2609 3.324993 ACTGTTTTGTGTTTGCCAAGTG 58.675 40.909 0.00 0.00 0.00 3.16
2362 2610 3.006323 ACTGTTTTGTGTTTGCCAAGTGA 59.994 39.130 0.00 0.00 0.00 3.41
2363 2611 4.183101 CTGTTTTGTGTTTGCCAAGTGAT 58.817 39.130 0.00 0.00 0.00 3.06
2364 2612 5.105554 ACTGTTTTGTGTTTGCCAAGTGATA 60.106 36.000 0.00 0.00 0.00 2.15
2365 2613 5.911752 TGTTTTGTGTTTGCCAAGTGATAT 58.088 33.333 0.00 0.00 0.00 1.63
2366 2614 5.752472 TGTTTTGTGTTTGCCAAGTGATATG 59.248 36.000 0.00 0.00 0.00 1.78
2367 2615 4.517952 TTGTGTTTGCCAAGTGATATGG 57.482 40.909 0.00 0.00 41.08 2.74
2368 2616 3.495331 TGTGTTTGCCAAGTGATATGGT 58.505 40.909 0.00 0.00 40.23 3.55
2369 2617 3.255395 TGTGTTTGCCAAGTGATATGGTG 59.745 43.478 0.00 0.00 40.23 4.17
2370 2618 3.505680 GTGTTTGCCAAGTGATATGGTGA 59.494 43.478 0.00 0.00 40.23 4.02
2371 2619 4.158394 GTGTTTGCCAAGTGATATGGTGAT 59.842 41.667 0.00 0.00 40.23 3.06
2372 2620 4.771577 TGTTTGCCAAGTGATATGGTGATT 59.228 37.500 0.00 0.00 40.23 2.57
2373 2621 4.987408 TTGCCAAGTGATATGGTGATTG 57.013 40.909 0.00 0.00 40.23 2.67
2391 2658 5.523188 GTGATTGCCAAACTTCACAAATTGA 59.477 36.000 0.00 0.00 38.63 2.57
2415 2682 8.717821 TGAAAATGACTGGTATCTTCTTTAACG 58.282 33.333 0.00 0.00 0.00 3.18
2416 2683 7.611213 AAATGACTGGTATCTTCTTTAACGG 57.389 36.000 0.00 0.00 0.00 4.44
2418 2685 3.518590 ACTGGTATCTTCTTTAACGGCG 58.481 45.455 4.80 4.80 0.00 6.46
2419 2686 3.194116 ACTGGTATCTTCTTTAACGGCGA 59.806 43.478 16.62 0.00 0.00 5.54
2430 2743 0.817013 TAACGGCGATTTACGGAGGT 59.183 50.000 16.62 0.00 42.83 3.85
2431 2744 0.037046 AACGGCGATTTACGGAGGTT 60.037 50.000 16.62 0.00 42.83 3.50
2432 2745 0.037046 ACGGCGATTTACGGAGGTTT 60.037 50.000 16.62 0.00 42.83 3.27
2433 2746 1.204467 ACGGCGATTTACGGAGGTTTA 59.796 47.619 16.62 0.00 42.83 2.01
2435 2748 2.029606 CGGCGATTTACGGAGGTTTAAC 59.970 50.000 0.00 0.00 42.83 2.01
2436 2749 2.029606 GGCGATTTACGGAGGTTTAACG 59.970 50.000 0.00 0.00 42.83 3.18
2437 2750 2.029606 GCGATTTACGGAGGTTTAACGG 59.970 50.000 0.00 0.00 42.83 4.44
2438 2751 2.604462 CGATTTACGGAGGTTTAACGGG 59.396 50.000 0.00 0.00 38.46 5.28
2439 2752 1.807139 TTTACGGAGGTTTAACGGGC 58.193 50.000 0.00 0.00 0.00 6.13
2440 2753 0.975887 TTACGGAGGTTTAACGGGCT 59.024 50.000 0.00 0.00 0.00 5.19
2441 2754 0.247185 TACGGAGGTTTAACGGGCTG 59.753 55.000 0.00 0.00 0.00 4.85
2442 2755 2.396157 CGGAGGTTTAACGGGCTGC 61.396 63.158 0.00 0.00 0.00 5.25
2443 2756 1.002502 GGAGGTTTAACGGGCTGCT 60.003 57.895 0.00 0.00 0.00 4.24
2444 2757 0.608308 GGAGGTTTAACGGGCTGCTT 60.608 55.000 0.00 0.00 0.00 3.91
2446 2759 2.007608 GAGGTTTAACGGGCTGCTTAG 58.992 52.381 0.00 0.00 0.00 2.18
2447 2760 0.450583 GGTTTAACGGGCTGCTTAGC 59.549 55.000 0.00 0.00 0.00 3.09
2449 2762 1.743394 GTTTAACGGGCTGCTTAGCAT 59.257 47.619 7.58 0.00 38.13 3.79
2451 2764 1.378531 TAACGGGCTGCTTAGCATTG 58.621 50.000 7.58 0.00 38.13 2.82
2454 2767 1.027357 CGGGCTGCTTAGCATTGATT 58.973 50.000 7.58 0.00 38.13 2.57
2455 2768 1.268896 CGGGCTGCTTAGCATTGATTG 60.269 52.381 7.58 0.00 38.13 2.67
2456 2769 1.068127 GGGCTGCTTAGCATTGATTGG 59.932 52.381 7.58 0.00 38.13 3.16
2457 2770 1.537562 GGCTGCTTAGCATTGATTGGC 60.538 52.381 7.58 5.54 38.13 4.52
2459 2772 2.798499 GCTGCTTAGCATTGATTGGCTG 60.798 50.000 7.58 0.00 41.25 4.85
2460 2773 2.686405 CTGCTTAGCATTGATTGGCTGA 59.314 45.455 7.58 0.00 41.25 4.26
2461 2774 2.686405 TGCTTAGCATTGATTGGCTGAG 59.314 45.455 1.39 0.00 44.07 3.35
2464 2777 4.037684 GCTTAGCATTGATTGGCTGAGATT 59.962 41.667 9.25 0.00 44.00 2.40
2466 2779 4.386867 AGCATTGATTGGCTGAGATTTG 57.613 40.909 0.00 0.00 39.30 2.32
2467 2780 3.132289 AGCATTGATTGGCTGAGATTTGG 59.868 43.478 0.00 0.00 39.30 3.28
2468 2781 3.454375 CATTGATTGGCTGAGATTTGGC 58.546 45.455 0.00 0.00 0.00 4.52
2469 2782 2.519771 TGATTGGCTGAGATTTGGCT 57.480 45.000 0.00 0.00 0.00 4.75
2470 2783 2.811410 TGATTGGCTGAGATTTGGCTT 58.189 42.857 0.00 0.00 0.00 4.35
2471 2784 3.966979 TGATTGGCTGAGATTTGGCTTA 58.033 40.909 0.00 0.00 0.00 3.09
2473 2786 4.957954 TGATTGGCTGAGATTTGGCTTAAT 59.042 37.500 0.00 0.00 0.00 1.40
2474 2787 4.724074 TTGGCTGAGATTTGGCTTAATG 57.276 40.909 0.00 0.00 0.00 1.90
2476 2789 3.949754 TGGCTGAGATTTGGCTTAATGAG 59.050 43.478 0.00 0.00 0.00 2.90
2477 2790 3.317430 GGCTGAGATTTGGCTTAATGAGG 59.683 47.826 0.00 0.00 0.00 3.86
2484 2797 3.847621 GCTTAATGAGGCAGGCCC 58.152 61.111 6.70 0.00 36.58 5.80
2486 2799 1.387295 GCTTAATGAGGCAGGCCCAC 61.387 60.000 6.70 2.42 36.58 4.61
2487 2800 0.753111 CTTAATGAGGCAGGCCCACC 60.753 60.000 6.70 0.00 36.58 4.61
2497 2810 0.758685 CAGGCCCACCCAGTGAAAAA 60.759 55.000 0.00 0.00 35.23 1.94
2498 2811 0.759060 AGGCCCACCCAGTGAAAAAC 60.759 55.000 0.00 0.00 35.23 2.43
2499 2812 1.045911 GGCCCACCCAGTGAAAAACA 61.046 55.000 0.00 0.00 35.23 2.83
2501 2814 1.039856 CCCACCCAGTGAAAAACAGG 58.960 55.000 0.00 0.00 35.23 4.00
2506 2819 2.080654 CCAGTGAAAAACAGGGGGAA 57.919 50.000 0.00 0.00 31.82 3.97
2507 2820 2.393646 CCAGTGAAAAACAGGGGGAAA 58.606 47.619 0.00 0.00 31.82 3.13
2509 2822 3.390967 CCAGTGAAAAACAGGGGGAAATT 59.609 43.478 0.00 0.00 31.82 1.82
2512 2825 5.304357 CAGTGAAAAACAGGGGGAAATTAGT 59.696 40.000 0.00 0.00 0.00 2.24
2513 2826 5.304357 AGTGAAAAACAGGGGGAAATTAGTG 59.696 40.000 0.00 0.00 0.00 2.74
2514 2827 4.591072 TGAAAAACAGGGGGAAATTAGTGG 59.409 41.667 0.00 0.00 0.00 4.00
2515 2828 4.479156 AAAACAGGGGGAAATTAGTGGA 57.521 40.909 0.00 0.00 0.00 4.02
2516 2829 3.739401 AACAGGGGGAAATTAGTGGAG 57.261 47.619 0.00 0.00 0.00 3.86
2518 2831 1.215423 CAGGGGGAAATTAGTGGAGGG 59.785 57.143 0.00 0.00 0.00 4.30
2519 2832 0.106167 GGGGGAAATTAGTGGAGGGC 60.106 60.000 0.00 0.00 0.00 5.19
2520 2833 0.629058 GGGGAAATTAGTGGAGGGCA 59.371 55.000 0.00 0.00 0.00 5.36
2521 2834 1.685180 GGGGAAATTAGTGGAGGGCAC 60.685 57.143 0.00 0.00 0.00 5.01
2522 2835 1.379527 GGAAATTAGTGGAGGGCACG 58.620 55.000 0.00 0.00 0.00 5.34
2523 2836 0.733150 GAAATTAGTGGAGGGCACGC 59.267 55.000 0.00 0.00 0.00 5.34
2524 2837 1.024579 AAATTAGTGGAGGGCACGCG 61.025 55.000 3.53 3.53 0.00 6.01
2525 2838 2.869503 AATTAGTGGAGGGCACGCGG 62.870 60.000 12.47 0.00 0.00 6.46
2535 2848 4.875713 GCACGCGGGGGAATCCAT 62.876 66.667 11.92 0.00 37.22 3.41
2536 2849 2.825982 CACGCGGGGGAATCCATA 59.174 61.111 12.47 0.00 37.22 2.74
2537 2850 1.147376 CACGCGGGGGAATCCATAA 59.853 57.895 12.47 0.00 37.22 1.90
2538 2851 0.464735 CACGCGGGGGAATCCATAAA 60.465 55.000 12.47 0.00 37.22 1.40
2539 2852 0.256464 ACGCGGGGGAATCCATAAAA 59.744 50.000 12.47 0.00 37.22 1.52
2540 2853 0.951558 CGCGGGGGAATCCATAAAAG 59.048 55.000 0.09 0.00 37.22 2.27
2541 2854 1.749286 CGCGGGGGAATCCATAAAAGT 60.749 52.381 0.09 0.00 37.22 2.66
2542 2855 1.954382 GCGGGGGAATCCATAAAAGTC 59.046 52.381 0.09 0.00 37.22 3.01
2543 2856 2.583143 CGGGGGAATCCATAAAAGTCC 58.417 52.381 0.09 0.00 37.22 3.85
2544 2857 2.583143 GGGGGAATCCATAAAAGTCCG 58.417 52.381 0.09 0.00 37.22 4.79
2545 2858 2.092049 GGGGGAATCCATAAAAGTCCGT 60.092 50.000 0.09 0.00 37.22 4.69
2546 2859 3.626475 GGGGGAATCCATAAAAGTCCGTT 60.626 47.826 0.09 0.00 37.22 4.44
2547 2860 3.380320 GGGGAATCCATAAAAGTCCGTTG 59.620 47.826 0.09 0.00 35.00 4.10
2548 2861 4.014406 GGGAATCCATAAAAGTCCGTTGT 58.986 43.478 0.09 0.00 0.00 3.32
2549 2862 4.461431 GGGAATCCATAAAAGTCCGTTGTT 59.539 41.667 0.09 0.00 0.00 2.83
2550 2863 5.047590 GGGAATCCATAAAAGTCCGTTGTTT 60.048 40.000 0.09 0.00 0.00 2.83
2551 2864 6.090783 GGAATCCATAAAAGTCCGTTGTTTC 58.909 40.000 0.00 0.00 0.00 2.78
2552 2865 4.735662 TCCATAAAAGTCCGTTGTTTCG 57.264 40.909 0.00 0.00 0.00 3.46
2553 2866 4.128643 TCCATAAAAGTCCGTTGTTTCGT 58.871 39.130 0.00 0.00 0.00 3.85
2554 2867 4.575645 TCCATAAAAGTCCGTTGTTTCGTT 59.424 37.500 0.00 0.00 0.00 3.85
2555 2868 4.907582 CCATAAAAGTCCGTTGTTTCGTTC 59.092 41.667 0.00 0.00 0.00 3.95
2556 2869 3.409851 AAAAGTCCGTTGTTTCGTTCC 57.590 42.857 0.00 0.00 0.00 3.62
2557 2870 0.932399 AAGTCCGTTGTTTCGTTCCG 59.068 50.000 0.00 0.00 0.00 4.30
2558 2871 0.179103 AGTCCGTTGTTTCGTTCCGT 60.179 50.000 0.00 0.00 0.00 4.69
2559 2872 0.042794 GTCCGTTGTTTCGTTCCGTG 60.043 55.000 0.00 0.00 0.00 4.94
2560 2873 1.368374 CCGTTGTTTCGTTCCGTGC 60.368 57.895 0.00 0.00 0.00 5.34
2561 2874 1.716378 CGTTGTTTCGTTCCGTGCG 60.716 57.895 0.00 0.00 0.00 5.34
2562 2875 1.349282 GTTGTTTCGTTCCGTGCGT 59.651 52.632 0.00 0.00 0.00 5.24
2563 2876 0.922111 GTTGTTTCGTTCCGTGCGTG 60.922 55.000 0.00 0.00 0.00 5.34
2564 2877 1.360194 TTGTTTCGTTCCGTGCGTGT 61.360 50.000 0.00 0.00 0.00 4.49
2565 2878 0.527169 TGTTTCGTTCCGTGCGTGTA 60.527 50.000 0.00 0.00 0.00 2.90
2566 2879 0.160182 GTTTCGTTCCGTGCGTGTAG 59.840 55.000 0.00 0.00 0.00 2.74
2567 2880 0.248990 TTTCGTTCCGTGCGTGTAGT 60.249 50.000 0.00 0.00 0.00 2.73
2568 2881 0.590682 TTCGTTCCGTGCGTGTAGTA 59.409 50.000 0.00 0.00 0.00 1.82
2569 2882 0.804364 TCGTTCCGTGCGTGTAGTAT 59.196 50.000 0.00 0.00 0.00 2.12
2570 2883 1.199789 TCGTTCCGTGCGTGTAGTATT 59.800 47.619 0.00 0.00 0.00 1.89
2571 2884 1.987770 CGTTCCGTGCGTGTAGTATTT 59.012 47.619 0.00 0.00 0.00 1.40
2572 2885 2.409378 CGTTCCGTGCGTGTAGTATTTT 59.591 45.455 0.00 0.00 0.00 1.82
2573 2886 3.480825 CGTTCCGTGCGTGTAGTATTTTC 60.481 47.826 0.00 0.00 0.00 2.29
2574 2887 2.609350 TCCGTGCGTGTAGTATTTTCC 58.391 47.619 0.00 0.00 0.00 3.13
2575 2888 1.662122 CCGTGCGTGTAGTATTTTCCC 59.338 52.381 0.00 0.00 0.00 3.97
2576 2889 2.613691 CGTGCGTGTAGTATTTTCCCT 58.386 47.619 0.00 0.00 0.00 4.20
2577 2890 2.997986 CGTGCGTGTAGTATTTTCCCTT 59.002 45.455 0.00 0.00 0.00 3.95
2578 2891 3.061697 CGTGCGTGTAGTATTTTCCCTTC 59.938 47.826 0.00 0.00 0.00 3.46
2579 2892 4.251268 GTGCGTGTAGTATTTTCCCTTCT 58.749 43.478 0.00 0.00 0.00 2.85
2580 2893 4.694037 GTGCGTGTAGTATTTTCCCTTCTT 59.306 41.667 0.00 0.00 0.00 2.52
2581 2894 5.180680 GTGCGTGTAGTATTTTCCCTTCTTT 59.819 40.000 0.00 0.00 0.00 2.52
2582 2895 6.369615 GTGCGTGTAGTATTTTCCCTTCTTTA 59.630 38.462 0.00 0.00 0.00 1.85
2583 2896 6.935771 TGCGTGTAGTATTTTCCCTTCTTTAA 59.064 34.615 0.00 0.00 0.00 1.52
2584 2897 7.608761 TGCGTGTAGTATTTTCCCTTCTTTAAT 59.391 33.333 0.00 0.00 0.00 1.40
2585 2898 8.456471 GCGTGTAGTATTTTCCCTTCTTTAATT 58.544 33.333 0.00 0.00 0.00 1.40
2590 2903 8.834004 AGTATTTTCCCTTCTTTAATTACCCC 57.166 34.615 0.00 0.00 0.00 4.95
2610 2923 2.417379 CCATATACTCCCCGAGCGAATG 60.417 54.545 0.00 0.00 32.04 2.67
2643 2956 1.128692 GATGAAAACCCTGAACGCGAG 59.871 52.381 15.93 0.00 0.00 5.03
2671 2984 4.824479 GGTCATTTGATGGACCCAAAAT 57.176 40.909 0.00 0.00 46.29 1.82
2692 3005 1.754226 GAAACCCAAGCAGTCCAAACA 59.246 47.619 0.00 0.00 0.00 2.83
2724 3039 6.875948 AGTAAAAATGAAAAATGGTTGGCC 57.124 33.333 0.00 0.00 0.00 5.36
2804 3120 6.607735 GCACATGCTAAAATATTGCCAAAT 57.392 33.333 0.00 0.00 38.21 2.32
2805 3121 7.712264 GCACATGCTAAAATATTGCCAAATA 57.288 32.000 0.00 0.00 38.21 1.40
3035 3579 8.592155 GTTTTCCAAAACATAAAAGTCAGACAC 58.408 33.333 9.58 0.00 45.72 3.67
3058 3602 6.016943 CACAGGAAAATTGCCATGACAAAAAT 60.017 34.615 0.00 0.00 32.27 1.82
3059 3603 7.172875 CACAGGAAAATTGCCATGACAAAAATA 59.827 33.333 0.00 0.00 32.27 1.40
3061 3605 8.732531 CAGGAAAATTGCCATGACAAAAATAAT 58.267 29.630 0.00 0.00 32.27 1.28
3062 3606 9.956640 AGGAAAATTGCCATGACAAAAATAATA 57.043 25.926 0.00 0.00 32.27 0.98
3076 3620 8.345724 ACAAAAATAATAAAATTGCCATGCCA 57.654 26.923 0.00 0.00 0.00 4.92
3094 3638 6.373774 CCATGCCACTAAAAATAAAATTGCCA 59.626 34.615 0.00 0.00 0.00 4.92
3095 3639 7.067251 CCATGCCACTAAAAATAAAATTGCCAT 59.933 33.333 0.00 0.00 0.00 4.40
3096 3640 7.375106 TGCCACTAAAAATAAAATTGCCATG 57.625 32.000 0.00 0.00 0.00 3.66
3097 3641 6.128063 TGCCACTAAAAATAAAATTGCCATGC 60.128 34.615 0.00 0.00 0.00 4.06
3098 3642 6.476896 CCACTAAAAATAAAATTGCCATGCG 58.523 36.000 0.00 0.00 0.00 4.73
3099 3643 5.958949 CACTAAAAATAAAATTGCCATGCGC 59.041 36.000 0.00 0.00 38.31 6.09
3107 3651 3.374332 TGCCATGCGCATTTCCAA 58.626 50.000 22.81 1.72 44.64 3.53
3108 3652 1.670015 TGCCATGCGCATTTCCAAA 59.330 47.368 22.81 0.13 44.64 3.28
3109 3653 0.249676 TGCCATGCGCATTTCCAAAT 59.750 45.000 22.81 0.00 44.64 2.32
3110 3654 1.338864 TGCCATGCGCATTTCCAAATT 60.339 42.857 22.81 0.00 44.64 1.82
3111 3655 1.738908 GCCATGCGCATTTCCAAATTT 59.261 42.857 22.81 0.00 37.47 1.82
3112 3656 2.476519 GCCATGCGCATTTCCAAATTTG 60.477 45.455 22.81 11.40 37.47 2.32
3113 3657 2.476519 CCATGCGCATTTCCAAATTTGC 60.477 45.455 22.81 0.00 0.00 3.68
3114 3658 1.155042 TGCGCATTTCCAAATTTGCC 58.845 45.000 5.66 0.00 0.00 4.52
3115 3659 1.155042 GCGCATTTCCAAATTTGCCA 58.845 45.000 12.92 0.00 0.00 4.92
3116 3660 1.738908 GCGCATTTCCAAATTTGCCAT 59.261 42.857 12.92 1.32 0.00 4.40
3117 3661 2.476519 GCGCATTTCCAAATTTGCCATG 60.477 45.455 12.92 13.54 0.00 3.66
3118 3662 3.001414 CGCATTTCCAAATTTGCCATGA 58.999 40.909 12.92 1.81 0.00 3.07
3119 3663 3.436015 CGCATTTCCAAATTTGCCATGAA 59.564 39.130 12.92 7.93 0.00 2.57
3120 3664 4.095185 CGCATTTCCAAATTTGCCATGAAT 59.905 37.500 12.92 5.12 0.00 2.57
3121 3665 5.293814 CGCATTTCCAAATTTGCCATGAATA 59.706 36.000 12.92 3.41 0.00 1.75
3122 3666 6.183360 CGCATTTCCAAATTTGCCATGAATAA 60.183 34.615 12.92 0.00 0.00 1.40
3123 3667 7.190871 GCATTTCCAAATTTGCCATGAATAAG 58.809 34.615 12.92 5.43 0.00 1.73
3124 3668 7.148205 GCATTTCCAAATTTGCCATGAATAAGT 60.148 33.333 12.92 0.00 0.00 2.24
3125 3669 7.670009 TTTCCAAATTTGCCATGAATAAGTG 57.330 32.000 12.92 0.00 0.00 3.16
3126 3670 6.602410 TCCAAATTTGCCATGAATAAGTGA 57.398 33.333 12.92 0.00 0.00 3.41
3127 3671 7.185318 TCCAAATTTGCCATGAATAAGTGAT 57.815 32.000 12.92 0.00 0.00 3.06
3128 3672 7.622713 TCCAAATTTGCCATGAATAAGTGATT 58.377 30.769 12.92 0.00 0.00 2.57
3129 3673 8.756927 TCCAAATTTGCCATGAATAAGTGATTA 58.243 29.630 12.92 0.00 0.00 1.75
3130 3674 9.381033 CCAAATTTGCCATGAATAAGTGATTAA 57.619 29.630 12.92 0.00 0.00 1.40
3136 3680 9.598517 TTGCCATGAATAAGTGATTAAATTTCC 57.401 29.630 0.00 0.00 0.00 3.13
3137 3681 7.920151 TGCCATGAATAAGTGATTAAATTTCCG 59.080 33.333 0.00 0.00 0.00 4.30
3138 3682 8.134895 GCCATGAATAAGTGATTAAATTTCCGA 58.865 33.333 0.00 0.00 0.00 4.55
3142 3686 9.567848 TGAATAAGTGATTAAATTTCCGAAAGC 57.432 29.630 0.00 0.00 0.00 3.51
3143 3687 9.788960 GAATAAGTGATTAAATTTCCGAAAGCT 57.211 29.630 0.00 0.00 0.00 3.74
3145 3689 7.873739 AAGTGATTAAATTTCCGAAAGCTTG 57.126 32.000 0.00 0.00 0.00 4.01
3146 3690 5.863935 AGTGATTAAATTTCCGAAAGCTTGC 59.136 36.000 0.00 0.00 0.00 4.01
3147 3691 5.062183 GTGATTAAATTTCCGAAAGCTTGCC 59.938 40.000 0.00 0.00 0.00 4.52
3148 3692 4.592485 TTAAATTTCCGAAAGCTTGCCA 57.408 36.364 0.00 0.00 0.00 4.92
3149 3693 3.683365 AAATTTCCGAAAGCTTGCCAT 57.317 38.095 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.952497 ACACTGGCAACGCAGATCTG 60.952 55.000 18.84 18.84 42.51 2.90
22 23 0.671781 GACACTGGCAACGCAGATCT 60.672 55.000 0.00 0.00 42.51 2.75
23 24 0.671781 AGACACTGGCAACGCAGATC 60.672 55.000 0.00 0.00 42.51 2.75
24 25 0.671781 GAGACACTGGCAACGCAGAT 60.672 55.000 0.00 0.00 42.51 2.90
25 26 1.300931 GAGACACTGGCAACGCAGA 60.301 57.895 0.00 0.00 42.51 4.26
26 27 2.320587 GGAGACACTGGCAACGCAG 61.321 63.158 0.00 0.00 42.51 5.18
27 28 2.280797 GGAGACACTGGCAACGCA 60.281 61.111 0.00 0.00 42.51 5.24
28 29 3.050275 GGGAGACACTGGCAACGC 61.050 66.667 0.00 0.00 42.51 4.84
29 30 1.961277 GTGGGAGACACTGGCAACG 60.961 63.158 0.00 0.00 46.72 4.10
30 31 4.065110 GTGGGAGACACTGGCAAC 57.935 61.111 0.00 0.00 46.72 4.17
38 39 0.325671 GGAGGAGGATGTGGGAGACA 60.326 60.000 0.00 0.00 39.53 3.41
39 40 0.031616 AGGAGGAGGATGTGGGAGAC 60.032 60.000 0.00 0.00 0.00 3.36
40 41 0.263172 GAGGAGGAGGATGTGGGAGA 59.737 60.000 0.00 0.00 0.00 3.71
41 42 0.762461 GGAGGAGGAGGATGTGGGAG 60.762 65.000 0.00 0.00 0.00 4.30
42 43 1.231751 AGGAGGAGGAGGATGTGGGA 61.232 60.000 0.00 0.00 0.00 4.37
43 44 0.762461 GAGGAGGAGGAGGATGTGGG 60.762 65.000 0.00 0.00 0.00 4.61
44 45 0.762461 GGAGGAGGAGGAGGATGTGG 60.762 65.000 0.00 0.00 0.00 4.17
45 46 0.264359 AGGAGGAGGAGGAGGATGTG 59.736 60.000 0.00 0.00 0.00 3.21
46 47 1.022903 AAGGAGGAGGAGGAGGATGT 58.977 55.000 0.00 0.00 0.00 3.06
47 48 1.220236 AGAAGGAGGAGGAGGAGGATG 59.780 57.143 0.00 0.00 0.00 3.51
48 49 1.503347 GAGAAGGAGGAGGAGGAGGAT 59.497 57.143 0.00 0.00 0.00 3.24
49 50 0.930726 GAGAAGGAGGAGGAGGAGGA 59.069 60.000 0.00 0.00 0.00 3.71
50 51 0.105709 GGAGAAGGAGGAGGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
51 52 0.633921 TGGAGAAGGAGGAGGAGGAG 59.366 60.000 0.00 0.00 0.00 3.69
52 53 0.336737 GTGGAGAAGGAGGAGGAGGA 59.663 60.000 0.00 0.00 0.00 3.71
53 54 0.689412 GGTGGAGAAGGAGGAGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
54 55 0.041833 TGGTGGAGAAGGAGGAGGAG 59.958 60.000 0.00 0.00 0.00 3.69
55 56 0.491823 TTGGTGGAGAAGGAGGAGGA 59.508 55.000 0.00 0.00 0.00 3.71
56 57 0.615850 GTTGGTGGAGAAGGAGGAGG 59.384 60.000 0.00 0.00 0.00 4.30
57 58 1.002544 GTGTTGGTGGAGAAGGAGGAG 59.997 57.143 0.00 0.00 0.00 3.69
58 59 1.056660 GTGTTGGTGGAGAAGGAGGA 58.943 55.000 0.00 0.00 0.00 3.71
59 60 0.036875 GGTGTTGGTGGAGAAGGAGG 59.963 60.000 0.00 0.00 0.00 4.30
60 61 1.002544 GAGGTGTTGGTGGAGAAGGAG 59.997 57.143 0.00 0.00 0.00 3.69
61 62 1.056660 GAGGTGTTGGTGGAGAAGGA 58.943 55.000 0.00 0.00 0.00 3.36
62 63 0.036875 GGAGGTGTTGGTGGAGAAGG 59.963 60.000 0.00 0.00 0.00 3.46
63 64 1.002544 GAGGAGGTGTTGGTGGAGAAG 59.997 57.143 0.00 0.00 0.00 2.85
64 65 1.056660 GAGGAGGTGTTGGTGGAGAA 58.943 55.000 0.00 0.00 0.00 2.87
65 66 0.836400 GGAGGAGGTGTTGGTGGAGA 60.836 60.000 0.00 0.00 0.00 3.71
66 67 0.838122 AGGAGGAGGTGTTGGTGGAG 60.838 60.000 0.00 0.00 0.00 3.86
67 68 0.836400 GAGGAGGAGGTGTTGGTGGA 60.836 60.000 0.00 0.00 0.00 4.02
68 69 1.679898 GAGGAGGAGGTGTTGGTGG 59.320 63.158 0.00 0.00 0.00 4.61
69 70 0.838122 AGGAGGAGGAGGTGTTGGTG 60.838 60.000 0.00 0.00 0.00 4.17
70 71 0.545548 GAGGAGGAGGAGGTGTTGGT 60.546 60.000 0.00 0.00 0.00 3.67
71 72 1.268283 GGAGGAGGAGGAGGTGTTGG 61.268 65.000 0.00 0.00 0.00 3.77
72 73 0.252467 AGGAGGAGGAGGAGGTGTTG 60.252 60.000 0.00 0.00 0.00 3.33
73 74 0.041982 GAGGAGGAGGAGGAGGTGTT 59.958 60.000 0.00 0.00 0.00 3.32
74 75 1.700985 GAGGAGGAGGAGGAGGTGT 59.299 63.158 0.00 0.00 0.00 4.16
75 76 1.075600 GGAGGAGGAGGAGGAGGTG 60.076 68.421 0.00 0.00 0.00 4.00
76 77 1.230819 AGGAGGAGGAGGAGGAGGT 60.231 63.158 0.00 0.00 0.00 3.85
77 78 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
78 79 1.292941 TGGAGGAGGAGGAGGAGGAG 61.293 65.000 0.00 0.00 0.00 3.69
79 80 0.855855 TTGGAGGAGGAGGAGGAGGA 60.856 60.000 0.00 0.00 0.00 3.71
80 81 0.689412 GTTGGAGGAGGAGGAGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
81 82 0.338120 AGTTGGAGGAGGAGGAGGAG 59.662 60.000 0.00 0.00 0.00 3.69
82 83 0.336737 GAGTTGGAGGAGGAGGAGGA 59.663 60.000 0.00 0.00 0.00 3.71
83 84 0.689412 GGAGTTGGAGGAGGAGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
84 85 0.338120 AGGAGTTGGAGGAGGAGGAG 59.662 60.000 0.00 0.00 0.00 3.69
85 86 0.793617 AAGGAGTTGGAGGAGGAGGA 59.206 55.000 0.00 0.00 0.00 3.71
86 87 1.199615 GAAGGAGTTGGAGGAGGAGG 58.800 60.000 0.00 0.00 0.00 4.30
87 88 2.107366 GAGAAGGAGTTGGAGGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
88 89 1.273324 GGAGAAGGAGTTGGAGGAGGA 60.273 57.143 0.00 0.00 0.00 3.71
89 90 1.199615 GGAGAAGGAGTTGGAGGAGG 58.800 60.000 0.00 0.00 0.00 4.30
90 91 0.820871 CGGAGAAGGAGTTGGAGGAG 59.179 60.000 0.00 0.00 0.00 3.69
91 92 0.614979 CCGGAGAAGGAGTTGGAGGA 60.615 60.000 0.00 0.00 0.00 3.71
92 93 0.614979 TCCGGAGAAGGAGTTGGAGG 60.615 60.000 0.00 0.00 34.92 4.30
93 94 1.410882 GATCCGGAGAAGGAGTTGGAG 59.589 57.143 11.34 0.00 44.55 3.86
94 95 1.486211 GATCCGGAGAAGGAGTTGGA 58.514 55.000 11.34 0.00 44.55 3.53
95 96 0.466124 GGATCCGGAGAAGGAGTTGG 59.534 60.000 11.34 0.00 44.55 3.77
96 97 1.137872 CTGGATCCGGAGAAGGAGTTG 59.862 57.143 16.28 0.00 44.55 3.16
97 98 1.273324 ACTGGATCCGGAGAAGGAGTT 60.273 52.381 27.90 0.00 44.55 3.01
98 99 0.336737 ACTGGATCCGGAGAAGGAGT 59.663 55.000 27.90 9.44 44.55 3.85
99 100 0.749649 CACTGGATCCGGAGAAGGAG 59.250 60.000 27.90 8.75 44.55 3.69
100 101 1.330655 GCACTGGATCCGGAGAAGGA 61.331 60.000 27.90 0.00 45.54 3.36
101 102 1.144936 GCACTGGATCCGGAGAAGG 59.855 63.158 27.90 11.29 0.00 3.46
102 103 0.467384 ATGCACTGGATCCGGAGAAG 59.533 55.000 27.90 11.07 0.00 2.85
103 104 0.465705 GATGCACTGGATCCGGAGAA 59.534 55.000 27.90 14.89 0.00 2.87
104 105 1.402896 GGATGCACTGGATCCGGAGA 61.403 60.000 27.90 10.25 30.30 3.71
105 106 1.070445 GGATGCACTGGATCCGGAG 59.930 63.158 27.90 20.37 30.30 4.63
106 107 3.230284 GGATGCACTGGATCCGGA 58.770 61.111 27.90 6.61 30.30 5.14
113 114 0.320247 GCTATCTCCGGATGCACTGG 60.320 60.000 3.57 7.59 45.93 4.00
114 115 0.320247 GGCTATCTCCGGATGCACTG 60.320 60.000 3.57 0.00 33.71 3.66
115 116 1.476007 GGGCTATCTCCGGATGCACT 61.476 60.000 3.57 0.00 33.71 4.40
116 117 1.004440 GGGCTATCTCCGGATGCAC 60.004 63.158 3.57 4.88 33.71 4.57
117 118 2.217038 GGGGCTATCTCCGGATGCA 61.217 63.158 3.57 0.00 33.71 3.96
118 119 2.665603 GGGGCTATCTCCGGATGC 59.334 66.667 3.57 7.49 33.71 3.91
119 120 2.973899 CGGGGCTATCTCCGGATG 59.026 66.667 3.57 0.00 42.32 3.51
120 121 2.997897 GCGGGGCTATCTCCGGAT 60.998 66.667 3.57 0.00 45.75 4.18
149 150 2.701163 GATCCGGGCTAGGTGCGAAG 62.701 65.000 0.00 0.00 44.05 3.79
150 151 2.762459 ATCCGGGCTAGGTGCGAA 60.762 61.111 0.00 0.00 44.05 4.70
151 152 3.224324 GATCCGGGCTAGGTGCGA 61.224 66.667 0.00 0.00 44.05 5.10
152 153 3.227276 AGATCCGGGCTAGGTGCG 61.227 66.667 0.00 0.00 44.05 5.34
153 154 2.423446 CAGATCCGGGCTAGGTGC 59.577 66.667 0.00 0.00 41.94 5.01
154 155 2.093537 GAGCAGATCCGGGCTAGGTG 62.094 65.000 0.00 0.00 41.22 4.00
155 156 1.834822 GAGCAGATCCGGGCTAGGT 60.835 63.158 0.00 0.00 41.22 3.08
156 157 1.402896 TTGAGCAGATCCGGGCTAGG 61.403 60.000 0.00 0.00 41.22 3.02
157 158 0.033228 CTTGAGCAGATCCGGGCTAG 59.967 60.000 0.00 0.00 41.22 3.42
158 159 1.402896 CCTTGAGCAGATCCGGGCTA 61.403 60.000 0.00 0.00 41.22 3.93
159 160 2.739996 CCTTGAGCAGATCCGGGCT 61.740 63.158 0.00 0.90 44.48 5.19
160 161 2.203126 CCTTGAGCAGATCCGGGC 60.203 66.667 0.00 0.00 0.00 6.13
161 162 1.445095 CTCCTTGAGCAGATCCGGG 59.555 63.158 0.00 0.00 0.00 5.73
171 172 2.103934 CGGCTCGAGCTCCTTGAG 59.896 66.667 34.46 10.31 43.05 3.02
172 173 3.452786 CCGGCTCGAGCTCCTTGA 61.453 66.667 34.46 0.00 41.70 3.02
177 178 4.863925 GAGTGCCGGCTCGAGCTC 62.864 72.222 34.46 23.45 41.70 4.09
188 189 0.749454 ATTTCTGATGCCGGAGTGCC 60.749 55.000 5.05 0.00 0.00 5.01
189 190 0.379669 CATTTCTGATGCCGGAGTGC 59.620 55.000 5.05 0.00 0.00 4.40
190 191 1.019673 CCATTTCTGATGCCGGAGTG 58.980 55.000 5.05 0.00 0.00 3.51
191 192 0.620556 ACCATTTCTGATGCCGGAGT 59.379 50.000 5.05 0.00 0.00 3.85
192 193 1.672881 GAACCATTTCTGATGCCGGAG 59.327 52.381 5.05 0.00 0.00 4.63
193 194 1.750193 GAACCATTTCTGATGCCGGA 58.250 50.000 5.05 0.00 0.00 5.14
194 195 0.378257 CGAACCATTTCTGATGCCGG 59.622 55.000 0.00 0.00 0.00 6.13
195 196 0.248215 GCGAACCATTTCTGATGCCG 60.248 55.000 0.00 0.00 0.00 5.69
196 197 1.098050 AGCGAACCATTTCTGATGCC 58.902 50.000 0.00 0.00 0.00 4.40
197 198 2.421424 AGAAGCGAACCATTTCTGATGC 59.579 45.455 0.00 0.00 30.41 3.91
198 199 3.686241 TGAGAAGCGAACCATTTCTGATG 59.314 43.478 0.00 0.00 31.67 3.07
199 200 3.686726 GTGAGAAGCGAACCATTTCTGAT 59.313 43.478 0.00 0.00 31.67 2.90
200 201 3.067106 GTGAGAAGCGAACCATTTCTGA 58.933 45.455 0.00 0.00 31.67 3.27
201 202 2.160417 GGTGAGAAGCGAACCATTTCTG 59.840 50.000 0.00 0.00 33.94 3.02
202 203 2.427506 GGTGAGAAGCGAACCATTTCT 58.572 47.619 0.00 0.00 33.94 2.52
203 204 1.468914 GGGTGAGAAGCGAACCATTTC 59.531 52.381 0.00 0.00 35.56 2.17
204 205 1.534729 GGGTGAGAAGCGAACCATTT 58.465 50.000 0.00 0.00 35.56 2.32
205 206 0.673644 CGGGTGAGAAGCGAACCATT 60.674 55.000 0.00 0.00 35.56 3.16
206 207 1.079127 CGGGTGAGAAGCGAACCAT 60.079 57.895 0.00 0.00 35.56 3.55
207 208 2.342279 CGGGTGAGAAGCGAACCA 59.658 61.111 0.00 0.00 35.56 3.67
208 209 2.434359 CCGGGTGAGAAGCGAACC 60.434 66.667 0.00 0.00 0.00 3.62
209 210 3.119096 GCCGGGTGAGAAGCGAAC 61.119 66.667 2.18 0.00 0.00 3.95
228 229 2.996168 CTAGTAGCCATGCCCCACGC 62.996 65.000 0.00 0.00 38.31 5.34
229 230 1.069765 CTAGTAGCCATGCCCCACG 59.930 63.158 0.00 0.00 0.00 4.94
230 231 1.451936 CCTAGTAGCCATGCCCCAC 59.548 63.158 0.00 0.00 0.00 4.61
231 232 2.452064 GCCTAGTAGCCATGCCCCA 61.452 63.158 0.00 0.00 0.00 4.96
232 233 2.432123 GCCTAGTAGCCATGCCCC 59.568 66.667 0.00 0.00 0.00 5.80
233 234 2.031163 CGCCTAGTAGCCATGCCC 59.969 66.667 0.00 0.00 0.00 5.36
234 235 2.031163 CCGCCTAGTAGCCATGCC 59.969 66.667 0.00 0.00 0.00 4.40
235 236 1.301009 GTCCGCCTAGTAGCCATGC 60.301 63.158 0.00 0.00 0.00 4.06
236 237 1.007271 CGTCCGCCTAGTAGCCATG 60.007 63.158 0.00 0.00 0.00 3.66
237 238 2.201022 CCGTCCGCCTAGTAGCCAT 61.201 63.158 0.00 0.00 0.00 4.40
238 239 2.635787 ATCCGTCCGCCTAGTAGCCA 62.636 60.000 0.00 0.00 0.00 4.75
239 240 1.902432 ATCCGTCCGCCTAGTAGCC 60.902 63.158 0.00 0.00 0.00 3.93
240 241 1.286260 CATCCGTCCGCCTAGTAGC 59.714 63.158 0.00 0.00 0.00 3.58
241 242 0.536687 TCCATCCGTCCGCCTAGTAG 60.537 60.000 0.00 0.00 0.00 2.57
242 243 0.536687 CTCCATCCGTCCGCCTAGTA 60.537 60.000 0.00 0.00 0.00 1.82
243 244 1.828660 CTCCATCCGTCCGCCTAGT 60.829 63.158 0.00 0.00 0.00 2.57
244 245 1.828660 ACTCCATCCGTCCGCCTAG 60.829 63.158 0.00 0.00 0.00 3.02
245 246 2.125326 CACTCCATCCGTCCGCCTA 61.125 63.158 0.00 0.00 0.00 3.93
246 247 3.461773 CACTCCATCCGTCCGCCT 61.462 66.667 0.00 0.00 0.00 5.52
247 248 4.530857 CCACTCCATCCGTCCGCC 62.531 72.222 0.00 0.00 0.00 6.13
248 249 2.515996 TTTCCACTCCATCCGTCCGC 62.516 60.000 0.00 0.00 0.00 5.54
249 250 0.460284 CTTTCCACTCCATCCGTCCG 60.460 60.000 0.00 0.00 0.00 4.79
250 251 0.613777 ACTTTCCACTCCATCCGTCC 59.386 55.000 0.00 0.00 0.00 4.79
251 252 1.676014 CCACTTTCCACTCCATCCGTC 60.676 57.143 0.00 0.00 0.00 4.79
252 253 0.324943 CCACTTTCCACTCCATCCGT 59.675 55.000 0.00 0.00 0.00 4.69
253 254 1.026718 GCCACTTTCCACTCCATCCG 61.027 60.000 0.00 0.00 0.00 4.18
254 255 1.026718 CGCCACTTTCCACTCCATCC 61.027 60.000 0.00 0.00 0.00 3.51
255 256 1.026718 CCGCCACTTTCCACTCCATC 61.027 60.000 0.00 0.00 0.00 3.51
256 257 1.002134 CCGCCACTTTCCACTCCAT 60.002 57.895 0.00 0.00 0.00 3.41
257 258 2.429930 CCGCCACTTTCCACTCCA 59.570 61.111 0.00 0.00 0.00 3.86
258 259 3.056328 GCCGCCACTTTCCACTCC 61.056 66.667 0.00 0.00 0.00 3.85
259 260 3.423154 CGCCGCCACTTTCCACTC 61.423 66.667 0.00 0.00 0.00 3.51
273 274 4.821589 CTCCTCTTGTCCGCCGCC 62.822 72.222 0.00 0.00 0.00 6.13
274 275 4.821589 CCTCCTCTTGTCCGCCGC 62.822 72.222 0.00 0.00 0.00 6.53
275 276 2.167398 TTTCCTCCTCTTGTCCGCCG 62.167 60.000 0.00 0.00 0.00 6.46
276 277 0.036306 TTTTCCTCCTCTTGTCCGCC 59.964 55.000 0.00 0.00 0.00 6.13
277 278 2.115343 ATTTTCCTCCTCTTGTCCGC 57.885 50.000 0.00 0.00 0.00 5.54
278 279 4.130118 CCATATTTTCCTCCTCTTGTCCG 58.870 47.826 0.00 0.00 0.00 4.79
279 280 5.373812 TCCATATTTTCCTCCTCTTGTCC 57.626 43.478 0.00 0.00 0.00 4.02
280 281 6.360618 ACATCCATATTTTCCTCCTCTTGTC 58.639 40.000 0.00 0.00 0.00 3.18
281 282 6.332976 ACATCCATATTTTCCTCCTCTTGT 57.667 37.500 0.00 0.00 0.00 3.16
282 283 7.392673 CCATACATCCATATTTTCCTCCTCTTG 59.607 40.741 0.00 0.00 0.00 3.02
283 284 7.074237 ACCATACATCCATATTTTCCTCCTCTT 59.926 37.037 0.00 0.00 0.00 2.85
284 285 6.564152 ACCATACATCCATATTTTCCTCCTCT 59.436 38.462 0.00 0.00 0.00 3.69
285 286 6.784031 ACCATACATCCATATTTTCCTCCTC 58.216 40.000 0.00 0.00 0.00 3.71
286 287 6.564152 AGACCATACATCCATATTTTCCTCCT 59.436 38.462 0.00 0.00 0.00 3.69
287 288 6.656693 CAGACCATACATCCATATTTTCCTCC 59.343 42.308 0.00 0.00 0.00 4.30
288 289 6.656693 CCAGACCATACATCCATATTTTCCTC 59.343 42.308 0.00 0.00 0.00 3.71
289 290 6.103205 ACCAGACCATACATCCATATTTTCCT 59.897 38.462 0.00 0.00 0.00 3.36
290 291 6.306987 ACCAGACCATACATCCATATTTTCC 58.693 40.000 0.00 0.00 0.00 3.13
291 292 7.823745 AACCAGACCATACATCCATATTTTC 57.176 36.000 0.00 0.00 0.00 2.29
292 293 7.013274 CGAAACCAGACCATACATCCATATTTT 59.987 37.037 0.00 0.00 0.00 1.82
293 294 6.486657 CGAAACCAGACCATACATCCATATTT 59.513 38.462 0.00 0.00 0.00 1.40
294 295 5.997746 CGAAACCAGACCATACATCCATATT 59.002 40.000 0.00 0.00 0.00 1.28
295 296 5.513094 CCGAAACCAGACCATACATCCATAT 60.513 44.000 0.00 0.00 0.00 1.78
296 297 4.202315 CCGAAACCAGACCATACATCCATA 60.202 45.833 0.00 0.00 0.00 2.74
297 298 3.433598 CCGAAACCAGACCATACATCCAT 60.434 47.826 0.00 0.00 0.00 3.41
298 299 2.093181 CCGAAACCAGACCATACATCCA 60.093 50.000 0.00 0.00 0.00 3.41
299 300 2.093128 ACCGAAACCAGACCATACATCC 60.093 50.000 0.00 0.00 0.00 3.51
300 301 2.936498 CACCGAAACCAGACCATACATC 59.064 50.000 0.00 0.00 0.00 3.06
301 302 2.939640 GCACCGAAACCAGACCATACAT 60.940 50.000 0.00 0.00 0.00 2.29
302 303 1.609580 GCACCGAAACCAGACCATACA 60.610 52.381 0.00 0.00 0.00 2.29
303 304 1.084289 GCACCGAAACCAGACCATAC 58.916 55.000 0.00 0.00 0.00 2.39
304 305 0.035820 GGCACCGAAACCAGACCATA 60.036 55.000 0.00 0.00 0.00 2.74
305 306 1.303317 GGCACCGAAACCAGACCAT 60.303 57.895 0.00 0.00 0.00 3.55
306 307 2.112297 GGCACCGAAACCAGACCA 59.888 61.111 0.00 0.00 0.00 4.02
307 308 3.047877 CGGCACCGAAACCAGACC 61.048 66.667 2.01 0.00 42.83 3.85
308 309 3.723348 GCGGCACCGAAACCAGAC 61.723 66.667 14.43 0.00 42.83 3.51
319 320 1.637478 TTTAATTCGACCGGCGGCAC 61.637 55.000 28.71 19.44 41.33 5.01
320 321 0.745128 ATTTAATTCGACCGGCGGCA 60.745 50.000 28.71 7.39 41.33 5.69
321 322 1.193874 CTATTTAATTCGACCGGCGGC 59.806 52.381 28.71 17.97 41.33 6.53
322 323 2.473984 GACTATTTAATTCGACCGGCGG 59.526 50.000 27.06 27.06 41.33 6.13
323 324 2.152489 CGACTATTTAATTCGACCGGCG 59.848 50.000 0.00 6.66 42.69 6.46
324 325 2.473984 CCGACTATTTAATTCGACCGGC 59.526 50.000 0.00 0.00 34.62 6.13
325 326 3.054878 CCCGACTATTTAATTCGACCGG 58.945 50.000 0.00 0.00 34.62 5.28
326 327 2.473984 GCCCGACTATTTAATTCGACCG 59.526 50.000 1.17 0.00 34.62 4.79
327 328 3.493503 CAGCCCGACTATTTAATTCGACC 59.506 47.826 1.17 0.00 34.62 4.79
328 329 3.493503 CCAGCCCGACTATTTAATTCGAC 59.506 47.826 1.17 0.00 34.62 4.20
329 330 3.493699 CCCAGCCCGACTATTTAATTCGA 60.494 47.826 1.17 0.00 34.62 3.71
330 331 2.806244 CCCAGCCCGACTATTTAATTCG 59.194 50.000 0.00 0.00 0.00 3.34
331 332 2.552743 GCCCAGCCCGACTATTTAATTC 59.447 50.000 0.00 0.00 0.00 2.17
332 333 2.092103 TGCCCAGCCCGACTATTTAATT 60.092 45.455 0.00 0.00 0.00 1.40
333 334 1.493022 TGCCCAGCCCGACTATTTAAT 59.507 47.619 0.00 0.00 0.00 1.40
334 335 0.913205 TGCCCAGCCCGACTATTTAA 59.087 50.000 0.00 0.00 0.00 1.52
335 336 0.179468 GTGCCCAGCCCGACTATTTA 59.821 55.000 0.00 0.00 0.00 1.40
336 337 1.077716 GTGCCCAGCCCGACTATTT 60.078 57.895 0.00 0.00 0.00 1.40
337 338 0.689745 TAGTGCCCAGCCCGACTATT 60.690 55.000 0.00 0.00 0.00 1.73
338 339 1.075525 TAGTGCCCAGCCCGACTAT 60.076 57.895 0.00 0.00 0.00 2.12
339 340 2.056223 GTAGTGCCCAGCCCGACTA 61.056 63.158 0.00 0.00 0.00 2.59
340 341 3.391382 GTAGTGCCCAGCCCGACT 61.391 66.667 0.00 0.00 0.00 4.18
341 342 4.814294 CGTAGTGCCCAGCCCGAC 62.814 72.222 0.00 0.00 0.00 4.79
342 343 3.942377 TACGTAGTGCCCAGCCCGA 62.942 63.158 0.00 0.00 45.73 5.14
343 344 3.426117 CTACGTAGTGCCCAGCCCG 62.426 68.421 14.66 0.00 45.73 6.13
344 345 2.499685 CTACGTAGTGCCCAGCCC 59.500 66.667 14.66 0.00 45.73 5.19
345 346 2.202892 GCTACGTAGTGCCCAGCC 60.203 66.667 22.98 0.82 45.73 4.85
346 347 2.202892 GGCTACGTAGTGCCCAGC 60.203 66.667 22.98 9.97 44.73 4.85
388 389 2.758327 TCCTCCATCGGACCGGTG 60.758 66.667 20.64 20.64 37.76 4.94
389 390 2.442272 CTCCTCCATCGGACCGGT 60.442 66.667 6.92 6.92 0.00 5.28
390 391 2.123854 TCTCCTCCATCGGACCGG 60.124 66.667 15.25 0.00 0.00 5.28
391 392 2.835705 CGTCTCCTCCATCGGACCG 61.836 68.421 7.84 7.84 0.00 4.79
392 393 1.448922 CTCGTCTCCTCCATCGGACC 61.449 65.000 0.00 0.00 0.00 4.46
393 394 2.026522 CTCGTCTCCTCCATCGGAC 58.973 63.158 0.00 0.00 0.00 4.79
394 395 1.824329 GCTCGTCTCCTCCATCGGA 60.824 63.158 0.00 0.00 0.00 4.55
395 396 1.388065 AAGCTCGTCTCCTCCATCGG 61.388 60.000 0.00 0.00 0.00 4.18
396 397 0.030101 GAAGCTCGTCTCCTCCATCG 59.970 60.000 0.00 0.00 0.00 3.84
397 398 0.030101 CGAAGCTCGTCTCCTCCATC 59.970 60.000 0.00 0.00 34.72 3.51
398 399 1.388065 CCGAAGCTCGTCTCCTCCAT 61.388 60.000 0.00 0.00 38.40 3.41
399 400 2.046864 CCGAAGCTCGTCTCCTCCA 61.047 63.158 0.00 0.00 38.40 3.86
400 401 1.749638 TCCGAAGCTCGTCTCCTCC 60.750 63.158 0.00 0.00 38.40 4.30
401 402 1.430228 GTCCGAAGCTCGTCTCCTC 59.570 63.158 0.00 0.00 38.40 3.71
402 403 2.047443 GGTCCGAAGCTCGTCTCCT 61.047 63.158 0.00 0.00 38.40 3.69
403 404 2.490685 GGTCCGAAGCTCGTCTCC 59.509 66.667 0.00 0.00 38.40 3.71
404 405 2.100603 CGGTCCGAAGCTCGTCTC 59.899 66.667 4.91 0.00 38.40 3.36
405 406 4.117661 GCGGTCCGAAGCTCGTCT 62.118 66.667 17.49 0.00 38.40 4.18
416 417 2.437180 CCTTAAACCCGGCGGTCC 60.437 66.667 26.32 0.00 43.71 4.46
417 418 1.742880 GTCCTTAAACCCGGCGGTC 60.743 63.158 26.32 0.00 43.71 4.79
419 420 2.816520 CGTCCTTAAACCCGGCGG 60.817 66.667 21.46 21.46 0.00 6.13
420 421 1.229975 AAACGTCCTTAAACCCGGCG 61.230 55.000 0.00 0.00 0.00 6.46
421 422 0.953727 AAAACGTCCTTAAACCCGGC 59.046 50.000 0.00 0.00 0.00 6.13
422 423 1.195222 CGAAAACGTCCTTAAACCCGG 59.805 52.381 0.00 0.00 0.00 5.73
423 424 1.195222 CCGAAAACGTCCTTAAACCCG 59.805 52.381 0.00 0.00 0.00 5.28
424 425 1.069022 GCCGAAAACGTCCTTAAACCC 60.069 52.381 0.00 0.00 0.00 4.11
425 426 1.875514 AGCCGAAAACGTCCTTAAACC 59.124 47.619 0.00 0.00 0.00 3.27
426 427 2.350102 CCAGCCGAAAACGTCCTTAAAC 60.350 50.000 0.00 0.00 0.00 2.01
427 428 1.874872 CCAGCCGAAAACGTCCTTAAA 59.125 47.619 0.00 0.00 0.00 1.52
428 429 1.515081 CCAGCCGAAAACGTCCTTAA 58.485 50.000 0.00 0.00 0.00 1.85
429 430 0.320946 CCCAGCCGAAAACGTCCTTA 60.321 55.000 0.00 0.00 0.00 2.69
430 431 1.599797 CCCAGCCGAAAACGTCCTT 60.600 57.895 0.00 0.00 0.00 3.36
431 432 2.032071 CCCAGCCGAAAACGTCCT 59.968 61.111 0.00 0.00 0.00 3.85
432 433 2.031465 TCCCAGCCGAAAACGTCC 59.969 61.111 0.00 0.00 0.00 4.79
433 434 2.322830 GGTCCCAGCCGAAAACGTC 61.323 63.158 0.00 0.00 0.00 4.34
434 435 2.281276 GGTCCCAGCCGAAAACGT 60.281 61.111 0.00 0.00 0.00 3.99
435 436 3.053896 GGGTCCCAGCCGAAAACG 61.054 66.667 1.78 0.00 0.00 3.60
436 437 2.675423 GGGGTCCCAGCCGAAAAC 60.675 66.667 10.98 0.00 36.39 2.43
437 438 2.420466 GAAGGGGTCCCAGCCGAAAA 62.420 60.000 10.98 0.00 36.39 2.29
438 439 2.856988 AAGGGGTCCCAGCCGAAA 60.857 61.111 10.98 0.00 36.39 3.46
439 440 3.327404 GAAGGGGTCCCAGCCGAA 61.327 66.667 10.98 0.00 36.39 4.30
442 443 4.097361 GACGAAGGGGTCCCAGCC 62.097 72.222 10.98 0.00 38.92 4.85
443 444 3.316573 CTGACGAAGGGGTCCCAGC 62.317 68.421 10.98 0.00 38.92 4.85
444 445 1.889530 GACTGACGAAGGGGTCCCAG 61.890 65.000 10.98 0.00 38.92 4.45
445 446 1.911766 GACTGACGAAGGGGTCCCA 60.912 63.158 10.98 0.00 38.92 4.37
446 447 2.657066 GGACTGACGAAGGGGTCCC 61.657 68.421 0.00 0.00 41.48 4.46
447 448 2.979649 GGACTGACGAAGGGGTCC 59.020 66.667 0.00 0.00 40.86 4.46
448 449 1.975407 TCGGACTGACGAAGGGGTC 60.975 63.158 0.00 0.00 40.34 4.46
449 450 2.116772 TCGGACTGACGAAGGGGT 59.883 61.111 0.00 0.00 40.34 4.95
450 451 2.572284 GTCGGACTGACGAAGGGG 59.428 66.667 0.00 0.00 45.38 4.79
457 458 4.736896 GGGCCACGTCGGACTGAC 62.737 72.222 4.39 4.17 45.62 3.51
481 482 2.175184 TTCCGACCGAGACGAACGTC 62.175 60.000 17.79 17.79 44.86 4.34
482 483 1.785041 TTTCCGACCGAGACGAACGT 61.785 55.000 0.00 0.00 0.00 3.99
483 484 0.661187 TTTTCCGACCGAGACGAACG 60.661 55.000 0.00 0.00 0.00 3.95
484 485 1.652619 GATTTTCCGACCGAGACGAAC 59.347 52.381 0.00 0.00 0.00 3.95
485 486 1.730121 CGATTTTCCGACCGAGACGAA 60.730 52.381 0.00 0.00 0.00 3.85
486 487 0.179181 CGATTTTCCGACCGAGACGA 60.179 55.000 0.00 0.00 0.00 4.20
487 488 0.455633 ACGATTTTCCGACCGAGACG 60.456 55.000 0.00 0.00 0.00 4.18
488 489 0.989890 CACGATTTTCCGACCGAGAC 59.010 55.000 0.00 0.00 0.00 3.36
489 490 0.883153 TCACGATTTTCCGACCGAGA 59.117 50.000 0.00 0.00 0.00 4.04
490 491 0.989890 GTCACGATTTTCCGACCGAG 59.010 55.000 0.00 0.00 0.00 4.63
491 492 0.388907 GGTCACGATTTTCCGACCGA 60.389 55.000 0.00 0.00 38.68 4.69
492 493 2.075761 GGTCACGATTTTCCGACCG 58.924 57.895 0.00 0.00 38.68 4.79
493 494 1.356527 CCGGTCACGATTTTCCGACC 61.357 60.000 4.00 0.00 44.86 4.79
494 495 1.356527 CCCGGTCACGATTTTCCGAC 61.357 60.000 0.00 0.00 44.86 4.79
495 496 1.079681 CCCGGTCACGATTTTCCGA 60.080 57.895 0.00 0.00 44.86 4.55
496 497 2.746803 GCCCGGTCACGATTTTCCG 61.747 63.158 0.00 0.00 44.60 4.30
497 498 2.746803 CGCCCGGTCACGATTTTCC 61.747 63.158 0.00 0.00 44.60 3.13
498 499 2.746803 CCGCCCGGTCACGATTTTC 61.747 63.158 10.03 0.00 44.60 2.29
499 500 2.744709 CCGCCCGGTCACGATTTT 60.745 61.111 10.03 0.00 44.60 1.82
518 519 4.128388 GTTCAAATGCCCGGGCGG 62.128 66.667 39.00 27.28 45.51 6.13
519 520 3.340953 CTGTTCAAATGCCCGGGCG 62.341 63.158 39.00 25.40 45.51 6.13
520 521 2.573340 CTGTTCAAATGCCCGGGC 59.427 61.111 39.40 39.40 42.35 6.13
521 522 2.350458 CCCTGTTCAAATGCCCGGG 61.350 63.158 19.09 19.09 0.00 5.73
522 523 1.184970 AACCCTGTTCAAATGCCCGG 61.185 55.000 0.00 0.00 0.00 5.73
523 524 0.678950 AAACCCTGTTCAAATGCCCG 59.321 50.000 0.00 0.00 0.00 6.13
524 525 1.691434 TCAAACCCTGTTCAAATGCCC 59.309 47.619 0.00 0.00 0.00 5.36
525 526 3.392882 CTTCAAACCCTGTTCAAATGCC 58.607 45.455 0.00 0.00 0.00 4.40
526 527 2.802247 GCTTCAAACCCTGTTCAAATGC 59.198 45.455 0.00 0.00 0.00 3.56
527 528 3.052036 CGCTTCAAACCCTGTTCAAATG 58.948 45.455 0.00 0.00 0.00 2.32
528 529 2.545742 GCGCTTCAAACCCTGTTCAAAT 60.546 45.455 0.00 0.00 0.00 2.32
529 530 1.202359 GCGCTTCAAACCCTGTTCAAA 60.202 47.619 0.00 0.00 0.00 2.69
530 531 0.383949 GCGCTTCAAACCCTGTTCAA 59.616 50.000 0.00 0.00 0.00 2.69
531 532 1.452145 GGCGCTTCAAACCCTGTTCA 61.452 55.000 7.64 0.00 0.00 3.18
532 533 1.285950 GGCGCTTCAAACCCTGTTC 59.714 57.895 7.64 0.00 0.00 3.18
533 534 2.200337 GGGCGCTTCAAACCCTGTT 61.200 57.895 7.64 0.00 40.75 3.16
534 535 2.597510 GGGCGCTTCAAACCCTGT 60.598 61.111 7.64 0.00 40.75 4.00
535 536 3.737172 CGGGCGCTTCAAACCCTG 61.737 66.667 7.64 0.00 41.86 4.45
547 548 3.792053 GACCATCTACAGCCGGGCG 62.792 68.421 14.39 11.21 0.00 6.13
548 549 1.972660 AAGACCATCTACAGCCGGGC 61.973 60.000 12.11 12.11 0.00 6.13
549 550 1.341531 CTAAGACCATCTACAGCCGGG 59.658 57.143 2.18 0.00 0.00 5.73
550 551 1.341531 CCTAAGACCATCTACAGCCGG 59.658 57.143 0.00 0.00 0.00 6.13
551 552 2.032620 ACCTAAGACCATCTACAGCCG 58.967 52.381 0.00 0.00 0.00 5.52
552 553 4.489306 AAACCTAAGACCATCTACAGCC 57.511 45.455 0.00 0.00 0.00 4.85
553 554 5.488341 TGAAAACCTAAGACCATCTACAGC 58.512 41.667 0.00 0.00 0.00 4.40
554 555 7.979444 TTTGAAAACCTAAGACCATCTACAG 57.021 36.000 0.00 0.00 0.00 2.74
555 556 8.792633 CATTTTGAAAACCTAAGACCATCTACA 58.207 33.333 0.00 0.00 0.00 2.74
556 557 9.010029 TCATTTTGAAAACCTAAGACCATCTAC 57.990 33.333 0.00 0.00 0.00 2.59
557 558 9.581289 TTCATTTTGAAAACCTAAGACCATCTA 57.419 29.630 0.00 0.00 32.71 1.98
558 559 8.477419 TTCATTTTGAAAACCTAAGACCATCT 57.523 30.769 0.00 0.00 32.71 2.90
559 560 7.814587 CCTTCATTTTGAAAACCTAAGACCATC 59.185 37.037 0.00 0.00 35.73 3.51
560 561 7.256296 CCCTTCATTTTGAAAACCTAAGACCAT 60.256 37.037 0.00 0.00 35.73 3.55
561 562 6.041523 CCCTTCATTTTGAAAACCTAAGACCA 59.958 38.462 0.00 0.00 35.73 4.02
562 563 6.041637 ACCCTTCATTTTGAAAACCTAAGACC 59.958 38.462 0.00 0.00 35.73 3.85
563 564 6.923508 CACCCTTCATTTTGAAAACCTAAGAC 59.076 38.462 0.00 0.00 35.73 3.01
564 565 6.609616 ACACCCTTCATTTTGAAAACCTAAGA 59.390 34.615 0.00 0.00 35.73 2.10
565 566 6.816136 ACACCCTTCATTTTGAAAACCTAAG 58.184 36.000 0.00 0.00 35.73 2.18
582 583 6.779860 ACTGTATTTATCTTGTGACACCCTT 58.220 36.000 2.45 0.00 0.00 3.95
650 651 3.503748 CACAGATTGACTCCTTTTGGTCC 59.496 47.826 0.00 0.00 41.38 4.46
737 744 2.949177 TGGATATGTGCCGGCTTTAT 57.051 45.000 29.70 20.32 0.00 1.40
804 811 0.185175 AAGGGGGTCGCAGTTTCTTT 59.815 50.000 0.00 0.00 0.00 2.52
855 878 6.351371 CGGAGTGGTATATATGGAGCTTGATT 60.351 42.308 0.00 0.00 0.00 2.57
865 890 2.477357 CGGCGTCGGAGTGGTATATATG 60.477 54.545 0.00 0.00 0.00 1.78
901 945 2.943690 CAGTGGCTGGATGATGAAGAAG 59.056 50.000 0.00 0.00 0.00 2.85
902 946 2.942752 GCAGTGGCTGGATGATGAAGAA 60.943 50.000 0.00 0.00 36.96 2.52
903 947 1.407851 GCAGTGGCTGGATGATGAAGA 60.408 52.381 0.00 0.00 36.96 2.87
980 1036 3.189473 CTCGCTGCTGCTCTGCTG 61.189 66.667 14.03 0.00 37.48 4.41
1179 1238 1.796459 CTTGTGTGTAACGTACCAGGC 59.204 52.381 0.00 0.00 42.39 4.85
1204 1282 4.143115 TGTGATGATTTTCTCGTTCGAAGC 60.143 41.667 0.00 0.00 0.00 3.86
1213 1294 5.388268 GCGATCGATCTGTGATGATTTTCTC 60.388 44.000 21.57 0.00 0.00 2.87
1218 1299 3.573598 GAGCGATCGATCTGTGATGATT 58.426 45.455 25.17 0.00 0.00 2.57
1222 1303 1.230324 TCGAGCGATCGATCTGTGAT 58.770 50.000 28.48 6.55 37.20 3.06
1237 1318 3.126000 TCGCTGCTCATAGATACATCGAG 59.874 47.826 0.00 0.00 0.00 4.04
1247 1332 2.292845 TCTGTCATCTCGCTGCTCATAG 59.707 50.000 0.00 0.00 0.00 2.23
1274 1393 0.034767 ATCCCTGCACATCCACACAG 60.035 55.000 0.00 0.00 0.00 3.66
1423 1542 2.527123 TTGGGGTCACCGGTGCTA 60.527 61.111 30.25 11.24 44.64 3.49
1705 1857 2.753452 GGATGACGACAGGTAGAAGTCA 59.247 50.000 0.00 0.00 44.46 3.41
1803 1964 4.208686 CTACCCTGGGAGCGTCGC 62.209 72.222 22.23 9.80 0.00 5.19
1810 1977 0.914417 CCTTCTTGGCTACCCTGGGA 60.914 60.000 22.23 1.88 0.00 4.37
1959 2171 0.321919 ACTGCACATGTTCGGCATCT 60.322 50.000 9.51 0.00 36.87 2.90
2161 2376 0.818296 CCTCTGGAGATCGACCGTTT 59.182 55.000 0.00 0.00 0.00 3.60
2337 2585 5.406780 CACTTGGCAAACACAAAACAGTTAA 59.593 36.000 0.00 0.00 0.00 2.01
2338 2586 4.926238 CACTTGGCAAACACAAAACAGTTA 59.074 37.500 0.00 0.00 0.00 2.24
2355 2603 3.289836 TGGCAATCACCATATCACTTGG 58.710 45.455 0.00 0.00 40.26 3.61
2356 2604 4.987408 TTGGCAATCACCATATCACTTG 57.013 40.909 0.00 0.00 40.13 3.16
2357 2605 5.018809 AGTTTGGCAATCACCATATCACTT 58.981 37.500 10.67 0.00 40.13 3.16
2358 2606 4.603131 AGTTTGGCAATCACCATATCACT 58.397 39.130 10.67 0.00 40.13 3.41
2359 2607 4.989279 AGTTTGGCAATCACCATATCAC 57.011 40.909 10.67 0.00 40.13 3.06
2360 2608 5.015515 TGAAGTTTGGCAATCACCATATCA 58.984 37.500 10.67 3.17 40.13 2.15
2361 2609 5.105797 TGTGAAGTTTGGCAATCACCATATC 60.106 40.000 22.78 8.20 41.08 1.63
2362 2610 4.771577 TGTGAAGTTTGGCAATCACCATAT 59.228 37.500 22.78 0.17 41.08 1.78
2363 2611 4.148079 TGTGAAGTTTGGCAATCACCATA 58.852 39.130 22.78 10.83 41.08 2.74
2364 2612 2.964464 TGTGAAGTTTGGCAATCACCAT 59.036 40.909 22.78 4.37 41.08 3.55
2365 2613 2.382882 TGTGAAGTTTGGCAATCACCA 58.617 42.857 22.78 12.14 41.08 4.17
2366 2614 3.451141 TTGTGAAGTTTGGCAATCACC 57.549 42.857 22.78 10.16 41.08 4.02
2367 2615 5.523188 TCAATTTGTGAAGTTTGGCAATCAC 59.477 36.000 20.27 20.27 41.90 3.06
2368 2616 5.668471 TCAATTTGTGAAGTTTGGCAATCA 58.332 33.333 10.67 4.60 31.51 2.57
2369 2617 6.601741 TTCAATTTGTGAAGTTTGGCAATC 57.398 33.333 0.00 0.00 41.47 2.67
2370 2618 6.998968 TTTCAATTTGTGAAGTTTGGCAAT 57.001 29.167 0.00 0.00 46.85 3.56
2371 2619 6.808008 TTTTCAATTTGTGAAGTTTGGCAA 57.192 29.167 0.00 0.00 46.85 4.52
2372 2620 6.596888 TCATTTTCAATTTGTGAAGTTTGGCA 59.403 30.769 0.00 0.00 46.85 4.92
2373 2621 6.906678 GTCATTTTCAATTTGTGAAGTTTGGC 59.093 34.615 0.00 0.00 46.85 4.52
2391 2658 7.361799 GCCGTTAAAGAAGATACCAGTCATTTT 60.362 37.037 0.00 0.00 0.00 1.82
2414 2681 1.925229 TAAACCTCCGTAAATCGCCG 58.075 50.000 0.00 0.00 38.35 6.46
2415 2682 2.029606 CGTTAAACCTCCGTAAATCGCC 59.970 50.000 0.00 0.00 38.35 5.54
2416 2683 2.029606 CCGTTAAACCTCCGTAAATCGC 59.970 50.000 0.00 0.00 38.35 4.58
2418 2685 2.352651 GCCCGTTAAACCTCCGTAAATC 59.647 50.000 0.00 0.00 0.00 2.17
2419 2686 2.026915 AGCCCGTTAAACCTCCGTAAAT 60.027 45.455 0.00 0.00 0.00 1.40
2439 2752 2.686405 TCAGCCAATCAATGCTAAGCAG 59.314 45.455 0.00 0.00 43.65 4.24
2440 2753 2.686405 CTCAGCCAATCAATGCTAAGCA 59.314 45.455 0.00 0.00 44.86 3.91
2441 2754 2.947652 TCTCAGCCAATCAATGCTAAGC 59.052 45.455 0.00 0.00 35.69 3.09
2442 2755 5.769484 AATCTCAGCCAATCAATGCTAAG 57.231 39.130 0.00 0.00 35.69 2.18
2443 2756 5.163488 CCAAATCTCAGCCAATCAATGCTAA 60.163 40.000 0.00 0.00 35.69 3.09
2444 2757 4.340097 CCAAATCTCAGCCAATCAATGCTA 59.660 41.667 0.00 0.00 35.69 3.49
2446 2759 3.454375 CCAAATCTCAGCCAATCAATGC 58.546 45.455 0.00 0.00 0.00 3.56
2447 2760 3.132289 AGCCAAATCTCAGCCAATCAATG 59.868 43.478 0.00 0.00 0.00 2.82
2449 2762 2.811410 AGCCAAATCTCAGCCAATCAA 58.189 42.857 0.00 0.00 0.00 2.57
2451 2764 4.989279 TTAAGCCAAATCTCAGCCAATC 57.011 40.909 0.00 0.00 0.00 2.67
2454 2767 3.949754 CTCATTAAGCCAAATCTCAGCCA 59.050 43.478 0.00 0.00 0.00 4.75
2455 2768 3.317430 CCTCATTAAGCCAAATCTCAGCC 59.683 47.826 0.00 0.00 0.00 4.85
2456 2769 3.243334 GCCTCATTAAGCCAAATCTCAGC 60.243 47.826 0.00 0.00 0.00 4.26
2457 2770 3.949754 TGCCTCATTAAGCCAAATCTCAG 59.050 43.478 0.00 0.00 0.00 3.35
2459 2772 3.317430 CCTGCCTCATTAAGCCAAATCTC 59.683 47.826 0.00 0.00 0.00 2.75
2460 2773 3.294214 CCTGCCTCATTAAGCCAAATCT 58.706 45.455 0.00 0.00 0.00 2.40
2461 2774 2.223900 GCCTGCCTCATTAAGCCAAATC 60.224 50.000 0.00 0.00 0.00 2.17
2464 2777 0.684153 GGCCTGCCTCATTAAGCCAA 60.684 55.000 0.00 0.00 40.20 4.52
2466 2779 1.829970 GGGCCTGCCTCATTAAGCC 60.830 63.158 8.29 0.00 39.73 4.35
2467 2780 1.076777 TGGGCCTGCCTCATTAAGC 60.077 57.895 4.53 0.00 36.10 3.09
2468 2781 0.753111 GGTGGGCCTGCCTCATTAAG 60.753 60.000 4.53 0.00 36.10 1.85
2469 2782 1.306296 GGTGGGCCTGCCTCATTAA 59.694 57.895 4.53 0.00 36.10 1.40
2470 2783 2.689691 GGGTGGGCCTGCCTCATTA 61.690 63.158 4.53 0.00 36.10 1.90
2471 2784 4.066139 GGGTGGGCCTGCCTCATT 62.066 66.667 4.53 0.00 36.10 2.57
2477 2790 3.808218 TTTCACTGGGTGGGCCTGC 62.808 63.158 4.53 0.00 33.87 4.85
2478 2791 0.758685 TTTTTCACTGGGTGGGCCTG 60.759 55.000 4.53 0.00 33.87 4.85
2479 2792 0.759060 GTTTTTCACTGGGTGGGCCT 60.759 55.000 4.53 0.00 33.87 5.19
2480 2793 1.045911 TGTTTTTCACTGGGTGGGCC 61.046 55.000 0.00 0.00 33.87 5.80
2481 2794 0.389025 CTGTTTTTCACTGGGTGGGC 59.611 55.000 0.00 0.00 33.87 5.36
2482 2795 1.039856 CCTGTTTTTCACTGGGTGGG 58.960 55.000 0.00 0.00 40.18 4.61
2487 2800 2.080654 TTCCCCCTGTTTTTCACTGG 57.919 50.000 0.00 0.00 42.89 4.00
2489 2802 5.304357 CACTAATTTCCCCCTGTTTTTCACT 59.696 40.000 0.00 0.00 0.00 3.41
2490 2803 5.510690 CCACTAATTTCCCCCTGTTTTTCAC 60.511 44.000 0.00 0.00 0.00 3.18
2491 2804 4.591072 CCACTAATTTCCCCCTGTTTTTCA 59.409 41.667 0.00 0.00 0.00 2.69
2492 2805 4.836175 TCCACTAATTTCCCCCTGTTTTTC 59.164 41.667 0.00 0.00 0.00 2.29
2497 2810 1.923148 CCTCCACTAATTTCCCCCTGT 59.077 52.381 0.00 0.00 0.00 4.00
2498 2811 1.215423 CCCTCCACTAATTTCCCCCTG 59.785 57.143 0.00 0.00 0.00 4.45
2499 2812 1.608425 CCCTCCACTAATTTCCCCCT 58.392 55.000 0.00 0.00 0.00 4.79
2501 2814 0.629058 TGCCCTCCACTAATTTCCCC 59.371 55.000 0.00 0.00 0.00 4.81
2502 2815 1.763968 GTGCCCTCCACTAATTTCCC 58.236 55.000 0.00 0.00 41.35 3.97
2503 2816 1.379527 CGTGCCCTCCACTAATTTCC 58.620 55.000 0.00 0.00 42.42 3.13
2504 2817 0.733150 GCGTGCCCTCCACTAATTTC 59.267 55.000 0.00 0.00 42.42 2.17
2506 2819 1.449601 CGCGTGCCCTCCACTAATT 60.450 57.895 0.00 0.00 42.42 1.40
2507 2820 2.186903 CGCGTGCCCTCCACTAAT 59.813 61.111 0.00 0.00 42.42 1.73
2518 2831 2.951475 TTATGGATTCCCCCGCGTGC 62.951 60.000 4.92 0.00 0.00 5.34
2519 2832 0.464735 TTTATGGATTCCCCCGCGTG 60.465 55.000 4.92 0.00 0.00 5.34
2520 2833 0.256464 TTTTATGGATTCCCCCGCGT 59.744 50.000 4.92 0.00 0.00 6.01
2521 2834 0.951558 CTTTTATGGATTCCCCCGCG 59.048 55.000 0.00 0.00 0.00 6.46
2522 2835 1.954382 GACTTTTATGGATTCCCCCGC 59.046 52.381 0.00 0.00 0.00 6.13
2523 2836 2.583143 GGACTTTTATGGATTCCCCCG 58.417 52.381 0.00 0.00 0.00 5.73
2524 2837 2.092049 ACGGACTTTTATGGATTCCCCC 60.092 50.000 0.00 0.00 0.00 5.40
2525 2838 3.292492 ACGGACTTTTATGGATTCCCC 57.708 47.619 0.00 0.00 0.00 4.81
2526 2839 4.014406 ACAACGGACTTTTATGGATTCCC 58.986 43.478 0.00 0.00 0.00 3.97
2527 2840 5.638596 AACAACGGACTTTTATGGATTCC 57.361 39.130 0.00 0.00 0.00 3.01
2528 2841 5.793457 CGAAACAACGGACTTTTATGGATTC 59.207 40.000 0.00 0.00 0.00 2.52
2529 2842 5.239963 ACGAAACAACGGACTTTTATGGATT 59.760 36.000 0.00 0.00 37.61 3.01
2530 2843 4.758165 ACGAAACAACGGACTTTTATGGAT 59.242 37.500 0.00 0.00 37.61 3.41
2531 2844 4.128643 ACGAAACAACGGACTTTTATGGA 58.871 39.130 0.00 0.00 37.61 3.41
2532 2845 4.477302 ACGAAACAACGGACTTTTATGG 57.523 40.909 0.00 0.00 37.61 2.74
2533 2846 4.907582 GGAACGAAACAACGGACTTTTATG 59.092 41.667 0.00 0.00 37.61 1.90
2534 2847 5.099484 GGAACGAAACAACGGACTTTTAT 57.901 39.130 0.00 0.00 37.61 1.40
2535 2848 4.534794 GGAACGAAACAACGGACTTTTA 57.465 40.909 0.00 0.00 37.61 1.52
2536 2849 3.409851 GGAACGAAACAACGGACTTTT 57.590 42.857 0.00 0.00 37.61 2.27
2552 2865 3.181527 GGAAAATACTACACGCACGGAAC 60.182 47.826 0.00 0.00 0.00 3.62
2553 2866 2.995258 GGAAAATACTACACGCACGGAA 59.005 45.455 0.00 0.00 0.00 4.30
2554 2867 2.609350 GGAAAATACTACACGCACGGA 58.391 47.619 0.00 0.00 0.00 4.69
2555 2868 1.662122 GGGAAAATACTACACGCACGG 59.338 52.381 0.00 0.00 0.00 4.94
2556 2869 2.613691 AGGGAAAATACTACACGCACG 58.386 47.619 0.00 0.00 0.00 5.34
2557 2870 4.251268 AGAAGGGAAAATACTACACGCAC 58.749 43.478 0.00 0.00 0.00 5.34
2558 2871 4.546829 AGAAGGGAAAATACTACACGCA 57.453 40.909 0.00 0.00 0.00 5.24
2559 2872 5.874895 AAAGAAGGGAAAATACTACACGC 57.125 39.130 0.00 0.00 0.00 5.34
2564 2877 9.925545 GGGGTAATTAAAGAAGGGAAAATACTA 57.074 33.333 0.00 0.00 0.00 1.82
2565 2878 8.403474 TGGGGTAATTAAAGAAGGGAAAATACT 58.597 33.333 0.00 0.00 0.00 2.12
2566 2879 8.598202 TGGGGTAATTAAAGAAGGGAAAATAC 57.402 34.615 0.00 0.00 0.00 1.89
2568 2881 9.967559 ATATGGGGTAATTAAAGAAGGGAAAAT 57.032 29.630 0.00 0.00 0.00 1.82
2570 2883 9.871175 GTATATGGGGTAATTAAAGAAGGGAAA 57.129 33.333 0.00 0.00 0.00 3.13
2571 2884 9.244978 AGTATATGGGGTAATTAAAGAAGGGAA 57.755 33.333 0.00 0.00 0.00 3.97
2572 2885 8.823810 AGTATATGGGGTAATTAAAGAAGGGA 57.176 34.615 0.00 0.00 0.00 4.20
2573 2886 8.107729 GGAGTATATGGGGTAATTAAAGAAGGG 58.892 40.741 0.00 0.00 0.00 3.95
2574 2887 8.107729 GGGAGTATATGGGGTAATTAAAGAAGG 58.892 40.741 0.00 0.00 0.00 3.46
2575 2888 8.107729 GGGGAGTATATGGGGTAATTAAAGAAG 58.892 40.741 0.00 0.00 0.00 2.85
2576 2889 7.256763 CGGGGAGTATATGGGGTAATTAAAGAA 60.257 40.741 0.00 0.00 0.00 2.52
2577 2890 6.214005 CGGGGAGTATATGGGGTAATTAAAGA 59.786 42.308 0.00 0.00 0.00 2.52
2578 2891 6.214005 TCGGGGAGTATATGGGGTAATTAAAG 59.786 42.308 0.00 0.00 0.00 1.85
2579 2892 6.090186 TCGGGGAGTATATGGGGTAATTAAA 58.910 40.000 0.00 0.00 0.00 1.52
2580 2893 5.663631 TCGGGGAGTATATGGGGTAATTAA 58.336 41.667 0.00 0.00 0.00 1.40
2581 2894 5.274822 CTCGGGGAGTATATGGGGTAATTA 58.725 45.833 0.00 0.00 0.00 1.40
2582 2895 4.101856 CTCGGGGAGTATATGGGGTAATT 58.898 47.826 0.00 0.00 0.00 1.40
2583 2896 3.721021 CTCGGGGAGTATATGGGGTAAT 58.279 50.000 0.00 0.00 0.00 1.89
2584 2897 2.824303 GCTCGGGGAGTATATGGGGTAA 60.824 54.545 0.00 0.00 31.39 2.85
2585 2898 1.272872 GCTCGGGGAGTATATGGGGTA 60.273 57.143 0.00 0.00 31.39 3.69
2586 2899 0.544595 GCTCGGGGAGTATATGGGGT 60.545 60.000 0.00 0.00 31.39 4.95
2587 2900 1.605058 CGCTCGGGGAGTATATGGGG 61.605 65.000 0.00 0.00 31.39 4.96
2588 2901 0.611062 TCGCTCGGGGAGTATATGGG 60.611 60.000 0.00 0.00 31.39 4.00
2589 2902 1.254026 TTCGCTCGGGGAGTATATGG 58.746 55.000 0.00 0.00 31.39 2.74
2590 2903 2.231478 ACATTCGCTCGGGGAGTATATG 59.769 50.000 0.00 0.00 31.39 1.78
2610 2923 5.476945 AGGGTTTTCATCCAGTGAACAATAC 59.523 40.000 0.00 0.00 46.14 1.89
2643 2956 3.578688 GTCCATCAAATGACCAAAGCAC 58.421 45.455 0.00 0.00 0.00 4.40
2671 2984 1.754226 GTTTGGACTGCTTGGGTTTCA 59.246 47.619 0.00 0.00 0.00 2.69
2718 3033 7.496747 TGGCAAATATATCTTTTAAGGCCAAC 58.503 34.615 5.01 0.00 43.95 3.77
2794 3109 8.946085 TGTGTTTTGTTGTTTTATTTGGCAATA 58.054 25.926 0.00 0.00 0.00 1.90
2912 3230 0.313672 TTCTGCATTTTGGACCACGC 59.686 50.000 0.00 0.00 0.00 5.34
2970 3512 4.915667 GGCAAATTCCTTGTACGTCTTTTC 59.084 41.667 0.00 0.00 37.36 2.29
3033 3577 3.663995 TGTCATGGCAATTTTCCTGTG 57.336 42.857 0.00 0.00 0.00 3.66
3035 3579 6.563222 ATTTTTGTCATGGCAATTTTCCTG 57.437 33.333 14.57 0.00 0.00 3.86
3058 3602 9.678260 ATTTTTAGTGGCATGGCAATTTTATTA 57.322 25.926 27.46 5.47 0.00 0.98
3059 3603 7.992754 TTTTTAGTGGCATGGCAATTTTATT 57.007 28.000 27.46 8.05 0.00 1.40
3061 3605 9.507329 TTTATTTTTAGTGGCATGGCAATTTTA 57.493 25.926 27.46 12.76 0.00 1.52
3062 3606 7.992754 TTATTTTTAGTGGCATGGCAATTTT 57.007 28.000 27.46 13.73 0.00 1.82
3066 3610 7.574592 GCAATTTTATTTTTAGTGGCATGGCAA 60.575 33.333 25.11 6.53 0.00 4.52
3068 3612 6.257423 GCAATTTTATTTTTAGTGGCATGGC 58.743 36.000 13.29 13.29 0.00 4.40
3076 3620 6.105657 GCGCATGGCAATTTTATTTTTAGT 57.894 33.333 0.30 0.00 42.87 2.24
3094 3638 1.738908 GGCAAATTTGGAAATGCGCAT 59.261 42.857 19.28 19.28 31.54 4.73
3095 3639 1.155042 GGCAAATTTGGAAATGCGCA 58.845 45.000 14.96 14.96 31.54 6.09
3096 3640 1.155042 TGGCAAATTTGGAAATGCGC 58.845 45.000 19.47 0.00 0.00 6.09
3097 3641 3.001414 TCATGGCAAATTTGGAAATGCG 58.999 40.909 19.47 0.00 0.00 4.73
3098 3642 5.570234 ATTCATGGCAAATTTGGAAATGC 57.430 34.783 19.47 4.67 0.00 3.56
3099 3643 8.178964 CACTTATTCATGGCAAATTTGGAAATG 58.821 33.333 19.47 10.33 0.00 2.32
3100 3644 8.102047 TCACTTATTCATGGCAAATTTGGAAAT 58.898 29.630 19.47 7.38 0.00 2.17
3101 3645 7.448420 TCACTTATTCATGGCAAATTTGGAAA 58.552 30.769 19.47 0.90 0.00 3.13
3102 3646 7.002250 TCACTTATTCATGGCAAATTTGGAA 57.998 32.000 19.47 13.74 0.00 3.53
3103 3647 6.602410 TCACTTATTCATGGCAAATTTGGA 57.398 33.333 19.47 5.61 0.00 3.53
3104 3648 7.852971 AATCACTTATTCATGGCAAATTTGG 57.147 32.000 19.47 3.24 0.00 3.28
3110 3654 9.598517 GGAAATTTAATCACTTATTCATGGCAA 57.401 29.630 0.00 0.00 0.00 4.52
3111 3655 7.920151 CGGAAATTTAATCACTTATTCATGGCA 59.080 33.333 0.00 0.00 0.00 4.92
3112 3656 8.134895 TCGGAAATTTAATCACTTATTCATGGC 58.865 33.333 0.00 0.00 0.00 4.40
3116 3660 9.567848 GCTTTCGGAAATTTAATCACTTATTCA 57.432 29.630 3.24 0.00 0.00 2.57
3117 3661 9.788960 AGCTTTCGGAAATTTAATCACTTATTC 57.211 29.630 3.24 0.00 0.00 1.75
3119 3663 9.573133 CAAGCTTTCGGAAATTTAATCACTTAT 57.427 29.630 3.24 0.00 0.00 1.73
3120 3664 7.540745 GCAAGCTTTCGGAAATTTAATCACTTA 59.459 33.333 3.24 0.00 0.00 2.24
3121 3665 6.366061 GCAAGCTTTCGGAAATTTAATCACTT 59.634 34.615 3.24 0.00 0.00 3.16
3122 3666 5.863935 GCAAGCTTTCGGAAATTTAATCACT 59.136 36.000 3.24 0.00 0.00 3.41
3123 3667 5.062183 GGCAAGCTTTCGGAAATTTAATCAC 59.938 40.000 3.24 0.00 0.00 3.06
3124 3668 5.167845 GGCAAGCTTTCGGAAATTTAATCA 58.832 37.500 3.24 0.00 0.00 2.57
3125 3669 5.167845 TGGCAAGCTTTCGGAAATTTAATC 58.832 37.500 3.24 0.00 0.00 1.75
3126 3670 5.146010 TGGCAAGCTTTCGGAAATTTAAT 57.854 34.783 3.24 0.00 0.00 1.40
3127 3671 4.592485 TGGCAAGCTTTCGGAAATTTAA 57.408 36.364 3.24 0.00 0.00 1.52
3128 3672 4.799564 ATGGCAAGCTTTCGGAAATTTA 57.200 36.364 3.24 0.00 0.00 1.40
3129 3673 3.683365 ATGGCAAGCTTTCGGAAATTT 57.317 38.095 3.24 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.