Multiple sequence alignment - TraesCS4D01G322500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G322500 | chr4D | 100.000 | 2918 | 0 | 0 | 1 | 2918 | 484496092 | 484493175 | 0.000000e+00 | 5389.0 |
1 | TraesCS4D01G322500 | chr4D | 80.556 | 684 | 91 | 23 | 1089 | 1757 | 484620926 | 484621582 | 3.380000e-134 | 488.0 |
2 | TraesCS4D01G322500 | chr4D | 93.093 | 333 | 21 | 2 | 1 | 331 | 134500220 | 134499888 | 1.220000e-133 | 486.0 |
3 | TraesCS4D01G322500 | chr4D | 83.333 | 84 | 11 | 3 | 2148 | 2229 | 484181532 | 484181614 | 1.120000e-09 | 75.0 |
4 | TraesCS4D01G322500 | chr4B | 92.991 | 1869 | 97 | 11 | 771 | 2626 | 616736952 | 616735105 | 0.000000e+00 | 2695.0 |
5 | TraesCS4D01G322500 | chr4B | 92.180 | 422 | 29 | 4 | 318 | 738 | 616737436 | 616737018 | 6.960000e-166 | 593.0 |
6 | TraesCS4D01G322500 | chr4B | 92.333 | 300 | 10 | 7 | 2627 | 2918 | 616734948 | 616734654 | 5.820000e-112 | 414.0 |
7 | TraesCS4D01G322500 | chr5A | 90.931 | 1632 | 112 | 18 | 713 | 2325 | 665080335 | 665078721 | 0.000000e+00 | 2161.0 |
8 | TraesCS4D01G322500 | chr5A | 90.000 | 620 | 24 | 12 | 2329 | 2918 | 665078664 | 665078053 | 0.000000e+00 | 767.0 |
9 | TraesCS4D01G322500 | chr5A | 81.113 | 683 | 89 | 23 | 1089 | 1757 | 665443811 | 665444467 | 7.210000e-141 | 510.0 |
10 | TraesCS4D01G322500 | chr5A | 95.000 | 320 | 14 | 2 | 1 | 318 | 585515939 | 585516258 | 4.340000e-138 | 501.0 |
11 | TraesCS4D01G322500 | chr5A | 86.352 | 403 | 48 | 5 | 318 | 717 | 665081888 | 665081490 | 1.610000e-117 | 433.0 |
12 | TraesCS4D01G322500 | chrUn | 86.694 | 977 | 79 | 27 | 999 | 1927 | 270382817 | 270381844 | 0.000000e+00 | 1037.0 |
13 | TraesCS4D01G322500 | chrUn | 80.455 | 660 | 83 | 29 | 1115 | 1757 | 336370576 | 336369946 | 2.050000e-126 | 462.0 |
14 | TraesCS4D01G322500 | chr3A | 86.140 | 974 | 84 | 24 | 999 | 1924 | 30996858 | 30997828 | 0.000000e+00 | 1003.0 |
15 | TraesCS4D01G322500 | chr3A | 81.009 | 674 | 88 | 20 | 1098 | 1757 | 31559372 | 31560019 | 1.560000e-137 | 499.0 |
16 | TraesCS4D01G322500 | chr3A | 82.105 | 285 | 42 | 8 | 1121 | 1405 | 482184430 | 482184155 | 4.860000e-58 | 235.0 |
17 | TraesCS4D01G322500 | chr3B | 81.406 | 683 | 85 | 24 | 1090 | 1757 | 37970896 | 37971551 | 1.200000e-143 | 520.0 |
18 | TraesCS4D01G322500 | chr3D | 81.399 | 672 | 89 | 20 | 1098 | 1757 | 21793221 | 21793868 | 1.550000e-142 | 516.0 |
19 | TraesCS4D01G322500 | chr3D | 94.671 | 319 | 15 | 2 | 1 | 318 | 250860066 | 250860383 | 7.260000e-136 | 494.0 |
20 | TraesCS4D01G322500 | chr5D | 93.114 | 334 | 21 | 2 | 1 | 332 | 82299715 | 82300048 | 3.380000e-134 | 488.0 |
21 | TraesCS4D01G322500 | chr5D | 92.814 | 334 | 22 | 2 | 1 | 332 | 261899295 | 261899628 | 1.570000e-132 | 483.0 |
22 | TraesCS4D01G322500 | chr5D | 92.814 | 334 | 21 | 3 | 1 | 332 | 301251758 | 301251426 | 5.660000e-132 | 481.0 |
23 | TraesCS4D01G322500 | chr2D | 93.134 | 335 | 19 | 4 | 1 | 332 | 307810941 | 307811274 | 3.380000e-134 | 488.0 |
24 | TraesCS4D01G322500 | chr2D | 93.114 | 334 | 20 | 3 | 1 | 332 | 194633805 | 194633473 | 1.220000e-133 | 486.0 |
25 | TraesCS4D01G322500 | chr2D | 78.855 | 227 | 42 | 4 | 502 | 725 | 545040995 | 545040772 | 6.520000e-32 | 148.0 |
26 | TraesCS4D01G322500 | chr6D | 93.114 | 334 | 19 | 4 | 1 | 332 | 268055103 | 268054772 | 1.220000e-133 | 486.0 |
27 | TraesCS4D01G322500 | chr1D | 80.333 | 300 | 46 | 13 | 1446 | 1734 | 454813341 | 454813638 | 6.330000e-52 | 215.0 |
28 | TraesCS4D01G322500 | chr1D | 79.239 | 289 | 51 | 8 | 1123 | 1411 | 454493609 | 454493330 | 2.970000e-45 | 193.0 |
29 | TraesCS4D01G322500 | chr1A | 80.952 | 273 | 41 | 11 | 1472 | 1734 | 548733969 | 548734240 | 3.810000e-49 | 206.0 |
30 | TraesCS4D01G322500 | chr1A | 80.212 | 283 | 47 | 8 | 1123 | 1405 | 548733572 | 548733845 | 1.370000e-48 | 204.0 |
31 | TraesCS4D01G322500 | chr1A | 78.799 | 283 | 51 | 7 | 1123 | 1405 | 548789535 | 548789808 | 6.420000e-42 | 182.0 |
32 | TraesCS4D01G322500 | chr1B | 79.577 | 284 | 45 | 10 | 1123 | 1404 | 624971035 | 624971307 | 1.070000e-44 | 191.0 |
33 | TraesCS4D01G322500 | chr7A | 90.244 | 82 | 7 | 1 | 645 | 726 | 194796167 | 194796087 | 3.980000e-19 | 106.0 |
34 | TraesCS4D01G322500 | chr7D | 82.906 | 117 | 18 | 2 | 610 | 726 | 189246066 | 189246180 | 1.430000e-18 | 104.0 |
35 | TraesCS4D01G322500 | chr2A | 87.671 | 73 | 8 | 1 | 651 | 722 | 419619021 | 419618949 | 1.860000e-12 | 84.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G322500 | chr4D | 484493175 | 484496092 | 2917 | True | 5389.000000 | 5389 | 100.000000 | 1 | 2918 | 1 | chr4D.!!$R2 | 2917 |
1 | TraesCS4D01G322500 | chr4D | 484620926 | 484621582 | 656 | False | 488.000000 | 488 | 80.556000 | 1089 | 1757 | 1 | chr4D.!!$F2 | 668 |
2 | TraesCS4D01G322500 | chr4B | 616734654 | 616737436 | 2782 | True | 1234.000000 | 2695 | 92.501333 | 318 | 2918 | 3 | chr4B.!!$R1 | 2600 |
3 | TraesCS4D01G322500 | chr5A | 665078053 | 665081888 | 3835 | True | 1120.333333 | 2161 | 89.094333 | 318 | 2918 | 3 | chr5A.!!$R1 | 2600 |
4 | TraesCS4D01G322500 | chr5A | 665443811 | 665444467 | 656 | False | 510.000000 | 510 | 81.113000 | 1089 | 1757 | 1 | chr5A.!!$F2 | 668 |
5 | TraesCS4D01G322500 | chrUn | 270381844 | 270382817 | 973 | True | 1037.000000 | 1037 | 86.694000 | 999 | 1927 | 1 | chrUn.!!$R1 | 928 |
6 | TraesCS4D01G322500 | chrUn | 336369946 | 336370576 | 630 | True | 462.000000 | 462 | 80.455000 | 1115 | 1757 | 1 | chrUn.!!$R2 | 642 |
7 | TraesCS4D01G322500 | chr3A | 30996858 | 30997828 | 970 | False | 1003.000000 | 1003 | 86.140000 | 999 | 1924 | 1 | chr3A.!!$F1 | 925 |
8 | TraesCS4D01G322500 | chr3A | 31559372 | 31560019 | 647 | False | 499.000000 | 499 | 81.009000 | 1098 | 1757 | 1 | chr3A.!!$F2 | 659 |
9 | TraesCS4D01G322500 | chr3B | 37970896 | 37971551 | 655 | False | 520.000000 | 520 | 81.406000 | 1090 | 1757 | 1 | chr3B.!!$F1 | 667 |
10 | TraesCS4D01G322500 | chr3D | 21793221 | 21793868 | 647 | False | 516.000000 | 516 | 81.399000 | 1098 | 1757 | 1 | chr3D.!!$F1 | 659 |
11 | TraesCS4D01G322500 | chr1A | 548733572 | 548734240 | 668 | False | 205.000000 | 206 | 80.582000 | 1123 | 1734 | 2 | chr1A.!!$F2 | 611 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
182 | 183 | 0.040794 | AGGCTTACTAGGGACACGGT | 59.959 | 55.0 | 0.0 | 0.0 | 0.0 | 4.83 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2128 | 3479 | 0.248743 | ATGCTCGATTTGCCAATGCG | 60.249 | 50.0 | 0.0 | 0.0 | 41.78 | 4.73 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
23 | 24 | 5.886960 | AAGAAGGCAGTAGCAATAAACTG | 57.113 | 39.130 | 0.00 | 0.00 | 44.61 | 3.16 |
24 | 25 | 5.165961 | AGAAGGCAGTAGCAATAAACTGA | 57.834 | 39.130 | 6.65 | 0.00 | 44.61 | 3.41 |
25 | 26 | 5.560724 | AGAAGGCAGTAGCAATAAACTGAA | 58.439 | 37.500 | 6.65 | 0.00 | 44.61 | 3.02 |
26 | 27 | 5.412904 | AGAAGGCAGTAGCAATAAACTGAAC | 59.587 | 40.000 | 6.65 | 0.00 | 44.61 | 3.18 |
27 | 28 | 3.684788 | AGGCAGTAGCAATAAACTGAACG | 59.315 | 43.478 | 6.65 | 0.00 | 44.61 | 3.95 |
28 | 29 | 3.682858 | GGCAGTAGCAATAAACTGAACGA | 59.317 | 43.478 | 6.65 | 0.00 | 44.61 | 3.85 |
29 | 30 | 4.332819 | GGCAGTAGCAATAAACTGAACGAT | 59.667 | 41.667 | 6.65 | 0.00 | 44.61 | 3.73 |
30 | 31 | 5.493735 | GCAGTAGCAATAAACTGAACGATC | 58.506 | 41.667 | 6.65 | 0.00 | 41.58 | 3.69 |
31 | 32 | 5.063438 | GCAGTAGCAATAAACTGAACGATCA | 59.937 | 40.000 | 6.65 | 0.00 | 41.58 | 2.92 |
32 | 33 | 6.238211 | GCAGTAGCAATAAACTGAACGATCAT | 60.238 | 38.462 | 6.65 | 0.00 | 41.58 | 2.45 |
33 | 34 | 7.042725 | GCAGTAGCAATAAACTGAACGATCATA | 60.043 | 37.037 | 6.65 | 0.00 | 41.58 | 2.15 |
34 | 35 | 8.982685 | CAGTAGCAATAAACTGAACGATCATAT | 58.017 | 33.333 | 0.00 | 0.00 | 34.37 | 1.78 |
35 | 36 | 8.982685 | AGTAGCAATAAACTGAACGATCATATG | 58.017 | 33.333 | 0.00 | 0.00 | 34.37 | 1.78 |
36 | 37 | 6.662616 | AGCAATAAACTGAACGATCATATGC | 58.337 | 36.000 | 0.00 | 1.83 | 34.37 | 3.14 |
37 | 38 | 6.484643 | AGCAATAAACTGAACGATCATATGCT | 59.515 | 34.615 | 0.00 | 3.96 | 34.37 | 3.79 |
38 | 39 | 7.657354 | AGCAATAAACTGAACGATCATATGCTA | 59.343 | 33.333 | 12.01 | 0.00 | 34.37 | 3.49 |
39 | 40 | 8.446273 | GCAATAAACTGAACGATCATATGCTAT | 58.554 | 33.333 | 0.00 | 0.00 | 34.37 | 2.97 |
40 | 41 | 9.750882 | CAATAAACTGAACGATCATATGCTATG | 57.249 | 33.333 | 0.00 | 0.00 | 34.37 | 2.23 |
41 | 42 | 5.852738 | AACTGAACGATCATATGCTATGC | 57.147 | 39.130 | 0.00 | 0.00 | 34.37 | 3.14 |
42 | 43 | 5.144692 | ACTGAACGATCATATGCTATGCT | 57.855 | 39.130 | 0.00 | 0.00 | 34.37 | 3.79 |
43 | 44 | 6.272822 | ACTGAACGATCATATGCTATGCTA | 57.727 | 37.500 | 0.00 | 0.00 | 34.37 | 3.49 |
44 | 45 | 6.691508 | ACTGAACGATCATATGCTATGCTAA | 58.308 | 36.000 | 0.00 | 0.00 | 34.37 | 3.09 |
45 | 46 | 6.587990 | ACTGAACGATCATATGCTATGCTAAC | 59.412 | 38.462 | 0.00 | 0.00 | 34.37 | 2.34 |
46 | 47 | 6.454795 | TGAACGATCATATGCTATGCTAACA | 58.545 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
47 | 48 | 6.587608 | TGAACGATCATATGCTATGCTAACAG | 59.412 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
48 | 49 | 6.272822 | ACGATCATATGCTATGCTAACAGA | 57.727 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
49 | 50 | 6.871844 | ACGATCATATGCTATGCTAACAGAT | 58.128 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
50 | 51 | 6.755607 | ACGATCATATGCTATGCTAACAGATG | 59.244 | 38.462 | 0.00 | 0.00 | 35.00 | 2.90 |
51 | 52 | 6.200475 | CGATCATATGCTATGCTAACAGATGG | 59.800 | 42.308 | 0.00 | 0.00 | 34.58 | 3.51 |
52 | 53 | 5.737860 | TCATATGCTATGCTAACAGATGGG | 58.262 | 41.667 | 0.00 | 0.00 | 34.58 | 4.00 |
53 | 54 | 5.249163 | TCATATGCTATGCTAACAGATGGGT | 59.751 | 40.000 | 0.00 | 0.00 | 34.58 | 4.51 |
54 | 55 | 3.475566 | TGCTATGCTAACAGATGGGTC | 57.524 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
55 | 56 | 3.041211 | TGCTATGCTAACAGATGGGTCT | 58.959 | 45.455 | 0.00 | 0.00 | 34.14 | 3.85 |
56 | 57 | 3.455910 | TGCTATGCTAACAGATGGGTCTT | 59.544 | 43.478 | 0.00 | 0.00 | 30.42 | 3.01 |
57 | 58 | 3.812053 | GCTATGCTAACAGATGGGTCTTG | 59.188 | 47.826 | 0.00 | 0.00 | 30.42 | 3.02 |
58 | 59 | 4.684485 | GCTATGCTAACAGATGGGTCTTGT | 60.684 | 45.833 | 0.00 | 0.00 | 30.42 | 3.16 |
59 | 60 | 3.334583 | TGCTAACAGATGGGTCTTGTC | 57.665 | 47.619 | 0.00 | 0.00 | 30.42 | 3.18 |
60 | 61 | 2.027192 | TGCTAACAGATGGGTCTTGTCC | 60.027 | 50.000 | 0.00 | 0.00 | 30.42 | 4.02 |
61 | 62 | 2.027192 | GCTAACAGATGGGTCTTGTCCA | 60.027 | 50.000 | 0.00 | 0.00 | 38.82 | 4.02 |
62 | 63 | 3.370953 | GCTAACAGATGGGTCTTGTCCAT | 60.371 | 47.826 | 0.00 | 0.00 | 46.73 | 3.41 |
68 | 69 | 2.270352 | TGGGTCTTGTCCATCACAAC | 57.730 | 50.000 | 0.00 | 0.00 | 40.29 | 3.32 |
69 | 70 | 1.492599 | TGGGTCTTGTCCATCACAACA | 59.507 | 47.619 | 0.00 | 0.00 | 40.29 | 3.33 |
70 | 71 | 2.108075 | TGGGTCTTGTCCATCACAACAT | 59.892 | 45.455 | 0.00 | 0.00 | 40.29 | 2.71 |
71 | 72 | 3.157087 | GGGTCTTGTCCATCACAACATT | 58.843 | 45.455 | 0.00 | 0.00 | 40.29 | 2.71 |
72 | 73 | 3.191371 | GGGTCTTGTCCATCACAACATTC | 59.809 | 47.826 | 0.00 | 0.00 | 40.29 | 2.67 |
73 | 74 | 4.074970 | GGTCTTGTCCATCACAACATTCT | 58.925 | 43.478 | 0.00 | 0.00 | 40.29 | 2.40 |
74 | 75 | 4.154918 | GGTCTTGTCCATCACAACATTCTC | 59.845 | 45.833 | 0.00 | 0.00 | 40.29 | 2.87 |
75 | 76 | 4.154918 | GTCTTGTCCATCACAACATTCTCC | 59.845 | 45.833 | 0.00 | 0.00 | 40.29 | 3.71 |
76 | 77 | 4.042062 | TCTTGTCCATCACAACATTCTCCT | 59.958 | 41.667 | 0.00 | 0.00 | 40.29 | 3.69 |
77 | 78 | 5.248248 | TCTTGTCCATCACAACATTCTCCTA | 59.752 | 40.000 | 0.00 | 0.00 | 40.29 | 2.94 |
78 | 79 | 5.497464 | TGTCCATCACAACATTCTCCTAA | 57.503 | 39.130 | 0.00 | 0.00 | 29.30 | 2.69 |
79 | 80 | 6.065976 | TGTCCATCACAACATTCTCCTAAT | 57.934 | 37.500 | 0.00 | 0.00 | 29.30 | 1.73 |
80 | 81 | 5.882000 | TGTCCATCACAACATTCTCCTAATG | 59.118 | 40.000 | 0.00 | 0.00 | 29.30 | 1.90 |
81 | 82 | 6.115446 | GTCCATCACAACATTCTCCTAATGA | 58.885 | 40.000 | 4.82 | 0.00 | 0.00 | 2.57 |
82 | 83 | 6.769822 | GTCCATCACAACATTCTCCTAATGAT | 59.230 | 38.462 | 4.82 | 0.00 | 0.00 | 2.45 |
83 | 84 | 6.769341 | TCCATCACAACATTCTCCTAATGATG | 59.231 | 38.462 | 4.82 | 5.73 | 41.09 | 3.07 |
84 | 85 | 6.544931 | CCATCACAACATTCTCCTAATGATGT | 59.455 | 38.462 | 7.55 | 7.55 | 42.04 | 3.06 |
88 | 89 | 7.798596 | ACAACATTCTCCTAATGATGTGATC | 57.201 | 36.000 | 11.36 | 0.00 | 40.54 | 2.92 |
89 | 90 | 6.769822 | ACAACATTCTCCTAATGATGTGATCC | 59.230 | 38.462 | 11.36 | 0.00 | 40.54 | 3.36 |
90 | 91 | 5.874093 | ACATTCTCCTAATGATGTGATCCC | 58.126 | 41.667 | 4.82 | 0.00 | 0.00 | 3.85 |
91 | 92 | 4.607293 | TTCTCCTAATGATGTGATCCCG | 57.393 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
92 | 93 | 3.576861 | TCTCCTAATGATGTGATCCCGT | 58.423 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
93 | 94 | 3.967326 | TCTCCTAATGATGTGATCCCGTT | 59.033 | 43.478 | 0.00 | 0.00 | 0.00 | 4.44 |
94 | 95 | 5.144832 | TCTCCTAATGATGTGATCCCGTTA | 58.855 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
95 | 96 | 5.780282 | TCTCCTAATGATGTGATCCCGTTAT | 59.220 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
96 | 97 | 6.037786 | TCCTAATGATGTGATCCCGTTATC | 57.962 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
97 | 98 | 5.542251 | TCCTAATGATGTGATCCCGTTATCA | 59.458 | 40.000 | 0.00 | 0.00 | 33.48 | 2.15 |
98 | 99 | 6.042666 | TCCTAATGATGTGATCCCGTTATCAA | 59.957 | 38.462 | 0.00 | 0.00 | 37.61 | 2.57 |
99 | 100 | 6.710295 | CCTAATGATGTGATCCCGTTATCAAA | 59.290 | 38.462 | 0.00 | 0.00 | 37.61 | 2.69 |
100 | 101 | 7.391554 | CCTAATGATGTGATCCCGTTATCAAAT | 59.608 | 37.037 | 0.70 | 0.70 | 36.67 | 2.32 |
101 | 102 | 6.564709 | ATGATGTGATCCCGTTATCAAATG | 57.435 | 37.500 | 4.98 | 0.00 | 34.56 | 2.32 |
102 | 103 | 5.679601 | TGATGTGATCCCGTTATCAAATGA | 58.320 | 37.500 | 4.98 | 0.00 | 34.56 | 2.57 |
103 | 104 | 5.527214 | TGATGTGATCCCGTTATCAAATGAC | 59.473 | 40.000 | 4.98 | 0.00 | 34.56 | 3.06 |
104 | 105 | 4.837972 | TGTGATCCCGTTATCAAATGACA | 58.162 | 39.130 | 0.00 | 0.00 | 37.61 | 3.58 |
105 | 106 | 5.249420 | TGTGATCCCGTTATCAAATGACAA | 58.751 | 37.500 | 0.00 | 0.00 | 37.61 | 3.18 |
106 | 107 | 5.123186 | TGTGATCCCGTTATCAAATGACAAC | 59.877 | 40.000 | 0.00 | 0.00 | 37.61 | 3.32 |
107 | 108 | 5.354234 | GTGATCCCGTTATCAAATGACAACT | 59.646 | 40.000 | 3.38 | 0.00 | 37.61 | 3.16 |
108 | 109 | 5.584649 | TGATCCCGTTATCAAATGACAACTC | 59.415 | 40.000 | 3.38 | 0.00 | 32.97 | 3.01 |
109 | 110 | 4.900684 | TCCCGTTATCAAATGACAACTCA | 58.099 | 39.130 | 3.38 | 0.00 | 29.76 | 3.41 |
110 | 111 | 5.496556 | TCCCGTTATCAAATGACAACTCAT | 58.503 | 37.500 | 3.38 | 0.00 | 38.94 | 2.90 |
111 | 112 | 5.353956 | TCCCGTTATCAAATGACAACTCATG | 59.646 | 40.000 | 3.38 | 0.00 | 37.20 | 3.07 |
127 | 128 | 8.324163 | ACAACTCATGTCTATGGTTAGAAAAC | 57.676 | 34.615 | 0.00 | 0.00 | 37.96 | 2.43 |
128 | 129 | 7.390718 | ACAACTCATGTCTATGGTTAGAAAACC | 59.609 | 37.037 | 0.22 | 0.22 | 46.83 | 3.27 |
148 | 149 | 9.124807 | GAAAACCTTAACCATCTTTTGATAACG | 57.875 | 33.333 | 0.00 | 0.00 | 37.40 | 3.18 |
149 | 150 | 7.989416 | AACCTTAACCATCTTTTGATAACGA | 57.011 | 32.000 | 0.00 | 0.00 | 37.40 | 3.85 |
150 | 151 | 7.611213 | ACCTTAACCATCTTTTGATAACGAG | 57.389 | 36.000 | 0.00 | 0.00 | 37.40 | 4.18 |
151 | 152 | 6.093633 | ACCTTAACCATCTTTTGATAACGAGC | 59.906 | 38.462 | 0.00 | 0.00 | 37.40 | 5.03 |
152 | 153 | 6.316390 | CCTTAACCATCTTTTGATAACGAGCT | 59.684 | 38.462 | 0.00 | 0.00 | 37.40 | 4.09 |
153 | 154 | 7.494625 | CCTTAACCATCTTTTGATAACGAGCTA | 59.505 | 37.037 | 0.00 | 0.00 | 37.40 | 3.32 |
154 | 155 | 6.910536 | AACCATCTTTTGATAACGAGCTAG | 57.089 | 37.500 | 0.00 | 0.00 | 37.40 | 3.42 |
155 | 156 | 5.978814 | ACCATCTTTTGATAACGAGCTAGT | 58.021 | 37.500 | 0.00 | 0.00 | 37.40 | 2.57 |
156 | 157 | 6.043411 | ACCATCTTTTGATAACGAGCTAGTC | 58.957 | 40.000 | 0.00 | 0.00 | 37.40 | 2.59 |
157 | 158 | 6.127310 | ACCATCTTTTGATAACGAGCTAGTCT | 60.127 | 38.462 | 0.00 | 0.00 | 37.40 | 3.24 |
158 | 159 | 7.068348 | ACCATCTTTTGATAACGAGCTAGTCTA | 59.932 | 37.037 | 0.00 | 0.00 | 37.40 | 2.59 |
159 | 160 | 7.593273 | CCATCTTTTGATAACGAGCTAGTCTAG | 59.407 | 40.741 | 0.00 | 2.18 | 37.40 | 2.43 |
160 | 161 | 7.627298 | TCTTTTGATAACGAGCTAGTCTAGT | 57.373 | 36.000 | 8.68 | 0.00 | 31.68 | 2.57 |
161 | 162 | 8.728337 | TCTTTTGATAACGAGCTAGTCTAGTA | 57.272 | 34.615 | 8.68 | 0.00 | 30.15 | 1.82 |
162 | 163 | 8.828644 | TCTTTTGATAACGAGCTAGTCTAGTAG | 58.171 | 37.037 | 8.68 | 3.39 | 30.15 | 2.57 |
163 | 164 | 8.728337 | TTTTGATAACGAGCTAGTCTAGTAGA | 57.272 | 34.615 | 8.68 | 0.00 | 30.15 | 2.59 |
164 | 165 | 7.949903 | TTGATAACGAGCTAGTCTAGTAGAG | 57.050 | 40.000 | 8.68 | 1.49 | 30.15 | 2.43 |
165 | 166 | 6.457355 | TGATAACGAGCTAGTCTAGTAGAGG | 58.543 | 44.000 | 8.68 | 0.00 | 30.15 | 3.69 |
166 | 167 | 3.116079 | ACGAGCTAGTCTAGTAGAGGC | 57.884 | 52.381 | 8.68 | 5.92 | 0.00 | 4.70 |
167 | 168 | 2.701951 | ACGAGCTAGTCTAGTAGAGGCT | 59.298 | 50.000 | 17.02 | 17.02 | 44.48 | 4.58 |
168 | 169 | 3.135167 | ACGAGCTAGTCTAGTAGAGGCTT | 59.865 | 47.826 | 17.68 | 6.12 | 36.38 | 4.35 |
169 | 170 | 4.344679 | ACGAGCTAGTCTAGTAGAGGCTTA | 59.655 | 45.833 | 17.68 | 3.40 | 36.38 | 3.09 |
170 | 171 | 4.687483 | CGAGCTAGTCTAGTAGAGGCTTAC | 59.313 | 50.000 | 17.68 | 9.37 | 36.38 | 2.34 |
171 | 172 | 5.510179 | CGAGCTAGTCTAGTAGAGGCTTACT | 60.510 | 48.000 | 17.68 | 12.02 | 36.38 | 2.24 |
172 | 173 | 6.294675 | CGAGCTAGTCTAGTAGAGGCTTACTA | 60.295 | 46.154 | 17.68 | 12.72 | 36.38 | 1.82 |
174 | 175 | 6.013984 | AGCTAGTCTAGTAGAGGCTTACTAGG | 60.014 | 46.154 | 26.08 | 18.07 | 46.84 | 3.02 |
175 | 176 | 5.571791 | AGTCTAGTAGAGGCTTACTAGGG | 57.428 | 47.826 | 26.08 | 14.30 | 46.84 | 3.53 |
176 | 177 | 5.226015 | AGTCTAGTAGAGGCTTACTAGGGA | 58.774 | 45.833 | 26.08 | 15.57 | 46.84 | 4.20 |
177 | 178 | 5.072193 | AGTCTAGTAGAGGCTTACTAGGGAC | 59.928 | 48.000 | 26.08 | 21.45 | 46.84 | 4.46 |
178 | 179 | 4.973856 | TCTAGTAGAGGCTTACTAGGGACA | 59.026 | 45.833 | 26.08 | 14.79 | 46.84 | 4.02 |
179 | 180 | 3.900971 | AGTAGAGGCTTACTAGGGACAC | 58.099 | 50.000 | 7.35 | 0.00 | 32.25 | 3.67 |
180 | 181 | 1.765230 | AGAGGCTTACTAGGGACACG | 58.235 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
181 | 182 | 0.745468 | GAGGCTTACTAGGGACACGG | 59.255 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
182 | 183 | 0.040794 | AGGCTTACTAGGGACACGGT | 59.959 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
183 | 184 | 1.285962 | AGGCTTACTAGGGACACGGTA | 59.714 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
184 | 185 | 2.091444 | AGGCTTACTAGGGACACGGTAT | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
185 | 186 | 2.697229 | GGCTTACTAGGGACACGGTATT | 59.303 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
186 | 187 | 3.133542 | GGCTTACTAGGGACACGGTATTT | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 1.40 |
187 | 188 | 4.117685 | GCTTACTAGGGACACGGTATTTG | 58.882 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
188 | 189 | 4.382362 | GCTTACTAGGGACACGGTATTTGT | 60.382 | 45.833 | 0.00 | 0.00 | 0.00 | 2.83 |
189 | 190 | 5.727434 | CTTACTAGGGACACGGTATTTGTT | 58.273 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
190 | 191 | 4.628963 | ACTAGGGACACGGTATTTGTTT | 57.371 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
191 | 192 | 5.743636 | ACTAGGGACACGGTATTTGTTTA | 57.256 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
192 | 193 | 6.303903 | ACTAGGGACACGGTATTTGTTTAT | 57.696 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
193 | 194 | 6.110707 | ACTAGGGACACGGTATTTGTTTATG | 58.889 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
194 | 195 | 4.913784 | AGGGACACGGTATTTGTTTATGT | 58.086 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
195 | 196 | 6.052405 | AGGGACACGGTATTTGTTTATGTA | 57.948 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
196 | 197 | 6.655930 | AGGGACACGGTATTTGTTTATGTAT | 58.344 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
197 | 198 | 6.764560 | AGGGACACGGTATTTGTTTATGTATC | 59.235 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
198 | 199 | 6.017687 | GGGACACGGTATTTGTTTATGTATCC | 60.018 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
199 | 200 | 6.539464 | GGACACGGTATTTGTTTATGTATCCA | 59.461 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
200 | 201 | 7.311364 | ACACGGTATTTGTTTATGTATCCAC | 57.689 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
201 | 202 | 6.879993 | ACACGGTATTTGTTTATGTATCCACA | 59.120 | 34.615 | 0.00 | 0.00 | 39.52 | 4.17 |
202 | 203 | 7.148373 | ACACGGTATTTGTTTATGTATCCACAC | 60.148 | 37.037 | 0.00 | 0.00 | 37.54 | 3.82 |
203 | 204 | 6.879993 | ACGGTATTTGTTTATGTATCCACACA | 59.120 | 34.615 | 0.00 | 0.00 | 37.54 | 3.72 |
204 | 205 | 7.554835 | ACGGTATTTGTTTATGTATCCACACAT | 59.445 | 33.333 | 0.00 | 0.00 | 41.88 | 3.21 |
205 | 206 | 7.855409 | CGGTATTTGTTTATGTATCCACACATG | 59.145 | 37.037 | 0.00 | 0.00 | 39.46 | 3.21 |
206 | 207 | 8.682710 | GGTATTTGTTTATGTATCCACACATGT | 58.317 | 33.333 | 0.00 | 0.00 | 39.46 | 3.21 |
218 | 219 | 8.952278 | TGTATCCACACATGTATTTAAGTTTCC | 58.048 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
219 | 220 | 6.489127 | TCCACACATGTATTTAAGTTTCCG | 57.511 | 37.500 | 0.00 | 0.00 | 0.00 | 4.30 |
220 | 221 | 5.413213 | TCCACACATGTATTTAAGTTTCCGG | 59.587 | 40.000 | 0.00 | 0.00 | 0.00 | 5.14 |
221 | 222 | 5.182380 | CCACACATGTATTTAAGTTTCCGGT | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 5.28 |
222 | 223 | 6.311723 | CACACATGTATTTAAGTTTCCGGTC | 58.688 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
223 | 224 | 5.998981 | ACACATGTATTTAAGTTTCCGGTCA | 59.001 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
224 | 225 | 6.487331 | ACACATGTATTTAAGTTTCCGGTCAA | 59.513 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
225 | 226 | 7.175990 | ACACATGTATTTAAGTTTCCGGTCAAT | 59.824 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
226 | 227 | 8.670135 | CACATGTATTTAAGTTTCCGGTCAATA | 58.330 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
227 | 228 | 8.671028 | ACATGTATTTAAGTTTCCGGTCAATAC | 58.329 | 33.333 | 0.00 | 0.38 | 0.00 | 1.89 |
228 | 229 | 8.670135 | CATGTATTTAAGTTTCCGGTCAATACA | 58.330 | 33.333 | 0.00 | 6.31 | 39.01 | 2.29 |
229 | 230 | 8.618702 | TGTATTTAAGTTTCCGGTCAATACAA | 57.381 | 30.769 | 0.00 | 0.00 | 34.35 | 2.41 |
230 | 231 | 9.233649 | TGTATTTAAGTTTCCGGTCAATACAAT | 57.766 | 29.630 | 0.00 | 0.00 | 34.35 | 2.71 |
233 | 234 | 7.989416 | TTAAGTTTCCGGTCAATACAATTCT | 57.011 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
234 | 235 | 9.504708 | TTTAAGTTTCCGGTCAATACAATTCTA | 57.495 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
235 | 236 | 7.611213 | AAGTTTCCGGTCAATACAATTCTAG | 57.389 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
236 | 237 | 6.708285 | AGTTTCCGGTCAATACAATTCTAGT | 58.292 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
237 | 238 | 7.844009 | AGTTTCCGGTCAATACAATTCTAGTA | 58.156 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
238 | 239 | 8.483758 | AGTTTCCGGTCAATACAATTCTAGTAT | 58.516 | 33.333 | 0.00 | 0.00 | 33.79 | 2.12 |
239 | 240 | 8.548721 | GTTTCCGGTCAATACAATTCTAGTATG | 58.451 | 37.037 | 0.00 | 0.00 | 32.78 | 2.39 |
240 | 241 | 7.591421 | TCCGGTCAATACAATTCTAGTATGA | 57.409 | 36.000 | 0.00 | 0.00 | 32.78 | 2.15 |
241 | 242 | 8.014070 | TCCGGTCAATACAATTCTAGTATGAA | 57.986 | 34.615 | 0.00 | 0.00 | 32.78 | 2.57 |
242 | 243 | 8.647796 | TCCGGTCAATACAATTCTAGTATGAAT | 58.352 | 33.333 | 0.00 | 0.00 | 38.19 | 2.57 |
243 | 244 | 9.923143 | CCGGTCAATACAATTCTAGTATGAATA | 57.077 | 33.333 | 0.00 | 0.00 | 35.82 | 1.75 |
298 | 299 | 8.828688 | AGTAATAACCGCTTTATTATGTCCTC | 57.171 | 34.615 | 9.41 | 0.00 | 42.22 | 3.71 |
299 | 300 | 8.648693 | AGTAATAACCGCTTTATTATGTCCTCT | 58.351 | 33.333 | 9.41 | 1.64 | 42.22 | 3.69 |
300 | 301 | 9.918630 | GTAATAACCGCTTTATTATGTCCTCTA | 57.081 | 33.333 | 9.41 | 0.00 | 42.22 | 2.43 |
302 | 303 | 5.470047 | ACCGCTTTATTATGTCCTCTAGG | 57.530 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
303 | 304 | 4.283722 | ACCGCTTTATTATGTCCTCTAGGG | 59.716 | 45.833 | 0.00 | 0.00 | 35.41 | 3.53 |
304 | 305 | 4.246458 | CGCTTTATTATGTCCTCTAGGGC | 58.754 | 47.826 | 0.00 | 0.00 | 41.09 | 5.19 |
313 | 314 | 3.664320 | TGTCCTCTAGGGCATATTTCCA | 58.336 | 45.455 | 0.00 | 0.00 | 46.36 | 3.53 |
314 | 315 | 4.044308 | TGTCCTCTAGGGCATATTTCCAA | 58.956 | 43.478 | 0.00 | 0.00 | 46.36 | 3.53 |
315 | 316 | 4.141482 | TGTCCTCTAGGGCATATTTCCAAC | 60.141 | 45.833 | 0.00 | 0.00 | 46.36 | 3.77 |
316 | 317 | 4.044308 | TCCTCTAGGGCATATTTCCAACA | 58.956 | 43.478 | 0.00 | 0.00 | 35.41 | 3.33 |
349 | 350 | 2.304180 | CACTTGTCATCCCTTGTCCTCT | 59.696 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
394 | 395 | 2.454336 | TCATCCCCATCTACGACAGT | 57.546 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
401 | 402 | 2.430694 | CCCATCTACGACAGTTCCATCA | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
485 | 486 | 3.278574 | CGGAAATCTTATCTGGCCAACA | 58.721 | 45.455 | 7.01 | 0.00 | 0.00 | 3.33 |
487 | 488 | 4.023707 | CGGAAATCTTATCTGGCCAACATC | 60.024 | 45.833 | 7.01 | 0.00 | 0.00 | 3.06 |
559 | 560 | 1.975680 | TCGGGGCTAACAGTTTCTTCT | 59.024 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
560 | 561 | 2.370849 | TCGGGGCTAACAGTTTCTTCTT | 59.629 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
561 | 562 | 3.146847 | CGGGGCTAACAGTTTCTTCTTT | 58.853 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
562 | 563 | 4.040706 | TCGGGGCTAACAGTTTCTTCTTTA | 59.959 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
565 | 566 | 5.644206 | GGGGCTAACAGTTTCTTCTTTAGAG | 59.356 | 44.000 | 0.00 | 0.00 | 33.51 | 2.43 |
567 | 568 | 5.163943 | GGCTAACAGTTTCTTCTTTAGAGCG | 60.164 | 44.000 | 0.00 | 0.00 | 33.51 | 5.03 |
568 | 569 | 5.634020 | GCTAACAGTTTCTTCTTTAGAGCGA | 59.366 | 40.000 | 0.00 | 0.00 | 33.51 | 4.93 |
569 | 570 | 5.908916 | AACAGTTTCTTCTTTAGAGCGAC | 57.091 | 39.130 | 0.00 | 0.00 | 33.51 | 5.19 |
570 | 571 | 5.203060 | ACAGTTTCTTCTTTAGAGCGACT | 57.797 | 39.130 | 0.00 | 0.00 | 33.51 | 4.18 |
572 | 573 | 5.221263 | ACAGTTTCTTCTTTAGAGCGACTGA | 60.221 | 40.000 | 15.52 | 0.00 | 39.70 | 3.41 |
573 | 574 | 5.117897 | CAGTTTCTTCTTTAGAGCGACTGAC | 59.882 | 44.000 | 0.00 | 0.00 | 39.70 | 3.51 |
575 | 576 | 5.455056 | TTCTTCTTTAGAGCGACTGACTT | 57.545 | 39.130 | 0.00 | 0.00 | 33.51 | 3.01 |
604 | 605 | 4.336280 | GAGGATGGTAGTTTTGAGCCTTT | 58.664 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
674 | 675 | 9.828220 | CACACAACTAAAAATAACATCAAAACG | 57.172 | 29.630 | 0.00 | 0.00 | 0.00 | 3.60 |
740 | 1900 | 5.358160 | GGAGGTCCATTTCAGAAACCTAATG | 59.642 | 44.000 | 4.48 | 0.00 | 40.39 | 1.90 |
852 | 2051 | 7.801716 | TTTGAAGATATTCCCGGACATTAAG | 57.198 | 36.000 | 0.73 | 0.00 | 0.00 | 1.85 |
868 | 2067 | 6.036517 | GGACATTAAGACTAAGCACACATGAG | 59.963 | 42.308 | 0.00 | 0.00 | 0.00 | 2.90 |
960 | 2162 | 1.139058 | GACACAAGTCCCGGCATCTAT | 59.861 | 52.381 | 0.00 | 0.00 | 38.89 | 1.98 |
993 | 2195 | 3.356290 | AGTGCTTGTCAATTATCCCCAC | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 4.61 |
994 | 2196 | 2.427095 | GTGCTTGTCAATTATCCCCACC | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
995 | 2197 | 1.676006 | GCTTGTCAATTATCCCCACCG | 59.324 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
996 | 2198 | 2.297701 | CTTGTCAATTATCCCCACCGG | 58.702 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
1398 | 2660 | 2.094659 | CAAGCACACCTACGCCGAG | 61.095 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
1815 | 3143 | 8.594881 | ACTACAAACAGAGTAACAAGAATGAG | 57.405 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
1824 | 3152 | 1.222936 | CAAGAATGAGGAGGCGGCT | 59.777 | 57.895 | 13.09 | 13.09 | 0.00 | 5.52 |
1843 | 3180 | 1.741770 | GACGCGGCCAAGAATGAGT | 60.742 | 57.895 | 12.47 | 0.00 | 0.00 | 3.41 |
2017 | 3368 | 3.289076 | GACAGAAACAGCGTTTGTAAGC | 58.711 | 45.455 | 10.61 | 0.00 | 39.73 | 3.09 |
2025 | 3376 | 1.952266 | GCGTTTGTAAGCGAGGGACG | 61.952 | 60.000 | 5.05 | 0.00 | 45.66 | 4.79 |
2069 | 3420 | 8.864069 | TGTCGATCTTAATTGATTTCTCTCTC | 57.136 | 34.615 | 0.00 | 0.00 | 0.00 | 3.20 |
2164 | 3515 | 6.162079 | TCGAGCATTTTTCATGGCAAATTAA | 58.838 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2168 | 3519 | 8.168790 | AGCATTTTTCATGGCAAATTAAGTTT | 57.831 | 26.923 | 0.00 | 0.00 | 0.00 | 2.66 |
2193 | 3544 | 4.698304 | TCGGGATGACAAATTTAGTTGACC | 59.302 | 41.667 | 0.00 | 0.00 | 32.59 | 4.02 |
2214 | 3568 | 4.202398 | ACCAGCATGATAAATCCGTCTCAT | 60.202 | 41.667 | 0.00 | 0.00 | 39.69 | 2.90 |
2222 | 3577 | 9.390795 | CATGATAAATCCGTCTCATTTCATTTC | 57.609 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2238 | 3593 | 9.176181 | CATTTCATTTCTTTTTGCCAGAAAATG | 57.824 | 29.630 | 0.00 | 0.00 | 42.23 | 2.32 |
2247 | 3602 | 3.495124 | CCAGAAAATGGCCGTGTTG | 57.505 | 52.632 | 4.67 | 0.00 | 43.83 | 3.33 |
2258 | 3613 | 3.488363 | TGGCCGTGTTGGTAAACTAAAT | 58.512 | 40.909 | 0.00 | 0.00 | 41.21 | 1.40 |
2261 | 3616 | 5.533903 | TGGCCGTGTTGGTAAACTAAATTAA | 59.466 | 36.000 | 0.00 | 0.00 | 41.21 | 1.40 |
2264 | 3619 | 6.079120 | CCGTGTTGGTAAACTAAATTAACCG | 58.921 | 40.000 | 0.00 | 0.00 | 37.19 | 4.44 |
2275 | 3630 | 5.422145 | ACTAAATTAACCGTAATCGCACCT | 58.578 | 37.500 | 0.00 | 0.00 | 35.54 | 4.00 |
2277 | 3632 | 7.041107 | ACTAAATTAACCGTAATCGCACCTAA | 58.959 | 34.615 | 0.00 | 0.00 | 35.54 | 2.69 |
2279 | 3634 | 5.723492 | ATTAACCGTAATCGCACCTAAAC | 57.277 | 39.130 | 0.00 | 0.00 | 35.54 | 2.01 |
2283 | 3638 | 3.187022 | ACCGTAATCGCACCTAAACAAAC | 59.813 | 43.478 | 0.00 | 0.00 | 35.54 | 2.93 |
2288 | 3643 | 0.951558 | CGCACCTAAACAAACTGCCT | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2290 | 3645 | 2.159627 | CGCACCTAAACAAACTGCCTAG | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2306 | 3661 | 8.593492 | AACTGCCTAGAAAAACATCAAATTTC | 57.407 | 30.769 | 0.00 | 0.00 | 34.14 | 2.17 |
2307 | 3662 | 6.863126 | ACTGCCTAGAAAAACATCAAATTTCG | 59.137 | 34.615 | 0.00 | 0.00 | 37.95 | 3.46 |
2312 | 3667 | 5.919196 | AGAAAAACATCAAATTTCGCATGC | 58.081 | 33.333 | 7.91 | 7.91 | 37.95 | 4.06 |
2327 | 3735 | 3.554324 | TCGCATGCCTAAAAATCTACGTC | 59.446 | 43.478 | 13.15 | 0.00 | 0.00 | 4.34 |
2379 | 3788 | 9.304731 | GATATTATTGAATATGCGGTTACCGTA | 57.695 | 33.333 | 25.13 | 21.67 | 46.69 | 4.02 |
2380 | 3789 | 9.656040 | ATATTATTGAATATGCGGTTACCGTAA | 57.344 | 29.630 | 25.13 | 14.26 | 45.67 | 3.18 |
2575 | 3988 | 9.462606 | AATTTTAGGCTGTTTTATGCTAGTACT | 57.537 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
2628 | 4184 | 4.353383 | ACCACTTTTGTCTCCTTCCTAC | 57.647 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2629 | 4185 | 3.714798 | ACCACTTTTGTCTCCTTCCTACA | 59.285 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2630 | 4186 | 4.351111 | ACCACTTTTGTCTCCTTCCTACAT | 59.649 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2631 | 4187 | 5.546499 | ACCACTTTTGTCTCCTTCCTACATA | 59.454 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2632 | 4188 | 6.109359 | CCACTTTTGTCTCCTTCCTACATAG | 58.891 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
2636 | 4192 | 7.453752 | ACTTTTGTCTCCTTCCTACATAGTACA | 59.546 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2706 | 4291 | 2.677875 | CCCTCAACCTTGGCTGCC | 60.678 | 66.667 | 12.87 | 12.87 | 0.00 | 4.85 |
2766 | 4355 | 1.382420 | AGCTAGCTGCCTGCCTACT | 60.382 | 57.895 | 18.57 | 0.00 | 44.23 | 2.57 |
2875 | 4467 | 6.576185 | CCATTCCCAATTCAGTTCTATTTGG | 58.424 | 40.000 | 0.00 | 0.00 | 37.23 | 3.28 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 6.707290 | TCAGTTTATTGCTACTGCCTTCTTA | 58.293 | 36.000 | 0.00 | 0.00 | 41.16 | 2.10 |
1 | 2 | 5.560724 | TCAGTTTATTGCTACTGCCTTCTT | 58.439 | 37.500 | 0.00 | 0.00 | 41.16 | 2.52 |
2 | 3 | 5.165961 | TCAGTTTATTGCTACTGCCTTCT | 57.834 | 39.130 | 0.00 | 0.00 | 41.16 | 2.85 |
3 | 4 | 5.631992 | GTTCAGTTTATTGCTACTGCCTTC | 58.368 | 41.667 | 0.00 | 0.00 | 41.16 | 3.46 |
4 | 5 | 4.154195 | CGTTCAGTTTATTGCTACTGCCTT | 59.846 | 41.667 | 0.00 | 0.00 | 41.16 | 4.35 |
5 | 6 | 3.684788 | CGTTCAGTTTATTGCTACTGCCT | 59.315 | 43.478 | 0.00 | 0.00 | 41.16 | 4.75 |
6 | 7 | 3.682858 | TCGTTCAGTTTATTGCTACTGCC | 59.317 | 43.478 | 0.00 | 0.00 | 41.16 | 4.85 |
7 | 8 | 4.921470 | TCGTTCAGTTTATTGCTACTGC | 57.079 | 40.909 | 0.00 | 0.00 | 41.16 | 4.40 |
8 | 9 | 6.647212 | TGATCGTTCAGTTTATTGCTACTG | 57.353 | 37.500 | 0.00 | 0.00 | 42.41 | 2.74 |
9 | 10 | 8.982685 | CATATGATCGTTCAGTTTATTGCTACT | 58.017 | 33.333 | 0.00 | 0.00 | 34.73 | 2.57 |
10 | 11 | 7.742089 | GCATATGATCGTTCAGTTTATTGCTAC | 59.258 | 37.037 | 6.97 | 0.00 | 34.73 | 3.58 |
11 | 12 | 7.657354 | AGCATATGATCGTTCAGTTTATTGCTA | 59.343 | 33.333 | 6.97 | 0.00 | 34.73 | 3.49 |
12 | 13 | 6.484643 | AGCATATGATCGTTCAGTTTATTGCT | 59.515 | 34.615 | 6.97 | 6.94 | 34.73 | 3.91 |
13 | 14 | 6.662616 | AGCATATGATCGTTCAGTTTATTGC | 58.337 | 36.000 | 6.97 | 5.10 | 34.73 | 3.56 |
14 | 15 | 9.750882 | CATAGCATATGATCGTTCAGTTTATTG | 57.249 | 33.333 | 6.97 | 0.00 | 34.73 | 1.90 |
15 | 16 | 8.446273 | GCATAGCATATGATCGTTCAGTTTATT | 58.554 | 33.333 | 6.97 | 0.00 | 34.73 | 1.40 |
16 | 17 | 7.821359 | AGCATAGCATATGATCGTTCAGTTTAT | 59.179 | 33.333 | 6.97 | 0.00 | 34.73 | 1.40 |
17 | 18 | 7.154656 | AGCATAGCATATGATCGTTCAGTTTA | 58.845 | 34.615 | 6.97 | 0.00 | 34.73 | 2.01 |
18 | 19 | 5.994054 | AGCATAGCATATGATCGTTCAGTTT | 59.006 | 36.000 | 6.97 | 0.00 | 34.73 | 2.66 |
19 | 20 | 5.545588 | AGCATAGCATATGATCGTTCAGTT | 58.454 | 37.500 | 6.97 | 0.00 | 34.73 | 3.16 |
20 | 21 | 5.144692 | AGCATAGCATATGATCGTTCAGT | 57.855 | 39.130 | 6.97 | 0.00 | 34.73 | 3.41 |
21 | 22 | 6.587608 | TGTTAGCATAGCATATGATCGTTCAG | 59.412 | 38.462 | 6.97 | 0.00 | 34.73 | 3.02 |
22 | 23 | 6.454795 | TGTTAGCATAGCATATGATCGTTCA | 58.545 | 36.000 | 6.97 | 0.00 | 36.00 | 3.18 |
23 | 24 | 6.808704 | TCTGTTAGCATAGCATATGATCGTTC | 59.191 | 38.462 | 6.97 | 0.00 | 29.25 | 3.95 |
24 | 25 | 6.691508 | TCTGTTAGCATAGCATATGATCGTT | 58.308 | 36.000 | 6.97 | 0.00 | 29.25 | 3.85 |
25 | 26 | 6.272822 | TCTGTTAGCATAGCATATGATCGT | 57.727 | 37.500 | 6.97 | 0.00 | 29.25 | 3.73 |
26 | 27 | 6.200475 | CCATCTGTTAGCATAGCATATGATCG | 59.800 | 42.308 | 6.97 | 0.00 | 38.18 | 3.69 |
27 | 28 | 6.482641 | CCCATCTGTTAGCATAGCATATGATC | 59.517 | 42.308 | 6.97 | 0.00 | 38.18 | 2.92 |
28 | 29 | 6.069789 | ACCCATCTGTTAGCATAGCATATGAT | 60.070 | 38.462 | 6.97 | 1.82 | 38.18 | 2.45 |
29 | 30 | 5.249163 | ACCCATCTGTTAGCATAGCATATGA | 59.751 | 40.000 | 6.97 | 0.00 | 38.18 | 2.15 |
30 | 31 | 5.494724 | ACCCATCTGTTAGCATAGCATATG | 58.505 | 41.667 | 0.00 | 0.00 | 36.56 | 1.78 |
31 | 32 | 5.486775 | AGACCCATCTGTTAGCATAGCATAT | 59.513 | 40.000 | 0.00 | 0.00 | 32.29 | 1.78 |
32 | 33 | 4.840680 | AGACCCATCTGTTAGCATAGCATA | 59.159 | 41.667 | 0.00 | 0.00 | 32.29 | 3.14 |
33 | 34 | 3.649981 | AGACCCATCTGTTAGCATAGCAT | 59.350 | 43.478 | 0.00 | 0.00 | 32.29 | 3.79 |
34 | 35 | 3.041211 | AGACCCATCTGTTAGCATAGCA | 58.959 | 45.455 | 0.00 | 0.00 | 32.29 | 3.49 |
35 | 36 | 3.760580 | AGACCCATCTGTTAGCATAGC | 57.239 | 47.619 | 0.00 | 0.00 | 32.29 | 2.97 |
36 | 37 | 5.028549 | ACAAGACCCATCTGTTAGCATAG | 57.971 | 43.478 | 0.00 | 0.00 | 34.48 | 2.23 |
37 | 38 | 4.141711 | GGACAAGACCCATCTGTTAGCATA | 60.142 | 45.833 | 0.00 | 0.00 | 34.48 | 3.14 |
38 | 39 | 3.370953 | GGACAAGACCCATCTGTTAGCAT | 60.371 | 47.826 | 0.00 | 0.00 | 34.48 | 3.79 |
39 | 40 | 2.027192 | GGACAAGACCCATCTGTTAGCA | 60.027 | 50.000 | 0.00 | 0.00 | 34.48 | 3.49 |
40 | 41 | 2.027192 | TGGACAAGACCCATCTGTTAGC | 60.027 | 50.000 | 0.00 | 0.00 | 34.48 | 3.09 |
41 | 42 | 3.981071 | TGGACAAGACCCATCTGTTAG | 57.019 | 47.619 | 0.00 | 0.00 | 34.48 | 2.34 |
48 | 49 | 2.108075 | TGTTGTGATGGACAAGACCCAT | 59.892 | 45.455 | 0.00 | 0.00 | 45.46 | 4.00 |
49 | 50 | 1.492599 | TGTTGTGATGGACAAGACCCA | 59.507 | 47.619 | 0.00 | 0.00 | 45.46 | 4.51 |
50 | 51 | 2.270352 | TGTTGTGATGGACAAGACCC | 57.730 | 50.000 | 0.00 | 0.00 | 45.46 | 4.46 |
51 | 52 | 4.074970 | AGAATGTTGTGATGGACAAGACC | 58.925 | 43.478 | 0.00 | 0.00 | 45.46 | 3.85 |
52 | 53 | 4.154918 | GGAGAATGTTGTGATGGACAAGAC | 59.845 | 45.833 | 0.00 | 0.00 | 45.46 | 3.01 |
53 | 54 | 4.042062 | AGGAGAATGTTGTGATGGACAAGA | 59.958 | 41.667 | 0.00 | 0.00 | 45.46 | 3.02 |
54 | 55 | 4.330250 | AGGAGAATGTTGTGATGGACAAG | 58.670 | 43.478 | 0.00 | 0.00 | 45.46 | 3.16 |
55 | 56 | 4.371624 | AGGAGAATGTTGTGATGGACAA | 57.628 | 40.909 | 0.00 | 0.00 | 42.55 | 3.18 |
56 | 57 | 5.497464 | TTAGGAGAATGTTGTGATGGACA | 57.503 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
57 | 58 | 6.115446 | TCATTAGGAGAATGTTGTGATGGAC | 58.885 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
58 | 59 | 6.312141 | TCATTAGGAGAATGTTGTGATGGA | 57.688 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
59 | 60 | 6.544931 | ACATCATTAGGAGAATGTTGTGATGG | 59.455 | 38.462 | 14.25 | 0.62 | 43.50 | 3.51 |
60 | 61 | 7.563888 | ACATCATTAGGAGAATGTTGTGATG | 57.436 | 36.000 | 11.34 | 9.67 | 44.29 | 3.07 |
64 | 65 | 6.769822 | GGATCACATCATTAGGAGAATGTTGT | 59.230 | 38.462 | 7.75 | 7.75 | 39.69 | 3.32 |
65 | 66 | 6.206243 | GGGATCACATCATTAGGAGAATGTTG | 59.794 | 42.308 | 0.00 | 6.75 | 34.92 | 3.33 |
66 | 67 | 6.302269 | GGGATCACATCATTAGGAGAATGTT | 58.698 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
67 | 68 | 5.512060 | CGGGATCACATCATTAGGAGAATGT | 60.512 | 44.000 | 0.00 | 0.00 | 0.00 | 2.71 |
68 | 69 | 4.934001 | CGGGATCACATCATTAGGAGAATG | 59.066 | 45.833 | 0.00 | 0.00 | 0.00 | 2.67 |
69 | 70 | 4.594920 | ACGGGATCACATCATTAGGAGAAT | 59.405 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
70 | 71 | 3.967326 | ACGGGATCACATCATTAGGAGAA | 59.033 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
71 | 72 | 3.576861 | ACGGGATCACATCATTAGGAGA | 58.423 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
72 | 73 | 4.342862 | AACGGGATCACATCATTAGGAG | 57.657 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
73 | 74 | 5.542251 | TGATAACGGGATCACATCATTAGGA | 59.458 | 40.000 | 0.00 | 0.00 | 30.75 | 2.94 |
74 | 75 | 5.793817 | TGATAACGGGATCACATCATTAGG | 58.206 | 41.667 | 0.00 | 0.00 | 30.75 | 2.69 |
75 | 76 | 7.728847 | TTTGATAACGGGATCACATCATTAG | 57.271 | 36.000 | 0.00 | 0.00 | 35.56 | 1.73 |
76 | 77 | 7.936301 | TCATTTGATAACGGGATCACATCATTA | 59.064 | 33.333 | 0.00 | 0.00 | 35.56 | 1.90 |
77 | 78 | 6.772233 | TCATTTGATAACGGGATCACATCATT | 59.228 | 34.615 | 0.00 | 0.00 | 35.56 | 2.57 |
78 | 79 | 6.205464 | GTCATTTGATAACGGGATCACATCAT | 59.795 | 38.462 | 0.00 | 0.00 | 35.56 | 2.45 |
79 | 80 | 5.527214 | GTCATTTGATAACGGGATCACATCA | 59.473 | 40.000 | 0.00 | 0.00 | 35.56 | 3.07 |
80 | 81 | 5.527214 | TGTCATTTGATAACGGGATCACATC | 59.473 | 40.000 | 0.00 | 0.00 | 35.56 | 3.06 |
81 | 82 | 5.436175 | TGTCATTTGATAACGGGATCACAT | 58.564 | 37.500 | 0.00 | 0.00 | 35.56 | 3.21 |
82 | 83 | 4.837972 | TGTCATTTGATAACGGGATCACA | 58.162 | 39.130 | 0.00 | 0.00 | 35.56 | 3.58 |
83 | 84 | 5.354234 | AGTTGTCATTTGATAACGGGATCAC | 59.646 | 40.000 | 12.58 | 0.00 | 46.44 | 3.06 |
84 | 85 | 5.496556 | AGTTGTCATTTGATAACGGGATCA | 58.503 | 37.500 | 12.58 | 0.00 | 46.44 | 2.92 |
85 | 86 | 5.584649 | TGAGTTGTCATTTGATAACGGGATC | 59.415 | 40.000 | 12.58 | 7.15 | 46.44 | 3.36 |
86 | 87 | 5.496556 | TGAGTTGTCATTTGATAACGGGAT | 58.503 | 37.500 | 12.58 | 0.00 | 46.44 | 3.85 |
87 | 88 | 4.900684 | TGAGTTGTCATTTGATAACGGGA | 58.099 | 39.130 | 12.58 | 1.45 | 46.44 | 5.14 |
88 | 89 | 5.123820 | ACATGAGTTGTCATTTGATAACGGG | 59.876 | 40.000 | 12.58 | 7.68 | 46.44 | 5.28 |
89 | 90 | 6.182039 | ACATGAGTTGTCATTTGATAACGG | 57.818 | 37.500 | 12.58 | 7.94 | 46.44 | 4.44 |
102 | 103 | 8.324163 | GTTTTCTAACCATAGACATGAGTTGT | 57.676 | 34.615 | 0.00 | 0.00 | 42.79 | 3.32 |
122 | 123 | 9.124807 | CGTTATCAAAAGATGGTTAAGGTTTTC | 57.875 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
123 | 124 | 8.852135 | TCGTTATCAAAAGATGGTTAAGGTTTT | 58.148 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
124 | 125 | 8.398878 | TCGTTATCAAAAGATGGTTAAGGTTT | 57.601 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
125 | 126 | 7.361799 | GCTCGTTATCAAAAGATGGTTAAGGTT | 60.362 | 37.037 | 0.00 | 0.00 | 0.00 | 3.50 |
126 | 127 | 6.093633 | GCTCGTTATCAAAAGATGGTTAAGGT | 59.906 | 38.462 | 0.00 | 0.00 | 0.00 | 3.50 |
127 | 128 | 6.316390 | AGCTCGTTATCAAAAGATGGTTAAGG | 59.684 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
128 | 129 | 7.308782 | AGCTCGTTATCAAAAGATGGTTAAG | 57.691 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
129 | 130 | 8.038944 | ACTAGCTCGTTATCAAAAGATGGTTAA | 58.961 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
130 | 131 | 7.553334 | ACTAGCTCGTTATCAAAAGATGGTTA | 58.447 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
131 | 132 | 6.407202 | ACTAGCTCGTTATCAAAAGATGGTT | 58.593 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
132 | 133 | 5.978814 | ACTAGCTCGTTATCAAAAGATGGT | 58.021 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
133 | 134 | 6.276847 | AGACTAGCTCGTTATCAAAAGATGG | 58.723 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
134 | 135 | 8.132362 | ACTAGACTAGCTCGTTATCAAAAGATG | 58.868 | 37.037 | 9.52 | 0.00 | 0.00 | 2.90 |
135 | 136 | 8.228035 | ACTAGACTAGCTCGTTATCAAAAGAT | 57.772 | 34.615 | 9.52 | 0.00 | 0.00 | 2.40 |
136 | 137 | 7.627298 | ACTAGACTAGCTCGTTATCAAAAGA | 57.373 | 36.000 | 9.52 | 0.00 | 0.00 | 2.52 |
137 | 138 | 8.828644 | TCTACTAGACTAGCTCGTTATCAAAAG | 58.171 | 37.037 | 9.52 | 0.00 | 0.00 | 2.27 |
138 | 139 | 8.728337 | TCTACTAGACTAGCTCGTTATCAAAA | 57.272 | 34.615 | 9.52 | 0.00 | 0.00 | 2.44 |
139 | 140 | 7.441760 | CCTCTACTAGACTAGCTCGTTATCAAA | 59.558 | 40.741 | 9.52 | 0.00 | 0.00 | 2.69 |
140 | 141 | 6.930164 | CCTCTACTAGACTAGCTCGTTATCAA | 59.070 | 42.308 | 9.52 | 0.00 | 0.00 | 2.57 |
141 | 142 | 6.457355 | CCTCTACTAGACTAGCTCGTTATCA | 58.543 | 44.000 | 9.52 | 0.00 | 0.00 | 2.15 |
142 | 143 | 5.349543 | GCCTCTACTAGACTAGCTCGTTATC | 59.650 | 48.000 | 9.52 | 0.00 | 0.00 | 1.75 |
143 | 144 | 5.012354 | AGCCTCTACTAGACTAGCTCGTTAT | 59.988 | 44.000 | 9.52 | 0.00 | 0.00 | 1.89 |
144 | 145 | 4.344679 | AGCCTCTACTAGACTAGCTCGTTA | 59.655 | 45.833 | 9.52 | 0.00 | 0.00 | 3.18 |
145 | 146 | 3.135167 | AGCCTCTACTAGACTAGCTCGTT | 59.865 | 47.826 | 9.52 | 0.00 | 0.00 | 3.85 |
146 | 147 | 2.701951 | AGCCTCTACTAGACTAGCTCGT | 59.298 | 50.000 | 9.52 | 0.00 | 0.00 | 4.18 |
147 | 148 | 3.396260 | AGCCTCTACTAGACTAGCTCG | 57.604 | 52.381 | 9.52 | 0.00 | 0.00 | 5.03 |
148 | 149 | 5.861727 | AGTAAGCCTCTACTAGACTAGCTC | 58.138 | 45.833 | 9.52 | 0.00 | 30.13 | 4.09 |
149 | 150 | 5.899631 | AGTAAGCCTCTACTAGACTAGCT | 57.100 | 43.478 | 9.52 | 0.00 | 30.13 | 3.32 |
156 | 157 | 5.065235 | GTGTCCCTAGTAAGCCTCTACTAG | 58.935 | 50.000 | 14.24 | 14.24 | 45.92 | 2.57 |
157 | 158 | 4.444022 | CGTGTCCCTAGTAAGCCTCTACTA | 60.444 | 50.000 | 0.00 | 0.00 | 34.03 | 1.82 |
158 | 159 | 3.684981 | CGTGTCCCTAGTAAGCCTCTACT | 60.685 | 52.174 | 0.00 | 0.00 | 36.16 | 2.57 |
159 | 160 | 2.617774 | CGTGTCCCTAGTAAGCCTCTAC | 59.382 | 54.545 | 0.00 | 0.00 | 0.00 | 2.59 |
160 | 161 | 2.422519 | CCGTGTCCCTAGTAAGCCTCTA | 60.423 | 54.545 | 0.00 | 0.00 | 0.00 | 2.43 |
161 | 162 | 1.685491 | CCGTGTCCCTAGTAAGCCTCT | 60.685 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
162 | 163 | 0.745468 | CCGTGTCCCTAGTAAGCCTC | 59.255 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
163 | 164 | 0.040794 | ACCGTGTCCCTAGTAAGCCT | 59.959 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
164 | 165 | 1.767759 | TACCGTGTCCCTAGTAAGCC | 58.232 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
165 | 166 | 4.117685 | CAAATACCGTGTCCCTAGTAAGC | 58.882 | 47.826 | 0.00 | 0.00 | 0.00 | 3.09 |
166 | 167 | 5.334724 | ACAAATACCGTGTCCCTAGTAAG | 57.665 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
167 | 168 | 5.743636 | AACAAATACCGTGTCCCTAGTAA | 57.256 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
168 | 169 | 5.743636 | AAACAAATACCGTGTCCCTAGTA | 57.256 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
169 | 170 | 4.628963 | AAACAAATACCGTGTCCCTAGT | 57.371 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
170 | 171 | 6.110707 | ACATAAACAAATACCGTGTCCCTAG | 58.889 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
171 | 172 | 6.052405 | ACATAAACAAATACCGTGTCCCTA | 57.948 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
172 | 173 | 4.913784 | ACATAAACAAATACCGTGTCCCT | 58.086 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
173 | 174 | 6.017687 | GGATACATAAACAAATACCGTGTCCC | 60.018 | 42.308 | 0.00 | 0.00 | 29.76 | 4.46 |
174 | 175 | 6.539464 | TGGATACATAAACAAATACCGTGTCC | 59.461 | 38.462 | 0.00 | 0.00 | 46.17 | 4.02 |
175 | 176 | 7.542534 | TGGATACATAAACAAATACCGTGTC | 57.457 | 36.000 | 0.00 | 0.00 | 46.17 | 3.67 |
193 | 194 | 8.120465 | CGGAAACTTAAATACATGTGTGGATAC | 58.880 | 37.037 | 9.11 | 0.00 | 0.00 | 2.24 |
194 | 195 | 7.281324 | CCGGAAACTTAAATACATGTGTGGATA | 59.719 | 37.037 | 9.11 | 0.00 | 0.00 | 2.59 |
195 | 196 | 6.094881 | CCGGAAACTTAAATACATGTGTGGAT | 59.905 | 38.462 | 9.11 | 0.00 | 0.00 | 3.41 |
196 | 197 | 5.413213 | CCGGAAACTTAAATACATGTGTGGA | 59.587 | 40.000 | 9.11 | 0.00 | 0.00 | 4.02 |
197 | 198 | 5.182380 | ACCGGAAACTTAAATACATGTGTGG | 59.818 | 40.000 | 9.46 | 0.00 | 0.00 | 4.17 |
198 | 199 | 6.072948 | TGACCGGAAACTTAAATACATGTGTG | 60.073 | 38.462 | 9.46 | 0.00 | 0.00 | 3.82 |
199 | 200 | 5.998981 | TGACCGGAAACTTAAATACATGTGT | 59.001 | 36.000 | 9.46 | 0.00 | 0.00 | 3.72 |
200 | 201 | 6.489127 | TGACCGGAAACTTAAATACATGTG | 57.511 | 37.500 | 9.46 | 0.00 | 0.00 | 3.21 |
201 | 202 | 7.696992 | ATTGACCGGAAACTTAAATACATGT | 57.303 | 32.000 | 9.46 | 2.69 | 0.00 | 3.21 |
202 | 203 | 8.670135 | TGTATTGACCGGAAACTTAAATACATG | 58.330 | 33.333 | 9.46 | 0.00 | 35.32 | 3.21 |
203 | 204 | 8.795842 | TGTATTGACCGGAAACTTAAATACAT | 57.204 | 30.769 | 9.46 | 0.00 | 35.32 | 2.29 |
204 | 205 | 8.618702 | TTGTATTGACCGGAAACTTAAATACA | 57.381 | 30.769 | 9.46 | 8.16 | 37.29 | 2.29 |
207 | 208 | 9.020731 | AGAATTGTATTGACCGGAAACTTAAAT | 57.979 | 29.630 | 9.46 | 0.00 | 0.00 | 1.40 |
208 | 209 | 8.398878 | AGAATTGTATTGACCGGAAACTTAAA | 57.601 | 30.769 | 9.46 | 0.00 | 0.00 | 1.52 |
209 | 210 | 7.989416 | AGAATTGTATTGACCGGAAACTTAA | 57.011 | 32.000 | 9.46 | 0.00 | 0.00 | 1.85 |
210 | 211 | 8.316214 | ACTAGAATTGTATTGACCGGAAACTTA | 58.684 | 33.333 | 9.46 | 0.00 | 0.00 | 2.24 |
211 | 212 | 7.166167 | ACTAGAATTGTATTGACCGGAAACTT | 58.834 | 34.615 | 9.46 | 0.00 | 0.00 | 2.66 |
212 | 213 | 6.708285 | ACTAGAATTGTATTGACCGGAAACT | 58.292 | 36.000 | 9.46 | 0.00 | 0.00 | 2.66 |
213 | 214 | 6.980051 | ACTAGAATTGTATTGACCGGAAAC | 57.020 | 37.500 | 9.46 | 0.00 | 0.00 | 2.78 |
214 | 215 | 8.479689 | TCATACTAGAATTGTATTGACCGGAAA | 58.520 | 33.333 | 9.46 | 1.81 | 0.00 | 3.13 |
215 | 216 | 8.014070 | TCATACTAGAATTGTATTGACCGGAA | 57.986 | 34.615 | 9.46 | 0.00 | 0.00 | 4.30 |
216 | 217 | 7.591421 | TCATACTAGAATTGTATTGACCGGA | 57.409 | 36.000 | 9.46 | 0.00 | 0.00 | 5.14 |
217 | 218 | 8.833231 | ATTCATACTAGAATTGTATTGACCGG | 57.167 | 34.615 | 0.00 | 0.00 | 34.70 | 5.28 |
272 | 273 | 9.918630 | GAGGACATAATAAAGCGGTTATTACTA | 57.081 | 33.333 | 14.24 | 0.00 | 43.97 | 1.82 |
273 | 274 | 8.648693 | AGAGGACATAATAAAGCGGTTATTACT | 58.351 | 33.333 | 14.24 | 9.19 | 43.97 | 2.24 |
274 | 275 | 8.828688 | AGAGGACATAATAAAGCGGTTATTAC | 57.171 | 34.615 | 14.24 | 5.98 | 43.97 | 1.89 |
276 | 277 | 8.095169 | CCTAGAGGACATAATAAAGCGGTTATT | 58.905 | 37.037 | 0.00 | 11.59 | 40.33 | 1.40 |
277 | 278 | 7.310485 | CCCTAGAGGACATAATAAAGCGGTTAT | 60.310 | 40.741 | 0.00 | 0.00 | 38.24 | 1.89 |
278 | 279 | 6.014840 | CCCTAGAGGACATAATAAAGCGGTTA | 60.015 | 42.308 | 0.00 | 0.00 | 38.24 | 2.85 |
279 | 280 | 5.221661 | CCCTAGAGGACATAATAAAGCGGTT | 60.222 | 44.000 | 0.00 | 0.00 | 38.24 | 4.44 |
280 | 281 | 4.283722 | CCCTAGAGGACATAATAAAGCGGT | 59.716 | 45.833 | 0.00 | 0.00 | 38.24 | 5.68 |
281 | 282 | 4.822026 | CCCTAGAGGACATAATAAAGCGG | 58.178 | 47.826 | 0.00 | 0.00 | 38.24 | 5.52 |
282 | 283 | 4.246458 | GCCCTAGAGGACATAATAAAGCG | 58.754 | 47.826 | 0.00 | 0.00 | 38.24 | 4.68 |
283 | 284 | 5.228945 | TGCCCTAGAGGACATAATAAAGC | 57.771 | 43.478 | 0.00 | 0.00 | 38.24 | 3.51 |
284 | 285 | 9.965902 | AAATATGCCCTAGAGGACATAATAAAG | 57.034 | 33.333 | 8.45 | 0.00 | 37.82 | 1.85 |
285 | 286 | 9.959721 | GAAATATGCCCTAGAGGACATAATAAA | 57.040 | 33.333 | 8.45 | 0.00 | 37.82 | 1.40 |
286 | 287 | 8.548877 | GGAAATATGCCCTAGAGGACATAATAA | 58.451 | 37.037 | 8.45 | 0.00 | 37.82 | 1.40 |
287 | 288 | 7.682459 | TGGAAATATGCCCTAGAGGACATAATA | 59.318 | 37.037 | 8.45 | 0.00 | 37.82 | 0.98 |
288 | 289 | 6.505344 | TGGAAATATGCCCTAGAGGACATAAT | 59.495 | 38.462 | 8.45 | 0.00 | 37.82 | 1.28 |
289 | 290 | 5.849475 | TGGAAATATGCCCTAGAGGACATAA | 59.151 | 40.000 | 8.45 | 0.00 | 37.82 | 1.90 |
290 | 291 | 5.411493 | TGGAAATATGCCCTAGAGGACATA | 58.589 | 41.667 | 7.00 | 7.00 | 38.31 | 2.29 |
291 | 292 | 4.242811 | TGGAAATATGCCCTAGAGGACAT | 58.757 | 43.478 | 2.73 | 2.73 | 38.24 | 3.06 |
292 | 293 | 3.664320 | TGGAAATATGCCCTAGAGGACA | 58.336 | 45.455 | 0.00 | 0.00 | 38.24 | 4.02 |
293 | 294 | 4.141482 | TGTTGGAAATATGCCCTAGAGGAC | 60.141 | 45.833 | 0.00 | 0.00 | 38.24 | 3.85 |
294 | 295 | 4.044308 | TGTTGGAAATATGCCCTAGAGGA | 58.956 | 43.478 | 0.00 | 0.00 | 38.24 | 3.71 |
295 | 296 | 4.437682 | TGTTGGAAATATGCCCTAGAGG | 57.562 | 45.455 | 0.00 | 0.00 | 39.47 | 3.69 |
296 | 297 | 5.474876 | GGATTGTTGGAAATATGCCCTAGAG | 59.525 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
297 | 298 | 5.385198 | GGATTGTTGGAAATATGCCCTAGA | 58.615 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
298 | 299 | 4.524328 | GGGATTGTTGGAAATATGCCCTAG | 59.476 | 45.833 | 0.00 | 0.00 | 29.23 | 3.02 |
299 | 300 | 4.479158 | GGGATTGTTGGAAATATGCCCTA | 58.521 | 43.478 | 0.00 | 0.00 | 29.23 | 3.53 |
300 | 301 | 3.308401 | GGGATTGTTGGAAATATGCCCT | 58.692 | 45.455 | 0.00 | 0.00 | 29.23 | 5.19 |
301 | 302 | 2.368548 | GGGGATTGTTGGAAATATGCCC | 59.631 | 50.000 | 0.00 | 0.00 | 41.52 | 5.36 |
302 | 303 | 3.037549 | TGGGGATTGTTGGAAATATGCC | 58.962 | 45.455 | 0.00 | 0.00 | 32.86 | 4.40 |
303 | 304 | 3.181466 | GGTGGGGATTGTTGGAAATATGC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.14 |
304 | 305 | 3.387699 | GGGTGGGGATTGTTGGAAATATG | 59.612 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
305 | 306 | 3.653164 | GGGTGGGGATTGTTGGAAATAT | 58.347 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
306 | 307 | 2.621929 | CGGGTGGGGATTGTTGGAAATA | 60.622 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
307 | 308 | 1.894978 | CGGGTGGGGATTGTTGGAAAT | 60.895 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
308 | 309 | 0.540830 | CGGGTGGGGATTGTTGGAAA | 60.541 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
309 | 310 | 1.075836 | CGGGTGGGGATTGTTGGAA | 59.924 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
310 | 311 | 2.760477 | CGGGTGGGGATTGTTGGA | 59.240 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
311 | 312 | 3.068064 | GCGGGTGGGGATTGTTGG | 61.068 | 66.667 | 0.00 | 0.00 | 0.00 | 3.77 |
312 | 313 | 2.282816 | TGCGGGTGGGGATTGTTG | 60.283 | 61.111 | 0.00 | 0.00 | 0.00 | 3.33 |
313 | 314 | 2.282887 | GTGCGGGTGGGGATTGTT | 60.283 | 61.111 | 0.00 | 0.00 | 0.00 | 2.83 |
314 | 315 | 2.840753 | AAGTGCGGGTGGGGATTGT | 61.841 | 57.895 | 0.00 | 0.00 | 0.00 | 2.71 |
315 | 316 | 2.035626 | AAGTGCGGGTGGGGATTG | 59.964 | 61.111 | 0.00 | 0.00 | 0.00 | 2.67 |
316 | 317 | 2.035626 | CAAGTGCGGGTGGGGATT | 59.964 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
394 | 395 | 2.484241 | CCGAGCATGAGACATGATGGAA | 60.484 | 50.000 | 14.65 | 0.00 | 0.00 | 3.53 |
401 | 402 | 2.107750 | CGCCCGAGCATGAGACAT | 59.892 | 61.111 | 0.00 | 0.00 | 39.83 | 3.06 |
499 | 500 | 1.041726 | CAAACGTTCGAAATGCCACG | 58.958 | 50.000 | 0.00 | 0.61 | 38.62 | 4.94 |
575 | 576 | 6.433093 | GCTCAAAACTACCATCCTCCTAAAAA | 59.567 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
604 | 605 | 8.969260 | AGAATAGCATGACATTTTCTGACATA | 57.031 | 30.769 | 0.00 | 0.00 | 38.02 | 2.29 |
663 | 664 | 3.060607 | GCATTTGCGAACGTTTTGATGTT | 60.061 | 39.130 | 0.46 | 0.00 | 0.00 | 2.71 |
674 | 675 | 2.212900 | GAGGGGTGGCATTTGCGAAC | 62.213 | 60.000 | 0.00 | 0.00 | 43.26 | 3.95 |
768 | 1928 | 1.375853 | TTGCGCATACATCCAGGCAC | 61.376 | 55.000 | 12.75 | 0.00 | 0.00 | 5.01 |
852 | 2051 | 5.673337 | TTGTTTCTCATGTGTGCTTAGTC | 57.327 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
868 | 2067 | 5.014808 | AGGGCAAATATGATGCTTGTTTC | 57.985 | 39.130 | 12.09 | 0.00 | 43.34 | 2.78 |
960 | 2162 | 1.155889 | CAAGCACTATGGTCGTTGCA | 58.844 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
996 | 2198 | 2.202878 | TTGCTAGACGCCATCGGC | 60.203 | 61.111 | 0.00 | 0.00 | 46.75 | 5.54 |
1527 | 2846 | 2.280797 | TTCTCGGCGTGCTGCTTT | 60.281 | 55.556 | 6.85 | 0.00 | 45.43 | 3.51 |
1578 | 2900 | 2.521708 | AAGCCCTTGCCGTTGCTT | 60.522 | 55.556 | 0.00 | 0.00 | 39.12 | 3.91 |
1824 | 3152 | 1.741401 | CTCATTCTTGGCCGCGTCA | 60.741 | 57.895 | 4.92 | 0.00 | 0.00 | 4.35 |
1950 | 3297 | 1.869767 | GAAAGACCATGGCTATCGCAG | 59.130 | 52.381 | 13.04 | 0.00 | 38.10 | 5.18 |
2017 | 3368 | 0.530744 | TGTCAAGGAATCGTCCCTCG | 59.469 | 55.000 | 0.00 | 0.00 | 46.30 | 4.63 |
2025 | 3376 | 6.611381 | TCGACATGAAAAATGTCAAGGAATC | 58.389 | 36.000 | 16.33 | 0.00 | 46.38 | 2.52 |
2069 | 3420 | 2.348666 | CGCTGTCCGATAAACCTCAAAG | 59.651 | 50.000 | 0.00 | 0.00 | 40.02 | 2.77 |
2128 | 3479 | 0.248743 | ATGCTCGATTTGCCAATGCG | 60.249 | 50.000 | 0.00 | 0.00 | 41.78 | 4.73 |
2164 | 3515 | 8.458843 | CAACTAAATTTGTCATCCCGATAAACT | 58.541 | 33.333 | 0.00 | 0.00 | 37.52 | 2.66 |
2168 | 3519 | 6.540914 | GGTCAACTAAATTTGTCATCCCGATA | 59.459 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
2170 | 3521 | 4.698304 | GGTCAACTAAATTTGTCATCCCGA | 59.302 | 41.667 | 0.00 | 0.00 | 0.00 | 5.14 |
2172 | 3523 | 5.622233 | GCTGGTCAACTAAATTTGTCATCCC | 60.622 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2193 | 3544 | 5.936686 | AATGAGACGGATTTATCATGCTG | 57.063 | 39.130 | 0.00 | 0.00 | 32.85 | 4.41 |
2214 | 3568 | 7.705214 | CCATTTTCTGGCAAAAAGAAATGAAA | 58.295 | 30.769 | 15.88 | 5.79 | 41.86 | 2.69 |
2238 | 3593 | 4.508461 | AATTTAGTTTACCAACACGGCC | 57.492 | 40.909 | 0.00 | 0.00 | 39.03 | 6.13 |
2239 | 3594 | 5.858049 | GGTTAATTTAGTTTACCAACACGGC | 59.142 | 40.000 | 0.00 | 0.00 | 38.93 | 5.68 |
2240 | 3595 | 6.079120 | CGGTTAATTTAGTTTACCAACACGG | 58.921 | 40.000 | 0.00 | 0.00 | 39.02 | 4.94 |
2245 | 3600 | 8.174422 | GCGATTACGGTTAATTTAGTTTACCAA | 58.826 | 33.333 | 0.00 | 0.00 | 39.02 | 3.67 |
2247 | 3602 | 7.635973 | GTGCGATTACGGTTAATTTAGTTTACC | 59.364 | 37.037 | 0.00 | 0.00 | 40.15 | 2.85 |
2258 | 3613 | 4.564041 | TGTTTAGGTGCGATTACGGTTAA | 58.436 | 39.130 | 0.00 | 0.00 | 40.15 | 2.01 |
2261 | 3616 | 2.747396 | TGTTTAGGTGCGATTACGGT | 57.253 | 45.000 | 0.00 | 0.00 | 40.15 | 4.83 |
2264 | 3619 | 4.156182 | GCAGTTTGTTTAGGTGCGATTAC | 58.844 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
2275 | 3630 | 8.001881 | TGATGTTTTTCTAGGCAGTTTGTTTA | 57.998 | 30.769 | 0.00 | 0.00 | 0.00 | 2.01 |
2277 | 3632 | 6.463995 | TGATGTTTTTCTAGGCAGTTTGTT | 57.536 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2279 | 3634 | 7.951530 | ATTTGATGTTTTTCTAGGCAGTTTG | 57.048 | 32.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2283 | 3638 | 6.183360 | GCGAAATTTGATGTTTTTCTAGGCAG | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 4.85 |
2288 | 3643 | 6.090628 | GGCATGCGAAATTTGATGTTTTTCTA | 59.909 | 34.615 | 12.44 | 0.00 | 0.00 | 2.10 |
2290 | 3645 | 5.081394 | GGCATGCGAAATTTGATGTTTTTC | 58.919 | 37.500 | 12.44 | 0.00 | 0.00 | 2.29 |
2306 | 3661 | 3.555956 | AGACGTAGATTTTTAGGCATGCG | 59.444 | 43.478 | 12.44 | 0.00 | 0.00 | 4.73 |
2307 | 3662 | 5.485662 | AAGACGTAGATTTTTAGGCATGC | 57.514 | 39.130 | 9.90 | 9.90 | 0.00 | 4.06 |
2379 | 3788 | 1.558294 | TGCTGGTCATGATGCTCTCTT | 59.442 | 47.619 | 15.70 | 0.00 | 0.00 | 2.85 |
2380 | 3789 | 1.139256 | CTGCTGGTCATGATGCTCTCT | 59.861 | 52.381 | 15.70 | 0.00 | 0.00 | 3.10 |
2422 | 3831 | 2.307496 | TGGCTTGAACAACCCATCAT | 57.693 | 45.000 | 0.00 | 0.00 | 0.00 | 2.45 |
2565 | 3975 | 4.036498 | ACGCGAAGTTCATAGTACTAGCAT | 59.964 | 41.667 | 15.93 | 0.00 | 32.43 | 3.79 |
2574 | 3987 | 1.324736 | GGCAAGACGCGAAGTTCATAG | 59.675 | 52.381 | 15.93 | 0.00 | 43.84 | 2.23 |
2575 | 3988 | 1.067142 | AGGCAAGACGCGAAGTTCATA | 60.067 | 47.619 | 15.93 | 0.00 | 43.84 | 2.15 |
2576 | 3989 | 0.320771 | AGGCAAGACGCGAAGTTCAT | 60.321 | 50.000 | 15.93 | 0.00 | 43.84 | 2.57 |
2628 | 4184 | 9.717892 | CAGTATGTACAACAGTACTGTACTATG | 57.282 | 37.037 | 28.13 | 23.11 | 46.14 | 2.23 |
2706 | 4291 | 0.882042 | GCCTGACCATCATGGCTACG | 60.882 | 60.000 | 2.52 | 0.00 | 42.67 | 3.51 |
2748 | 4333 | 1.382420 | AGTAGGCAGGCAGCTAGCT | 60.382 | 57.895 | 12.68 | 12.68 | 44.79 | 3.32 |
2749 | 4334 | 1.227497 | CAGTAGGCAGGCAGCTAGC | 60.227 | 63.158 | 6.62 | 6.62 | 44.79 | 3.42 |
2750 | 4335 | 1.445095 | CCAGTAGGCAGGCAGCTAG | 59.555 | 63.158 | 0.81 | 0.00 | 44.79 | 3.42 |
2751 | 4336 | 3.634202 | CCAGTAGGCAGGCAGCTA | 58.366 | 61.111 | 0.81 | 0.00 | 44.79 | 3.32 |
2875 | 4467 | 4.508124 | CGAGTGCACTAGATATTTTCCCAC | 59.492 | 45.833 | 21.73 | 0.47 | 0.00 | 4.61 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.