Multiple sequence alignment - TraesCS4D01G322600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G322600 chr4D 100.000 3089 0 0 1 3089 484619694 484622782 0.000000e+00 5705.0
1 TraesCS4D01G322600 chr4D 96.934 848 21 4 2245 3089 435224317 435223472 0.000000e+00 1417.0
2 TraesCS4D01G322600 chr4D 96.344 848 27 3 2245 3089 51989528 51990374 0.000000e+00 1391.0
3 TraesCS4D01G322600 chr4D 100.000 47 0 0 995 1041 484620642 484620688 1.530000e-13 87.9
4 TraesCS4D01G322600 chr4D 100.000 47 0 0 949 995 484620688 484620734 1.530000e-13 87.9
5 TraesCS4D01G322600 chr4B 95.389 1171 36 3 995 2153 616967420 616968584 0.000000e+00 1847.0
6 TraesCS4D01G322600 chr4B 90.364 550 31 6 5 546 616966875 616967410 0.000000e+00 702.0
7 TraesCS4D01G322600 chr4B 93.617 47 3 0 949 995 616967420 616967466 1.540000e-08 71.3
8 TraesCS4D01G322600 chr5A 94.626 1135 43 3 995 2114 665443558 665444689 0.000000e+00 1742.0
9 TraesCS4D01G322600 chr5A 93.011 186 12 1 362 546 665443363 665443548 1.410000e-68 270.0
10 TraesCS4D01G322600 chrUn 96.923 845 22 3 2248 3089 103386805 103385962 0.000000e+00 1413.0
11 TraesCS4D01G322600 chrUn 87.530 826 100 1 1241 2066 336370594 336369772 0.000000e+00 952.0
12 TraesCS4D01G322600 chrUn 85.201 946 117 9 1122 2066 336373361 336372438 0.000000e+00 950.0
13 TraesCS4D01G322600 chrUn 81.905 105 17 2 1122 1225 336370695 336370592 1.530000e-13 87.9
14 TraesCS4D01G322600 chr3D 96.919 844 22 4 2248 3089 291731673 291732514 0.000000e+00 1411.0
15 TraesCS4D01G322600 chr3D 96.331 845 27 3 2248 3089 363125553 363126396 0.000000e+00 1386.0
16 TraesCS4D01G322600 chr3D 85.538 1051 117 15 1066 2088 21793036 21794079 0.000000e+00 1066.0
17 TraesCS4D01G322600 chr3D 86.345 952 120 3 1119 2069 21888481 21889423 0.000000e+00 1029.0
18 TraesCS4D01G322600 chr2D 96.576 847 23 5 2246 3089 573964943 573965786 0.000000e+00 1399.0
19 TraesCS4D01G322600 chr2D 96.734 398 13 0 546 943 124470459 124470062 0.000000e+00 664.0
20 TraesCS4D01G322600 chr2D 96.030 403 16 0 547 949 293156492 293156090 0.000000e+00 656.0
21 TraesCS4D01G322600 chr7D 96.458 847 26 3 2246 3089 137764432 137765277 0.000000e+00 1395.0
22 TraesCS4D01G322600 chr7D 96.340 847 23 5 2246 3088 525708544 525707702 0.000000e+00 1386.0
23 TraesCS4D01G322600 chr7D 96.491 399 14 0 545 943 142684421 142684819 0.000000e+00 660.0
24 TraesCS4D01G322600 chr7D 96.250 400 15 0 547 946 421104400 421104001 0.000000e+00 656.0
25 TraesCS4D01G322600 chr3A 96.222 847 27 4 2246 3089 740310650 740311494 0.000000e+00 1382.0
26 TraesCS4D01G322600 chr3A 85.213 1055 115 21 1065 2088 31559186 31560230 0.000000e+00 1046.0
27 TraesCS4D01G322600 chr3A 85.759 948 126 2 1119 2066 31603549 31604487 0.000000e+00 994.0
28 TraesCS4D01G322600 chr3A 96.000 100 4 0 2149 2248 136566855 136566756 2.460000e-36 163.0
29 TraesCS4D01G322600 chr3A 94.949 99 5 0 2150 2248 93038941 93038843 4.120000e-34 156.0
30 TraesCS4D01G322600 chr3B 85.266 1052 120 14 1065 2088 37970718 37971762 0.000000e+00 1051.0
31 TraesCS4D01G322600 chr5D 97.236 398 11 0 546 943 255469496 255469893 0.000000e+00 675.0
32 TraesCS4D01G322600 chr5D 97.229 397 11 0 547 943 536686431 536686035 0.000000e+00 673.0
33 TraesCS4D01G322600 chr6D 96.509 401 14 0 543 943 30009906 30010306 0.000000e+00 664.0
34 TraesCS4D01G322600 chr1D 96.474 397 14 0 547 943 144940378 144940774 0.000000e+00 656.0
35 TraesCS4D01G322600 chr1D 96.474 397 14 0 547 943 432697637 432697241 0.000000e+00 656.0
36 TraesCS4D01G322600 chr7B 96.939 98 3 0 2150 2247 73330369 73330466 6.850000e-37 165.0
37 TraesCS4D01G322600 chr4A 95.960 99 4 0 2150 2248 484865918 484865820 8.860000e-36 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G322600 chr4D 484619694 484622782 3088 False 1960.266667 5705 100.000000 1 3089 3 chr4D.!!$F2 3088
1 TraesCS4D01G322600 chr4D 435223472 435224317 845 True 1417.000000 1417 96.934000 2245 3089 1 chr4D.!!$R1 844
2 TraesCS4D01G322600 chr4D 51989528 51990374 846 False 1391.000000 1391 96.344000 2245 3089 1 chr4D.!!$F1 844
3 TraesCS4D01G322600 chr4B 616966875 616968584 1709 False 873.433333 1847 93.123333 5 2153 3 chr4B.!!$F1 2148
4 TraesCS4D01G322600 chr5A 665443363 665444689 1326 False 1006.000000 1742 93.818500 362 2114 2 chr5A.!!$F1 1752
5 TraesCS4D01G322600 chrUn 103385962 103386805 843 True 1413.000000 1413 96.923000 2248 3089 1 chrUn.!!$R1 841
6 TraesCS4D01G322600 chrUn 336369772 336373361 3589 True 663.300000 952 84.878667 1122 2066 3 chrUn.!!$R2 944
7 TraesCS4D01G322600 chr3D 291731673 291732514 841 False 1411.000000 1411 96.919000 2248 3089 1 chr3D.!!$F3 841
8 TraesCS4D01G322600 chr3D 363125553 363126396 843 False 1386.000000 1386 96.331000 2248 3089 1 chr3D.!!$F4 841
9 TraesCS4D01G322600 chr3D 21793036 21794079 1043 False 1066.000000 1066 85.538000 1066 2088 1 chr3D.!!$F1 1022
10 TraesCS4D01G322600 chr3D 21888481 21889423 942 False 1029.000000 1029 86.345000 1119 2069 1 chr3D.!!$F2 950
11 TraesCS4D01G322600 chr2D 573964943 573965786 843 False 1399.000000 1399 96.576000 2246 3089 1 chr2D.!!$F1 843
12 TraesCS4D01G322600 chr7D 137764432 137765277 845 False 1395.000000 1395 96.458000 2246 3089 1 chr7D.!!$F1 843
13 TraesCS4D01G322600 chr7D 525707702 525708544 842 True 1386.000000 1386 96.340000 2246 3088 1 chr7D.!!$R2 842
14 TraesCS4D01G322600 chr3A 740310650 740311494 844 False 1382.000000 1382 96.222000 2246 3089 1 chr3A.!!$F3 843
15 TraesCS4D01G322600 chr3A 31559186 31560230 1044 False 1046.000000 1046 85.213000 1065 2088 1 chr3A.!!$F1 1023
16 TraesCS4D01G322600 chr3A 31603549 31604487 938 False 994.000000 994 85.759000 1119 2066 1 chr3A.!!$F2 947
17 TraesCS4D01G322600 chr3B 37970718 37971762 1044 False 1051.000000 1051 85.266000 1065 2088 1 chr3B.!!$F1 1023

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
881 891 0.036765 AAGGTCAGCCGCGTGAAATA 60.037 50.0 4.92 0.0 40.5 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2221 4912 1.133915 TCGTCCAAAAGAGCCCAAAGT 60.134 47.619 0.0 0.0 0.0 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.766007 CGCAGTATGGAGAATCAAAATCG 58.234 43.478 0.00 0.00 36.25 3.34
33 34 5.703876 AGAATCAAAATCGCAAAAGACCTC 58.296 37.500 0.00 0.00 0.00 3.85
34 35 3.536158 TCAAAATCGCAAAAGACCTCG 57.464 42.857 0.00 0.00 0.00 4.63
73 74 6.373005 TTGTCTAGAATCAACCCAGAATCA 57.627 37.500 0.00 0.00 0.00 2.57
74 75 5.734720 TGTCTAGAATCAACCCAGAATCAC 58.265 41.667 0.00 0.00 0.00 3.06
75 76 5.248248 TGTCTAGAATCAACCCAGAATCACA 59.752 40.000 0.00 0.00 0.00 3.58
76 77 5.814705 GTCTAGAATCAACCCAGAATCACAG 59.185 44.000 0.00 0.00 0.00 3.66
77 78 3.350833 AGAATCAACCCAGAATCACAGC 58.649 45.455 0.00 0.00 0.00 4.40
78 79 1.742761 ATCAACCCAGAATCACAGCG 58.257 50.000 0.00 0.00 0.00 5.18
79 80 0.955428 TCAACCCAGAATCACAGCGC 60.955 55.000 0.00 0.00 0.00 5.92
80 81 1.073025 AACCCAGAATCACAGCGCA 59.927 52.632 11.47 0.00 0.00 6.09
81 82 0.537143 AACCCAGAATCACAGCGCAA 60.537 50.000 11.47 0.00 0.00 4.85
116 117 0.398318 AGGCGATTCTAGGCAATCCC 59.602 55.000 0.00 0.00 36.55 3.85
128 129 3.794911 AGGCAATCCCTCAAAGGAAAAT 58.205 40.909 0.00 0.00 41.21 1.82
129 130 3.516700 AGGCAATCCCTCAAAGGAAAATG 59.483 43.478 0.00 0.00 41.21 2.32
133 134 5.409520 GCAATCCCTCAAAGGAAAATGTTTC 59.590 40.000 0.00 0.00 40.04 2.78
162 163 3.527665 AGCAAGTACCCCTATTGGACAAT 59.472 43.478 2.80 2.80 35.39 2.71
186 187 7.298507 TGTATTTAGAACGTAAATGCCACTC 57.701 36.000 5.27 0.00 31.45 3.51
189 190 0.725117 GAACGTAAATGCCACTCGGG 59.275 55.000 0.00 0.00 40.85 5.14
204 205 3.681473 GGGCCAGACCGAAAAAGG 58.319 61.111 4.39 0.00 40.62 3.11
217 218 0.249280 AAAAAGGCCCAAAACGCTCG 60.249 50.000 0.00 0.00 0.00 5.03
224 225 0.391130 CCCAAAACGCTCGATCCAGA 60.391 55.000 0.00 0.00 0.00 3.86
231 232 1.733402 CGCTCGATCCAGAGAGGCTT 61.733 60.000 2.14 0.00 40.57 4.35
265 266 0.255890 CCCACTCATTCGTCCCCAAT 59.744 55.000 0.00 0.00 0.00 3.16
272 273 1.665679 CATTCGTCCCCAATCAACTCG 59.334 52.381 0.00 0.00 0.00 4.18
273 274 0.672401 TTCGTCCCCAATCAACTCGC 60.672 55.000 0.00 0.00 0.00 5.03
274 275 1.079127 CGTCCCCAATCAACTCGCT 60.079 57.895 0.00 0.00 0.00 4.93
315 316 7.524717 AAGCACTTTGTGATATTTGTAACCT 57.475 32.000 1.52 0.00 35.23 3.50
340 341 9.157259 CTGCTTTTAAATTGCAATGTTAAACAC 57.843 29.630 23.86 20.55 36.22 3.32
469 478 7.509141 TCATCACACAACTCATACAACAATT 57.491 32.000 0.00 0.00 0.00 2.32
512 522 4.618965 AGAACTAGACGGCGGATTTTATC 58.381 43.478 13.24 0.00 0.00 1.75
546 556 1.502231 CGGGCAGATTACCAGAATCG 58.498 55.000 0.00 0.00 0.00 3.34
547 557 1.873903 CGGGCAGATTACCAGAATCGG 60.874 57.143 0.00 0.00 0.00 4.18
548 558 1.230324 GGCAGATTACCAGAATCGGC 58.770 55.000 12.21 12.21 43.75 5.54
549 559 1.475034 GGCAGATTACCAGAATCGGCA 60.475 52.381 19.25 0.00 45.40 5.69
550 560 2.288666 GCAGATTACCAGAATCGGCAA 58.711 47.619 14.75 0.00 43.86 4.52
551 561 2.682856 GCAGATTACCAGAATCGGCAAA 59.317 45.455 14.75 0.00 43.86 3.68
553 563 4.202050 GCAGATTACCAGAATCGGCAAATT 60.202 41.667 14.75 0.00 43.86 1.82
554 564 5.679638 GCAGATTACCAGAATCGGCAAATTT 60.680 40.000 14.75 0.00 43.86 1.82
555 565 5.745294 CAGATTACCAGAATCGGCAAATTTG 59.255 40.000 14.03 14.03 0.00 2.32
556 566 5.652014 AGATTACCAGAATCGGCAAATTTGA 59.348 36.000 22.31 1.15 0.00 2.69
557 567 3.575965 ACCAGAATCGGCAAATTTGAC 57.424 42.857 22.31 18.50 0.00 3.18
558 568 2.890311 ACCAGAATCGGCAAATTTGACA 59.110 40.909 23.49 11.20 35.35 3.58
559 569 3.320541 ACCAGAATCGGCAAATTTGACAA 59.679 39.130 23.49 5.88 35.35 3.18
560 570 4.202202 ACCAGAATCGGCAAATTTGACAAA 60.202 37.500 23.49 11.38 35.35 2.83
561 571 4.931002 CCAGAATCGGCAAATTTGACAAAT 59.069 37.500 23.49 13.14 35.35 2.32
562 572 5.409214 CCAGAATCGGCAAATTTGACAAATT 59.591 36.000 23.49 20.03 42.62 1.82
580 590 9.834628 TGACAAATTTGACCTATAAACGAAATC 57.165 29.630 24.64 6.30 0.00 2.17
581 591 9.834628 GACAAATTTGACCTATAAACGAAATCA 57.165 29.630 24.64 0.00 0.00 2.57
587 597 9.834628 TTTGACCTATAAACGAAATCAAATCAC 57.165 29.630 0.00 0.00 31.51 3.06
588 598 8.554835 TGACCTATAAACGAAATCAAATCACA 57.445 30.769 0.00 0.00 0.00 3.58
589 599 8.664798 TGACCTATAAACGAAATCAAATCACAG 58.335 33.333 0.00 0.00 0.00 3.66
590 600 8.786826 ACCTATAAACGAAATCAAATCACAGA 57.213 30.769 0.00 0.00 0.00 3.41
591 601 9.226606 ACCTATAAACGAAATCAAATCACAGAA 57.773 29.630 0.00 0.00 0.00 3.02
596 606 7.858052 AACGAAATCAAATCACAGAATGAAC 57.142 32.000 0.00 0.00 41.93 3.18
597 607 7.206981 ACGAAATCAAATCACAGAATGAACT 57.793 32.000 0.00 0.00 41.93 3.01
598 608 7.080099 ACGAAATCAAATCACAGAATGAACTG 58.920 34.615 0.00 0.00 41.93 3.16
606 616 3.469008 ACAGAATGAACTGTCCGTGAA 57.531 42.857 0.00 0.00 46.36 3.18
607 617 3.804036 ACAGAATGAACTGTCCGTGAAA 58.196 40.909 0.00 0.00 46.36 2.69
608 618 3.560068 ACAGAATGAACTGTCCGTGAAAC 59.440 43.478 0.00 0.00 46.36 2.78
609 619 3.809832 CAGAATGAACTGTCCGTGAAACT 59.190 43.478 0.00 0.00 39.69 2.66
610 620 4.988540 CAGAATGAACTGTCCGTGAAACTA 59.011 41.667 0.00 0.00 39.69 2.24
611 621 5.639506 CAGAATGAACTGTCCGTGAAACTAT 59.360 40.000 0.00 0.00 39.69 2.12
612 622 6.147821 CAGAATGAACTGTCCGTGAAACTATT 59.852 38.462 0.00 0.00 39.69 1.73
613 623 6.710744 AGAATGAACTGTCCGTGAAACTATTT 59.289 34.615 0.00 0.00 31.75 1.40
614 624 5.917541 TGAACTGTCCGTGAAACTATTTC 57.082 39.130 0.00 0.00 40.08 2.17
615 625 5.361427 TGAACTGTCCGTGAAACTATTTCA 58.639 37.500 0.00 0.00 46.68 2.69
622 632 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
623 633 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
624 634 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
625 635 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
626 636 0.739813 ACTATTTCACGCGGCTGACC 60.740 55.000 12.47 0.00 0.00 4.02
627 637 1.429148 CTATTTCACGCGGCTGACCC 61.429 60.000 12.47 0.00 0.00 4.46
638 648 4.514577 CTGACCCGTGGCGCCTAG 62.515 72.222 29.70 20.71 0.00 3.02
651 661 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
652 662 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
653 663 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
654 664 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
655 665 4.756458 GCTCTCAGGCGCTGCACT 62.756 66.667 7.64 0.00 0.00 4.40
656 666 2.888111 CTCTCAGGCGCTGCACTA 59.112 61.111 7.64 0.00 0.00 2.74
657 667 1.226916 CTCTCAGGCGCTGCACTAG 60.227 63.158 7.64 0.00 0.00 2.57
658 668 1.943116 CTCTCAGGCGCTGCACTAGT 61.943 60.000 7.64 0.00 0.00 2.57
659 669 1.808799 CTCAGGCGCTGCACTAGTG 60.809 63.158 18.93 18.93 39.95 2.74
669 679 3.566261 CACTAGTGCAACGCCTGG 58.434 61.111 10.54 0.00 45.86 4.45
670 680 2.034879 CACTAGTGCAACGCCTGGG 61.035 63.158 10.54 0.00 45.86 4.45
671 681 2.214216 ACTAGTGCAACGCCTGGGA 61.214 57.895 0.00 0.00 45.86 4.37
672 682 1.448540 CTAGTGCAACGCCTGGGAG 60.449 63.158 0.00 0.00 45.86 4.30
673 683 3.605749 TAGTGCAACGCCTGGGAGC 62.606 63.158 0.00 0.00 45.86 4.70
675 685 3.318384 TGCAACGCCTGGGAGCTA 61.318 61.111 0.00 0.00 0.00 3.32
676 686 2.512515 GCAACGCCTGGGAGCTAG 60.513 66.667 0.00 0.00 0.00 3.42
677 687 2.187946 CAACGCCTGGGAGCTAGG 59.812 66.667 0.00 0.00 38.39 3.02
682 692 4.232878 CCTGGGAGCTAGGCGCAG 62.233 72.222 10.83 10.09 43.51 5.18
701 711 3.050703 CACTAGTGCAACGCCTAGG 57.949 57.895 10.54 3.67 45.86 3.02
702 712 0.530744 CACTAGTGCAACGCCTAGGA 59.469 55.000 14.75 0.00 45.86 2.94
703 713 0.818296 ACTAGTGCAACGCCTAGGAG 59.182 55.000 14.75 12.99 45.86 3.69
704 714 0.528684 CTAGTGCAACGCCTAGGAGC 60.529 60.000 14.75 10.85 45.86 4.70
705 715 0.970937 TAGTGCAACGCCTAGGAGCT 60.971 55.000 14.75 3.79 45.86 4.09
706 716 0.970937 AGTGCAACGCCTAGGAGCTA 60.971 55.000 14.75 0.00 45.86 3.32
707 717 0.528684 GTGCAACGCCTAGGAGCTAG 60.529 60.000 14.75 3.92 34.16 3.42
723 733 3.204597 GCTAGGCGCTACACTGTATAG 57.795 52.381 7.64 0.00 35.14 1.31
724 734 2.553172 GCTAGGCGCTACACTGTATAGT 59.447 50.000 7.64 0.00 34.63 2.12
725 735 3.609644 GCTAGGCGCTACACTGTATAGTG 60.610 52.174 17.20 17.20 46.55 2.74
736 746 2.431057 ACTGTATAGTGTGGCACCTAGC 59.569 50.000 16.26 12.45 38.01 3.42
737 747 2.695666 CTGTATAGTGTGGCACCTAGCT 59.304 50.000 16.26 10.33 44.79 3.32
738 748 2.693591 TGTATAGTGTGGCACCTAGCTC 59.306 50.000 16.26 10.29 44.79 4.09
739 749 2.166907 ATAGTGTGGCACCTAGCTCT 57.833 50.000 16.26 6.50 44.79 4.09
740 750 1.475403 TAGTGTGGCACCTAGCTCTC 58.525 55.000 16.26 0.00 44.79 3.20
741 751 0.542938 AGTGTGGCACCTAGCTCTCA 60.543 55.000 16.26 0.00 44.79 3.27
742 752 0.108424 GTGTGGCACCTAGCTCTCAG 60.108 60.000 16.26 0.00 44.79 3.35
743 753 1.260538 TGTGGCACCTAGCTCTCAGG 61.261 60.000 16.26 0.00 44.79 3.86
744 754 2.362369 TGGCACCTAGCTCTCAGGC 61.362 63.158 0.60 0.00 44.79 4.85
745 755 2.105930 GCACCTAGCTCTCAGGCG 59.894 66.667 0.60 0.00 41.15 5.52
746 756 2.105930 CACCTAGCTCTCAGGCGC 59.894 66.667 0.00 0.00 36.57 6.53
747 757 2.043450 ACCTAGCTCTCAGGCGCT 60.043 61.111 7.64 0.00 36.57 5.92
748 758 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
749 759 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
750 760 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
751 761 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
753 763 3.117171 CTCTCAGGCGCTGCACAC 61.117 66.667 7.64 0.00 0.00 3.82
754 764 3.586461 CTCTCAGGCGCTGCACACT 62.586 63.158 7.64 0.00 0.00 3.55
755 765 3.420606 CTCAGGCGCTGCACACTG 61.421 66.667 7.64 4.89 0.00 3.66
756 766 3.871248 CTCAGGCGCTGCACACTGA 62.871 63.158 7.64 9.54 37.61 3.41
757 767 3.720193 CAGGCGCTGCACACTGAC 61.720 66.667 7.64 0.00 32.86 3.51
758 768 3.933722 AGGCGCTGCACACTGACT 61.934 61.111 7.64 0.00 0.00 3.41
759 769 2.974698 GGCGCTGCACACTGACTT 60.975 61.111 7.64 0.00 0.00 3.01
760 770 1.667830 GGCGCTGCACACTGACTTA 60.668 57.895 7.64 0.00 0.00 2.24
761 771 1.630244 GGCGCTGCACACTGACTTAG 61.630 60.000 7.64 0.00 0.00 2.18
762 772 0.946221 GCGCTGCACACTGACTTAGT 60.946 55.000 0.00 0.00 41.36 2.24
763 773 1.668919 GCGCTGCACACTGACTTAGTA 60.669 52.381 0.00 0.00 37.60 1.82
764 774 2.672714 CGCTGCACACTGACTTAGTAA 58.327 47.619 0.00 0.00 37.60 2.24
765 775 3.254060 CGCTGCACACTGACTTAGTAAT 58.746 45.455 0.00 0.00 37.60 1.89
766 776 3.679980 CGCTGCACACTGACTTAGTAATT 59.320 43.478 0.00 0.00 37.60 1.40
767 777 4.152402 CGCTGCACACTGACTTAGTAATTT 59.848 41.667 0.00 0.00 37.60 1.82
768 778 5.334105 CGCTGCACACTGACTTAGTAATTTT 60.334 40.000 0.00 0.00 37.60 1.82
769 779 6.080406 GCTGCACACTGACTTAGTAATTTTC 58.920 40.000 0.00 0.00 37.60 2.29
770 780 6.073003 GCTGCACACTGACTTAGTAATTTTCT 60.073 38.462 0.00 0.00 37.60 2.52
771 781 7.189693 TGCACACTGACTTAGTAATTTTCTG 57.810 36.000 0.00 0.00 37.60 3.02
772 782 6.989759 TGCACACTGACTTAGTAATTTTCTGA 59.010 34.615 0.00 0.00 37.60 3.27
773 783 7.661437 TGCACACTGACTTAGTAATTTTCTGAT 59.339 33.333 0.00 0.00 37.60 2.90
774 784 8.171840 GCACACTGACTTAGTAATTTTCTGATC 58.828 37.037 0.00 0.00 37.60 2.92
775 785 9.208022 CACACTGACTTAGTAATTTTCTGATCA 57.792 33.333 0.00 0.00 37.60 2.92
776 786 9.209175 ACACTGACTTAGTAATTTTCTGATCAC 57.791 33.333 0.00 0.00 37.60 3.06
777 787 9.208022 CACTGACTTAGTAATTTTCTGATCACA 57.792 33.333 0.00 0.00 37.60 3.58
778 788 9.209175 ACTGACTTAGTAATTTTCTGATCACAC 57.791 33.333 0.00 0.00 38.04 3.82
779 789 8.239681 TGACTTAGTAATTTTCTGATCACACG 57.760 34.615 0.00 0.00 0.00 4.49
780 790 7.330946 TGACTTAGTAATTTTCTGATCACACGG 59.669 37.037 0.00 0.00 0.00 4.94
781 791 6.594159 ACTTAGTAATTTTCTGATCACACGGG 59.406 38.462 0.00 0.00 0.00 5.28
782 792 4.906618 AGTAATTTTCTGATCACACGGGT 58.093 39.130 0.00 0.00 0.00 5.28
783 793 4.695455 AGTAATTTTCTGATCACACGGGTG 59.305 41.667 12.84 12.84 46.66 4.61
784 794 1.234821 TTTTCTGATCACACGGGTGC 58.765 50.000 14.50 0.00 44.87 5.01
785 795 0.948623 TTTCTGATCACACGGGTGCG 60.949 55.000 14.50 1.20 44.87 5.34
786 796 1.811645 TTCTGATCACACGGGTGCGA 61.812 55.000 14.50 3.83 44.87 5.10
787 797 2.048597 TGATCACACGGGTGCGAC 60.049 61.111 14.50 7.33 44.87 5.19
788 798 3.179265 GATCACACGGGTGCGACG 61.179 66.667 14.50 0.00 44.87 5.12
791 801 4.710695 CACACGGGTGCGACGCTA 62.711 66.667 22.08 4.55 38.37 4.26
792 802 4.415332 ACACGGGTGCGACGCTAG 62.415 66.667 22.08 11.56 34.00 3.42
793 803 4.415332 CACGGGTGCGACGCTAGT 62.415 66.667 22.08 12.20 34.00 2.57
794 804 4.112341 ACGGGTGCGACGCTAGTC 62.112 66.667 22.08 8.64 43.72 2.59
805 815 2.799371 GCTAGTCGTGTAGCGCCT 59.201 61.111 2.29 0.00 41.07 5.52
806 816 2.020131 GCTAGTCGTGTAGCGCCTA 58.980 57.895 2.29 0.00 41.07 3.93
807 817 0.592148 GCTAGTCGTGTAGCGCCTAT 59.408 55.000 2.29 0.00 41.07 2.57
808 818 1.399984 GCTAGTCGTGTAGCGCCTATC 60.400 57.143 2.29 0.00 41.07 2.08
809 819 2.144730 CTAGTCGTGTAGCGCCTATCT 58.855 52.381 2.29 0.00 41.07 1.98
810 820 0.663688 AGTCGTGTAGCGCCTATCTG 59.336 55.000 2.29 0.00 41.07 2.90
811 821 0.381089 GTCGTGTAGCGCCTATCTGT 59.619 55.000 2.29 0.00 41.07 3.41
812 822 0.380733 TCGTGTAGCGCCTATCTGTG 59.619 55.000 2.29 0.00 41.07 3.66
813 823 0.380733 CGTGTAGCGCCTATCTGTGA 59.619 55.000 2.29 0.00 0.00 3.58
814 824 1.598183 CGTGTAGCGCCTATCTGTGAG 60.598 57.143 2.29 0.00 0.00 3.51
815 825 1.032794 TGTAGCGCCTATCTGTGAGG 58.967 55.000 2.29 0.00 37.12 3.86
821 831 2.682893 CCTATCTGTGAGGCGTTGC 58.317 57.895 0.00 0.00 0.00 4.17
822 832 0.108186 CCTATCTGTGAGGCGTTGCA 60.108 55.000 0.00 0.00 0.00 4.08
823 833 1.002366 CTATCTGTGAGGCGTTGCAC 58.998 55.000 0.00 0.00 35.63 4.57
824 834 0.320050 TATCTGTGAGGCGTTGCACA 59.680 50.000 0.00 0.00 42.25 4.57
825 835 0.534877 ATCTGTGAGGCGTTGCACAA 60.535 50.000 0.00 0.00 43.65 3.33
826 836 0.534877 TCTGTGAGGCGTTGCACAAT 60.535 50.000 0.00 0.00 43.65 2.71
827 837 0.386352 CTGTGAGGCGTTGCACAATG 60.386 55.000 0.00 0.00 43.65 2.82
828 838 1.100463 TGTGAGGCGTTGCACAATGT 61.100 50.000 4.63 0.00 41.61 2.71
829 839 0.871722 GTGAGGCGTTGCACAATGTA 59.128 50.000 4.63 0.00 35.19 2.29
830 840 1.135972 GTGAGGCGTTGCACAATGTAG 60.136 52.381 4.63 0.00 35.19 2.74
831 841 1.156736 GAGGCGTTGCACAATGTAGT 58.843 50.000 4.63 0.00 0.00 2.73
832 842 0.874390 AGGCGTTGCACAATGTAGTG 59.126 50.000 4.63 0.00 42.37 2.74
833 843 0.591170 GGCGTTGCACAATGTAGTGT 59.409 50.000 4.63 0.00 41.52 3.55
839 849 1.501741 CACAATGTAGTGTGGCGCC 59.498 57.895 22.73 22.73 44.29 6.53
840 850 0.955428 CACAATGTAGTGTGGCGCCT 60.955 55.000 29.70 9.99 44.29 5.52
841 851 0.250727 ACAATGTAGTGTGGCGCCTT 60.251 50.000 29.70 13.03 0.00 4.35
842 852 0.447801 CAATGTAGTGTGGCGCCTTC 59.552 55.000 29.70 20.58 0.00 3.46
843 853 1.019278 AATGTAGTGTGGCGCCTTCG 61.019 55.000 29.70 0.00 39.07 3.79
844 854 2.048503 GTAGTGTGGCGCCTTCGT 60.049 61.111 29.70 12.53 38.14 3.85
845 855 2.048597 TAGTGTGGCGCCTTCGTG 60.049 61.111 29.70 0.00 38.14 4.35
846 856 2.863346 TAGTGTGGCGCCTTCGTGT 61.863 57.895 29.70 9.85 38.14 4.49
847 857 2.758770 TAGTGTGGCGCCTTCGTGTC 62.759 60.000 29.70 10.72 38.14 3.67
861 871 4.893601 TGTCGGGCGTCGCACAAA 62.894 61.111 21.18 3.54 39.05 2.83
862 872 3.641986 GTCGGGCGTCGCACAAAA 61.642 61.111 21.18 0.61 39.05 2.44
863 873 2.895865 TCGGGCGTCGCACAAAAA 60.896 55.556 21.18 0.00 39.05 1.94
864 874 2.426752 CGGGCGTCGCACAAAAAG 60.427 61.111 21.18 0.00 0.00 2.27
865 875 2.050442 GGGCGTCGCACAAAAAGG 60.050 61.111 20.50 0.00 0.00 3.11
866 876 2.719354 GGCGTCGCACAAAAAGGT 59.281 55.556 20.50 0.00 0.00 3.50
867 877 1.370051 GGCGTCGCACAAAAAGGTC 60.370 57.895 20.50 0.00 0.00 3.85
868 878 1.353804 GCGTCGCACAAAAAGGTCA 59.646 52.632 13.44 0.00 0.00 4.02
869 879 0.657368 GCGTCGCACAAAAAGGTCAG 60.657 55.000 13.44 0.00 0.00 3.51
870 880 0.657368 CGTCGCACAAAAAGGTCAGC 60.657 55.000 0.00 0.00 0.00 4.26
871 881 0.317854 GTCGCACAAAAAGGTCAGCC 60.318 55.000 0.00 0.00 0.00 4.85
872 882 1.370414 CGCACAAAAAGGTCAGCCG 60.370 57.895 0.00 0.00 40.50 5.52
873 883 1.661509 GCACAAAAAGGTCAGCCGC 60.662 57.895 0.00 0.00 40.50 6.53
874 884 1.370414 CACAAAAAGGTCAGCCGCG 60.370 57.895 0.00 0.00 40.50 6.46
875 885 1.822186 ACAAAAAGGTCAGCCGCGT 60.822 52.632 4.92 0.00 40.50 6.01
876 886 1.370414 CAAAAAGGTCAGCCGCGTG 60.370 57.895 4.92 0.00 40.50 5.34
877 887 1.525077 AAAAAGGTCAGCCGCGTGA 60.525 52.632 4.92 0.00 40.50 4.35
878 888 1.098712 AAAAAGGTCAGCCGCGTGAA 61.099 50.000 4.92 0.00 40.50 3.18
879 889 1.098712 AAAAGGTCAGCCGCGTGAAA 61.099 50.000 4.92 0.00 40.50 2.69
880 890 0.889186 AAAGGTCAGCCGCGTGAAAT 60.889 50.000 4.92 0.00 40.50 2.17
881 891 0.036765 AAGGTCAGCCGCGTGAAATA 60.037 50.000 4.92 0.00 40.50 1.40
882 892 0.460284 AGGTCAGCCGCGTGAAATAG 60.460 55.000 4.92 0.00 40.50 1.73
883 893 0.739813 GGTCAGCCGCGTGAAATAGT 60.740 55.000 4.92 0.00 0.00 2.12
884 894 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
885 895 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
886 896 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
887 897 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
900 910 8.786826 TGAAATAGTTTCACGGATAGTTCATT 57.213 30.769 1.24 0.00 44.21 2.57
901 911 8.879759 TGAAATAGTTTCACGGATAGTTCATTC 58.120 33.333 1.24 0.00 44.21 2.67
902 912 9.099454 GAAATAGTTTCACGGATAGTTCATTCT 57.901 33.333 0.00 0.00 39.45 2.40
903 913 8.425577 AATAGTTTCACGGATAGTTCATTCTG 57.574 34.615 0.00 0.00 0.00 3.02
904 914 5.794894 AGTTTCACGGATAGTTCATTCTGT 58.205 37.500 0.00 0.00 31.63 3.41
905 915 5.639506 AGTTTCACGGATAGTTCATTCTGTG 59.360 40.000 5.70 5.70 46.17 3.66
910 920 6.668541 ACGGATAGTTCATTCTGTGATTTG 57.331 37.500 0.00 0.00 36.54 2.32
911 921 6.406370 ACGGATAGTTCATTCTGTGATTTGA 58.594 36.000 0.00 0.00 36.54 2.69
912 922 7.050377 ACGGATAGTTCATTCTGTGATTTGAT 58.950 34.615 0.00 0.00 36.54 2.57
913 923 7.554118 ACGGATAGTTCATTCTGTGATTTGATT 59.446 33.333 0.00 0.00 36.54 2.57
914 924 8.400947 CGGATAGTTCATTCTGTGATTTGATTT 58.599 33.333 0.00 0.00 36.54 2.17
915 925 9.727627 GGATAGTTCATTCTGTGATTTGATTTC 57.272 33.333 0.00 0.00 36.54 2.17
916 926 9.430838 GATAGTTCATTCTGTGATTTGATTTCG 57.569 33.333 0.00 0.00 36.54 3.46
917 927 7.206981 AGTTCATTCTGTGATTTGATTTCGT 57.793 32.000 0.00 0.00 36.54 3.85
918 928 7.301054 AGTTCATTCTGTGATTTGATTTCGTC 58.699 34.615 0.00 0.00 36.54 4.20
919 929 7.173907 AGTTCATTCTGTGATTTGATTTCGTCT 59.826 33.333 0.00 0.00 36.54 4.18
920 930 8.443160 GTTCATTCTGTGATTTGATTTCGTCTA 58.557 33.333 0.00 0.00 36.54 2.59
921 931 8.722480 TCATTCTGTGATTTGATTTCGTCTAT 57.278 30.769 0.00 0.00 0.00 1.98
922 932 9.816354 TCATTCTGTGATTTGATTTCGTCTATA 57.184 29.630 0.00 0.00 0.00 1.31
924 934 8.648557 TTCTGTGATTTGATTTCGTCTATAGG 57.351 34.615 0.00 0.00 0.00 2.57
925 935 7.782049 TCTGTGATTTGATTTCGTCTATAGGT 58.218 34.615 0.00 0.00 0.00 3.08
926 936 8.258007 TCTGTGATTTGATTTCGTCTATAGGTT 58.742 33.333 0.00 0.00 0.00 3.50
927 937 9.529325 CTGTGATTTGATTTCGTCTATAGGTTA 57.471 33.333 0.00 0.00 0.00 2.85
928 938 9.878667 TGTGATTTGATTTCGTCTATAGGTTAA 57.121 29.630 0.00 0.00 0.00 2.01
958 968 0.896923 TTTGGCACCAGAATCATGGC 59.103 50.000 0.00 0.00 44.80 4.40
959 969 0.971959 TTGGCACCAGAATCATGGCC 60.972 55.000 0.00 0.00 44.80 5.36
960 970 2.484062 GGCACCAGAATCATGGCCG 61.484 63.158 0.00 0.00 44.80 6.13
961 971 1.451927 GCACCAGAATCATGGCCGA 60.452 57.895 0.00 0.00 44.80 5.54
962 972 1.031571 GCACCAGAATCATGGCCGAA 61.032 55.000 0.00 0.00 44.80 4.30
963 973 1.462616 CACCAGAATCATGGCCGAAA 58.537 50.000 0.00 0.00 44.80 3.46
964 974 1.818060 CACCAGAATCATGGCCGAAAA 59.182 47.619 0.00 0.00 44.80 2.29
965 975 2.094675 ACCAGAATCATGGCCGAAAAG 58.905 47.619 0.00 0.00 44.80 2.27
966 976 2.290896 ACCAGAATCATGGCCGAAAAGA 60.291 45.455 0.00 0.00 44.80 2.52
967 977 2.754552 CCAGAATCATGGCCGAAAAGAA 59.245 45.455 0.00 0.00 32.48 2.52
968 978 3.428045 CCAGAATCATGGCCGAAAAGAAC 60.428 47.826 0.00 0.00 32.48 3.01
969 979 3.441572 CAGAATCATGGCCGAAAAGAACT 59.558 43.478 0.00 0.00 0.00 3.01
970 980 3.441572 AGAATCATGGCCGAAAAGAACTG 59.558 43.478 0.00 0.00 0.00 3.16
971 981 1.533625 TCATGGCCGAAAAGAACTGG 58.466 50.000 0.00 0.00 0.00 4.00
972 982 0.109132 CATGGCCGAAAAGAACTGGC 60.109 55.000 0.00 0.00 46.82 4.85
974 984 2.962569 GCCGAAAAGAACTGGCCC 59.037 61.111 0.00 0.00 41.70 5.80
975 985 1.901464 GCCGAAAAGAACTGGCCCA 60.901 57.895 0.00 0.00 41.70 5.36
976 986 1.250840 GCCGAAAAGAACTGGCCCAT 61.251 55.000 0.00 0.00 41.70 4.00
977 987 1.953311 GCCGAAAAGAACTGGCCCATA 60.953 52.381 0.00 0.00 41.70 2.74
978 988 1.743394 CCGAAAAGAACTGGCCCATAC 59.257 52.381 0.00 0.00 0.00 2.39
979 989 2.432444 CGAAAAGAACTGGCCCATACA 58.568 47.619 0.00 0.00 0.00 2.29
980 990 2.161609 CGAAAAGAACTGGCCCATACAC 59.838 50.000 0.00 0.00 0.00 2.90
981 991 2.969821 AAAGAACTGGCCCATACACA 57.030 45.000 0.00 0.00 0.00 3.72
982 992 2.200373 AAGAACTGGCCCATACACAC 57.800 50.000 0.00 0.00 0.00 3.82
983 993 1.064003 AGAACTGGCCCATACACACA 58.936 50.000 0.00 0.00 0.00 3.72
984 994 1.165270 GAACTGGCCCATACACACAC 58.835 55.000 0.00 0.00 0.00 3.82
985 995 0.771127 AACTGGCCCATACACACACT 59.229 50.000 0.00 0.00 0.00 3.55
986 996 0.324943 ACTGGCCCATACACACACTC 59.675 55.000 0.00 0.00 0.00 3.51
987 997 0.392998 CTGGCCCATACACACACTCC 60.393 60.000 0.00 0.00 0.00 3.85
988 998 1.130678 TGGCCCATACACACACTCCA 61.131 55.000 0.00 0.00 0.00 3.86
989 999 0.037590 GGCCCATACACACACTCCAA 59.962 55.000 0.00 0.00 0.00 3.53
990 1000 1.546773 GGCCCATACACACACTCCAAA 60.547 52.381 0.00 0.00 0.00 3.28
991 1001 1.812571 GCCCATACACACACTCCAAAG 59.187 52.381 0.00 0.00 0.00 2.77
992 1002 2.436417 CCCATACACACACTCCAAAGG 58.564 52.381 0.00 0.00 0.00 3.11
993 1003 2.436417 CCATACACACACTCCAAAGGG 58.564 52.381 0.00 0.00 0.00 3.95
994 1004 2.039746 CCATACACACACTCCAAAGGGA 59.960 50.000 0.00 0.00 42.29 4.20
1004 1014 2.442236 TCCAAAGGGAGAATCATGGC 57.558 50.000 0.00 0.00 38.64 4.40
1005 1015 1.063717 TCCAAAGGGAGAATCATGGCC 60.064 52.381 0.00 0.00 38.64 5.36
1611 4287 1.219393 GCCCCTCTTCGAGAAGGTG 59.781 63.158 12.32 4.34 38.88 4.00
1750 4426 1.092345 GCTGAACTTCGAGGATGGCC 61.092 60.000 0.00 0.00 0.00 5.36
1893 4569 1.153745 CTGCTCAGAGTACGGCCAC 60.154 63.158 2.24 0.00 0.00 5.01
1907 4583 0.246635 GGCCACGAGAAGCAGTTCTA 59.753 55.000 0.00 0.00 43.50 2.10
2149 4840 1.427368 TGTGGTATTCCCCAAGCAGTT 59.573 47.619 0.00 0.00 35.92 3.16
2153 4844 3.054655 TGGTATTCCCCAAGCAGTTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2154 4845 2.808906 ATTCCCCAAGCAGTTACTCC 57.191 50.000 0.00 0.00 0.00 3.85
2155 4846 0.696501 TTCCCCAAGCAGTTACTCCC 59.303 55.000 0.00 0.00 0.00 4.30
2156 4847 0.178873 TCCCCAAGCAGTTACTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
2157 4848 0.253327 CCCCAAGCAGTTACTCCCTC 59.747 60.000 0.00 0.00 0.00 4.30
2158 4849 0.253327 CCCAAGCAGTTACTCCCTCC 59.747 60.000 0.00 0.00 0.00 4.30
2159 4850 0.108138 CCAAGCAGTTACTCCCTCCG 60.108 60.000 0.00 0.00 0.00 4.63
2160 4851 0.608640 CAAGCAGTTACTCCCTCCGT 59.391 55.000 0.00 0.00 0.00 4.69
2161 4852 1.002087 CAAGCAGTTACTCCCTCCGTT 59.998 52.381 0.00 0.00 0.00 4.44
2162 4853 0.896226 AGCAGTTACTCCCTCCGTTC 59.104 55.000 0.00 0.00 0.00 3.95
2163 4854 0.108281 GCAGTTACTCCCTCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
2164 4855 1.558233 CAGTTACTCCCTCCGTTCCT 58.442 55.000 0.00 0.00 0.00 3.36
2165 4856 1.477295 CAGTTACTCCCTCCGTTCCTC 59.523 57.143 0.00 0.00 0.00 3.71
2166 4857 1.358445 AGTTACTCCCTCCGTTCCTCT 59.642 52.381 0.00 0.00 0.00 3.69
2167 4858 2.579860 AGTTACTCCCTCCGTTCCTCTA 59.420 50.000 0.00 0.00 0.00 2.43
2168 4859 3.204831 AGTTACTCCCTCCGTTCCTCTAT 59.795 47.826 0.00 0.00 0.00 1.98
2169 4860 2.074729 ACTCCCTCCGTTCCTCTATG 57.925 55.000 0.00 0.00 0.00 2.23
2170 4861 1.288335 ACTCCCTCCGTTCCTCTATGT 59.712 52.381 0.00 0.00 0.00 2.29
2171 4862 2.512896 ACTCCCTCCGTTCCTCTATGTA 59.487 50.000 0.00 0.00 0.00 2.29
2172 4863 3.053095 ACTCCCTCCGTTCCTCTATGTAA 60.053 47.826 0.00 0.00 0.00 2.41
2173 4864 4.153411 CTCCCTCCGTTCCTCTATGTAAT 58.847 47.826 0.00 0.00 0.00 1.89
2174 4865 3.895656 TCCCTCCGTTCCTCTATGTAATG 59.104 47.826 0.00 0.00 0.00 1.90
2175 4866 3.555168 CCCTCCGTTCCTCTATGTAATGC 60.555 52.174 0.00 0.00 0.00 3.56
2176 4867 3.309388 CTCCGTTCCTCTATGTAATGCG 58.691 50.000 0.00 0.00 0.00 4.73
2177 4868 1.792949 CCGTTCCTCTATGTAATGCGC 59.207 52.381 0.00 0.00 0.00 6.09
2178 4869 2.469826 CGTTCCTCTATGTAATGCGCA 58.530 47.619 14.96 14.96 0.00 6.09
2179 4870 3.059884 CGTTCCTCTATGTAATGCGCAT 58.940 45.455 19.28 19.28 0.00 4.73
2180 4871 4.234574 CGTTCCTCTATGTAATGCGCATA 58.765 43.478 25.61 8.84 0.00 3.14
2181 4872 4.324669 CGTTCCTCTATGTAATGCGCATAG 59.675 45.833 25.61 16.95 44.19 2.23
2182 4873 4.456280 TCCTCTATGTAATGCGCATAGG 57.544 45.455 25.61 23.34 43.46 2.57
2183 4874 3.832490 TCCTCTATGTAATGCGCATAGGT 59.168 43.478 25.61 11.15 43.46 3.08
2184 4875 4.283467 TCCTCTATGTAATGCGCATAGGTT 59.717 41.667 25.61 11.59 43.46 3.50
2185 4876 4.997395 CCTCTATGTAATGCGCATAGGTTT 59.003 41.667 25.61 11.17 43.46 3.27
2186 4877 5.470098 CCTCTATGTAATGCGCATAGGTTTT 59.530 40.000 25.61 10.35 43.46 2.43
2187 4878 6.017109 CCTCTATGTAATGCGCATAGGTTTTT 60.017 38.462 25.61 9.53 43.46 1.94
2210 4901 8.459521 TTTTGGCATTATTTCGAAATGTAGTG 57.540 30.769 29.20 21.44 36.82 2.74
2211 4902 5.577835 TGGCATTATTTCGAAATGTAGTGC 58.422 37.500 29.20 27.32 36.82 4.40
2212 4903 4.670621 GGCATTATTTCGAAATGTAGTGCG 59.329 41.667 29.20 13.44 36.82 5.34
2213 4904 5.263185 GCATTATTTCGAAATGTAGTGCGT 58.737 37.500 29.20 6.84 36.82 5.24
2214 4905 6.415702 GCATTATTTCGAAATGTAGTGCGTA 58.584 36.000 29.20 6.85 36.82 4.42
2215 4906 7.069569 GCATTATTTCGAAATGTAGTGCGTAT 58.930 34.615 29.20 5.64 36.82 3.06
2216 4907 7.586300 GCATTATTTCGAAATGTAGTGCGTATT 59.414 33.333 29.20 5.45 36.82 1.89
2219 4910 5.630896 TTCGAAATGTAGTGCGTATTAGC 57.369 39.130 0.00 0.00 37.71 3.09
2220 4911 4.928601 TCGAAATGTAGTGCGTATTAGCT 58.071 39.130 0.00 0.00 38.13 3.32
2221 4912 6.063640 TCGAAATGTAGTGCGTATTAGCTA 57.936 37.500 0.00 0.00 38.13 3.32
2222 4913 5.911280 TCGAAATGTAGTGCGTATTAGCTAC 59.089 40.000 0.00 0.00 38.13 3.58
2223 4914 5.913514 CGAAATGTAGTGCGTATTAGCTACT 59.086 40.000 0.00 0.00 35.95 2.57
2224 4915 6.417044 CGAAATGTAGTGCGTATTAGCTACTT 59.583 38.462 0.00 0.00 35.95 2.24
2225 4916 7.043590 CGAAATGTAGTGCGTATTAGCTACTTT 60.044 37.037 0.00 0.00 35.95 2.66
2226 4917 7.464830 AATGTAGTGCGTATTAGCTACTTTG 57.535 36.000 0.00 0.00 35.95 2.77
2227 4918 5.345702 TGTAGTGCGTATTAGCTACTTTGG 58.654 41.667 0.00 0.00 35.95 3.28
2228 4919 3.793559 AGTGCGTATTAGCTACTTTGGG 58.206 45.455 0.00 0.00 38.13 4.12
2229 4920 2.287103 GTGCGTATTAGCTACTTTGGGC 59.713 50.000 0.00 0.00 38.13 5.36
2230 4921 2.169769 TGCGTATTAGCTACTTTGGGCT 59.830 45.455 0.00 0.00 41.92 5.19
2231 4922 2.801111 GCGTATTAGCTACTTTGGGCTC 59.199 50.000 0.00 0.00 39.65 4.70
2232 4923 3.492829 GCGTATTAGCTACTTTGGGCTCT 60.493 47.826 0.00 0.00 39.65 4.09
2233 4924 4.694339 CGTATTAGCTACTTTGGGCTCTT 58.306 43.478 0.00 0.00 39.65 2.85
2234 4925 5.116882 CGTATTAGCTACTTTGGGCTCTTT 58.883 41.667 0.00 0.00 39.65 2.52
2235 4926 5.585047 CGTATTAGCTACTTTGGGCTCTTTT 59.415 40.000 0.00 0.00 39.65 2.27
2236 4927 5.904362 ATTAGCTACTTTGGGCTCTTTTG 57.096 39.130 0.00 0.00 39.65 2.44
2237 4928 2.519013 AGCTACTTTGGGCTCTTTTGG 58.481 47.619 0.00 0.00 32.98 3.28
2238 4929 2.108250 AGCTACTTTGGGCTCTTTTGGA 59.892 45.455 0.00 0.00 32.98 3.53
2239 4930 2.229062 GCTACTTTGGGCTCTTTTGGAC 59.771 50.000 0.00 0.00 0.00 4.02
2240 4931 1.318576 ACTTTGGGCTCTTTTGGACG 58.681 50.000 0.00 0.00 0.00 4.79
2241 4932 1.133915 ACTTTGGGCTCTTTTGGACGA 60.134 47.619 0.00 0.00 0.00 4.20
2242 4933 1.953686 CTTTGGGCTCTTTTGGACGAA 59.046 47.619 0.00 0.00 0.00 3.85
2243 4934 2.060050 TTGGGCTCTTTTGGACGAAA 57.940 45.000 0.00 0.00 0.00 3.46
2262 4953 5.932303 ACGAAACTAAGAGCAATTCTAGCAA 59.068 36.000 0.00 0.00 34.14 3.91
2356 5047 1.153489 CACAGATGCAGACCCTCCG 60.153 63.158 0.00 0.00 0.00 4.63
2615 5309 1.279271 CTTGGGGGTCGATCTTCACTT 59.721 52.381 0.00 0.00 0.00 3.16
2704 5398 0.096976 CGCACCGAAATCATCCACAC 59.903 55.000 0.00 0.00 0.00 3.82
2778 5472 1.208293 GAGGCGACCATTCTCCTCTTT 59.792 52.381 3.83 0.00 46.52 2.52
2870 5565 1.133407 GATCTGTTCTCTTCGGCGAGT 59.867 52.381 10.46 0.00 32.83 4.18
2916 5611 0.389426 GGCGCGTACTTTTCTCTCCA 60.389 55.000 8.43 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.766007 CGATTTTGATTCTCCATACTGCG 58.234 43.478 0.00 0.00 0.00 5.18
1 2 4.035558 TGCGATTTTGATTCTCCATACTGC 59.964 41.667 0.00 0.00 0.00 4.40
2 3 5.739752 TGCGATTTTGATTCTCCATACTG 57.260 39.130 0.00 0.00 0.00 2.74
3 4 6.757897 TTTGCGATTTTGATTCTCCATACT 57.242 33.333 0.00 0.00 0.00 2.12
22 23 1.916697 GCAGAGCCGAGGTCTTTTGC 61.917 60.000 3.30 2.59 38.40 3.68
51 52 5.248248 TGTGATTCTGGGTTGATTCTAGACA 59.752 40.000 0.00 0.00 0.00 3.41
73 74 2.464865 GACGATTCTAGATTGCGCTGT 58.535 47.619 9.73 0.00 0.00 4.40
74 75 1.449789 CGACGATTCTAGATTGCGCTG 59.550 52.381 9.73 0.00 0.00 5.18
75 76 1.333931 TCGACGATTCTAGATTGCGCT 59.666 47.619 9.73 0.00 0.00 5.92
76 77 1.755161 TCGACGATTCTAGATTGCGC 58.245 50.000 0.00 0.00 0.00 6.09
77 78 3.180584 CCTTTCGACGATTCTAGATTGCG 59.819 47.826 0.00 0.39 0.00 4.85
78 79 3.060205 GCCTTTCGACGATTCTAGATTGC 60.060 47.826 0.00 0.00 0.00 3.56
79 80 3.180584 CGCCTTTCGACGATTCTAGATTG 59.819 47.826 0.00 0.00 41.67 2.67
80 81 3.066342 TCGCCTTTCGACGATTCTAGATT 59.934 43.478 0.00 0.00 43.16 2.40
81 82 2.617308 TCGCCTTTCGACGATTCTAGAT 59.383 45.455 0.00 0.00 43.16 1.98
104 105 2.845659 TCCTTTGAGGGATTGCCTAGA 58.154 47.619 0.00 0.00 35.59 2.43
109 110 4.541973 ACATTTTCCTTTGAGGGATTGC 57.458 40.909 0.00 0.00 35.59 3.56
116 117 7.518731 TGAAAACGAAACATTTTCCTTTGAG 57.481 32.000 7.53 0.00 42.77 3.02
128 129 3.065648 GGGTACTTGCTGAAAACGAAACA 59.934 43.478 0.00 0.00 0.00 2.83
129 130 3.549423 GGGGTACTTGCTGAAAACGAAAC 60.549 47.826 0.00 0.00 0.00 2.78
133 134 1.892209 AGGGGTACTTGCTGAAAACG 58.108 50.000 0.00 0.00 0.00 3.60
162 163 6.035220 CGAGTGGCATTTACGTTCTAAATACA 59.965 38.462 0.00 0.00 0.00 2.29
189 190 2.636412 GGGCCTTTTTCGGTCTGGC 61.636 63.158 0.84 0.00 42.56 4.85
190 191 0.825840 TTGGGCCTTTTTCGGTCTGG 60.826 55.000 4.53 0.00 0.00 3.86
204 205 1.982073 CTGGATCGAGCGTTTTGGGC 61.982 60.000 0.00 0.00 0.00 5.36
217 218 0.107945 AACGCAAGCCTCTCTGGATC 60.108 55.000 0.00 0.00 45.62 3.36
224 225 0.669625 GGTTACGAACGCAAGCCTCT 60.670 55.000 0.00 0.00 45.62 3.69
272 273 8.466086 AGTGCTTAATAATGCAACTTAAAAGC 57.534 30.769 16.26 16.26 41.10 3.51
312 313 8.341903 GTTTAACATTGCAATTTAAAAGCAGGT 58.658 29.630 24.74 14.71 39.72 4.00
315 316 8.887717 AGTGTTTAACATTGCAATTTAAAAGCA 58.112 25.926 24.74 20.12 36.32 3.91
512 522 1.815421 CCCGGAGAATCAACCGCTG 60.815 63.158 0.73 3.77 46.59 5.18
516 526 0.181350 ATCTGCCCGGAGAATCAACC 59.819 55.000 0.73 0.00 36.25 3.77
554 564 9.834628 GATTTCGTTTATAGGTCAAATTTGTCA 57.165 29.630 17.47 0.00 0.00 3.58
555 565 9.834628 TGATTTCGTTTATAGGTCAAATTTGTC 57.165 29.630 17.47 12.07 0.00 3.18
561 571 9.834628 GTGATTTGATTTCGTTTATAGGTCAAA 57.165 29.630 0.00 0.00 38.14 2.69
562 572 9.004717 TGTGATTTGATTTCGTTTATAGGTCAA 57.995 29.630 0.00 0.00 0.00 3.18
563 573 8.554835 TGTGATTTGATTTCGTTTATAGGTCA 57.445 30.769 0.00 0.00 0.00 4.02
564 574 8.879759 TCTGTGATTTGATTTCGTTTATAGGTC 58.120 33.333 0.00 0.00 0.00 3.85
565 575 8.786826 TCTGTGATTTGATTTCGTTTATAGGT 57.213 30.769 0.00 0.00 0.00 3.08
570 580 9.393249 GTTCATTCTGTGATTTGATTTCGTTTA 57.607 29.630 0.00 0.00 36.54 2.01
571 581 8.137437 AGTTCATTCTGTGATTTGATTTCGTTT 58.863 29.630 0.00 0.00 36.54 3.60
572 582 7.592533 CAGTTCATTCTGTGATTTGATTTCGTT 59.407 33.333 0.00 0.00 36.54 3.85
573 583 7.080099 CAGTTCATTCTGTGATTTGATTTCGT 58.920 34.615 0.00 0.00 36.54 3.85
574 584 7.080099 ACAGTTCATTCTGTGATTTGATTTCG 58.920 34.615 0.00 0.00 45.40 3.46
575 585 7.540055 GGACAGTTCATTCTGTGATTTGATTTC 59.460 37.037 4.06 0.00 46.81 2.17
576 586 7.373493 GGACAGTTCATTCTGTGATTTGATTT 58.627 34.615 4.06 0.00 46.81 2.17
577 587 6.348786 CGGACAGTTCATTCTGTGATTTGATT 60.349 38.462 4.06 0.00 46.81 2.57
578 588 5.122869 CGGACAGTTCATTCTGTGATTTGAT 59.877 40.000 4.06 0.00 46.81 2.57
579 589 4.452114 CGGACAGTTCATTCTGTGATTTGA 59.548 41.667 4.06 0.00 46.81 2.69
580 590 4.214119 ACGGACAGTTCATTCTGTGATTTG 59.786 41.667 4.06 0.00 46.81 2.32
581 591 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
582 592 4.008074 ACGGACAGTTCATTCTGTGATT 57.992 40.909 4.06 0.00 46.81 2.57
583 593 3.685139 ACGGACAGTTCATTCTGTGAT 57.315 42.857 4.06 0.00 46.81 3.06
585 595 2.754472 TCACGGACAGTTCATTCTGTG 58.246 47.619 4.06 4.48 46.81 3.66
587 597 3.809832 AGTTTCACGGACAGTTCATTCTG 59.190 43.478 0.00 0.00 40.80 3.02
588 598 4.073293 AGTTTCACGGACAGTTCATTCT 57.927 40.909 0.00 0.00 0.00 2.40
589 599 6.481954 AATAGTTTCACGGACAGTTCATTC 57.518 37.500 0.00 0.00 0.00 2.67
590 600 6.485313 TGAAATAGTTTCACGGACAGTTCATT 59.515 34.615 1.24 0.00 44.21 2.57
591 601 5.995282 TGAAATAGTTTCACGGACAGTTCAT 59.005 36.000 1.24 0.00 44.21 2.57
592 602 5.361427 TGAAATAGTTTCACGGACAGTTCA 58.639 37.500 1.24 0.00 44.21 3.18
593 603 5.917541 TGAAATAGTTTCACGGACAGTTC 57.082 39.130 1.24 0.00 44.21 3.01
603 613 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
604 614 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
605 615 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
606 616 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
607 617 0.739813 GGTCAGCCGCGTGAAATAGT 60.740 55.000 4.92 0.00 0.00 2.12
608 618 1.429148 GGGTCAGCCGCGTGAAATAG 61.429 60.000 4.92 0.00 34.97 1.73
609 619 1.448893 GGGTCAGCCGCGTGAAATA 60.449 57.895 4.92 0.00 34.97 1.40
610 620 2.746277 GGGTCAGCCGCGTGAAAT 60.746 61.111 4.92 0.00 34.97 2.17
621 631 4.514577 CTAGGCGCCACGGGTCAG 62.515 72.222 31.54 9.46 0.00 3.51
626 636 4.577246 GAGAGCTAGGCGCCACGG 62.577 72.222 31.54 18.60 40.39 4.94
627 637 3.764810 CTGAGAGCTAGGCGCCACG 62.765 68.421 31.54 19.97 40.39 4.94
628 638 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
629 639 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
638 648 3.362399 TAGTGCAGCGCCTGAGAGC 62.362 63.158 2.29 0.00 39.42 4.09
639 649 1.226916 CTAGTGCAGCGCCTGAGAG 60.227 63.158 2.29 0.00 32.44 3.20
640 650 1.979155 ACTAGTGCAGCGCCTGAGA 60.979 57.895 2.29 0.00 32.44 3.27
641 651 1.808799 CACTAGTGCAGCGCCTGAG 60.809 63.158 10.54 0.34 32.44 3.35
642 652 2.262603 CACTAGTGCAGCGCCTGA 59.737 61.111 10.54 0.00 32.44 3.86
652 662 2.034879 CCCAGGCGTTGCACTAGTG 61.035 63.158 18.93 18.93 0.00 2.74
653 663 2.172483 CTCCCAGGCGTTGCACTAGT 62.172 60.000 0.00 0.00 0.00 2.57
654 664 1.448540 CTCCCAGGCGTTGCACTAG 60.449 63.158 0.00 0.00 0.00 2.57
655 665 2.662596 CTCCCAGGCGTTGCACTA 59.337 61.111 0.00 0.00 0.00 2.74
657 667 3.605749 TAGCTCCCAGGCGTTGCAC 62.606 63.158 0.00 0.00 37.29 4.57
658 668 3.315142 CTAGCTCCCAGGCGTTGCA 62.315 63.158 0.00 0.00 37.29 4.08
659 669 2.512515 CTAGCTCCCAGGCGTTGC 60.513 66.667 0.00 0.00 37.29 4.17
660 670 2.187946 CCTAGCTCCCAGGCGTTG 59.812 66.667 0.00 0.00 37.29 4.10
673 683 4.409342 CACTAGTGCTGCGCCTAG 57.591 61.111 10.54 18.88 36.35 3.02
683 693 0.530744 TCCTAGGCGTTGCACTAGTG 59.469 55.000 18.93 18.93 35.93 2.74
684 694 0.818296 CTCCTAGGCGTTGCACTAGT 59.182 55.000 2.96 0.00 35.93 2.57
685 695 0.528684 GCTCCTAGGCGTTGCACTAG 60.529 60.000 2.96 2.78 37.12 2.57
686 696 0.970937 AGCTCCTAGGCGTTGCACTA 60.971 55.000 2.96 0.00 37.29 2.74
687 697 0.970937 TAGCTCCTAGGCGTTGCACT 60.971 55.000 2.96 0.00 37.29 4.40
688 698 0.528684 CTAGCTCCTAGGCGTTGCAC 60.529 60.000 2.96 0.00 37.29 4.57
689 699 1.676678 CCTAGCTCCTAGGCGTTGCA 61.677 60.000 2.96 0.00 45.64 4.08
690 700 1.068250 CCTAGCTCCTAGGCGTTGC 59.932 63.158 2.96 5.87 45.64 4.17
701 711 5.572865 ACTATACAGTGTAGCGCCTAGCTC 61.573 50.000 2.29 0.00 43.12 4.09
702 712 3.748027 ACTATACAGTGTAGCGCCTAGCT 60.748 47.826 2.29 0.00 46.39 3.32
703 713 2.553172 ACTATACAGTGTAGCGCCTAGC 59.447 50.000 2.29 0.00 38.99 3.42
704 714 4.148563 CACTATACAGTGTAGCGCCTAG 57.851 50.000 2.29 7.59 46.03 3.02
714 724 3.738281 GCTAGGTGCCACACTATACAGTG 60.738 52.174 0.00 0.00 45.85 3.66
715 725 2.431057 GCTAGGTGCCACACTATACAGT 59.569 50.000 0.00 0.00 34.40 3.55
716 726 2.695666 AGCTAGGTGCCACACTATACAG 59.304 50.000 0.00 0.00 44.23 2.74
717 727 2.693591 GAGCTAGGTGCCACACTATACA 59.306 50.000 0.00 0.00 44.23 2.29
718 728 2.959707 AGAGCTAGGTGCCACACTATAC 59.040 50.000 0.00 0.00 44.23 1.47
719 729 3.223435 GAGAGCTAGGTGCCACACTATA 58.777 50.000 0.00 0.00 44.23 1.31
720 730 2.035632 GAGAGCTAGGTGCCACACTAT 58.964 52.381 0.00 0.00 44.23 2.12
721 731 1.272480 TGAGAGCTAGGTGCCACACTA 60.272 52.381 0.00 0.00 44.23 2.74
722 732 0.542938 TGAGAGCTAGGTGCCACACT 60.543 55.000 0.00 0.00 44.23 3.55
723 733 0.108424 CTGAGAGCTAGGTGCCACAC 60.108 60.000 0.00 0.00 44.23 3.82
724 734 1.260538 CCTGAGAGCTAGGTGCCACA 61.261 60.000 0.00 0.00 44.23 4.17
725 735 1.519719 CCTGAGAGCTAGGTGCCAC 59.480 63.158 0.00 0.00 44.23 5.01
726 736 2.362369 GCCTGAGAGCTAGGTGCCA 61.362 63.158 0.00 0.00 44.23 4.92
727 737 2.503546 GCCTGAGAGCTAGGTGCC 59.496 66.667 0.00 0.00 44.23 5.01
728 738 2.105930 CGCCTGAGAGCTAGGTGC 59.894 66.667 0.00 0.00 38.81 5.01
729 739 2.105930 GCGCCTGAGAGCTAGGTG 59.894 66.667 9.81 9.81 46.21 4.00
736 746 3.117171 GTGTGCAGCGCCTGAGAG 61.117 66.667 2.29 0.00 32.44 3.20
737 747 3.619767 AGTGTGCAGCGCCTGAGA 61.620 61.111 2.29 0.00 32.44 3.27
738 748 3.420606 CAGTGTGCAGCGCCTGAG 61.421 66.667 15.59 0.00 32.44 3.35
739 749 3.927548 TCAGTGTGCAGCGCCTGA 61.928 61.111 18.04 18.04 32.44 3.86
740 750 3.720193 GTCAGTGTGCAGCGCCTG 61.720 66.667 2.29 14.85 34.12 4.85
741 751 2.099652 TAAGTCAGTGTGCAGCGCCT 62.100 55.000 2.29 0.00 0.00 5.52
742 752 1.630244 CTAAGTCAGTGTGCAGCGCC 61.630 60.000 2.29 0.00 0.00 6.53
743 753 0.946221 ACTAAGTCAGTGTGCAGCGC 60.946 55.000 0.00 0.00 35.62 5.92
744 754 2.347697 TACTAAGTCAGTGTGCAGCG 57.652 50.000 0.00 0.00 38.24 5.18
745 755 5.613358 AAATTACTAAGTCAGTGTGCAGC 57.387 39.130 0.00 0.00 38.24 5.25
746 756 7.171508 TCAGAAAATTACTAAGTCAGTGTGCAG 59.828 37.037 0.00 0.00 38.24 4.41
747 757 6.989759 TCAGAAAATTACTAAGTCAGTGTGCA 59.010 34.615 0.00 0.00 38.24 4.57
748 758 7.421530 TCAGAAAATTACTAAGTCAGTGTGC 57.578 36.000 0.00 0.00 38.24 4.57
749 759 9.208022 TGATCAGAAAATTACTAAGTCAGTGTG 57.792 33.333 0.00 0.00 38.24 3.82
750 760 9.209175 GTGATCAGAAAATTACTAAGTCAGTGT 57.791 33.333 0.00 0.00 38.24 3.55
751 761 9.208022 TGTGATCAGAAAATTACTAAGTCAGTG 57.792 33.333 0.00 0.00 38.24 3.66
752 762 9.209175 GTGTGATCAGAAAATTACTAAGTCAGT 57.791 33.333 0.00 0.00 41.62 3.41
753 763 8.376203 CGTGTGATCAGAAAATTACTAAGTCAG 58.624 37.037 0.00 0.00 0.00 3.51
754 764 7.330946 CCGTGTGATCAGAAAATTACTAAGTCA 59.669 37.037 0.00 0.00 0.00 3.41
755 765 7.201530 CCCGTGTGATCAGAAAATTACTAAGTC 60.202 40.741 0.00 0.00 0.00 3.01
756 766 6.594159 CCCGTGTGATCAGAAAATTACTAAGT 59.406 38.462 0.00 0.00 0.00 2.24
757 767 6.594159 ACCCGTGTGATCAGAAAATTACTAAG 59.406 38.462 0.00 0.00 0.00 2.18
758 768 6.370442 CACCCGTGTGATCAGAAAATTACTAA 59.630 38.462 0.00 0.00 45.76 2.24
759 769 5.872617 CACCCGTGTGATCAGAAAATTACTA 59.127 40.000 0.00 0.00 45.76 1.82
760 770 4.695455 CACCCGTGTGATCAGAAAATTACT 59.305 41.667 0.00 0.00 45.76 2.24
761 771 4.671766 GCACCCGTGTGATCAGAAAATTAC 60.672 45.833 0.90 0.00 45.76 1.89
762 772 3.438781 GCACCCGTGTGATCAGAAAATTA 59.561 43.478 0.90 0.00 45.76 1.40
763 773 2.228822 GCACCCGTGTGATCAGAAAATT 59.771 45.455 0.90 0.00 45.76 1.82
764 774 1.812571 GCACCCGTGTGATCAGAAAAT 59.187 47.619 0.90 0.00 45.76 1.82
765 775 1.234821 GCACCCGTGTGATCAGAAAA 58.765 50.000 0.90 0.00 45.76 2.29
766 776 0.948623 CGCACCCGTGTGATCAGAAA 60.949 55.000 0.90 0.00 45.76 2.52
767 777 1.374125 CGCACCCGTGTGATCAGAA 60.374 57.895 0.90 0.00 45.76 3.02
768 778 2.261361 CGCACCCGTGTGATCAGA 59.739 61.111 0.90 0.00 45.76 3.27
769 779 2.261361 TCGCACCCGTGTGATCAG 59.739 61.111 0.90 0.00 45.76 2.90
774 784 4.710695 TAGCGTCGCACCCGTGTG 62.711 66.667 21.09 1.90 45.65 3.82
775 785 4.415332 CTAGCGTCGCACCCGTGT 62.415 66.667 21.09 0.00 35.54 4.49
776 786 4.415332 ACTAGCGTCGCACCCGTG 62.415 66.667 21.09 4.94 35.54 4.94
777 787 4.112341 GACTAGCGTCGCACCCGT 62.112 66.667 21.09 10.04 35.54 5.28
795 805 1.269309 CCTCACAGATAGGCGCTACAC 60.269 57.143 7.64 0.00 0.00 2.90
796 806 1.032794 CCTCACAGATAGGCGCTACA 58.967 55.000 7.64 0.00 0.00 2.74
797 807 3.875838 CCTCACAGATAGGCGCTAC 57.124 57.895 7.64 0.00 0.00 3.58
803 813 0.108186 TGCAACGCCTCACAGATAGG 60.108 55.000 0.00 0.00 37.17 2.57
804 814 1.002366 GTGCAACGCCTCACAGATAG 58.998 55.000 0.00 0.00 33.63 2.08
805 815 0.320050 TGTGCAACGCCTCACAGATA 59.680 50.000 0.00 0.00 42.39 1.98
806 816 0.534877 TTGTGCAACGCCTCACAGAT 60.535 50.000 0.00 0.00 43.15 2.90
807 817 0.534877 ATTGTGCAACGCCTCACAGA 60.535 50.000 0.00 0.00 43.15 3.41
808 818 0.386352 CATTGTGCAACGCCTCACAG 60.386 55.000 0.00 0.00 43.15 3.66
809 819 1.100463 ACATTGTGCAACGCCTCACA 61.100 50.000 0.00 0.86 42.39 3.58
810 820 0.871722 TACATTGTGCAACGCCTCAC 59.128 50.000 0.00 0.00 42.39 3.51
811 821 1.155889 CTACATTGTGCAACGCCTCA 58.844 50.000 0.00 0.00 42.39 3.86
812 822 1.135972 CACTACATTGTGCAACGCCTC 60.136 52.381 0.00 0.00 42.39 4.70
813 823 0.874390 CACTACATTGTGCAACGCCT 59.126 50.000 0.00 0.00 42.39 5.52
814 824 0.591170 ACACTACATTGTGCAACGCC 59.409 50.000 0.00 0.00 42.39 5.68
815 825 1.662876 CCACACTACATTGTGCAACGC 60.663 52.381 0.00 0.00 44.79 4.84
816 826 1.662876 GCCACACTACATTGTGCAACG 60.663 52.381 0.00 0.00 44.79 4.10
817 827 1.662876 CGCCACACTACATTGTGCAAC 60.663 52.381 0.00 0.00 44.79 4.17
818 828 0.590682 CGCCACACTACATTGTGCAA 59.409 50.000 0.00 0.00 44.79 4.08
819 829 1.851021 GCGCCACACTACATTGTGCA 61.851 55.000 0.00 0.00 44.79 4.57
820 830 1.154225 GCGCCACACTACATTGTGC 60.154 57.895 0.00 0.00 44.79 4.57
821 831 0.955428 AGGCGCCACACTACATTGTG 60.955 55.000 31.54 0.00 45.57 3.33
822 832 0.250727 AAGGCGCCACACTACATTGT 60.251 50.000 31.54 0.00 0.00 2.71
823 833 0.447801 GAAGGCGCCACACTACATTG 59.552 55.000 31.54 0.00 0.00 2.82
824 834 1.019278 CGAAGGCGCCACACTACATT 61.019 55.000 31.54 11.63 0.00 2.71
825 835 1.447838 CGAAGGCGCCACACTACAT 60.448 57.895 31.54 0.76 0.00 2.29
826 836 2.048597 CGAAGGCGCCACACTACA 60.049 61.111 31.54 0.00 0.00 2.74
827 837 2.048503 ACGAAGGCGCCACACTAC 60.049 61.111 31.54 11.50 42.48 2.73
828 838 2.048597 CACGAAGGCGCCACACTA 60.049 61.111 31.54 0.00 42.48 2.74
829 839 4.235762 ACACGAAGGCGCCACACT 62.236 61.111 31.54 9.96 42.48 3.55
830 840 3.712881 GACACGAAGGCGCCACAC 61.713 66.667 31.54 17.81 42.48 3.82
844 854 4.893601 TTTGTGCGACGCCCGACA 62.894 61.111 18.69 12.47 41.76 4.35
845 855 3.170810 TTTTTGTGCGACGCCCGAC 62.171 57.895 18.69 9.69 41.76 4.79
846 856 2.887889 CTTTTTGTGCGACGCCCGA 61.888 57.895 18.69 1.87 41.76 5.14
847 857 2.426752 CTTTTTGTGCGACGCCCG 60.427 61.111 18.69 0.00 42.21 6.13
848 858 2.050442 CCTTTTTGTGCGACGCCC 60.050 61.111 18.69 6.32 0.00 6.13
849 859 1.370051 GACCTTTTTGTGCGACGCC 60.370 57.895 18.69 9.37 0.00 5.68
850 860 0.657368 CTGACCTTTTTGTGCGACGC 60.657 55.000 14.19 14.19 0.00 5.19
851 861 0.657368 GCTGACCTTTTTGTGCGACG 60.657 55.000 0.00 0.00 0.00 5.12
852 862 0.317854 GGCTGACCTTTTTGTGCGAC 60.318 55.000 0.00 0.00 0.00 5.19
853 863 1.781025 CGGCTGACCTTTTTGTGCGA 61.781 55.000 0.00 0.00 0.00 5.10
854 864 1.370414 CGGCTGACCTTTTTGTGCG 60.370 57.895 0.00 0.00 0.00 5.34
855 865 1.661509 GCGGCTGACCTTTTTGTGC 60.662 57.895 0.00 0.00 0.00 4.57
856 866 1.370414 CGCGGCTGACCTTTTTGTG 60.370 57.895 0.00 0.00 0.00 3.33
857 867 1.822186 ACGCGGCTGACCTTTTTGT 60.822 52.632 12.47 0.00 0.00 2.83
858 868 1.370414 CACGCGGCTGACCTTTTTG 60.370 57.895 12.47 0.00 0.00 2.44
859 869 1.098712 TTCACGCGGCTGACCTTTTT 61.099 50.000 12.47 0.00 0.00 1.94
860 870 1.098712 TTTCACGCGGCTGACCTTTT 61.099 50.000 12.47 0.00 0.00 2.27
861 871 0.889186 ATTTCACGCGGCTGACCTTT 60.889 50.000 12.47 0.00 0.00 3.11
862 872 0.036765 TATTTCACGCGGCTGACCTT 60.037 50.000 12.47 0.00 0.00 3.50
863 873 0.460284 CTATTTCACGCGGCTGACCT 60.460 55.000 12.47 0.00 0.00 3.85
864 874 0.739813 ACTATTTCACGCGGCTGACC 60.740 55.000 12.47 0.00 0.00 4.02
865 875 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
866 876 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
867 877 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
868 878 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
875 885 8.786826 AATGAACTATCCGTGAAACTATTTCA 57.213 30.769 0.00 0.00 46.68 2.69
876 886 9.099454 AGAATGAACTATCCGTGAAACTATTTC 57.901 33.333 0.00 0.00 40.08 2.17
877 887 8.883731 CAGAATGAACTATCCGTGAAACTATTT 58.116 33.333 0.00 0.00 39.69 1.40
878 888 8.041323 ACAGAATGAACTATCCGTGAAACTATT 58.959 33.333 0.00 0.00 39.69 1.73
879 889 7.492669 CACAGAATGAACTATCCGTGAAACTAT 59.507 37.037 0.00 0.00 39.69 2.12
880 890 6.811665 CACAGAATGAACTATCCGTGAAACTA 59.188 38.462 0.00 0.00 39.69 2.24
881 891 5.639506 CACAGAATGAACTATCCGTGAAACT 59.360 40.000 0.00 0.00 39.69 2.66
882 892 5.637810 TCACAGAATGAACTATCCGTGAAAC 59.362 40.000 0.00 0.00 39.69 2.78
883 893 5.789521 TCACAGAATGAACTATCCGTGAAA 58.210 37.500 0.00 0.00 39.69 2.69
884 894 5.400066 TCACAGAATGAACTATCCGTGAA 57.600 39.130 0.00 0.00 39.69 3.18
885 895 5.598416 ATCACAGAATGAACTATCCGTGA 57.402 39.130 0.00 0.00 41.93 4.35
886 896 6.313658 TCAAATCACAGAATGAACTATCCGTG 59.686 38.462 0.00 0.00 41.93 4.94
887 897 6.406370 TCAAATCACAGAATGAACTATCCGT 58.594 36.000 0.00 0.00 41.93 4.69
888 898 6.908870 TCAAATCACAGAATGAACTATCCG 57.091 37.500 0.00 0.00 41.93 4.18
889 899 9.727627 GAAATCAAATCACAGAATGAACTATCC 57.272 33.333 0.00 0.00 41.93 2.59
890 900 9.430838 CGAAATCAAATCACAGAATGAACTATC 57.569 33.333 0.00 0.00 41.93 2.08
891 901 8.950210 ACGAAATCAAATCACAGAATGAACTAT 58.050 29.630 0.00 0.00 41.93 2.12
892 902 8.322906 ACGAAATCAAATCACAGAATGAACTA 57.677 30.769 0.00 0.00 41.93 2.24
893 903 7.173907 AGACGAAATCAAATCACAGAATGAACT 59.826 33.333 0.00 0.00 41.93 3.01
894 904 7.301054 AGACGAAATCAAATCACAGAATGAAC 58.699 34.615 0.00 0.00 41.93 3.18
895 905 7.439157 AGACGAAATCAAATCACAGAATGAA 57.561 32.000 0.00 0.00 41.93 2.57
896 906 8.722480 ATAGACGAAATCAAATCACAGAATGA 57.278 30.769 0.00 0.00 43.13 2.57
898 908 9.265901 CCTATAGACGAAATCAAATCACAGAAT 57.734 33.333 0.00 0.00 0.00 2.40
899 909 8.258007 ACCTATAGACGAAATCAAATCACAGAA 58.742 33.333 0.00 0.00 0.00 3.02
900 910 7.782049 ACCTATAGACGAAATCAAATCACAGA 58.218 34.615 0.00 0.00 0.00 3.41
901 911 8.425577 AACCTATAGACGAAATCAAATCACAG 57.574 34.615 0.00 0.00 0.00 3.66
902 912 9.878667 TTAACCTATAGACGAAATCAAATCACA 57.121 29.630 0.00 0.00 0.00 3.58
920 930 8.998377 GTGCCAAATTTGACAAATTTAACCTAT 58.002 29.630 29.34 11.02 46.34 2.57
921 931 7.442666 GGTGCCAAATTTGACAAATTTAACCTA 59.557 33.333 30.64 19.44 46.34 3.08
922 932 6.262049 GGTGCCAAATTTGACAAATTTAACCT 59.738 34.615 30.64 16.86 46.34 3.50
923 933 6.038714 TGGTGCCAAATTTGACAAATTTAACC 59.961 34.615 30.90 30.90 46.34 2.85
924 934 7.011857 TCTGGTGCCAAATTTGACAAATTTAAC 59.988 33.333 29.34 25.49 46.34 2.01
925 935 7.050377 TCTGGTGCCAAATTTGACAAATTTAA 58.950 30.769 29.34 18.97 46.34 1.52
926 936 6.586344 TCTGGTGCCAAATTTGACAAATTTA 58.414 32.000 29.34 17.06 46.34 1.40
928 938 5.033589 TCTGGTGCCAAATTTGACAAATT 57.966 34.783 19.86 18.41 42.62 1.82
929 939 4.686191 TCTGGTGCCAAATTTGACAAAT 57.314 36.364 19.86 7.62 0.00 2.32
930 940 4.478206 TTCTGGTGCCAAATTTGACAAA 57.522 36.364 19.86 2.48 0.00 2.83
931 941 4.100653 TGATTCTGGTGCCAAATTTGACAA 59.899 37.500 19.86 3.46 0.00 3.18
932 942 3.640498 TGATTCTGGTGCCAAATTTGACA 59.360 39.130 19.86 11.67 0.00 3.58
933 943 4.255833 TGATTCTGGTGCCAAATTTGAC 57.744 40.909 19.86 8.78 0.00 3.18
934 944 4.322877 CCATGATTCTGGTGCCAAATTTGA 60.323 41.667 19.86 0.00 0.00 2.69
935 945 3.936453 CCATGATTCTGGTGCCAAATTTG 59.064 43.478 11.40 11.40 0.00 2.32
936 946 3.620472 GCCATGATTCTGGTGCCAAATTT 60.620 43.478 0.00 0.00 38.63 1.82
937 947 2.093341 GCCATGATTCTGGTGCCAAATT 60.093 45.455 0.00 0.00 38.63 1.82
938 948 1.483415 GCCATGATTCTGGTGCCAAAT 59.517 47.619 0.00 0.00 38.63 2.32
939 949 0.896923 GCCATGATTCTGGTGCCAAA 59.103 50.000 0.00 0.00 38.63 3.28
940 950 0.971959 GGCCATGATTCTGGTGCCAA 60.972 55.000 0.00 0.00 38.63 4.52
941 951 1.380246 GGCCATGATTCTGGTGCCA 60.380 57.895 0.00 0.00 38.63 4.92
942 952 2.484062 CGGCCATGATTCTGGTGCC 61.484 63.158 2.24 0.00 38.63 5.01
943 953 1.031571 TTCGGCCATGATTCTGGTGC 61.032 55.000 2.24 0.00 38.63 5.01
944 954 1.462616 TTTCGGCCATGATTCTGGTG 58.537 50.000 2.24 0.00 38.63 4.17
945 955 2.094675 CTTTTCGGCCATGATTCTGGT 58.905 47.619 2.24 0.00 38.63 4.00
946 956 2.368439 TCTTTTCGGCCATGATTCTGG 58.632 47.619 2.24 0.00 39.45 3.86
947 957 3.441572 AGTTCTTTTCGGCCATGATTCTG 59.558 43.478 2.24 0.00 0.00 3.02
958 968 1.743394 GTATGGGCCAGTTCTTTTCGG 59.257 52.381 13.78 0.00 0.00 4.30
959 969 2.161609 GTGTATGGGCCAGTTCTTTTCG 59.838 50.000 13.78 0.00 0.00 3.46
960 970 3.057526 GTGTGTATGGGCCAGTTCTTTTC 60.058 47.826 13.78 0.00 0.00 2.29
961 971 2.890945 GTGTGTATGGGCCAGTTCTTTT 59.109 45.455 13.78 0.00 0.00 2.27
962 972 2.158534 TGTGTGTATGGGCCAGTTCTTT 60.159 45.455 13.78 0.00 0.00 2.52
963 973 1.423541 TGTGTGTATGGGCCAGTTCTT 59.576 47.619 13.78 0.00 0.00 2.52
964 974 1.064003 TGTGTGTATGGGCCAGTTCT 58.936 50.000 13.78 0.00 0.00 3.01
965 975 1.165270 GTGTGTGTATGGGCCAGTTC 58.835 55.000 13.78 5.38 0.00 3.01
966 976 0.771127 AGTGTGTGTATGGGCCAGTT 59.229 50.000 13.78 0.00 0.00 3.16
967 977 0.324943 GAGTGTGTGTATGGGCCAGT 59.675 55.000 13.78 2.83 0.00 4.00
968 978 0.392998 GGAGTGTGTGTATGGGCCAG 60.393 60.000 13.78 0.00 0.00 4.85
969 979 1.130678 TGGAGTGTGTGTATGGGCCA 61.131 55.000 9.61 9.61 0.00 5.36
970 980 0.037590 TTGGAGTGTGTGTATGGGCC 59.962 55.000 0.00 0.00 0.00 5.80
971 981 1.812571 CTTTGGAGTGTGTGTATGGGC 59.187 52.381 0.00 0.00 0.00 5.36
972 982 2.436417 CCTTTGGAGTGTGTGTATGGG 58.564 52.381 0.00 0.00 0.00 4.00
973 983 2.039746 TCCCTTTGGAGTGTGTGTATGG 59.960 50.000 0.00 0.00 35.03 2.74
974 984 3.417069 TCCCTTTGGAGTGTGTGTATG 57.583 47.619 0.00 0.00 35.03 2.39
985 995 1.063717 GGCCATGATTCTCCCTTTGGA 60.064 52.381 0.00 0.00 38.75 3.53
986 996 1.406903 GGCCATGATTCTCCCTTTGG 58.593 55.000 0.00 0.00 0.00 3.28
987 997 1.027357 CGGCCATGATTCTCCCTTTG 58.973 55.000 2.24 0.00 0.00 2.77
988 998 0.918983 TCGGCCATGATTCTCCCTTT 59.081 50.000 2.24 0.00 0.00 3.11
989 999 0.918983 TTCGGCCATGATTCTCCCTT 59.081 50.000 2.24 0.00 0.00 3.95
990 1000 0.918983 TTTCGGCCATGATTCTCCCT 59.081 50.000 2.24 0.00 0.00 4.20
991 1001 1.678101 CTTTTCGGCCATGATTCTCCC 59.322 52.381 2.24 0.00 0.00 4.30
992 1002 2.643551 TCTTTTCGGCCATGATTCTCC 58.356 47.619 2.24 0.00 0.00 3.71
993 1003 3.691609 AGTTCTTTTCGGCCATGATTCTC 59.308 43.478 2.24 0.00 0.00 2.87
994 1004 3.441572 CAGTTCTTTTCGGCCATGATTCT 59.558 43.478 2.24 0.00 0.00 2.40
995 1005 3.428045 CCAGTTCTTTTCGGCCATGATTC 60.428 47.826 2.24 0.00 0.00 2.52
996 1006 2.493278 CCAGTTCTTTTCGGCCATGATT 59.507 45.455 2.24 0.00 0.00 2.57
997 1007 2.094675 CCAGTTCTTTTCGGCCATGAT 58.905 47.619 2.24 0.00 0.00 2.45
998 1008 1.533625 CCAGTTCTTTTCGGCCATGA 58.466 50.000 2.24 0.00 0.00 3.07
999 1009 0.109132 GCCAGTTCTTTTCGGCCATG 60.109 55.000 2.24 0.00 38.67 3.66
1000 1010 2.267045 GCCAGTTCTTTTCGGCCAT 58.733 52.632 2.24 0.00 38.67 4.40
1001 1011 3.758172 GCCAGTTCTTTTCGGCCA 58.242 55.556 2.24 0.00 38.67 5.36
1003 1013 1.250840 ATGGGCCAGTTCTTTTCGGC 61.251 55.000 13.78 0.00 44.10 5.54
1004 1014 1.743394 GTATGGGCCAGTTCTTTTCGG 59.257 52.381 13.78 0.00 0.00 4.30
1005 1015 2.161609 GTGTATGGGCCAGTTCTTTTCG 59.838 50.000 13.78 0.00 0.00 3.46
1750 4426 4.722700 CCGCCACACCTTCCCCTG 62.723 72.222 0.00 0.00 0.00 4.45
1893 4569 3.102276 GTCGATGTAGAACTGCTTCTCG 58.898 50.000 0.00 0.00 37.87 4.04
1907 4583 3.366070 CGTGGTCTTCTTGTAGTCGATGT 60.366 47.826 0.00 0.00 0.00 3.06
1980 4671 1.967535 GGCTTGTTCTCCTTTGCCC 59.032 57.895 0.00 0.00 34.81 5.36
2130 4821 2.215942 AACTGCTTGGGGAATACCAC 57.784 50.000 0.00 0.00 41.03 4.16
2131 4822 2.916934 AGTAACTGCTTGGGGAATACCA 59.083 45.455 0.00 0.00 42.91 3.25
2132 4823 3.542648 GAGTAACTGCTTGGGGAATACC 58.457 50.000 0.00 0.00 39.11 2.73
2149 4840 2.512896 ACATAGAGGAACGGAGGGAGTA 59.487 50.000 0.00 0.00 0.00 2.59
2153 4844 3.555168 GCATTACATAGAGGAACGGAGGG 60.555 52.174 0.00 0.00 0.00 4.30
2154 4845 3.654414 GCATTACATAGAGGAACGGAGG 58.346 50.000 0.00 0.00 0.00 4.30
2155 4846 3.309388 CGCATTACATAGAGGAACGGAG 58.691 50.000 0.00 0.00 0.00 4.63
2156 4847 2.545113 GCGCATTACATAGAGGAACGGA 60.545 50.000 0.30 0.00 0.00 4.69
2157 4848 1.792949 GCGCATTACATAGAGGAACGG 59.207 52.381 0.30 0.00 0.00 4.44
2158 4849 2.469826 TGCGCATTACATAGAGGAACG 58.530 47.619 5.66 0.00 0.00 3.95
2159 4850 4.627467 CCTATGCGCATTACATAGAGGAAC 59.373 45.833 30.42 0.00 46.56 3.62
2160 4851 4.283467 ACCTATGCGCATTACATAGAGGAA 59.717 41.667 30.38 9.92 46.56 3.36
2161 4852 3.832490 ACCTATGCGCATTACATAGAGGA 59.168 43.478 30.38 10.39 46.56 3.71
2162 4853 4.193826 ACCTATGCGCATTACATAGAGG 57.806 45.455 30.42 26.99 46.56 3.69
2163 4854 6.545504 AAAACCTATGCGCATTACATAGAG 57.454 37.500 30.42 17.27 46.56 2.43
2164 4855 6.935741 AAAAACCTATGCGCATTACATAGA 57.064 33.333 30.42 7.47 46.56 1.98
2184 4875 8.920665 CACTACATTTCGAAATAATGCCAAAAA 58.079 29.630 22.33 0.00 36.65 1.94
2185 4876 7.062839 GCACTACATTTCGAAATAATGCCAAAA 59.937 33.333 22.33 0.00 36.65 2.44
2186 4877 6.529829 GCACTACATTTCGAAATAATGCCAAA 59.470 34.615 22.33 2.65 36.65 3.28
2187 4878 6.033341 GCACTACATTTCGAAATAATGCCAA 58.967 36.000 22.33 2.38 36.65 4.52
2188 4879 5.577835 GCACTACATTTCGAAATAATGCCA 58.422 37.500 22.33 4.30 36.65 4.92
2189 4880 4.670621 CGCACTACATTTCGAAATAATGCC 59.329 41.667 22.33 12.40 36.65 4.40
2190 4881 5.263185 ACGCACTACATTTCGAAATAATGC 58.737 37.500 22.33 23.39 36.65 3.56
2191 4882 8.987599 AATACGCACTACATTTCGAAATAATG 57.012 30.769 22.33 14.77 38.61 1.90
2193 4884 8.270799 GCTAATACGCACTACATTTCGAAATAA 58.729 33.333 22.33 12.88 0.00 1.40
2194 4885 7.650504 AGCTAATACGCACTACATTTCGAAATA 59.349 33.333 22.33 8.04 0.00 1.40
2195 4886 6.479001 AGCTAATACGCACTACATTTCGAAAT 59.521 34.615 17.60 17.60 0.00 2.17
2196 4887 5.808540 AGCTAATACGCACTACATTTCGAAA 59.191 36.000 13.91 13.91 0.00 3.46
2197 4888 5.345702 AGCTAATACGCACTACATTTCGAA 58.654 37.500 0.00 0.00 0.00 3.71
2198 4889 4.928601 AGCTAATACGCACTACATTTCGA 58.071 39.130 0.00 0.00 0.00 3.71
2199 4890 5.913514 AGTAGCTAATACGCACTACATTTCG 59.086 40.000 0.00 0.00 39.55 3.46
2200 4891 7.695869 AAGTAGCTAATACGCACTACATTTC 57.304 36.000 0.00 0.00 39.55 2.17
2201 4892 7.011109 CCAAAGTAGCTAATACGCACTACATTT 59.989 37.037 0.00 0.00 39.55 2.32
2202 4893 6.479001 CCAAAGTAGCTAATACGCACTACATT 59.521 38.462 0.00 0.00 39.55 2.71
2203 4894 5.983720 CCAAAGTAGCTAATACGCACTACAT 59.016 40.000 0.00 0.00 39.55 2.29
2204 4895 5.345702 CCAAAGTAGCTAATACGCACTACA 58.654 41.667 0.00 0.00 39.55 2.74
2205 4896 4.743644 CCCAAAGTAGCTAATACGCACTAC 59.256 45.833 0.00 0.00 39.55 2.73
2206 4897 4.738541 GCCCAAAGTAGCTAATACGCACTA 60.739 45.833 0.00 0.00 39.55 2.74
2207 4898 3.793559 CCCAAAGTAGCTAATACGCACT 58.206 45.455 0.00 0.00 39.55 4.40
2208 4899 2.287103 GCCCAAAGTAGCTAATACGCAC 59.713 50.000 0.00 0.00 39.55 5.34
2209 4900 2.169769 AGCCCAAAGTAGCTAATACGCA 59.830 45.455 0.00 0.00 39.55 5.24
2210 4901 2.801111 GAGCCCAAAGTAGCTAATACGC 59.199 50.000 0.00 0.00 40.11 4.42
2211 4902 4.323553 AGAGCCCAAAGTAGCTAATACG 57.676 45.455 0.00 0.00 40.11 3.06
2212 4903 6.183360 CCAAAAGAGCCCAAAGTAGCTAATAC 60.183 42.308 0.00 0.00 40.11 1.89
2213 4904 5.885912 CCAAAAGAGCCCAAAGTAGCTAATA 59.114 40.000 0.00 0.00 40.11 0.98
2214 4905 4.706962 CCAAAAGAGCCCAAAGTAGCTAAT 59.293 41.667 0.00 0.00 40.11 1.73
2215 4906 4.079253 CCAAAAGAGCCCAAAGTAGCTAA 58.921 43.478 0.00 0.00 40.11 3.09
2216 4907 3.329520 TCCAAAAGAGCCCAAAGTAGCTA 59.670 43.478 0.00 0.00 40.11 3.32
2217 4908 2.108250 TCCAAAAGAGCCCAAAGTAGCT 59.892 45.455 0.00 0.00 43.55 3.32
2218 4909 2.229062 GTCCAAAAGAGCCCAAAGTAGC 59.771 50.000 0.00 0.00 0.00 3.58
2219 4910 2.484264 CGTCCAAAAGAGCCCAAAGTAG 59.516 50.000 0.00 0.00 0.00 2.57
2220 4911 2.105134 TCGTCCAAAAGAGCCCAAAGTA 59.895 45.455 0.00 0.00 0.00 2.24
2221 4912 1.133915 TCGTCCAAAAGAGCCCAAAGT 60.134 47.619 0.00 0.00 0.00 2.66
2222 4913 1.604604 TCGTCCAAAAGAGCCCAAAG 58.395 50.000 0.00 0.00 0.00 2.77
2223 4914 2.060050 TTCGTCCAAAAGAGCCCAAA 57.940 45.000 0.00 0.00 0.00 3.28
2224 4915 1.679153 GTTTCGTCCAAAAGAGCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
2225 4916 1.133915 AGTTTCGTCCAAAAGAGCCCA 60.134 47.619 0.00 0.00 0.00 5.36
2226 4917 1.605753 AGTTTCGTCCAAAAGAGCCC 58.394 50.000 0.00 0.00 0.00 5.19
2227 4918 4.062991 TCTTAGTTTCGTCCAAAAGAGCC 58.937 43.478 0.00 0.00 0.00 4.70
2228 4919 5.270812 CTCTTAGTTTCGTCCAAAAGAGC 57.729 43.478 0.00 0.00 35.14 4.09
2229 4920 4.750098 TGCTCTTAGTTTCGTCCAAAAGAG 59.250 41.667 12.20 12.20 41.71 2.85
2230 4921 4.699637 TGCTCTTAGTTTCGTCCAAAAGA 58.300 39.130 0.00 0.00 0.00 2.52
2231 4922 5.418310 TTGCTCTTAGTTTCGTCCAAAAG 57.582 39.130 0.00 0.00 0.00 2.27
2232 4923 6.262273 AGAATTGCTCTTAGTTTCGTCCAAAA 59.738 34.615 0.00 0.00 0.00 2.44
2233 4924 5.763204 AGAATTGCTCTTAGTTTCGTCCAAA 59.237 36.000 0.00 0.00 0.00 3.28
2234 4925 5.305585 AGAATTGCTCTTAGTTTCGTCCAA 58.694 37.500 0.00 0.00 0.00 3.53
2235 4926 4.894784 AGAATTGCTCTTAGTTTCGTCCA 58.105 39.130 0.00 0.00 0.00 4.02
2236 4927 5.005875 GCTAGAATTGCTCTTAGTTTCGTCC 59.994 44.000 0.00 0.00 35.41 4.79
2237 4928 5.577164 TGCTAGAATTGCTCTTAGTTTCGTC 59.423 40.000 0.00 0.00 35.41 4.20
2238 4929 5.479306 TGCTAGAATTGCTCTTAGTTTCGT 58.521 37.500 0.00 0.00 35.41 3.85
2239 4930 6.408858 TTGCTAGAATTGCTCTTAGTTTCG 57.591 37.500 0.00 0.00 35.41 3.46
2240 4931 7.024171 GGTTTGCTAGAATTGCTCTTAGTTTC 58.976 38.462 0.00 0.00 35.41 2.78
2241 4932 6.071896 GGGTTTGCTAGAATTGCTCTTAGTTT 60.072 38.462 0.00 0.00 35.41 2.66
2242 4933 5.416013 GGGTTTGCTAGAATTGCTCTTAGTT 59.584 40.000 0.00 0.00 35.41 2.24
2243 4934 4.944317 GGGTTTGCTAGAATTGCTCTTAGT 59.056 41.667 0.00 0.00 35.41 2.24
2447 5138 7.903995 TTCAGATTTGCAGTTTTTCTGTTTT 57.096 28.000 10.96 0.00 45.23 2.43
2615 5309 3.405093 GATGGACTCCATGGCGCCA 62.405 63.158 34.80 34.80 45.26 5.69
2661 5355 2.204461 TGGAACAAGCGACGGAGGA 61.204 57.895 0.00 0.00 31.92 3.71
2778 5472 6.318112 TGATATGGCAAGGAGAGAGATCTTA 58.682 40.000 0.00 0.00 0.00 2.10
2870 5565 6.499172 TGAAAACAAATCGCTGTCATTGTTA 58.501 32.000 3.48 0.00 43.16 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.