Multiple sequence alignment - TraesCS4D01G321400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G321400 chr4D 100.000 9961 0 0 1 9961 484039013 484048973 0.000000e+00 18395.0
1 TraesCS4D01G321400 chr4D 88.945 1194 131 1 7750 8942 484044635 484045828 0.000000e+00 1472.0
2 TraesCS4D01G321400 chr4D 88.945 1194 131 1 5623 6816 484046762 484047954 0.000000e+00 1472.0
3 TraesCS4D01G321400 chr4D 84.503 1510 191 23 5629 7126 484043060 484044538 0.000000e+00 1452.0
4 TraesCS4D01G321400 chr4D 84.503 1510 191 23 4048 5526 484044641 484046138 0.000000e+00 1452.0
5 TraesCS4D01G321400 chr4D 86.146 1191 160 5 7756 8943 484043060 484044248 0.000000e+00 1280.0
6 TraesCS4D01G321400 chr4D 86.146 1191 160 5 4048 5236 484046768 484047955 0.000000e+00 1280.0
7 TraesCS4D01G321400 chr4D 88.930 271 25 4 226 492 156155461 156155730 7.460000e-86 329.0
8 TraesCS4D01G321400 chr4D 96.053 76 3 0 9636 9711 484048351 484048426 3.780000e-24 124.0
9 TraesCS4D01G321400 chr4D 96.053 76 3 0 9339 9414 484048648 484048723 3.780000e-24 124.0
10 TraesCS4D01G321400 chr4D 87.273 110 11 3 480 589 120289769 120289663 1.360000e-23 122.0
11 TraesCS4D01G321400 chr4D 88.660 97 11 0 3272 3368 437508885 437508981 1.760000e-22 119.0
12 TraesCS4D01G321400 chr4D 89.535 86 7 1 506 591 503144174 503144257 3.800000e-19 108.0
13 TraesCS4D01G321400 chr4D 85.577 104 9 5 478 579 508590602 508590701 4.920000e-18 104.0
14 TraesCS4D01G321400 chr4D 85.000 100 15 0 3269 3368 109272507 109272606 1.770000e-17 102.0
15 TraesCS4D01G321400 chr4D 91.837 49 4 0 7324 7372 252178752 252178800 1.800000e-07 69.4
16 TraesCS4D01G321400 chr4B 95.898 3535 124 12 5623 9141 615251118 615254647 0.000000e+00 5705.0
17 TraesCS4D01G321400 chr4B 92.100 1924 123 17 3713 5610 615248586 615250506 0.000000e+00 2684.0
18 TraesCS4D01G321400 chr4B 90.789 1824 94 35 592 2370 615245152 615246946 0.000000e+00 2370.0
19 TraesCS4D01G321400 chr4B 89.623 1195 123 1 7749 8942 615251117 615252311 0.000000e+00 1519.0
20 TraesCS4D01G321400 chr4B 84.914 1518 196 22 5622 7121 615248916 615250418 0.000000e+00 1504.0
21 TraesCS4D01G321400 chr4B 84.169 1516 191 21 4048 5526 615251124 615252627 0.000000e+00 1424.0
22 TraesCS4D01G321400 chr4B 88.023 1194 142 1 5623 6816 615253256 615254448 0.000000e+00 1411.0
23 TraesCS4D01G321400 chr4B 85.547 1197 168 5 7750 8943 615248917 615250111 0.000000e+00 1247.0
24 TraesCS4D01G321400 chr4B 85.378 1190 172 2 4048 5236 615253261 615254449 0.000000e+00 1232.0
25 TraesCS4D01G321400 chr4B 88.445 926 82 16 2171 3079 615246970 615247887 0.000000e+00 1094.0
26 TraesCS4D01G321400 chr4B 94.068 236 14 0 261 496 50464361 50464596 9.510000e-95 359.0
27 TraesCS4D01G321400 chr4B 84.404 327 30 11 3415 3720 615248078 615248404 1.630000e-77 302.0
28 TraesCS4D01G321400 chr4B 87.755 245 19 4 9636 9876 615254862 615255099 9.860000e-70 276.0
29 TraesCS4D01G321400 chr4B 91.613 155 10 2 9260 9414 615254786 615254937 2.820000e-50 211.0
30 TraesCS4D01G321400 chr4B 85.714 112 13 2 480 591 233207781 233207889 2.270000e-21 115.0
31 TraesCS4D01G321400 chr4B 85.714 112 13 2 480 591 440841666 440841774 2.270000e-21 115.0
32 TraesCS4D01G321400 chr4B 85.714 112 13 2 480 591 528937267 528937375 2.270000e-21 115.0
33 TraesCS4D01G321400 chr4B 93.671 79 2 1 1 76 615245050 615245128 2.270000e-21 115.0
34 TraesCS4D01G321400 chr4B 90.588 85 7 1 3288 3372 63847049 63847132 2.940000e-20 111.0
35 TraesCS4D01G321400 chr4B 86.139 101 14 0 3277 3377 107553628 107553528 1.060000e-19 110.0
36 TraesCS4D01G321400 chr4B 86.869 99 11 2 3283 3380 282239874 282239777 1.060000e-19 110.0
37 TraesCS4D01G321400 chr4B 83.636 110 16 2 3263 3371 586464032 586463924 1.770000e-17 102.0
38 TraesCS4D01G321400 chr4B 81.818 110 18 2 3544 3653 553506089 553505982 3.830000e-14 91.6
39 TraesCS4D01G321400 chr4B 86.111 72 9 1 3582 3653 553481146 553481076 1.070000e-09 76.8
40 TraesCS4D01G321400 chr4B 91.837 49 4 0 7324 7372 269169243 269169195 1.800000e-07 69.4
41 TraesCS4D01G321400 chr5A 96.538 1762 54 6 7383 9141 664265901 664267658 0.000000e+00 2909.0
42 TraesCS4D01G321400 chr5A 90.544 2094 163 22 3366 5438 664261487 664263566 0.000000e+00 2737.0
43 TraesCS4D01G321400 chr5A 94.823 1584 71 2 5612 7184 664264325 664265908 0.000000e+00 2460.0
44 TraesCS4D01G321400 chr5A 92.416 1635 68 32 592 2195 664258826 664260435 0.000000e+00 2281.0
45 TraesCS4D01G321400 chr5A 89.043 1223 132 2 7722 8942 664264307 664265529 0.000000e+00 1515.0
46 TraesCS4D01G321400 chr5A 88.945 1194 132 0 5623 6816 664266267 664267460 0.000000e+00 1474.0
47 TraesCS4D01G321400 chr5A 84.631 1516 189 29 4048 5526 664264342 664265850 0.000000e+00 1469.0
48 TraesCS4D01G321400 chr5A 89.942 1034 78 18 2212 3228 664260425 664261449 0.000000e+00 1310.0
49 TraesCS4D01G321400 chr5A 85.846 1194 167 2 5645 6837 664262181 664263373 0.000000e+00 1267.0
50 TraesCS4D01G321400 chr5A 85.558 1191 168 4 4048 5236 664266273 664267461 0.000000e+00 1243.0
51 TraesCS4D01G321400 chr5A 84.170 1175 182 4 7771 8943 664262181 664263353 0.000000e+00 1136.0
52 TraesCS4D01G321400 chr5A 90.036 281 25 2 9636 9914 664267836 664268115 2.640000e-95 361.0
53 TraesCS4D01G321400 chr5A 84.916 358 48 5 2781 3135 664261053 664261407 3.420000e-94 357.0
54 TraesCS4D01G321400 chr5A 91.760 267 7 3 9161 9413 664267645 664267910 3.420000e-94 357.0
55 TraesCS4D01G321400 chr5A 87.031 293 23 8 217 494 693141417 693141125 5.810000e-82 316.0
56 TraesCS4D01G321400 chr5A 86.620 284 23 8 225 493 31133998 31133715 5.850000e-77 300.0
57 TraesCS4D01G321400 chr5A 91.613 155 10 1 75 229 693552165 693552014 2.820000e-50 211.0
58 TraesCS4D01G321400 chr5A 85.204 196 27 2 2781 2975 664261206 664261400 6.100000e-47 200.0
59 TraesCS4D01G321400 chr5A 83.140 172 16 10 6930 7088 664263467 664263638 2.900000e-30 145.0
60 TraesCS4D01G321400 chr6D 83.215 1555 193 30 3962 5470 472944919 472943387 0.000000e+00 1363.0
61 TraesCS4D01G321400 chr6D 82.660 1609 204 34 4063 5610 472966584 472964990 0.000000e+00 1356.0
62 TraesCS4D01G321400 chr6D 86.870 1211 146 8 4048 5256 472963252 472962053 0.000000e+00 1343.0
63 TraesCS4D01G321400 chr6D 82.882 1478 210 18 5645 7091 472966583 472965118 0.000000e+00 1288.0
64 TraesCS4D01G321400 chr6D 82.012 1451 212 23 5645 7068 472944815 472943387 0.000000e+00 1188.0
65 TraesCS4D01G321400 chr6D 84.245 1206 175 8 5638 6840 472963243 472962050 0.000000e+00 1160.0
66 TraesCS4D01G321400 chr6D 84.030 1196 180 4 5629 6823 472941223 472940038 0.000000e+00 1140.0
67 TraesCS4D01G321400 chr6D 84.095 1182 172 9 7765 8942 472963243 472962074 0.000000e+00 1127.0
68 TraesCS4D01G321400 chr6D 84.000 1175 173 8 7771 8942 472966583 472965421 0.000000e+00 1114.0
69 TraesCS4D01G321400 chr6D 83.361 1190 178 13 7759 8942 472941220 472940045 0.000000e+00 1083.0
70 TraesCS4D01G321400 chr6D 82.653 1176 187 10 7771 8942 472944815 472943653 0.000000e+00 1026.0
71 TraesCS4D01G321400 chr6D 80.115 1222 221 13 7755 8969 472978438 472977232 0.000000e+00 891.0
72 TraesCS4D01G321400 chr6D 89.773 88 9 0 3280 3367 4268696 4268783 8.180000e-21 113.0
73 TraesCS4D01G321400 chr6D 86.667 90 10 2 502 591 152402998 152403085 2.290000e-16 99.0
74 TraesCS4D01G321400 chr6D 82.883 111 16 2 480 590 10748546 10748439 8.240000e-16 97.1
75 TraesCS4D01G321400 chr6B 85.523 1271 159 16 3995 5256 718317437 718316183 0.000000e+00 1304.0
76 TraesCS4D01G321400 chr6B 85.112 1209 167 7 4050 5256 718313490 718312293 0.000000e+00 1223.0
77 TraesCS4D01G321400 chr6B 81.991 1477 221 23 5649 7093 718334301 718332838 0.000000e+00 1212.0
78 TraesCS4D01G321400 chr6B 83.745 1175 172 12 7773 8942 718334303 718333143 0.000000e+00 1094.0
79 TraesCS4D01G321400 chr6B 83.418 1176 178 10 7771 8942 718317366 718316204 0.000000e+00 1075.0
80 TraesCS4D01G321400 chr6B 82.826 1182 181 16 7767 8941 718313481 718312315 0.000000e+00 1038.0
81 TraesCS4D01G321400 chr6B 93.377 151 6 2 75 225 280858699 280858845 4.680000e-53 220.0
82 TraesCS4D01G321400 chr6B 91.720 157 6 4 75 228 559377149 559377301 2.820000e-50 211.0
83 TraesCS4D01G321400 chr6B 87.000 100 12 1 3277 3376 270366039 270366137 2.940000e-20 111.0
84 TraesCS4D01G321400 chr6B 90.000 60 4 2 7315 7372 240046238 240046297 1.070000e-09 76.8
85 TraesCS4D01G321400 chr6B 89.796 49 5 0 3582 3630 116576779 116576827 8.350000e-06 63.9
86 TraesCS4D01G321400 chr6A 86.195 1188 153 6 4063 5249 616880322 616881499 0.000000e+00 1275.0
87 TraesCS4D01G321400 chr6A 84.383 1191 173 6 5652 6840 616861827 616863006 0.000000e+00 1157.0
88 TraesCS4D01G321400 chr6A 83.816 1174 177 6 7771 8942 616861820 616862982 0.000000e+00 1103.0
89 TraesCS4D01G321400 chr6A 83.263 1177 180 10 7771 8943 616880323 616881486 0.000000e+00 1066.0
90 TraesCS4D01G321400 chr6A 89.773 88 9 0 3280 3367 607960034 607959947 8.180000e-21 113.0
91 TraesCS4D01G321400 chr6A 91.667 60 3 2 7315 7372 183366567 183366508 2.310000e-11 82.4
92 TraesCS4D01G321400 chr6A 89.091 55 5 1 7315 7368 97594731 97594677 6.460000e-07 67.6
93 TraesCS4D01G321400 chr6A 83.607 61 10 0 3591 3651 448643688 448643748 3.890000e-04 58.4
94 TraesCS4D01G321400 chr3D 94.894 235 11 1 261 495 116246415 116246182 5.680000e-97 366.0
95 TraesCS4D01G321400 chr3D 93.966 232 11 3 261 490 51477237 51477007 2.060000e-91 348.0
96 TraesCS4D01G321400 chr3D 91.613 155 10 1 75 229 101300618 101300769 2.820000e-50 211.0
97 TraesCS4D01G321400 chr3D 87.500 112 11 3 480 591 577359245 577359137 1.050000e-24 126.0
98 TraesCS4D01G321400 chr3D 90.625 64 5 1 7310 7372 26617389 26617452 6.410000e-12 84.2
99 TraesCS4D01G321400 chr3D 90.164 61 4 2 7307 7365 136481663 136481723 2.980000e-10 78.7
100 TraesCS4D01G321400 chr3D 78.030 132 19 8 7249 7372 37059241 37059370 3.860000e-09 75.0
101 TraesCS4D01G321400 chr2D 95.154 227 11 0 261 487 125684085 125684311 9.510000e-95 359.0
102 TraesCS4D01G321400 chr3A 90.909 275 10 6 228 487 430763427 430763701 1.230000e-93 355.0
103 TraesCS4D01G321400 chr3A 91.139 158 8 4 75 229 266564386 266564232 1.010000e-49 209.0
104 TraesCS4D01G321400 chr3A 87.611 113 11 2 480 592 432884570 432884461 2.920000e-25 128.0
105 TraesCS4D01G321400 chr3A 87.736 106 11 2 486 591 287644995 287645098 1.360000e-23 122.0
106 TraesCS4D01G321400 chr3A 86.607 112 12 2 480 591 402280988 402281096 4.890000e-23 121.0
107 TraesCS4D01G321400 chr1D 94.714 227 12 0 261 487 418272305 418272079 4.430000e-93 353.0
108 TraesCS4D01G321400 chr1D 85.714 112 13 2 480 591 481920787 481920679 2.270000e-21 115.0
109 TraesCS4D01G321400 chr1D 85.455 110 11 4 3274 3379 222908641 222908749 1.060000e-19 110.0
110 TraesCS4D01G321400 chr1D 87.234 94 11 1 3278 3370 436100588 436100495 1.370000e-18 106.0
111 TraesCS4D01G321400 chr1D 90.323 62 4 2 7310 7369 350639826 350639887 8.290000e-11 80.5
112 TraesCS4D01G321400 chr5B 94.690 226 11 1 263 487 710611371 710611596 5.730000e-92 350.0
113 TraesCS4D01G321400 chr5B 87.108 287 22 8 218 489 669691262 669690976 2.700000e-80 311.0
114 TraesCS4D01G321400 chr5B 86.538 104 12 2 3268 3371 429030706 429030605 8.180000e-21 113.0
115 TraesCS4D01G321400 chr5B 86.869 99 11 2 3283 3380 253207161 253207064 1.060000e-19 110.0
116 TraesCS4D01G321400 chr7B 93.562 233 13 2 261 492 25890702 25890933 7.410000e-91 346.0
117 TraesCS4D01G321400 chr7B 86.486 111 12 2 480 590 727390386 727390279 1.760000e-22 119.0
118 TraesCS4D01G321400 chr7B 88.298 94 11 0 3283 3376 661996477 661996384 8.180000e-21 113.0
119 TraesCS4D01G321400 chr2B 86.139 303 26 11 217 504 768133602 768133903 7.510000e-81 313.0
120 TraesCS4D01G321400 chr2B 86.458 288 24 8 217 489 90445066 90444779 1.630000e-77 302.0
121 TraesCS4D01G321400 chr2B 91.503 153 10 1 75 227 790239621 790239770 3.650000e-49 207.0
122 TraesCS4D01G321400 chr2B 90.426 94 9 0 3274 3367 478114367 478114460 3.780000e-24 124.0
123 TraesCS4D01G321400 chr2A 83.660 306 32 10 202 489 61970733 61971038 1.270000e-68 272.0
124 TraesCS4D01G321400 chr2A 91.772 158 6 4 75 229 749456082 749456235 7.840000e-51 213.0
125 TraesCS4D01G321400 chr7A 84.502 271 26 9 209 464 164783937 164783668 4.620000e-63 254.0
126 TraesCS4D01G321400 chr4A 92.357 157 7 3 75 229 39445058 39445211 1.680000e-52 219.0
127 TraesCS4D01G321400 chr4A 90.164 61 4 2 7310 7369 725789018 725788959 2.980000e-10 78.7
128 TraesCS4D01G321400 chr4A 93.023 43 1 1 2272 2314 700446097 700446137 3.000000e-05 62.1
129 TraesCS4D01G321400 chr3B 91.720 157 8 2 75 229 174024145 174024298 7.840000e-51 213.0
130 TraesCS4D01G321400 chr3B 88.393 112 10 3 480 591 769649947 769649839 2.260000e-26 132.0
131 TraesCS4D01G321400 chr3B 91.209 91 7 1 3277 3367 6673714 6673803 1.360000e-23 122.0
132 TraesCS4D01G321400 chr3B 86.607 112 12 2 480 591 72793446 72793554 4.890000e-23 121.0
133 TraesCS4D01G321400 chr1B 85.027 187 11 9 213 382 666549422 666549236 3.700000e-39 174.0
134 TraesCS4D01G321400 chr1B 90.164 61 5 1 7310 7369 473243016 473243076 2.980000e-10 78.7
135 TraesCS4D01G321400 chr5D 87.500 112 11 2 480 591 561573559 561573667 1.050000e-24 126.0
136 TraesCS4D01G321400 chr5D 89.655 58 4 2 7310 7365 486562562 486562619 1.390000e-08 73.1
137 TraesCS4D01G321400 chr1A 87.273 110 10 3 482 591 442451262 442451157 1.360000e-23 122.0
138 TraesCS4D01G321400 chr1A 83.929 112 15 2 480 591 220250897 220251005 4.920000e-18 104.0
139 TraesCS4D01G321400 chr1A 84.071 113 13 4 480 591 293744848 293744740 4.920000e-18 104.0
140 TraesCS4D01G321400 chr1A 85.294 102 13 2 3273 3372 296213705 296213806 4.920000e-18 104.0
141 TraesCS4D01G321400 chr1A 90.323 62 4 2 7310 7369 451570452 451570513 8.290000e-11 80.5
142 TraesCS4D01G321400 chr7D 90.909 88 8 0 3280 3367 252265281 252265194 1.760000e-22 119.0
143 TraesCS4D01G321400 chr7D 86.735 98 12 1 3283 3380 635426653 635426557 3.800000e-19 108.0
144 TraesCS4D01G321400 chrUn 90.588 85 8 0 3283 3367 62690554 62690470 8.180000e-21 113.0
145 TraesCS4D01G321400 chrUn 88.889 90 9 1 3282 3371 297037505 297037417 1.060000e-19 110.0
146 TraesCS4D01G321400 chrUn 88.889 90 9 1 3282 3371 301355110 301355022 1.060000e-19 110.0
147 TraesCS4D01G321400 chrUn 89.412 85 9 0 3283 3367 475637857 475637773 3.800000e-19 108.0
148 TraesCS4D01G321400 chrUn 86.458 96 11 2 3274 3368 94846963 94847057 4.920000e-18 104.0
149 TraesCS4D01G321400 chrUn 87.640 89 11 0 3279 3367 163394524 163394436 4.920000e-18 104.0
150 TraesCS4D01G321400 chrUn 88.372 86 10 0 3283 3368 224653393 224653308 4.920000e-18 104.0
151 TraesCS4D01G321400 chrUn 87.640 89 11 0 3279 3367 325472536 325472448 4.920000e-18 104.0
152 TraesCS4D01G321400 chrUn 87.640 89 11 0 3279 3367 384522786 384522698 4.920000e-18 104.0
153 TraesCS4D01G321400 chrUn 87.640 89 11 0 3279 3367 386040245 386040333 4.920000e-18 104.0
154 TraesCS4D01G321400 chrUn 85.567 97 13 1 3277 3373 62663396 62663491 6.370000e-17 100.0
155 TraesCS4D01G321400 chrUn 81.081 111 16 4 480 589 75270416 75270310 6.410000e-12 84.2
156 TraesCS4D01G321400 chrUn 91.525 59 3 2 7315 7372 38777397 38777340 8.290000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G321400 chr4D 484039013 484048973 9960 False 18395.000000 18395 100.000000 1 9961 1 chr4D.!!$F5 9960
1 TraesCS4D01G321400 chr4D 484043060 484048723 5663 False 1082.000000 1472 88.911750 4048 9711 8 chr4D.!!$F8 5663
2 TraesCS4D01G321400 chr4B 615245050 615255099 10049 False 1506.714286 5705 88.737786 1 9876 14 chr4B.!!$F6 9875
3 TraesCS4D01G321400 chr5A 664258826 664268115 9289 False 1326.312500 2909 88.594500 592 9914 16 chr5A.!!$F1 9322
4 TraesCS4D01G321400 chr6D 472962050 472966584 4534 True 1231.333333 1356 84.125333 4048 8942 6 chr6D.!!$R4 4894
5 TraesCS4D01G321400 chr6D 472940038 472944919 4881 True 1160.000000 1363 83.054200 3962 8942 5 chr6D.!!$R3 4980
6 TraesCS4D01G321400 chr6D 472977232 472978438 1206 True 891.000000 891 80.115000 7755 8969 1 chr6D.!!$R2 1214
7 TraesCS4D01G321400 chr6B 718312293 718317437 5144 True 1160.000000 1304 84.219750 3995 8942 4 chr6B.!!$R1 4947
8 TraesCS4D01G321400 chr6B 718332838 718334303 1465 True 1153.000000 1212 82.868000 5649 8942 2 chr6B.!!$R2 3293
9 TraesCS4D01G321400 chr6A 616880322 616881499 1177 False 1170.500000 1275 84.729000 4063 8943 2 chr6A.!!$F3 4880
10 TraesCS4D01G321400 chr6A 616861820 616863006 1186 False 1130.000000 1157 84.099500 5652 8942 2 chr6A.!!$F2 3290

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 350 1.065491 ACCATCACATAGCGCTTTCCA 60.065 47.619 18.68 0.00 0.00 3.53 F
1011 1025 0.522076 GCTGCGAGATGAAAAAGGCG 60.522 55.000 0.00 0.00 0.00 5.52 F
2965 3311 0.257039 CCACCTTCTCCCCCATCAAG 59.743 60.000 0.00 0.00 0.00 3.02 F
3681 4077 0.034337 TTGGACAGGCGGAGTAACAC 59.966 55.000 0.00 0.00 0.00 3.32 F
3689 4085 0.039256 GCGGAGTAACACACACGGTA 60.039 55.000 0.00 0.00 32.44 4.02 F
5354 5953 0.590195 CTGTGCAGAACTTGTGAGGC 59.410 55.000 0.00 0.00 0.00 4.70 F
6483 11868 0.728129 TGAACTCGTGCGACGTGATC 60.728 55.000 14.51 12.75 43.14 2.92 F
7627 13037 0.854705 AAACGCCGTTCTCGTGTAAC 59.145 50.000 1.60 0.00 40.36 2.50 F
8540 13954 0.178990 AGGTTGGCTTTGAGGTGGTC 60.179 55.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2061 2107 1.068954 CCGTTCTGCAGAGAAAAAGGC 60.069 52.381 17.43 0.84 40.00 4.35 R
2992 3338 0.032615 TGTGGGAAAAGGTGGTGCTT 60.033 50.000 0.00 0.00 0.00 3.91 R
3889 4478 2.014128 CGCATGGGAATTTAGGTCGTT 58.986 47.619 3.11 0.00 0.00 3.85 R
5525 6145 0.177604 CTCCTTGCTAGCCAGAGTGG 59.822 60.000 17.10 7.71 41.55 4.00 R
5658 11043 1.000938 CTTGACTTGCTTCTTGGTGCC 60.001 52.381 0.00 0.00 0.00 5.01 R
6921 12306 0.600255 CCGTTCTGCAGAGAAACGGT 60.600 55.000 34.81 0.00 42.17 4.83 R
8363 13777 0.108756 GGAGAAAGTCCCGGAAGTCG 60.109 60.000 0.73 0.00 39.88 4.18 R
8690 14104 2.125106 GACGCCCACCTCATGTCC 60.125 66.667 0.00 0.00 0.00 4.02 R
9708 15182 0.249699 TGTCGGAATTGCTGTCGTGT 60.250 50.000 0.00 0.00 0.00 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 94 3.384168 TGGTATAGCCACAATGGAGAGT 58.616 45.455 0.00 0.00 43.61 3.24
94 98 5.163343 GGTATAGCCACAATGGAGAGTAACA 60.163 44.000 0.00 0.00 40.96 2.41
95 99 5.636903 ATAGCCACAATGGAGAGTAACAT 57.363 39.130 0.00 0.00 40.96 2.71
97 101 4.770795 AGCCACAATGGAGAGTAACATAC 58.229 43.478 0.00 0.00 40.96 2.39
99 103 4.332819 GCCACAATGGAGAGTAACATACAC 59.667 45.833 0.00 0.00 40.96 2.90
101 105 6.629515 GCCACAATGGAGAGTAACATACACTA 60.630 42.308 0.00 0.00 40.96 2.74
103 107 7.363880 CCACAATGGAGAGTAACATACACTAGT 60.364 40.741 0.00 0.00 40.96 2.57
104 108 8.683615 CACAATGGAGAGTAACATACACTAGTA 58.316 37.037 0.00 0.00 29.62 1.82
107 111 8.818622 ATGGAGAGTAACATACACTAGTAACA 57.181 34.615 0.00 0.00 33.13 2.41
108 112 8.818622 TGGAGAGTAACATACACTAGTAACAT 57.181 34.615 0.00 0.00 33.13 2.71
109 113 9.910267 TGGAGAGTAACATACACTAGTAACATA 57.090 33.333 0.00 0.00 33.13 2.29
139 143 6.857777 TCGCTAGACTATGTTACTACCTTC 57.142 41.667 0.00 0.00 0.00 3.46
141 145 6.996879 TCGCTAGACTATGTTACTACCTTCAT 59.003 38.462 0.00 0.00 0.00 2.57
142 146 8.152898 TCGCTAGACTATGTTACTACCTTCATA 58.847 37.037 0.00 0.00 0.00 2.15
149 153 6.869206 ATGTTACTACCTTCATAGTGTGGT 57.131 37.500 0.00 0.00 36.09 4.16
151 155 7.966339 TGTTACTACCTTCATAGTGTGGTAT 57.034 36.000 0.00 0.00 36.09 2.73
152 156 8.004087 TGTTACTACCTTCATAGTGTGGTATC 57.996 38.462 0.00 0.00 36.09 2.24
153 157 7.616542 TGTTACTACCTTCATAGTGTGGTATCA 59.383 37.037 0.00 0.00 36.09 2.15
154 158 8.639761 GTTACTACCTTCATAGTGTGGTATCAT 58.360 37.037 0.00 0.00 36.09 2.45
156 160 4.708177 ACCTTCATAGTGTGGTATCATGC 58.292 43.478 0.00 0.00 0.00 4.06
162 166 6.179756 TCATAGTGTGGTATCATGCAAAGTT 58.820 36.000 0.00 0.00 0.00 2.66
163 167 6.658816 TCATAGTGTGGTATCATGCAAAGTTT 59.341 34.615 0.00 0.00 0.00 2.66
164 168 5.376854 AGTGTGGTATCATGCAAAGTTTC 57.623 39.130 0.00 0.00 0.00 2.78
168 172 6.646240 GTGTGGTATCATGCAAAGTTTCATTT 59.354 34.615 0.00 0.00 0.00 2.32
170 174 8.530311 TGTGGTATCATGCAAAGTTTCATTTAT 58.470 29.630 0.00 0.00 0.00 1.40
171 175 9.369904 GTGGTATCATGCAAAGTTTCATTTATT 57.630 29.630 0.00 0.00 0.00 1.40
198 202 9.935241 AGGTTATAGACTCATACTATTGCATTG 57.065 33.333 0.00 0.00 33.43 2.82
199 203 9.155975 GGTTATAGACTCATACTATTGCATTGG 57.844 37.037 0.00 0.00 33.43 3.16
202 206 5.615289 AGACTCATACTATTGCATTGGGAC 58.385 41.667 0.00 0.00 0.00 4.46
203 207 5.130975 AGACTCATACTATTGCATTGGGACA 59.869 40.000 0.00 0.00 0.00 4.02
204 208 5.945310 ACTCATACTATTGCATTGGGACAT 58.055 37.500 0.00 0.00 39.30 3.06
206 210 5.693961 TCATACTATTGCATTGGGACATGT 58.306 37.500 0.00 0.00 39.30 3.21
208 212 3.966979 ACTATTGCATTGGGACATGTGA 58.033 40.909 1.15 0.00 39.30 3.58
210 214 3.812156 ATTGCATTGGGACATGTGATG 57.188 42.857 1.15 3.48 39.30 3.07
213 217 3.694926 TGCATTGGGACATGTGATGTTA 58.305 40.909 1.15 0.00 45.03 2.41
215 219 3.443329 GCATTGGGACATGTGATGTTACA 59.557 43.478 1.15 0.00 45.03 2.41
217 221 4.365514 TTGGGACATGTGATGTTACAGT 57.634 40.909 1.15 0.00 45.03 3.55
219 223 5.491323 TGGGACATGTGATGTTACAGTAA 57.509 39.130 1.15 0.00 45.03 2.24
220 224 5.242434 TGGGACATGTGATGTTACAGTAAC 58.758 41.667 15.58 15.58 45.03 2.50
223 227 6.757010 GGGACATGTGATGTTACAGTAACTAG 59.243 42.308 21.56 8.25 45.03 2.57
225 229 6.936279 ACATGTGATGTTACAGTAACTAGCT 58.064 36.000 21.56 6.57 41.63 3.32
227 231 8.528643 ACATGTGATGTTACAGTAACTAGCTAA 58.471 33.333 21.56 3.59 41.63 3.09
228 232 9.025020 CATGTGATGTTACAGTAACTAGCTAAG 57.975 37.037 21.56 6.36 39.38 2.18
245 249 1.207791 AAGGCTGGTCATAGTGGGAG 58.792 55.000 0.00 0.00 0.00 4.30
247 251 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
248 252 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
250 254 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
251 255 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
256 260 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
258 262 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
260 264 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
261 265 9.139734 CATAGTGGGAGTAACATAGGTAGTAAA 57.860 37.037 0.00 0.00 0.00 2.01
263 267 6.097981 AGTGGGAGTAACATAGGTAGTAAAGC 59.902 42.308 0.00 0.00 0.00 3.51
272 276 8.879427 AACATAGGTAGTAAAGCAAAAAGGAT 57.121 30.769 0.00 0.00 0.00 3.24
274 278 8.107095 ACATAGGTAGTAAAGCAAAAAGGATGA 58.893 33.333 0.00 0.00 0.00 2.92
276 280 7.396540 AGGTAGTAAAGCAAAAAGGATGATG 57.603 36.000 0.00 0.00 0.00 3.07
277 281 6.948309 AGGTAGTAAAGCAAAAAGGATGATGT 59.052 34.615 0.00 0.00 0.00 3.06
278 282 7.029563 GGTAGTAAAGCAAAAAGGATGATGTG 58.970 38.462 0.00 0.00 0.00 3.21
279 283 6.655078 AGTAAAGCAAAAAGGATGATGTGT 57.345 33.333 0.00 0.00 0.00 3.72
281 285 5.534207 AAAGCAAAAAGGATGATGTGTCA 57.466 34.783 0.00 0.00 39.04 3.58
282 286 5.534207 AAGCAAAAAGGATGATGTGTCAA 57.466 34.783 0.00 0.00 38.01 3.18
285 289 5.769662 AGCAAAAAGGATGATGTGTCAAGTA 59.230 36.000 0.00 0.00 38.01 2.24
286 290 6.265196 AGCAAAAAGGATGATGTGTCAAGTAA 59.735 34.615 0.00 0.00 38.01 2.24
293 297 9.685276 AAGGATGATGTGTCAAGTAATTAATGA 57.315 29.630 0.00 0.00 38.01 2.57
294 298 9.334947 AGGATGATGTGTCAAGTAATTAATGAG 57.665 33.333 3.16 0.00 38.01 2.90
295 299 8.562892 GGATGATGTGTCAAGTAATTAATGAGG 58.437 37.037 3.16 0.00 38.01 3.86
296 300 9.330063 GATGATGTGTCAAGTAATTAATGAGGA 57.670 33.333 3.16 0.00 38.01 3.71
298 302 8.539544 TGATGTGTCAAGTAATTAATGAGGAGA 58.460 33.333 3.16 0.00 0.00 3.71
300 304 8.134202 TGTGTCAAGTAATTAATGAGGAGAGA 57.866 34.615 3.16 0.00 0.00 3.10
304 308 6.384015 TCAAGTAATTAATGAGGAGAGAGGCA 59.616 38.462 0.00 0.00 0.00 4.75
305 309 6.814954 AGTAATTAATGAGGAGAGAGGCAA 57.185 37.500 0.00 0.00 0.00 4.52
306 310 7.200434 AGTAATTAATGAGGAGAGAGGCAAA 57.800 36.000 0.00 0.00 0.00 3.68
308 312 8.938883 AGTAATTAATGAGGAGAGAGGCAAATA 58.061 33.333 0.00 0.00 0.00 1.40
309 313 9.213799 GTAATTAATGAGGAGAGAGGCAAATAG 57.786 37.037 0.00 0.00 0.00 1.73
311 315 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
312 316 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
316 320 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
318 322 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
319 323 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
339 343 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
342 346 3.260475 TGTTACCATCACATAGCGCTT 57.740 42.857 18.68 0.00 0.00 4.68
346 350 1.065491 ACCATCACATAGCGCTTTCCA 60.065 47.619 18.68 0.00 0.00 3.53
347 351 2.016318 CCATCACATAGCGCTTTCCAA 58.984 47.619 18.68 0.00 0.00 3.53
349 353 3.549423 CCATCACATAGCGCTTTCCAATG 60.549 47.826 18.68 15.83 0.00 2.82
351 355 1.132834 CACATAGCGCTTTCCAATGCA 59.867 47.619 18.68 0.00 0.00 3.96
352 356 1.818060 ACATAGCGCTTTCCAATGCAA 59.182 42.857 18.68 0.00 0.00 4.08
353 357 2.230992 ACATAGCGCTTTCCAATGCAAA 59.769 40.909 18.68 0.00 0.00 3.68
355 359 2.460757 AGCGCTTTCCAATGCAAAAT 57.539 40.000 2.64 0.00 0.00 1.82
356 360 2.070783 AGCGCTTTCCAATGCAAAATG 58.929 42.857 2.64 0.00 0.00 2.32
358 362 2.093152 GCGCTTTCCAATGCAAAATGAG 59.907 45.455 0.00 0.00 0.00 2.90
359 363 3.319755 CGCTTTCCAATGCAAAATGAGT 58.680 40.909 0.00 0.00 0.00 3.41
361 365 4.563061 GCTTTCCAATGCAAAATGAGTCT 58.437 39.130 0.00 0.00 0.00 3.24
362 366 5.619757 CGCTTTCCAATGCAAAATGAGTCTA 60.620 40.000 0.00 0.00 0.00 2.59
363 367 5.574443 GCTTTCCAATGCAAAATGAGTCTAC 59.426 40.000 0.00 0.00 0.00 2.59
364 368 6.647334 TTTCCAATGCAAAATGAGTCTACA 57.353 33.333 0.00 0.00 0.00 2.74
365 369 6.647334 TTCCAATGCAAAATGAGTCTACAA 57.353 33.333 0.00 0.00 0.00 2.41
366 370 6.647334 TCCAATGCAAAATGAGTCTACAAA 57.353 33.333 0.00 0.00 0.00 2.83
368 372 5.346822 CCAATGCAAAATGAGTCTACAAAGC 59.653 40.000 0.00 0.00 0.00 3.51
369 373 5.710513 ATGCAAAATGAGTCTACAAAGCA 57.289 34.783 0.00 0.00 0.00 3.91
370 374 5.512753 TGCAAAATGAGTCTACAAAGCAA 57.487 34.783 0.00 0.00 0.00 3.91
371 375 6.088016 TGCAAAATGAGTCTACAAAGCAAT 57.912 33.333 0.00 0.00 0.00 3.56
372 376 7.213216 TGCAAAATGAGTCTACAAAGCAATA 57.787 32.000 0.00 0.00 0.00 1.90
373 377 7.656412 TGCAAAATGAGTCTACAAAGCAATAA 58.344 30.769 0.00 0.00 0.00 1.40
380 384 8.846943 TGAGTCTACAAAGCAATAAATGAAGA 57.153 30.769 0.00 0.00 0.00 2.87
381 385 9.453572 TGAGTCTACAAAGCAATAAATGAAGAT 57.546 29.630 0.00 0.00 0.00 2.40
413 417 8.036575 TGTTATCACACTTATGTTAGTACCCAC 58.963 37.037 0.00 0.00 36.72 4.61
414 418 6.869206 ATCACACTTATGTTAGTACCCACT 57.131 37.500 0.00 0.00 36.72 4.00
415 419 7.966339 ATCACACTTATGTTAGTACCCACTA 57.034 36.000 0.00 0.00 36.72 2.74
416 420 7.966339 TCACACTTATGTTAGTACCCACTAT 57.034 36.000 0.00 0.00 36.72 2.12
418 422 7.616542 TCACACTTATGTTAGTACCCACTATGA 59.383 37.037 0.00 0.00 36.72 2.15
419 423 8.255206 CACACTTATGTTAGTACCCACTATGAA 58.745 37.037 0.00 0.00 36.72 2.57
420 424 8.475639 ACACTTATGTTAGTACCCACTATGAAG 58.524 37.037 0.00 0.00 37.12 3.02
422 426 7.622479 ACTTATGTTAGTACCCACTATGAAGGT 59.378 37.037 0.00 0.00 37.12 3.50
423 427 9.139734 CTTATGTTAGTACCCACTATGAAGGTA 57.860 37.037 0.00 0.00 37.12 3.08
424 428 7.598759 ATGTTAGTACCCACTATGAAGGTAG 57.401 40.000 0.00 0.00 37.12 3.18
425 429 6.496743 TGTTAGTACCCACTATGAAGGTAGT 58.503 40.000 0.00 0.00 41.58 2.73
426 430 7.642186 TGTTAGTACCCACTATGAAGGTAGTA 58.358 38.462 0.00 0.00 39.82 1.82
427 431 8.115384 TGTTAGTACCCACTATGAAGGTAGTAA 58.885 37.037 10.32 10.32 44.27 2.24
428 432 8.525290 TTAGTACCCACTATGAAGGTAGTAAC 57.475 38.462 10.32 0.00 42.80 2.50
429 433 6.496743 AGTACCCACTATGAAGGTAGTAACA 58.503 40.000 0.00 0.00 37.90 2.41
430 434 7.130775 AGTACCCACTATGAAGGTAGTAACAT 58.869 38.462 0.00 0.00 37.90 2.71
432 436 7.598759 ACCCACTATGAAGGTAGTAACATAG 57.401 40.000 0.00 0.00 44.14 2.23
433 437 7.359849 ACCCACTATGAAGGTAGTAACATAGA 58.640 38.462 16.37 0.00 42.41 1.98
434 438 7.287235 ACCCACTATGAAGGTAGTAACATAGAC 59.713 40.741 16.37 0.00 42.41 2.59
435 439 7.506261 CCCACTATGAAGGTAGTAACATAGACT 59.494 40.741 16.37 0.00 42.41 3.24
442 446 9.964354 TGAAGGTAGTAACATAGACTAGTAACA 57.036 33.333 0.00 0.00 30.08 2.41
445 449 9.917887 AGGTAGTAACATAGACTAGTAACATGT 57.082 33.333 0.00 3.02 30.08 3.21
446 450 9.947669 GGTAGTAACATAGACTAGTAACATGTG 57.052 37.037 14.07 5.18 30.08 3.21
447 451 9.448294 GTAGTAACATAGACTAGTAACATGTGC 57.552 37.037 14.07 11.16 30.08 4.57
448 452 8.063200 AGTAACATAGACTAGTAACATGTGCA 57.937 34.615 14.07 6.09 30.55 4.57
450 454 7.776933 AACATAGACTAGTAACATGTGCATG 57.223 36.000 14.07 10.31 44.15 4.06
465 469 7.312657 CATGTGCATGTCATTAGTCTAAGTT 57.687 36.000 4.13 0.00 34.23 2.66
467 471 7.827819 TGTGCATGTCATTAGTCTAAGTTAC 57.172 36.000 0.00 0.00 0.00 2.50
468 472 7.611770 TGTGCATGTCATTAGTCTAAGTTACT 58.388 34.615 0.00 0.00 0.00 2.24
469 473 7.759886 TGTGCATGTCATTAGTCTAAGTTACTC 59.240 37.037 0.00 0.00 0.00 2.59
470 474 7.222999 GTGCATGTCATTAGTCTAAGTTACTCC 59.777 40.741 0.00 0.00 0.00 3.85
472 476 6.786967 TGTCATTAGTCTAAGTTACTCCCC 57.213 41.667 0.00 0.00 0.00 4.81
473 477 6.258354 TGTCATTAGTCTAAGTTACTCCCCA 58.742 40.000 0.00 0.00 0.00 4.96
474 478 6.154021 TGTCATTAGTCTAAGTTACTCCCCAC 59.846 42.308 0.00 0.00 0.00 4.61
475 479 6.380560 GTCATTAGTCTAAGTTACTCCCCACT 59.619 42.308 0.00 0.00 0.00 4.00
477 481 8.287350 TCATTAGTCTAAGTTACTCCCCACTAT 58.713 37.037 0.00 0.00 0.00 2.12
479 483 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
481 485 5.892686 GTCTAAGTTACTCCCCACTATGACT 59.107 44.000 0.00 0.00 0.00 3.41
483 487 7.229106 GTCTAAGTTACTCCCCACTATGACTAG 59.771 44.444 0.00 0.00 0.00 2.57
484 488 4.216708 AGTTACTCCCCACTATGACTAGC 58.783 47.826 0.00 0.00 0.00 3.42
485 489 2.089600 ACTCCCCACTATGACTAGCC 57.910 55.000 0.00 0.00 0.00 3.93
486 490 1.576272 ACTCCCCACTATGACTAGCCT 59.424 52.381 0.00 0.00 0.00 4.58
490 494 3.206866 TCCCCACTATGACTAGCCTAAGT 59.793 47.826 0.00 0.00 0.00 2.24
491 495 3.574826 CCCCACTATGACTAGCCTAAGTC 59.425 52.174 4.86 4.86 45.10 3.01
500 504 4.496360 GACTAGCCTAAGTCACTGAAACC 58.504 47.826 6.59 0.00 44.41 3.27
501 505 3.901844 ACTAGCCTAAGTCACTGAAACCA 59.098 43.478 0.00 0.00 0.00 3.67
502 506 4.532521 ACTAGCCTAAGTCACTGAAACCAT 59.467 41.667 0.00 0.00 0.00 3.55
504 508 3.010420 GCCTAAGTCACTGAAACCATCC 58.990 50.000 0.00 0.00 0.00 3.51
505 509 3.610911 CCTAAGTCACTGAAACCATCCC 58.389 50.000 0.00 0.00 0.00 3.85
506 510 3.264450 CCTAAGTCACTGAAACCATCCCT 59.736 47.826 0.00 0.00 0.00 4.20
507 511 3.425162 AAGTCACTGAAACCATCCCTC 57.575 47.619 0.00 0.00 0.00 4.30
508 512 2.625639 AGTCACTGAAACCATCCCTCT 58.374 47.619 0.00 0.00 0.00 3.69
509 513 2.569404 AGTCACTGAAACCATCCCTCTC 59.431 50.000 0.00 0.00 0.00 3.20
510 514 1.909302 TCACTGAAACCATCCCTCTCC 59.091 52.381 0.00 0.00 0.00 3.71
511 515 1.912043 CACTGAAACCATCCCTCTCCT 59.088 52.381 0.00 0.00 0.00 3.69
512 516 2.093235 CACTGAAACCATCCCTCTCCTC 60.093 54.545 0.00 0.00 0.00 3.71
513 517 2.191400 CTGAAACCATCCCTCTCCTCA 58.809 52.381 0.00 0.00 0.00 3.86
514 518 2.776536 CTGAAACCATCCCTCTCCTCAT 59.223 50.000 0.00 0.00 0.00 2.90
516 520 4.370776 TGAAACCATCCCTCTCCTCATTA 58.629 43.478 0.00 0.00 0.00 1.90
517 521 4.164221 TGAAACCATCCCTCTCCTCATTAC 59.836 45.833 0.00 0.00 0.00 1.89
518 522 3.421394 ACCATCCCTCTCCTCATTACA 57.579 47.619 0.00 0.00 0.00 2.41
519 523 3.736094 ACCATCCCTCTCCTCATTACAA 58.264 45.455 0.00 0.00 0.00 2.41
520 524 4.310740 ACCATCCCTCTCCTCATTACAAT 58.689 43.478 0.00 0.00 0.00 2.71
521 525 4.728860 ACCATCCCTCTCCTCATTACAATT 59.271 41.667 0.00 0.00 0.00 2.32
523 527 5.163163 CCATCCCTCTCCTCATTACAATTCA 60.163 44.000 0.00 0.00 0.00 2.57
524 528 6.466904 CCATCCCTCTCCTCATTACAATTCAT 60.467 42.308 0.00 0.00 0.00 2.57
525 529 6.581388 TCCCTCTCCTCATTACAATTCATT 57.419 37.500 0.00 0.00 0.00 2.57
526 530 6.359804 TCCCTCTCCTCATTACAATTCATTG 58.640 40.000 0.00 0.00 43.26 2.82
527 531 5.009410 CCCTCTCCTCATTACAATTCATTGC 59.991 44.000 0.00 0.00 41.38 3.56
529 533 5.508567 TCTCCTCATTACAATTCATTGCCA 58.491 37.500 0.00 0.00 41.38 4.92
530 534 5.357878 TCTCCTCATTACAATTCATTGCCAC 59.642 40.000 0.00 0.00 41.38 5.01
531 535 5.015515 TCCTCATTACAATTCATTGCCACA 58.984 37.500 0.00 0.00 41.38 4.17
532 536 5.657745 TCCTCATTACAATTCATTGCCACAT 59.342 36.000 0.00 0.00 41.38 3.21
534 538 7.341512 TCCTCATTACAATTCATTGCCACATAA 59.658 33.333 0.00 0.00 41.38 1.90
536 540 6.979817 TCATTACAATTCATTGCCACATAAGC 59.020 34.615 0.00 0.00 41.38 3.09
537 541 4.804868 ACAATTCATTGCCACATAAGCA 57.195 36.364 0.00 0.00 41.38 3.91
546 550 4.764679 TGCCACATAAGCAAGTTTACTG 57.235 40.909 0.00 0.00 37.28 2.74
548 552 4.455533 TGCCACATAAGCAAGTTTACTGAG 59.544 41.667 0.00 0.00 37.28 3.35
549 553 4.455877 GCCACATAAGCAAGTTTACTGAGT 59.544 41.667 0.00 0.00 0.00 3.41
550 554 5.048713 GCCACATAAGCAAGTTTACTGAGTT 60.049 40.000 0.00 0.00 0.00 3.01
551 555 6.373779 CCACATAAGCAAGTTTACTGAGTTG 58.626 40.000 0.00 0.00 33.95 3.16
552 556 6.373779 CACATAAGCAAGTTTACTGAGTTGG 58.626 40.000 0.00 0.00 31.96 3.77
553 557 6.204688 CACATAAGCAAGTTTACTGAGTTGGA 59.795 38.462 0.00 0.00 31.96 3.53
556 560 4.381411 AGCAAGTTTACTGAGTTGGACTC 58.619 43.478 0.00 1.21 45.26 3.36
567 571 4.175787 GAGTTGGACTCGATGTTACTGT 57.824 45.455 0.00 0.00 35.28 3.55
568 572 4.557205 GAGTTGGACTCGATGTTACTGTT 58.443 43.478 0.00 0.00 35.28 3.16
570 574 4.038763 AGTTGGACTCGATGTTACTGTTGA 59.961 41.667 0.00 0.00 0.00 3.18
571 575 4.594123 TGGACTCGATGTTACTGTTGAA 57.406 40.909 0.00 0.00 0.00 2.69
573 577 5.547465 TGGACTCGATGTTACTGTTGAAAT 58.453 37.500 0.00 0.00 0.00 2.17
574 578 5.995282 TGGACTCGATGTTACTGTTGAAATT 59.005 36.000 0.00 0.00 0.00 1.82
575 579 7.156000 TGGACTCGATGTTACTGTTGAAATTA 58.844 34.615 0.00 0.00 0.00 1.40
576 580 7.822334 TGGACTCGATGTTACTGTTGAAATTAT 59.178 33.333 0.00 0.00 0.00 1.28
577 581 8.665685 GGACTCGATGTTACTGTTGAAATTATT 58.334 33.333 0.00 0.00 0.00 1.40
578 582 9.690434 GACTCGATGTTACTGTTGAAATTATTC 57.310 33.333 0.00 0.00 36.04 1.75
579 583 9.436957 ACTCGATGTTACTGTTGAAATTATTCT 57.563 29.630 0.00 0.00 36.48 2.40
580 584 9.907576 CTCGATGTTACTGTTGAAATTATTCTC 57.092 33.333 0.00 0.00 36.48 2.87
581 585 8.592155 TCGATGTTACTGTTGAAATTATTCTCG 58.408 33.333 0.00 0.00 36.48 4.04
582 586 7.370836 CGATGTTACTGTTGAAATTATTCTCGC 59.629 37.037 0.00 0.00 36.48 5.03
583 587 7.667043 TGTTACTGTTGAAATTATTCTCGCT 57.333 32.000 0.00 0.00 36.48 4.93
584 588 7.518161 TGTTACTGTTGAAATTATTCTCGCTG 58.482 34.615 0.00 0.00 36.48 5.18
585 589 7.172532 TGTTACTGTTGAAATTATTCTCGCTGT 59.827 33.333 0.00 0.00 36.48 4.40
586 590 5.931532 ACTGTTGAAATTATTCTCGCTGTG 58.068 37.500 0.00 0.00 36.48 3.66
587 591 5.106555 ACTGTTGAAATTATTCTCGCTGTGG 60.107 40.000 0.00 0.00 36.48 4.17
589 593 3.609853 TGAAATTATTCTCGCTGTGGCT 58.390 40.909 0.00 0.00 36.48 4.75
590 594 4.765273 TGAAATTATTCTCGCTGTGGCTA 58.235 39.130 0.00 0.00 36.48 3.93
605 609 6.646653 CGCTGTGGCTAAGAGATATTTTATCA 59.353 38.462 0.00 0.00 36.09 2.15
710 719 4.339247 GCAATGGAGCCATTATTACAGTGT 59.661 41.667 13.99 0.00 43.92 3.55
711 720 5.734220 GCAATGGAGCCATTATTACAGTGTG 60.734 44.000 13.99 1.00 43.92 3.82
877 886 2.430382 TTCGGGTTGACCTCGAGTGC 62.430 60.000 12.31 3.16 38.95 4.40
962 976 5.028549 ACCACCATTATTCAGTAGAGCTG 57.971 43.478 0.00 0.00 46.34 4.24
1011 1025 0.522076 GCTGCGAGATGAAAAAGGCG 60.522 55.000 0.00 0.00 0.00 5.52
1197 1230 4.036380 TGTTCATCTGATCTATGTACGCGT 59.964 41.667 19.17 19.17 29.93 6.01
1215 1248 1.071605 GTGTGCGCTCTTCTTCGATT 58.928 50.000 9.73 0.00 0.00 3.34
1268 1301 5.484715 TGGTCCATAGTAAGCTGTAACAAC 58.515 41.667 0.00 0.00 0.00 3.32
1274 1307 6.291637 CCATAGTAAGCTGTAACAACGATTCG 60.292 42.308 4.14 4.14 0.00 3.34
1303 1340 5.488645 TTGTTGCAGCATGAGTATGTATG 57.511 39.130 3.36 0.00 39.69 2.39
1442 1481 5.427481 AGCCAATGAATCAAATCAATCCCTT 59.573 36.000 0.00 0.00 32.06 3.95
1507 1546 1.627879 TACTTTTAAGGGCGCGTACG 58.372 50.000 11.84 11.84 44.07 3.67
1536 1575 3.389687 CATCGGTTTTGATGTTCTCCG 57.610 47.619 0.00 0.00 40.67 4.63
1553 1592 2.615618 GCAGCGCGTAGTTCGATG 59.384 61.111 8.43 0.00 44.94 3.84
1592 1631 7.977789 TGTAAAATCTACAGCTGAACATGAA 57.022 32.000 23.35 0.00 0.00 2.57
1604 1643 4.679662 CTGAACATGAATTTCCTCCATGC 58.320 43.478 0.00 0.00 40.81 4.06
1701 1740 2.436824 GGTGAGCGGAGGGAAAGC 60.437 66.667 0.00 0.00 0.00 3.51
1737 1779 3.463533 TGTTAACGTGAAATCCATGCG 57.536 42.857 0.26 0.00 35.17 4.73
1852 1898 1.479730 CAGAGCTGAGCATGGTACTCA 59.520 52.381 18.71 11.43 41.78 3.41
1904 1950 8.298729 TCTTGAGCTCTCTAAGTAAATCATCA 57.701 34.615 16.19 0.00 0.00 3.07
2018 2064 4.389576 GCAAGCTTGTCGGTGCGG 62.390 66.667 26.55 0.00 0.00 5.69
2036 2082 5.220796 GGTGCGGACAGAGGTAATTTTATTC 60.221 44.000 9.96 0.00 0.00 1.75
2083 2134 2.878406 CCTTTTTCTCTGCAGAACGGAA 59.122 45.455 18.85 14.76 38.44 4.30
2200 2255 4.759693 AGTTCGTGTTTGATCATAAGCCAA 59.240 37.500 0.00 0.00 0.00 4.52
2229 2284 9.810545 TTTTCTAGGTTTGACCAATTTTTGTAG 57.189 29.630 0.00 0.00 41.95 2.74
2230 2285 8.528044 TTCTAGGTTTGACCAATTTTTGTAGT 57.472 30.769 0.00 0.00 41.95 2.73
2433 2716 6.430000 ACAGAATGCTTTACGTTTTGAGGTAT 59.570 34.615 0.00 0.00 42.53 2.73
2441 2724 7.465513 GCTTTACGTTTTGAGGTATGGAGTATG 60.466 40.741 0.00 0.00 0.00 2.39
2442 2725 4.766375 ACGTTTTGAGGTATGGAGTATGG 58.234 43.478 0.00 0.00 0.00 2.74
2470 2762 7.793927 ACAATGAAATAGAGCCTAGCTTTAC 57.206 36.000 0.00 0.00 39.88 2.01
2487 2779 5.209944 CTTTACGAAAGCTGATCTCAACC 57.790 43.478 0.00 0.00 0.00 3.77
2490 2782 3.679389 ACGAAAGCTGATCTCAACCATT 58.321 40.909 0.00 0.00 0.00 3.16
2491 2783 3.438087 ACGAAAGCTGATCTCAACCATTG 59.562 43.478 0.00 0.00 0.00 2.82
2493 2785 4.631377 CGAAAGCTGATCTCAACCATTGTA 59.369 41.667 0.00 0.00 0.00 2.41
2573 2866 0.311165 GCAATATGGCAGCAGCAGAG 59.689 55.000 2.65 0.00 44.61 3.35
2726 3019 8.428063 AGTTCTCTAATGAAATCCTCGATTGAT 58.572 33.333 0.00 0.00 32.14 2.57
2782 3077 6.643388 ACCCTTCATTTAATTCAGATTTGGC 58.357 36.000 0.00 0.00 0.00 4.52
2794 3089 1.702491 GATTTGGCCGTACGAGCACC 61.702 60.000 18.76 12.77 0.00 5.01
2812 3107 1.026718 CCACCTTCTCCCGCATCAAC 61.027 60.000 0.00 0.00 0.00 3.18
2907 3253 1.308069 CCATGCACAACCTTCTCCCG 61.308 60.000 0.00 0.00 0.00 5.14
2919 3265 0.960364 TTCTCCCGCATCAAGCAACC 60.960 55.000 0.00 0.00 46.13 3.77
2958 3304 1.002011 GAAGCACCACCTTCTCCCC 60.002 63.158 0.00 0.00 38.50 4.81
2959 3305 2.485780 GAAGCACCACCTTCTCCCCC 62.486 65.000 0.00 0.00 38.50 5.40
2961 3307 2.616458 GCACCACCTTCTCCCCCAT 61.616 63.158 0.00 0.00 0.00 4.00
2962 3308 1.609783 CACCACCTTCTCCCCCATC 59.390 63.158 0.00 0.00 0.00 3.51
2963 3309 1.163309 ACCACCTTCTCCCCCATCA 59.837 57.895 0.00 0.00 0.00 3.07
2964 3310 0.477597 ACCACCTTCTCCCCCATCAA 60.478 55.000 0.00 0.00 0.00 2.57
2965 3311 0.257039 CCACCTTCTCCCCCATCAAG 59.743 60.000 0.00 0.00 0.00 3.02
2966 3312 0.394899 CACCTTCTCCCCCATCAAGC 60.395 60.000 0.00 0.00 0.00 4.01
2967 3313 1.153086 CCTTCTCCCCCATCAAGCG 60.153 63.158 0.00 0.00 0.00 4.68
2968 3314 1.626356 CCTTCTCCCCCATCAAGCGA 61.626 60.000 0.00 0.00 0.00 4.93
2969 3315 0.462759 CTTCTCCCCCATCAAGCGAC 60.463 60.000 0.00 0.00 0.00 5.19
2970 3316 2.202932 CTCCCCCATCAAGCGACG 60.203 66.667 0.00 0.00 0.00 5.12
2971 3317 2.682136 TCCCCCATCAAGCGACGA 60.682 61.111 0.00 0.00 0.00 4.20
2972 3318 2.202932 CCCCCATCAAGCGACGAG 60.203 66.667 0.00 0.00 0.00 4.18
2974 3320 1.519455 CCCCATCAAGCGACGAGAC 60.519 63.158 0.00 0.00 0.00 3.36
2994 3340 2.408022 CGGTCGAGGCCGTAGAAG 59.592 66.667 8.12 0.00 46.11 2.85
2995 3341 2.104530 GGTCGAGGCCGTAGAAGC 59.895 66.667 0.00 0.00 37.05 3.86
2996 3342 2.707849 GGTCGAGGCCGTAGAAGCA 61.708 63.158 0.00 0.00 37.05 3.91
2997 3343 1.516603 GTCGAGGCCGTAGAAGCAC 60.517 63.158 0.00 0.00 37.05 4.40
2998 3344 2.202756 CGAGGCCGTAGAAGCACC 60.203 66.667 0.00 0.00 0.00 5.01
2999 3345 2.978824 GAGGCCGTAGAAGCACCA 59.021 61.111 0.00 0.00 0.00 4.17
3000 3346 1.448013 GAGGCCGTAGAAGCACCAC 60.448 63.158 0.00 0.00 0.00 4.16
3001 3347 2.436115 GGCCGTAGAAGCACCACC 60.436 66.667 0.00 0.00 0.00 4.61
3002 3348 2.663196 GCCGTAGAAGCACCACCT 59.337 61.111 0.00 0.00 0.00 4.00
3003 3349 1.003718 GCCGTAGAAGCACCACCTT 60.004 57.895 0.00 0.00 0.00 3.50
3004 3350 0.605589 GCCGTAGAAGCACCACCTTT 60.606 55.000 0.00 0.00 0.00 3.11
3005 3351 1.892209 CCGTAGAAGCACCACCTTTT 58.108 50.000 0.00 0.00 0.00 2.27
3006 3352 1.804748 CCGTAGAAGCACCACCTTTTC 59.195 52.381 0.00 0.00 0.00 2.29
3007 3353 1.804748 CGTAGAAGCACCACCTTTTCC 59.195 52.381 0.00 0.00 0.00 3.13
3008 3354 2.160205 GTAGAAGCACCACCTTTTCCC 58.840 52.381 0.00 0.00 0.00 3.97
3068 3414 1.683011 CCACCTTCTCCCGCATCAAAT 60.683 52.381 0.00 0.00 0.00 2.32
3079 3425 0.721154 GCATCAAATGACGAGACGCA 59.279 50.000 0.00 0.00 0.00 5.24
3081 3427 1.726248 CATCAAATGACGAGACGCACA 59.274 47.619 0.00 0.00 0.00 4.57
3228 3577 7.125053 AGAGAGGTAATTACTCCTTTTCTCTGG 59.875 40.741 17.59 0.00 33.91 3.86
3245 3594 7.110155 TTTCTCTGGAGAACAGTTGTTAAGTT 58.890 34.615 11.96 0.00 46.13 2.66
3306 3682 9.853177 AATACTTCCTCCTTTCCATAATGTAAG 57.147 33.333 0.00 0.00 0.00 2.34
3307 3683 7.510675 ACTTCCTCCTTTCCATAATGTAAGA 57.489 36.000 0.00 0.00 0.00 2.10
3308 3684 7.339482 ACTTCCTCCTTTCCATAATGTAAGAC 58.661 38.462 0.00 0.00 0.00 3.01
3309 3685 5.914033 TCCTCCTTTCCATAATGTAAGACG 58.086 41.667 0.00 0.00 0.00 4.18
3310 3686 5.424252 TCCTCCTTTCCATAATGTAAGACGT 59.576 40.000 0.00 0.00 0.00 4.34
3311 3687 6.070424 TCCTCCTTTCCATAATGTAAGACGTT 60.070 38.462 0.00 0.00 0.00 3.99
3312 3688 6.598064 CCTCCTTTCCATAATGTAAGACGTTT 59.402 38.462 0.00 0.00 0.00 3.60
3313 3689 7.120726 CCTCCTTTCCATAATGTAAGACGTTTT 59.879 37.037 0.00 0.00 0.00 2.43
3314 3690 8.398878 TCCTTTCCATAATGTAAGACGTTTTT 57.601 30.769 0.00 0.00 0.00 1.94
3340 3716 6.295039 ACACTACAGTAATGTCAAAAACCG 57.705 37.500 0.00 0.00 0.00 4.44
3341 3717 5.818857 ACACTACAGTAATGTCAAAAACCGT 59.181 36.000 0.00 0.00 0.00 4.83
3342 3718 6.018507 ACACTACAGTAATGTCAAAAACCGTC 60.019 38.462 0.00 0.00 0.00 4.79
3343 3719 4.823790 ACAGTAATGTCAAAAACCGTCC 57.176 40.909 0.00 0.00 0.00 4.79
3344 3720 4.457466 ACAGTAATGTCAAAAACCGTCCT 58.543 39.130 0.00 0.00 0.00 3.85
3345 3721 4.885325 ACAGTAATGTCAAAAACCGTCCTT 59.115 37.500 0.00 0.00 0.00 3.36
3346 3722 5.358725 ACAGTAATGTCAAAAACCGTCCTTT 59.641 36.000 0.00 0.00 0.00 3.11
3347 3723 6.543100 ACAGTAATGTCAAAAACCGTCCTTTA 59.457 34.615 0.00 0.00 0.00 1.85
3348 3724 7.229907 ACAGTAATGTCAAAAACCGTCCTTTAT 59.770 33.333 0.00 0.00 0.00 1.40
3349 3725 8.079809 CAGTAATGTCAAAAACCGTCCTTTATT 58.920 33.333 0.00 0.00 0.00 1.40
3350 3726 9.287373 AGTAATGTCAAAAACCGTCCTTTATTA 57.713 29.630 0.00 0.00 0.00 0.98
3352 3728 8.980143 AATGTCAAAAACCGTCCTTTATTATG 57.020 30.769 0.00 0.00 0.00 1.90
3353 3729 6.915349 TGTCAAAAACCGTCCTTTATTATGG 58.085 36.000 0.00 0.00 0.00 2.74
3354 3730 6.071840 TGTCAAAAACCGTCCTTTATTATGGG 60.072 38.462 0.00 0.00 0.00 4.00
3355 3731 6.151480 GTCAAAAACCGTCCTTTATTATGGGA 59.849 38.462 0.00 0.00 0.00 4.37
3356 3732 6.151480 TCAAAAACCGTCCTTTATTATGGGAC 59.849 38.462 0.00 0.00 44.16 4.46
3357 3733 4.847990 AACCGTCCTTTATTATGGGACA 57.152 40.909 11.16 0.00 46.93 4.02
3393 3769 4.104831 ACAAACTAATGCTACTCCCTCCT 58.895 43.478 0.00 0.00 0.00 3.69
3411 3787 4.082125 CTCCTTCCAAATACACAAGGCTT 58.918 43.478 0.00 0.00 36.16 4.35
3417 3793 7.122055 CCTTCCAAATACACAAGGCTTAATACA 59.878 37.037 0.00 0.00 0.00 2.29
3428 3804 8.452534 CACAAGGCTTAATACATTTTTACGGTA 58.547 33.333 0.00 0.00 0.00 4.02
3429 3805 9.181061 ACAAGGCTTAATACATTTTTACGGTAT 57.819 29.630 0.00 0.00 0.00 2.73
3434 3810 9.874215 GCTTAATACATTTTTACGGTATCCTTC 57.126 33.333 0.00 0.00 0.00 3.46
3458 3834 4.677182 AGGCTTTGACCATTGGTTAGAAT 58.323 39.130 10.29 0.00 35.25 2.40
3563 3946 8.408043 TCAACAAATTCATATGTGGAAGAAGT 57.592 30.769 1.90 0.00 0.00 3.01
3653 4049 9.301897 AGAAAATCTAGAAAAATGTGTTAGCCT 57.698 29.630 0.00 0.00 0.00 4.58
3665 4061 7.961325 AATGTGTTAGCCTTTTTATGTTTGG 57.039 32.000 0.00 0.00 0.00 3.28
3670 4066 4.871933 AGCCTTTTTATGTTTGGACAGG 57.128 40.909 0.00 0.00 39.58 4.00
3671 4067 3.006859 AGCCTTTTTATGTTTGGACAGGC 59.993 43.478 0.00 0.00 39.58 4.85
3681 4077 0.034337 TTGGACAGGCGGAGTAACAC 59.966 55.000 0.00 0.00 0.00 3.32
3686 4082 1.006571 AGGCGGAGTAACACACACG 60.007 57.895 0.00 0.00 34.21 4.49
3689 4085 0.039256 GCGGAGTAACACACACGGTA 60.039 55.000 0.00 0.00 32.44 4.02
3752 4337 6.930731 TGGAATAAAATAAAAGTCAGCCACC 58.069 36.000 0.00 0.00 0.00 4.61
3853 4442 9.689976 TCCAATGAACTTTGTAAACATATGTTG 57.310 29.630 21.46 10.36 38.44 3.33
3909 4498 1.663695 ACGACCTAAATTCCCATGCG 58.336 50.000 0.00 0.00 0.00 4.73
3928 4517 3.200483 GCGAAACTTATATTCCACCCGT 58.800 45.455 0.00 0.00 0.00 5.28
3946 4535 4.465305 ACCCGTAAAGAGCACTGTATAGTT 59.535 41.667 0.00 0.00 34.07 2.24
3948 4537 6.183360 ACCCGTAAAGAGCACTGTATAGTTAG 60.183 42.308 0.00 0.00 34.07 2.34
3983 4573 8.757789 CGTAAATGAAATAGTCTAACGGCAATA 58.242 33.333 0.00 0.00 0.00 1.90
4004 4595 8.135529 GCAATAGAAAATTACCCAATAGTGACC 58.864 37.037 0.00 0.00 0.00 4.02
4044 4636 8.989653 AGAAGTTTCAAGCTAGTGTACTAATC 57.010 34.615 0.00 0.00 0.00 1.75
5341 5940 7.443259 GGTAACTAATAACCTTTTCTGTGCA 57.557 36.000 0.00 0.00 32.72 4.57
5349 5948 3.356290 ACCTTTTCTGTGCAGAACTTGT 58.644 40.909 13.50 8.36 46.13 3.16
5354 5953 0.590195 CTGTGCAGAACTTGTGAGGC 59.410 55.000 0.00 0.00 0.00 4.70
5379 5978 5.583061 TCAGTTAGCTTGTTCGAAAGTCAAA 59.417 36.000 0.00 0.00 0.00 2.69
5380 5979 6.092944 TCAGTTAGCTTGTTCGAAAGTCAAAA 59.907 34.615 0.00 0.00 0.00 2.44
5386 5985 5.971202 GCTTGTTCGAAAGTCAAAATCTGAA 59.029 36.000 0.00 0.00 35.22 3.02
5452 6069 1.915078 CGGGGGAGCAGATGGTTCTT 61.915 60.000 0.00 0.00 0.00 2.52
5481 6101 5.473066 AACCAGGTACGTACAAAGTATGT 57.527 39.130 26.02 10.41 46.36 2.29
5525 6145 1.203523 TGCATTCGTATTTGGTTGGGC 59.796 47.619 0.00 0.00 0.00 5.36
5562 6182 8.253113 AGCAAGGAGAAAACATATAATTGTTGG 58.747 33.333 0.00 0.00 39.68 3.77
5582 6202 4.628074 TGGCGATAATAGAGTTTGGTAGC 58.372 43.478 0.00 0.00 0.00 3.58
5614 6234 9.837525 AACTTACAATACTAACAGACTTACTCG 57.162 33.333 0.00 0.00 0.00 4.18
5615 6235 9.224267 ACTTACAATACTAACAGACTTACTCGA 57.776 33.333 0.00 0.00 0.00 4.04
5619 6239 9.924650 ACAATACTAACAGACTTACTCGAAAAT 57.075 29.630 0.00 0.00 0.00 1.82
5707 11092 1.580893 CGCAATGAACGCATGGACG 60.581 57.895 0.00 0.00 34.26 4.79
5804 11189 2.866523 TATCGGCCAGAGAACGGGGT 62.867 60.000 2.24 0.00 32.13 4.95
5988 11373 3.087031 CAACTTCTTCCATGCCATGACT 58.913 45.455 6.18 0.00 0.00 3.41
6334 11719 2.583593 GGCCTCGTCTCGTCATGC 60.584 66.667 0.00 0.00 0.00 4.06
6342 11727 2.507769 CTCGTCATGCTGCTGCGA 60.508 61.111 11.21 9.09 43.34 5.10
6363 11748 2.282958 AGGTCGAGGGAGTTCGCA 60.283 61.111 0.00 0.00 40.29 5.10
6483 11868 0.728129 TGAACTCGTGCGACGTGATC 60.728 55.000 14.51 12.75 43.14 2.92
6765 12150 1.073923 ACCTTCTTCAACGGCCAGAAT 59.926 47.619 2.24 0.00 0.00 2.40
6893 12278 4.508128 TCCCGGATCAAGCGACGC 62.508 66.667 13.03 13.03 0.00 5.19
6921 12306 4.794278 TGCGAACAGAGGTAATCAACTA 57.206 40.909 0.00 0.00 0.00 2.24
7013 12415 3.684908 TGCAGATCTCGGGAATGAAAAA 58.315 40.909 5.12 0.00 0.00 1.94
7039 12441 2.231380 AAGCCATGAACGGGGGAGT 61.231 57.895 0.00 0.00 0.00 3.85
7069 12471 6.237755 GGTTCTTCGATAAAATCAGGTACGTG 60.238 42.308 9.30 9.30 0.00 4.49
7093 12495 5.848036 GCAAAGTATAGTGCATATTCAAGCG 59.152 40.000 0.00 0.00 40.58 4.68
7103 12505 6.017933 GTGCATATTCAAGCGCTATGTATTC 58.982 40.000 12.05 2.70 38.19 1.75
7104 12506 5.700373 TGCATATTCAAGCGCTATGTATTCA 59.300 36.000 12.05 5.37 0.00 2.57
7110 12512 4.209080 TCAAGCGCTATGTATTCACATTCG 59.791 41.667 12.05 2.49 42.98 3.34
7204 12611 4.083537 ACATTGCGTTGGTTGTACATACAG 60.084 41.667 0.00 0.00 37.52 2.74
7206 12613 4.254402 TGCGTTGGTTGTACATACAGTA 57.746 40.909 0.00 0.00 37.52 2.74
7207 12614 4.239304 TGCGTTGGTTGTACATACAGTAG 58.761 43.478 0.00 0.00 37.52 2.57
7254 12662 2.299867 TCAGGGAGCTTGGAATTTTTGC 59.700 45.455 0.00 0.00 0.00 3.68
7517 12926 7.478520 ACACAAACTTAGAGAACATGTGTAC 57.521 36.000 0.00 0.00 45.59 2.90
7627 13037 0.854705 AAACGCCGTTCTCGTGTAAC 59.145 50.000 1.60 0.00 40.36 2.50
7680 13090 6.536447 ACTGCAATTGAAATTTTCCCAAGAT 58.464 32.000 10.34 0.00 0.00 2.40
7901 13315 1.202582 GTGTATGTGGTCTCAGCGTCT 59.797 52.381 0.00 0.00 0.00 4.18
8363 13777 0.811281 GCAAGGGCTACACAATGACC 59.189 55.000 0.00 0.00 36.96 4.02
8540 13954 0.178990 AGGTTGGCTTTGAGGTGGTC 60.179 55.000 0.00 0.00 0.00 4.02
8541 13955 1.179174 GGTTGGCTTTGAGGTGGTCC 61.179 60.000 0.00 0.00 0.00 4.46
9555 15029 2.460757 TAGGTTAACAGGCACCGTTC 57.539 50.000 8.10 0.00 38.21 3.95
9556 15030 0.763035 AGGTTAACAGGCACCGTTCT 59.237 50.000 8.10 0.00 38.21 3.01
9557 15031 1.142262 AGGTTAACAGGCACCGTTCTT 59.858 47.619 8.10 0.00 38.21 2.52
9558 15032 2.369532 AGGTTAACAGGCACCGTTCTTA 59.630 45.455 8.10 0.00 38.21 2.10
9559 15033 2.740447 GGTTAACAGGCACCGTTCTTAG 59.260 50.000 8.10 0.00 0.00 2.18
9560 15034 3.555586 GGTTAACAGGCACCGTTCTTAGA 60.556 47.826 8.10 0.00 0.00 2.10
9561 15035 4.251268 GTTAACAGGCACCGTTCTTAGAT 58.749 43.478 0.00 0.00 0.00 1.98
9562 15036 3.418684 AACAGGCACCGTTCTTAGATT 57.581 42.857 0.00 0.00 0.00 2.40
9563 15037 4.546829 AACAGGCACCGTTCTTAGATTA 57.453 40.909 0.00 0.00 0.00 1.75
9564 15038 4.546829 ACAGGCACCGTTCTTAGATTAA 57.453 40.909 0.00 0.00 0.00 1.40
9565 15039 4.901868 ACAGGCACCGTTCTTAGATTAAA 58.098 39.130 0.00 0.00 0.00 1.52
9566 15040 5.310451 ACAGGCACCGTTCTTAGATTAAAA 58.690 37.500 0.00 0.00 0.00 1.52
9567 15041 5.944007 ACAGGCACCGTTCTTAGATTAAAAT 59.056 36.000 0.00 0.00 0.00 1.82
9568 15042 6.433093 ACAGGCACCGTTCTTAGATTAAAATT 59.567 34.615 0.00 0.00 0.00 1.82
9569 15043 7.608761 ACAGGCACCGTTCTTAGATTAAAATTA 59.391 33.333 0.00 0.00 0.00 1.40
9570 15044 7.908601 CAGGCACCGTTCTTAGATTAAAATTAC 59.091 37.037 0.00 0.00 0.00 1.89
9571 15045 7.608761 AGGCACCGTTCTTAGATTAAAATTACA 59.391 33.333 0.00 0.00 0.00 2.41
9572 15046 8.403236 GGCACCGTTCTTAGATTAAAATTACAT 58.597 33.333 0.00 0.00 0.00 2.29
9573 15047 9.783256 GCACCGTTCTTAGATTAAAATTACATT 57.217 29.630 0.00 0.00 0.00 2.71
9575 15049 9.783256 ACCGTTCTTAGATTAAAATTACATTGC 57.217 29.630 0.00 0.00 0.00 3.56
9576 15050 9.781834 CCGTTCTTAGATTAAAATTACATTGCA 57.218 29.630 0.00 0.00 0.00 4.08
9585 15059 9.412390 GATTAAAATTACATTGCAGCAAATTCG 57.588 29.630 12.97 3.87 0.00 3.34
9586 15060 8.526218 TTAAAATTACATTGCAGCAAATTCGA 57.474 26.923 12.97 0.00 0.00 3.71
9587 15061 7.418840 AAAATTACATTGCAGCAAATTCGAA 57.581 28.000 12.97 0.00 0.00 3.71
9588 15062 7.418840 AAATTACATTGCAGCAAATTCGAAA 57.581 28.000 12.97 1.87 0.00 3.46
9589 15063 7.599630 AATTACATTGCAGCAAATTCGAAAT 57.400 28.000 12.97 4.12 0.00 2.17
9590 15064 4.914312 ACATTGCAGCAAATTCGAAATG 57.086 36.364 12.97 5.73 0.00 2.32
9591 15065 4.558178 ACATTGCAGCAAATTCGAAATGA 58.442 34.783 12.97 0.00 0.00 2.57
9592 15066 5.172934 ACATTGCAGCAAATTCGAAATGAT 58.827 33.333 12.97 8.53 0.00 2.45
9593 15067 5.290158 ACATTGCAGCAAATTCGAAATGATC 59.710 36.000 12.97 6.73 0.00 2.92
9594 15068 3.772932 TGCAGCAAATTCGAAATGATCC 58.227 40.909 16.00 3.09 0.00 3.36
9595 15069 3.444742 TGCAGCAAATTCGAAATGATCCT 59.555 39.130 16.00 3.68 0.00 3.24
9596 15070 4.639755 TGCAGCAAATTCGAAATGATCCTA 59.360 37.500 16.00 0.00 0.00 2.94
9597 15071 5.210715 GCAGCAAATTCGAAATGATCCTAG 58.789 41.667 16.00 2.14 0.00 3.02
9598 15072 5.210715 CAGCAAATTCGAAATGATCCTAGC 58.789 41.667 16.00 5.21 0.00 3.42
9599 15073 4.276926 AGCAAATTCGAAATGATCCTAGCC 59.723 41.667 16.00 0.00 0.00 3.93
9600 15074 4.036734 GCAAATTCGAAATGATCCTAGCCA 59.963 41.667 16.00 0.00 0.00 4.75
9601 15075 5.514279 CAAATTCGAAATGATCCTAGCCAC 58.486 41.667 0.00 0.00 0.00 5.01
9602 15076 3.904800 TTCGAAATGATCCTAGCCACA 57.095 42.857 0.00 0.00 0.00 4.17
9603 15077 3.904800 TCGAAATGATCCTAGCCACAA 57.095 42.857 0.00 0.00 0.00 3.33
9604 15078 4.214986 TCGAAATGATCCTAGCCACAAA 57.785 40.909 0.00 0.00 0.00 2.83
9605 15079 4.584874 TCGAAATGATCCTAGCCACAAAA 58.415 39.130 0.00 0.00 0.00 2.44
9606 15080 5.007034 TCGAAATGATCCTAGCCACAAAAA 58.993 37.500 0.00 0.00 0.00 1.94
9636 15110 9.927668 AAAATAAAAAGTGATCCACGATTTCAT 57.072 25.926 0.00 0.00 39.64 2.57
9637 15111 9.573133 AAATAAAAAGTGATCCACGATTTCATC 57.427 29.630 0.00 0.00 39.64 2.92
9638 15112 6.573664 AAAAAGTGATCCACGATTTCATCA 57.426 33.333 0.00 0.00 39.64 3.07
9639 15113 6.573664 AAAAGTGATCCACGATTTCATCAA 57.426 33.333 0.00 0.00 39.64 2.57
9640 15114 6.573664 AAAGTGATCCACGATTTCATCAAA 57.426 33.333 0.00 0.00 39.64 2.69
9641 15115 5.808042 AGTGATCCACGATTTCATCAAAG 57.192 39.130 0.00 0.00 39.64 2.77
9642 15116 4.095483 AGTGATCCACGATTTCATCAAAGC 59.905 41.667 0.00 0.00 39.64 3.51
9643 15117 4.009002 TGATCCACGATTTCATCAAAGCA 58.991 39.130 0.00 0.00 0.00 3.91
9644 15118 4.458642 TGATCCACGATTTCATCAAAGCAA 59.541 37.500 0.00 0.00 0.00 3.91
9645 15119 4.844998 TCCACGATTTCATCAAAGCAAA 57.155 36.364 0.00 0.00 0.00 3.68
9646 15120 5.193663 TCCACGATTTCATCAAAGCAAAA 57.806 34.783 0.00 0.00 0.00 2.44
9647 15121 5.221880 TCCACGATTTCATCAAAGCAAAAG 58.778 37.500 0.00 0.00 0.00 2.27
9648 15122 4.386652 CCACGATTTCATCAAAGCAAAAGG 59.613 41.667 0.00 0.00 0.00 3.11
9649 15123 4.386652 CACGATTTCATCAAAGCAAAAGGG 59.613 41.667 0.00 0.00 0.00 3.95
9650 15124 4.039124 ACGATTTCATCAAAGCAAAAGGGT 59.961 37.500 0.00 0.00 0.00 4.34
9651 15125 4.622740 CGATTTCATCAAAGCAAAAGGGTC 59.377 41.667 0.00 0.00 0.00 4.46
9652 15126 5.540911 GATTTCATCAAAGCAAAAGGGTCA 58.459 37.500 0.00 0.00 0.00 4.02
9653 15127 5.549742 TTTCATCAAAGCAAAAGGGTCAT 57.450 34.783 0.00 0.00 0.00 3.06
9654 15128 5.549742 TTCATCAAAGCAAAAGGGTCATT 57.450 34.783 0.00 0.00 0.00 2.57
9655 15129 4.885413 TCATCAAAGCAAAAGGGTCATTG 58.115 39.130 0.00 0.00 0.00 2.82
9656 15130 4.588106 TCATCAAAGCAAAAGGGTCATTGA 59.412 37.500 0.00 0.00 0.00 2.57
9657 15131 5.246656 TCATCAAAGCAAAAGGGTCATTGAT 59.753 36.000 0.00 0.00 36.70 2.57
9658 15132 5.138125 TCAAAGCAAAAGGGTCATTGATC 57.862 39.130 0.00 0.00 0.00 2.92
9659 15133 4.021192 TCAAAGCAAAAGGGTCATTGATCC 60.021 41.667 7.97 7.97 31.91 3.36
9660 15134 3.463048 AGCAAAAGGGTCATTGATCCT 57.537 42.857 12.97 12.97 46.47 3.24
9661 15135 3.359950 AGCAAAAGGGTCATTGATCCTC 58.640 45.455 18.82 6.61 43.24 3.71
9662 15136 3.011032 AGCAAAAGGGTCATTGATCCTCT 59.989 43.478 18.82 8.81 43.24 3.69
9663 15137 3.766051 GCAAAAGGGTCATTGATCCTCTT 59.234 43.478 18.82 8.88 43.24 2.85
9664 15138 4.949856 GCAAAAGGGTCATTGATCCTCTTA 59.050 41.667 18.82 0.00 43.24 2.10
9665 15139 5.595952 GCAAAAGGGTCATTGATCCTCTTAT 59.404 40.000 18.82 0.30 43.24 1.73
9666 15140 6.772716 GCAAAAGGGTCATTGATCCTCTTATA 59.227 38.462 18.82 0.00 43.24 0.98
9667 15141 7.449704 GCAAAAGGGTCATTGATCCTCTTATAT 59.550 37.037 18.82 0.00 43.24 0.86
9668 15142 8.790718 CAAAAGGGTCATTGATCCTCTTATATG 58.209 37.037 18.82 8.17 43.24 1.78
9669 15143 7.639062 AAGGGTCATTGATCCTCTTATATGT 57.361 36.000 18.82 0.00 43.24 2.29
9670 15144 8.742125 AAGGGTCATTGATCCTCTTATATGTA 57.258 34.615 18.82 0.00 43.24 2.29
9671 15145 8.742125 AGGGTCATTGATCCTCTTATATGTAA 57.258 34.615 12.97 0.00 39.22 2.41
9672 15146 9.170890 AGGGTCATTGATCCTCTTATATGTAAA 57.829 33.333 12.97 0.00 39.22 2.01
9673 15147 9.793259 GGGTCATTGATCCTCTTATATGTAAAA 57.207 33.333 8.81 0.00 28.56 1.52
9696 15170 9.753674 AAAACAAATATCATTTCTACTCCTCCA 57.246 29.630 0.00 0.00 0.00 3.86
9697 15171 9.753674 AAACAAATATCATTTCTACTCCTCCAA 57.246 29.630 0.00 0.00 0.00 3.53
9698 15172 9.753674 AACAAATATCATTTCTACTCCTCCAAA 57.246 29.630 0.00 0.00 0.00 3.28
9699 15173 9.927081 ACAAATATCATTTCTACTCCTCCAAAT 57.073 29.630 0.00 0.00 0.00 2.32
9705 15179 8.146053 TCATTTCTACTCCTCCAAATAGTTCA 57.854 34.615 0.00 0.00 0.00 3.18
9706 15180 8.260818 TCATTTCTACTCCTCCAAATAGTTCAG 58.739 37.037 0.00 0.00 0.00 3.02
9707 15181 7.792364 TTTCTACTCCTCCAAATAGTTCAGA 57.208 36.000 0.00 0.00 0.00 3.27
9708 15182 7.792364 TTCTACTCCTCCAAATAGTTCAGAA 57.208 36.000 0.00 0.00 0.00 3.02
9709 15183 7.171630 TCTACTCCTCCAAATAGTTCAGAAC 57.828 40.000 5.00 5.00 0.00 3.01
9710 15184 5.825593 ACTCCTCCAAATAGTTCAGAACA 57.174 39.130 15.85 2.27 0.00 3.18
9711 15185 5.552178 ACTCCTCCAAATAGTTCAGAACAC 58.448 41.667 15.85 0.00 0.00 3.32
9712 15186 4.566004 TCCTCCAAATAGTTCAGAACACG 58.434 43.478 15.85 0.00 0.00 4.49
9713 15187 4.282449 TCCTCCAAATAGTTCAGAACACGA 59.718 41.667 15.85 0.78 0.00 4.35
9714 15188 4.389077 CCTCCAAATAGTTCAGAACACGAC 59.611 45.833 15.85 0.00 0.00 4.34
9715 15189 4.951254 TCCAAATAGTTCAGAACACGACA 58.049 39.130 15.85 0.00 0.00 4.35
9716 15190 4.988540 TCCAAATAGTTCAGAACACGACAG 59.011 41.667 15.85 0.65 0.00 3.51
9717 15191 4.377431 CCAAATAGTTCAGAACACGACAGC 60.377 45.833 15.85 0.00 0.00 4.40
9718 15192 3.660501 ATAGTTCAGAACACGACAGCA 57.339 42.857 15.85 0.00 0.00 4.41
9719 15193 2.309528 AGTTCAGAACACGACAGCAA 57.690 45.000 15.85 0.00 0.00 3.91
9720 15194 2.838736 AGTTCAGAACACGACAGCAAT 58.161 42.857 15.85 0.00 0.00 3.56
9721 15195 3.206150 AGTTCAGAACACGACAGCAATT 58.794 40.909 15.85 0.00 0.00 2.32
9722 15196 3.248602 AGTTCAGAACACGACAGCAATTC 59.751 43.478 15.85 0.00 0.00 2.17
9723 15197 2.143122 TCAGAACACGACAGCAATTCC 58.857 47.619 0.00 0.00 0.00 3.01
9724 15198 1.136252 CAGAACACGACAGCAATTCCG 60.136 52.381 0.00 0.00 0.00 4.30
9725 15199 1.144969 GAACACGACAGCAATTCCGA 58.855 50.000 0.00 0.00 0.00 4.55
9726 15200 0.865769 AACACGACAGCAATTCCGAC 59.134 50.000 0.00 0.00 0.00 4.79
9727 15201 0.249699 ACACGACAGCAATTCCGACA 60.250 50.000 0.00 0.00 0.00 4.35
9728 15202 0.439985 CACGACAGCAATTCCGACAG 59.560 55.000 0.00 0.00 0.00 3.51
9729 15203 0.317160 ACGACAGCAATTCCGACAGA 59.683 50.000 0.00 0.00 0.00 3.41
9730 15204 0.994995 CGACAGCAATTCCGACAGAG 59.005 55.000 0.00 0.00 0.00 3.35
9731 15205 1.670087 CGACAGCAATTCCGACAGAGT 60.670 52.381 0.00 0.00 0.00 3.24
9732 15206 1.996191 GACAGCAATTCCGACAGAGTC 59.004 52.381 0.00 0.00 0.00 3.36
9733 15207 1.344438 ACAGCAATTCCGACAGAGTCA 59.656 47.619 0.00 0.00 32.09 3.41
9734 15208 2.224281 ACAGCAATTCCGACAGAGTCAA 60.224 45.455 0.00 0.00 32.09 3.18
9735 15209 2.807967 CAGCAATTCCGACAGAGTCAAA 59.192 45.455 0.00 0.00 32.09 2.69
9736 15210 3.070018 AGCAATTCCGACAGAGTCAAAG 58.930 45.455 0.00 0.00 32.09 2.77
9737 15211 3.067106 GCAATTCCGACAGAGTCAAAGA 58.933 45.455 0.00 0.00 32.09 2.52
9738 15212 3.120511 GCAATTCCGACAGAGTCAAAGAC 60.121 47.826 0.00 0.00 32.09 3.01
9739 15213 2.814280 TTCCGACAGAGTCAAAGACC 57.186 50.000 0.00 0.00 32.18 3.85
9740 15214 1.699730 TCCGACAGAGTCAAAGACCA 58.300 50.000 0.00 0.00 32.18 4.02
9741 15215 2.036387 TCCGACAGAGTCAAAGACCAA 58.964 47.619 0.00 0.00 32.18 3.67
9742 15216 2.432874 TCCGACAGAGTCAAAGACCAAA 59.567 45.455 0.00 0.00 32.18 3.28
9743 15217 2.802816 CCGACAGAGTCAAAGACCAAAG 59.197 50.000 0.00 0.00 32.18 2.77
9744 15218 3.492656 CCGACAGAGTCAAAGACCAAAGA 60.493 47.826 0.00 0.00 32.18 2.52
9745 15219 4.310769 CGACAGAGTCAAAGACCAAAGAT 58.689 43.478 0.00 0.00 32.18 2.40
9746 15220 4.752101 CGACAGAGTCAAAGACCAAAGATT 59.248 41.667 0.00 0.00 32.18 2.40
9747 15221 5.237344 CGACAGAGTCAAAGACCAAAGATTT 59.763 40.000 0.00 0.00 32.18 2.17
9748 15222 6.423905 CGACAGAGTCAAAGACCAAAGATTTA 59.576 38.462 0.00 0.00 32.18 1.40
9749 15223 7.359598 CGACAGAGTCAAAGACCAAAGATTTAG 60.360 40.741 0.00 0.00 32.18 1.85
9750 15224 7.509546 ACAGAGTCAAAGACCAAAGATTTAGA 58.490 34.615 0.00 0.00 32.18 2.10
9751 15225 7.993183 ACAGAGTCAAAGACCAAAGATTTAGAA 59.007 33.333 0.00 0.00 32.18 2.10
9752 15226 9.007901 CAGAGTCAAAGACCAAAGATTTAGAAT 57.992 33.333 0.00 0.00 32.18 2.40
9753 15227 9.579932 AGAGTCAAAGACCAAAGATTTAGAATT 57.420 29.630 0.00 0.00 32.18 2.17
9773 15247 8.457238 AGAATTATGTAGAAAAATCCTGAGCC 57.543 34.615 0.00 0.00 0.00 4.70
9774 15248 8.055181 AGAATTATGTAGAAAAATCCTGAGCCA 58.945 33.333 0.00 0.00 0.00 4.75
9775 15249 7.814264 ATTATGTAGAAAAATCCTGAGCCAG 57.186 36.000 0.00 0.00 0.00 4.85
9776 15250 4.908601 TGTAGAAAAATCCTGAGCCAGA 57.091 40.909 4.00 0.00 32.44 3.86
9777 15251 5.441718 TGTAGAAAAATCCTGAGCCAGAT 57.558 39.130 4.00 0.00 32.44 2.90
9778 15252 5.431765 TGTAGAAAAATCCTGAGCCAGATC 58.568 41.667 4.00 0.00 32.44 2.75
9779 15253 3.895998 AGAAAAATCCTGAGCCAGATCC 58.104 45.455 4.00 0.00 32.44 3.36
9780 15254 2.744352 AAAATCCTGAGCCAGATCCC 57.256 50.000 4.00 0.00 32.44 3.85
9781 15255 1.600058 AAATCCTGAGCCAGATCCCA 58.400 50.000 4.00 0.00 32.44 4.37
9782 15256 1.600058 AATCCTGAGCCAGATCCCAA 58.400 50.000 4.00 0.00 32.44 4.12
9783 15257 1.600058 ATCCTGAGCCAGATCCCAAA 58.400 50.000 4.00 0.00 32.44 3.28
9784 15258 1.371467 TCCTGAGCCAGATCCCAAAA 58.629 50.000 4.00 0.00 32.44 2.44
9785 15259 1.925255 TCCTGAGCCAGATCCCAAAAT 59.075 47.619 4.00 0.00 32.44 1.82
9786 15260 3.122480 TCCTGAGCCAGATCCCAAAATA 58.878 45.455 4.00 0.00 32.44 1.40
9787 15261 3.723681 TCCTGAGCCAGATCCCAAAATAT 59.276 43.478 4.00 0.00 32.44 1.28
9788 15262 4.168675 TCCTGAGCCAGATCCCAAAATATT 59.831 41.667 4.00 0.00 32.44 1.28
9789 15263 4.280174 CCTGAGCCAGATCCCAAAATATTG 59.720 45.833 4.00 0.00 32.44 1.90
9790 15264 4.870636 TGAGCCAGATCCCAAAATATTGT 58.129 39.130 0.00 0.00 34.60 2.71
9791 15265 5.271598 TGAGCCAGATCCCAAAATATTGTT 58.728 37.500 0.00 0.00 34.60 2.83
9792 15266 5.721000 TGAGCCAGATCCCAAAATATTGTTT 59.279 36.000 0.00 0.00 34.60 2.83
9793 15267 6.213195 TGAGCCAGATCCCAAAATATTGTTTT 59.787 34.615 0.00 0.00 34.60 2.43
9794 15268 7.398618 TGAGCCAGATCCCAAAATATTGTTTTA 59.601 33.333 0.00 0.00 34.60 1.52
9795 15269 7.785033 AGCCAGATCCCAAAATATTGTTTTAG 58.215 34.615 0.00 0.00 34.60 1.85
9796 15270 6.986231 GCCAGATCCCAAAATATTGTTTTAGG 59.014 38.462 0.00 0.00 34.60 2.69
9797 15271 7.500141 CCAGATCCCAAAATATTGTTTTAGGG 58.500 38.462 14.41 14.41 34.60 3.53
9798 15272 7.125659 CCAGATCCCAAAATATTGTTTTAGGGT 59.874 37.037 17.38 7.10 34.39 4.34
9799 15273 9.196139 CAGATCCCAAAATATTGTTTTAGGGTA 57.804 33.333 17.38 10.26 34.39 3.69
9800 15274 9.777008 AGATCCCAAAATATTGTTTTAGGGTAA 57.223 29.630 17.38 7.42 34.39 2.85
9801 15275 9.811995 GATCCCAAAATATTGTTTTAGGGTAAC 57.188 33.333 17.38 10.98 34.39 2.50
9802 15276 8.722622 TCCCAAAATATTGTTTTAGGGTAACA 57.277 30.769 17.38 0.00 34.39 2.41
9803 15277 8.808092 TCCCAAAATATTGTTTTAGGGTAACAG 58.192 33.333 17.38 0.00 36.89 3.16
9804 15278 8.038351 CCCAAAATATTGTTTTAGGGTAACAGG 58.962 37.037 13.25 0.00 36.89 4.00
9805 15279 7.547722 CCAAAATATTGTTTTAGGGTAACAGGC 59.452 37.037 0.00 0.00 36.89 4.85
9806 15280 7.784470 AAATATTGTTTTAGGGTAACAGGCA 57.216 32.000 0.00 0.00 36.89 4.75
9807 15281 6.769134 ATATTGTTTTAGGGTAACAGGCAC 57.231 37.500 0.00 0.00 36.89 5.01
9808 15282 2.866351 TGTTTTAGGGTAACAGGCACC 58.134 47.619 0.00 0.00 39.74 5.01
9894 15370 5.920193 AAAATGATCCACGGTTTCATCAT 57.080 34.783 0.00 1.97 37.54 2.45
9914 15390 6.090483 TCATTTCCAAATTAGCCGACAAAA 57.910 33.333 0.00 0.00 0.00 2.44
9915 15391 6.516718 TCATTTCCAAATTAGCCGACAAAAA 58.483 32.000 0.00 0.00 0.00 1.94
9916 15392 6.644592 TCATTTCCAAATTAGCCGACAAAAAG 59.355 34.615 0.00 0.00 0.00 2.27
9917 15393 5.776173 TTCCAAATTAGCCGACAAAAAGA 57.224 34.783 0.00 0.00 0.00 2.52
9918 15394 5.116069 TCCAAATTAGCCGACAAAAAGAC 57.884 39.130 0.00 0.00 0.00 3.01
9921 15397 5.572896 CCAAATTAGCCGACAAAAAGACATC 59.427 40.000 0.00 0.00 0.00 3.06
9922 15398 4.965119 ATTAGCCGACAAAAAGACATCC 57.035 40.909 0.00 0.00 0.00 3.51
9925 15401 1.136057 GCCGACAAAAAGACATCCGTC 60.136 52.381 0.00 0.00 42.95 4.79
9957 15433 2.649034 GTCGCACGTGAGGGAAGA 59.351 61.111 22.23 5.01 35.60 2.87
9958 15434 1.006571 GTCGCACGTGAGGGAAGAA 60.007 57.895 22.23 0.00 35.60 2.52
9959 15435 0.599204 GTCGCACGTGAGGGAAGAAA 60.599 55.000 22.23 0.00 35.60 2.52
9960 15436 0.320374 TCGCACGTGAGGGAAGAAAT 59.680 50.000 22.23 0.00 35.60 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 82 7.548097 ACTAGTGTATGTTACTCTCCATTGTG 58.452 38.462 0.00 0.00 34.65 3.33
81 85 9.251440 TGTTACTAGTGTATGTTACTCTCCATT 57.749 33.333 5.39 0.00 34.65 3.16
114 118 8.152898 TGAAGGTAGTAACATAGTCTAGCGATA 58.847 37.037 0.00 0.00 37.29 2.92
115 119 6.996879 TGAAGGTAGTAACATAGTCTAGCGAT 59.003 38.462 0.00 0.00 37.29 4.58
117 121 6.615264 TGAAGGTAGTAACATAGTCTAGCG 57.385 41.667 0.00 0.00 37.29 4.26
121 125 8.904834 CACACTATGAAGGTAGTAACATAGTCT 58.095 37.037 13.37 2.98 46.61 3.24
122 126 8.136165 CCACACTATGAAGGTAGTAACATAGTC 58.864 40.741 13.37 0.00 46.61 2.59
125 129 7.966339 ACCACACTATGAAGGTAGTAACATA 57.034 36.000 0.00 0.00 33.29 2.29
126 130 6.869206 ACCACACTATGAAGGTAGTAACAT 57.131 37.500 0.00 0.00 33.29 2.71
128 132 8.004087 TGATACCACACTATGAAGGTAGTAAC 57.996 38.462 0.00 0.00 35.97 2.50
130 134 7.255836 GCATGATACCACACTATGAAGGTAGTA 60.256 40.741 0.00 0.00 35.97 1.82
132 136 5.928839 GCATGATACCACACTATGAAGGTAG 59.071 44.000 0.00 0.00 35.97 3.18
133 137 5.365314 TGCATGATACCACACTATGAAGGTA 59.635 40.000 0.00 0.00 36.55 3.08
135 139 4.707105 TGCATGATACCACACTATGAAGG 58.293 43.478 0.00 0.00 0.00 3.46
136 140 6.317140 ACTTTGCATGATACCACACTATGAAG 59.683 38.462 0.00 0.00 0.00 3.02
139 143 6.441093 AACTTTGCATGATACCACACTATG 57.559 37.500 0.00 0.00 0.00 2.23
141 145 6.000840 TGAAACTTTGCATGATACCACACTA 58.999 36.000 0.00 0.00 0.00 2.74
142 146 4.826733 TGAAACTTTGCATGATACCACACT 59.173 37.500 0.00 0.00 0.00 3.55
144 148 5.981088 ATGAAACTTTGCATGATACCACA 57.019 34.783 0.00 0.00 0.00 4.17
145 149 8.931385 ATAAATGAAACTTTGCATGATACCAC 57.069 30.769 0.00 0.00 0.00 4.16
172 176 9.935241 CAATGCAATAGTATGAGTCTATAACCT 57.065 33.333 0.00 0.00 0.00 3.50
176 180 8.531982 GTCCCAATGCAATAGTATGAGTCTATA 58.468 37.037 0.00 0.00 0.00 1.31
177 181 7.016563 TGTCCCAATGCAATAGTATGAGTCTAT 59.983 37.037 0.00 0.00 0.00 1.98
178 182 6.326323 TGTCCCAATGCAATAGTATGAGTCTA 59.674 38.462 0.00 0.00 0.00 2.59
179 183 5.130975 TGTCCCAATGCAATAGTATGAGTCT 59.869 40.000 0.00 0.00 0.00 3.24
181 185 5.372343 TGTCCCAATGCAATAGTATGAGT 57.628 39.130 0.00 0.00 0.00 3.41
183 187 5.532032 CACATGTCCCAATGCAATAGTATGA 59.468 40.000 0.00 0.00 0.00 2.15
184 188 5.532032 TCACATGTCCCAATGCAATAGTATG 59.468 40.000 0.00 0.00 0.00 2.39
187 191 3.966979 TCACATGTCCCAATGCAATAGT 58.033 40.909 0.00 0.00 0.00 2.12
189 193 4.279982 ACATCACATGTCCCAATGCAATA 58.720 39.130 0.00 0.00 39.92 1.90
191 195 2.527497 ACATCACATGTCCCAATGCAA 58.473 42.857 0.00 0.00 39.92 4.08
192 196 2.219080 ACATCACATGTCCCAATGCA 57.781 45.000 0.00 0.00 39.92 3.96
194 198 4.701651 ACTGTAACATCACATGTCCCAATG 59.298 41.667 0.00 0.45 44.07 2.82
196 200 4.365514 ACTGTAACATCACATGTCCCAA 57.634 40.909 0.00 0.00 44.07 4.12
197 201 5.012664 AGTTACTGTAACATCACATGTCCCA 59.987 40.000 27.12 0.00 44.07 4.37
198 202 5.488341 AGTTACTGTAACATCACATGTCCC 58.512 41.667 27.12 1.55 44.07 4.46
199 203 6.255887 GCTAGTTACTGTAACATCACATGTCC 59.744 42.308 27.12 1.73 44.07 4.02
202 206 8.926715 TTAGCTAGTTACTGTAACATCACATG 57.073 34.615 27.12 12.57 41.07 3.21
203 207 8.198109 CCTTAGCTAGTTACTGTAACATCACAT 58.802 37.037 27.12 11.85 41.07 3.21
204 208 7.544622 CCTTAGCTAGTTACTGTAACATCACA 58.455 38.462 27.12 10.61 41.07 3.58
206 210 6.570692 GCCTTAGCTAGTTACTGTAACATCA 58.429 40.000 27.12 13.90 37.28 3.07
223 227 1.202698 CCCACTATGACCAGCCTTAGC 60.203 57.143 0.00 0.00 40.32 3.09
225 229 2.292918 ACTCCCACTATGACCAGCCTTA 60.293 50.000 0.00 0.00 0.00 2.69
227 231 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
228 232 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
234 238 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
235 239 8.701908 TTACTACCTATGTTACTCCCACTATG 57.298 38.462 0.00 0.00 0.00 2.23
236 240 9.364653 CTTTACTACCTATGTTACTCCCACTAT 57.635 37.037 0.00 0.00 0.00 2.12
237 241 7.286316 GCTTTACTACCTATGTTACTCCCACTA 59.714 40.741 0.00 0.00 0.00 2.74
238 242 6.097981 GCTTTACTACCTATGTTACTCCCACT 59.902 42.308 0.00 0.00 0.00 4.00
240 244 5.959594 TGCTTTACTACCTATGTTACTCCCA 59.040 40.000 0.00 0.00 0.00 4.37
241 245 6.475596 TGCTTTACTACCTATGTTACTCCC 57.524 41.667 0.00 0.00 0.00 4.30
245 249 9.223099 TCCTTTTTGCTTTACTACCTATGTTAC 57.777 33.333 0.00 0.00 0.00 2.50
247 251 8.739972 CATCCTTTTTGCTTTACTACCTATGTT 58.260 33.333 0.00 0.00 0.00 2.71
248 252 8.107095 TCATCCTTTTTGCTTTACTACCTATGT 58.893 33.333 0.00 0.00 0.00 2.29
250 254 9.125026 CATCATCCTTTTTGCTTTACTACCTAT 57.875 33.333 0.00 0.00 0.00 2.57
251 255 8.107095 ACATCATCCTTTTTGCTTTACTACCTA 58.893 33.333 0.00 0.00 0.00 3.08
256 260 6.265196 TGACACATCATCCTTTTTGCTTTACT 59.735 34.615 0.00 0.00 0.00 2.24
258 262 6.647334 TGACACATCATCCTTTTTGCTTTA 57.353 33.333 0.00 0.00 0.00 1.85
260 264 5.069516 ACTTGACACATCATCCTTTTTGCTT 59.930 36.000 0.00 0.00 33.85 3.91
261 265 4.586001 ACTTGACACATCATCCTTTTTGCT 59.414 37.500 0.00 0.00 33.85 3.91
269 273 8.562892 CCTCATTAATTACTTGACACATCATCC 58.437 37.037 0.00 0.00 33.85 3.51
272 276 8.539544 TCTCCTCATTAATTACTTGACACATCA 58.460 33.333 0.00 0.00 0.00 3.07
274 278 8.762645 TCTCTCCTCATTAATTACTTGACACAT 58.237 33.333 0.00 0.00 0.00 3.21
276 280 7.708752 CCTCTCTCCTCATTAATTACTTGACAC 59.291 40.741 0.00 0.00 0.00 3.67
277 281 7.633772 GCCTCTCTCCTCATTAATTACTTGACA 60.634 40.741 0.00 0.00 0.00 3.58
278 282 6.704050 GCCTCTCTCCTCATTAATTACTTGAC 59.296 42.308 0.00 0.00 0.00 3.18
279 283 6.384015 TGCCTCTCTCCTCATTAATTACTTGA 59.616 38.462 0.00 0.00 0.00 3.02
281 285 6.814954 TGCCTCTCTCCTCATTAATTACTT 57.185 37.500 0.00 0.00 0.00 2.24
282 286 6.814954 TTGCCTCTCTCCTCATTAATTACT 57.185 37.500 0.00 0.00 0.00 2.24
285 289 8.038862 TCTATTTGCCTCTCTCCTCATTAATT 57.961 34.615 0.00 0.00 0.00 1.40
286 290 7.292120 ACTCTATTTGCCTCTCTCCTCATTAAT 59.708 37.037 0.00 0.00 0.00 1.40
289 293 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
290 294 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
292 296 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
293 297 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
294 298 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
323 327 3.002348 GGAAAGCGCTATGTGATGGTAAC 59.998 47.826 12.05 0.00 0.00 2.50
324 328 3.202906 GGAAAGCGCTATGTGATGGTAA 58.797 45.455 12.05 0.00 0.00 2.85
325 329 2.169561 TGGAAAGCGCTATGTGATGGTA 59.830 45.455 12.05 0.00 0.00 3.25
326 330 1.065491 TGGAAAGCGCTATGTGATGGT 60.065 47.619 12.05 0.00 0.00 3.55
328 332 3.624900 CATTGGAAAGCGCTATGTGATG 58.375 45.455 12.05 9.43 0.00 3.07
329 333 2.033801 GCATTGGAAAGCGCTATGTGAT 59.966 45.455 12.05 0.00 0.00 3.06
330 334 1.401552 GCATTGGAAAGCGCTATGTGA 59.598 47.619 12.05 0.00 0.00 3.58
332 336 1.462616 TGCATTGGAAAGCGCTATGT 58.537 45.000 12.05 0.00 0.00 2.29
336 340 2.070783 CATTTTGCATTGGAAAGCGCT 58.929 42.857 2.64 2.64 0.00 5.92
338 342 3.319755 ACTCATTTTGCATTGGAAAGCG 58.680 40.909 3.51 0.23 0.00 4.68
339 343 4.563061 AGACTCATTTTGCATTGGAAAGC 58.437 39.130 3.51 0.00 0.00 3.51
342 346 6.647334 TTGTAGACTCATTTTGCATTGGAA 57.353 33.333 0.00 0.00 0.00 3.53
346 350 6.088016 TGCTTTGTAGACTCATTTTGCATT 57.912 33.333 0.00 0.00 0.00 3.56
347 351 5.710513 TGCTTTGTAGACTCATTTTGCAT 57.289 34.783 0.00 0.00 0.00 3.96
349 353 8.519492 TTTATTGCTTTGTAGACTCATTTTGC 57.481 30.769 0.00 0.00 0.00 3.68
355 359 8.846943 TCTTCATTTATTGCTTTGTAGACTCA 57.153 30.769 0.00 0.00 0.00 3.41
387 391 8.036575 GTGGGTACTAACATAAGTGTGATAACA 58.963 37.037 0.00 0.00 38.92 2.41
388 392 8.255905 AGTGGGTACTAACATAAGTGTGATAAC 58.744 37.037 0.00 0.00 38.92 1.89
391 395 6.869206 AGTGGGTACTAACATAAGTGTGAT 57.131 37.500 0.00 0.00 38.92 3.06
393 397 7.778083 TCATAGTGGGTACTAACATAAGTGTG 58.222 38.462 0.00 0.00 42.37 3.82
394 398 7.966339 TCATAGTGGGTACTAACATAAGTGT 57.034 36.000 0.00 0.00 42.37 3.55
395 399 7.926555 CCTTCATAGTGGGTACTAACATAAGTG 59.073 40.741 0.00 0.00 42.37 3.16
396 400 7.622479 ACCTTCATAGTGGGTACTAACATAAGT 59.378 37.037 0.00 0.00 42.37 2.24
397 401 8.019656 ACCTTCATAGTGGGTACTAACATAAG 57.980 38.462 0.00 0.00 42.37 1.73
398 402 7.983166 ACCTTCATAGTGGGTACTAACATAA 57.017 36.000 0.00 0.00 42.37 1.90
400 404 7.130775 ACTACCTTCATAGTGGGTACTAACAT 58.869 38.462 0.00 0.00 42.37 2.71
401 405 6.496743 ACTACCTTCATAGTGGGTACTAACA 58.503 40.000 0.00 0.00 42.37 2.41
402 406 8.409371 GTTACTACCTTCATAGTGGGTACTAAC 58.591 40.741 0.00 0.00 42.37 2.34
404 408 7.642186 TGTTACTACCTTCATAGTGGGTACTA 58.358 38.462 0.00 0.00 43.19 1.82
405 409 6.496743 TGTTACTACCTTCATAGTGGGTACT 58.503 40.000 0.00 0.00 40.99 2.73
406 410 6.780457 TGTTACTACCTTCATAGTGGGTAC 57.220 41.667 0.00 0.00 36.09 3.34
407 411 8.505246 TCTATGTTACTACCTTCATAGTGGGTA 58.495 37.037 0.00 0.00 40.01 3.69
408 412 7.287235 GTCTATGTTACTACCTTCATAGTGGGT 59.713 40.741 0.00 0.00 40.01 4.51
410 414 8.466617 AGTCTATGTTACTACCTTCATAGTGG 57.533 38.462 0.00 0.00 40.01 4.00
416 420 9.964354 TGTTACTAGTCTATGTTACTACCTTCA 57.036 33.333 0.00 0.00 0.00 3.02
419 423 9.917887 ACATGTTACTAGTCTATGTTACTACCT 57.082 33.333 0.00 0.00 0.00 3.08
420 424 9.947669 CACATGTTACTAGTCTATGTTACTACC 57.052 37.037 13.72 0.00 30.15 3.18
422 426 9.181061 TGCACATGTTACTAGTCTATGTTACTA 57.819 33.333 13.72 0.00 30.15 1.82
423 427 8.063200 TGCACATGTTACTAGTCTATGTTACT 57.937 34.615 13.72 0.00 30.15 2.24
424 428 8.755941 CATGCACATGTTACTAGTCTATGTTAC 58.244 37.037 13.72 10.81 34.23 2.50
425 429 8.871686 CATGCACATGTTACTAGTCTATGTTA 57.128 34.615 13.72 8.80 34.23 2.41
426 430 7.776933 CATGCACATGTTACTAGTCTATGTT 57.223 36.000 13.72 2.22 34.23 2.71
442 446 8.260818 AGTAACTTAGACTAATGACATGCACAT 58.739 33.333 0.00 0.00 0.00 3.21
443 447 7.611770 AGTAACTTAGACTAATGACATGCACA 58.388 34.615 0.00 0.00 0.00 4.57
444 448 7.222999 GGAGTAACTTAGACTAATGACATGCAC 59.777 40.741 0.00 0.00 0.00 4.57
445 449 7.265673 GGAGTAACTTAGACTAATGACATGCA 58.734 38.462 0.00 0.00 0.00 3.96
446 450 6.702282 GGGAGTAACTTAGACTAATGACATGC 59.298 42.308 0.00 0.00 0.00 4.06
447 451 7.147724 TGGGGAGTAACTTAGACTAATGACATG 60.148 40.741 0.00 0.00 0.00 3.21
448 452 6.901300 TGGGGAGTAACTTAGACTAATGACAT 59.099 38.462 0.00 0.00 0.00 3.06
450 454 6.380560 AGTGGGGAGTAACTTAGACTAATGAC 59.619 42.308 0.00 0.00 0.00 3.06
453 457 8.287350 TCATAGTGGGGAGTAACTTAGACTAAT 58.713 37.037 0.00 0.00 0.00 1.73
454 458 7.559170 GTCATAGTGGGGAGTAACTTAGACTAA 59.441 40.741 0.00 0.00 31.58 2.24
456 460 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
457 461 5.892686 AGTCATAGTGGGGAGTAACTTAGAC 59.107 44.000 0.00 0.00 33.07 2.59
458 462 6.088541 AGTCATAGTGGGGAGTAACTTAGA 57.911 41.667 0.00 0.00 0.00 2.10
460 464 5.832060 GCTAGTCATAGTGGGGAGTAACTTA 59.168 44.000 0.00 0.00 0.00 2.24
461 465 4.650131 GCTAGTCATAGTGGGGAGTAACTT 59.350 45.833 0.00 0.00 0.00 2.66
462 466 4.216708 GCTAGTCATAGTGGGGAGTAACT 58.783 47.826 0.00 0.00 0.00 2.24
465 469 2.789992 AGGCTAGTCATAGTGGGGAGTA 59.210 50.000 0.00 0.00 0.00 2.59
467 471 2.390225 AGGCTAGTCATAGTGGGGAG 57.610 55.000 0.00 0.00 0.00 4.30
468 472 3.206866 ACTTAGGCTAGTCATAGTGGGGA 59.793 47.826 0.00 0.00 0.00 4.81
469 473 3.574826 GACTTAGGCTAGTCATAGTGGGG 59.425 52.174 15.00 0.00 43.23 4.96
470 474 4.857509 GACTTAGGCTAGTCATAGTGGG 57.142 50.000 15.00 0.00 43.23 4.61
479 483 3.901844 TGGTTTCAGTGACTTAGGCTAGT 59.098 43.478 0.00 0.00 0.00 2.57
481 485 4.081087 GGATGGTTTCAGTGACTTAGGCTA 60.081 45.833 0.00 0.00 0.00 3.93
483 487 3.010420 GGATGGTTTCAGTGACTTAGGC 58.990 50.000 0.00 0.00 0.00 3.93
484 488 3.264450 AGGGATGGTTTCAGTGACTTAGG 59.736 47.826 0.00 0.00 0.00 2.69
485 489 4.223923 AGAGGGATGGTTTCAGTGACTTAG 59.776 45.833 0.00 0.00 0.00 2.18
486 490 4.168101 AGAGGGATGGTTTCAGTGACTTA 58.832 43.478 0.00 0.00 0.00 2.24
490 494 1.909302 GGAGAGGGATGGTTTCAGTGA 59.091 52.381 0.00 0.00 0.00 3.41
491 495 1.912043 AGGAGAGGGATGGTTTCAGTG 59.088 52.381 0.00 0.00 0.00 3.66
492 496 2.192263 GAGGAGAGGGATGGTTTCAGT 58.808 52.381 0.00 0.00 0.00 3.41
494 498 2.342406 TGAGGAGAGGGATGGTTTCA 57.658 50.000 0.00 0.00 0.00 2.69
495 499 3.941704 AATGAGGAGAGGGATGGTTTC 57.058 47.619 0.00 0.00 0.00 2.78
496 500 4.111577 TGTAATGAGGAGAGGGATGGTTT 58.888 43.478 0.00 0.00 0.00 3.27
497 501 3.736094 TGTAATGAGGAGAGGGATGGTT 58.264 45.455 0.00 0.00 0.00 3.67
498 502 3.421394 TGTAATGAGGAGAGGGATGGT 57.579 47.619 0.00 0.00 0.00 3.55
499 503 4.989875 ATTGTAATGAGGAGAGGGATGG 57.010 45.455 0.00 0.00 0.00 3.51
500 504 5.933617 TGAATTGTAATGAGGAGAGGGATG 58.066 41.667 0.00 0.00 0.00 3.51
501 505 6.776887 ATGAATTGTAATGAGGAGAGGGAT 57.223 37.500 0.00 0.00 0.00 3.85
502 506 6.359804 CAATGAATTGTAATGAGGAGAGGGA 58.640 40.000 0.00 0.00 33.22 4.20
504 508 5.009410 GGCAATGAATTGTAATGAGGAGAGG 59.991 44.000 5.02 0.00 39.88 3.69
505 509 5.591472 TGGCAATGAATTGTAATGAGGAGAG 59.409 40.000 5.02 0.00 39.88 3.20
506 510 5.357878 GTGGCAATGAATTGTAATGAGGAGA 59.642 40.000 5.02 0.00 39.88 3.71
507 511 5.125900 TGTGGCAATGAATTGTAATGAGGAG 59.874 40.000 5.02 0.00 39.88 3.69
508 512 5.015515 TGTGGCAATGAATTGTAATGAGGA 58.984 37.500 5.02 0.00 39.88 3.71
509 513 5.327616 TGTGGCAATGAATTGTAATGAGG 57.672 39.130 5.02 0.00 39.88 3.86
510 514 7.168637 GCTTATGTGGCAATGAATTGTAATGAG 59.831 37.037 5.02 2.49 39.88 2.90
511 515 6.979817 GCTTATGTGGCAATGAATTGTAATGA 59.020 34.615 5.02 0.00 39.88 2.57
512 516 6.757478 TGCTTATGTGGCAATGAATTGTAATG 59.243 34.615 5.02 0.00 39.88 1.90
513 517 6.876155 TGCTTATGTGGCAATGAATTGTAAT 58.124 32.000 5.02 0.00 39.88 1.89
514 518 6.278172 TGCTTATGTGGCAATGAATTGTAA 57.722 33.333 5.02 0.00 39.88 2.41
516 520 4.804868 TGCTTATGTGGCAATGAATTGT 57.195 36.364 5.02 0.00 39.88 2.71
517 521 5.172934 ACTTGCTTATGTGGCAATGAATTG 58.827 37.500 1.64 0.00 46.46 2.32
518 522 5.410355 ACTTGCTTATGTGGCAATGAATT 57.590 34.783 1.64 0.00 46.46 2.17
519 523 5.410355 AACTTGCTTATGTGGCAATGAAT 57.590 34.783 1.64 0.00 46.46 2.57
520 524 4.870123 AACTTGCTTATGTGGCAATGAA 57.130 36.364 1.64 0.00 46.46 2.57
521 525 4.870123 AAACTTGCTTATGTGGCAATGA 57.130 36.364 1.64 0.00 46.46 2.57
523 527 5.476599 TCAGTAAACTTGCTTATGTGGCAAT 59.523 36.000 1.64 0.00 46.46 3.56
524 528 4.824537 TCAGTAAACTTGCTTATGTGGCAA 59.175 37.500 0.00 0.00 45.70 4.52
525 529 4.393834 TCAGTAAACTTGCTTATGTGGCA 58.606 39.130 0.00 0.00 37.97 4.92
526 530 4.455877 ACTCAGTAAACTTGCTTATGTGGC 59.544 41.667 0.00 0.00 0.00 5.01
527 531 6.373779 CAACTCAGTAAACTTGCTTATGTGG 58.626 40.000 0.00 0.00 0.00 4.17
529 533 6.204882 GTCCAACTCAGTAAACTTGCTTATGT 59.795 38.462 0.00 0.00 0.00 2.29
530 534 6.428159 AGTCCAACTCAGTAAACTTGCTTATG 59.572 38.462 0.00 0.00 0.00 1.90
531 535 6.534634 AGTCCAACTCAGTAAACTTGCTTAT 58.465 36.000 0.00 0.00 0.00 1.73
532 536 5.925509 AGTCCAACTCAGTAAACTTGCTTA 58.074 37.500 0.00 0.00 0.00 3.09
534 538 4.381411 GAGTCCAACTCAGTAAACTTGCT 58.619 43.478 2.28 0.00 44.45 3.91
536 540 4.617959 TCGAGTCCAACTCAGTAAACTTG 58.382 43.478 7.78 0.00 45.30 3.16
537 541 4.931661 TCGAGTCCAACTCAGTAAACTT 57.068 40.909 7.78 0.00 45.30 2.66
539 543 4.557205 ACATCGAGTCCAACTCAGTAAAC 58.443 43.478 7.78 0.00 45.30 2.01
540 544 4.866508 ACATCGAGTCCAACTCAGTAAA 57.133 40.909 7.78 0.00 45.30 2.01
541 545 4.866508 AACATCGAGTCCAACTCAGTAA 57.133 40.909 7.78 0.00 45.30 2.24
542 546 5.008331 AGTAACATCGAGTCCAACTCAGTA 58.992 41.667 7.78 0.00 45.30 2.74
543 547 3.827302 AGTAACATCGAGTCCAACTCAGT 59.173 43.478 7.78 0.61 45.30 3.41
544 548 4.169508 CAGTAACATCGAGTCCAACTCAG 58.830 47.826 7.78 1.37 45.30 3.35
546 550 4.175787 ACAGTAACATCGAGTCCAACTC 57.824 45.455 0.00 0.00 41.71 3.01
548 552 4.304110 TCAACAGTAACATCGAGTCCAAC 58.696 43.478 0.00 0.00 0.00 3.77
549 553 4.594123 TCAACAGTAACATCGAGTCCAA 57.406 40.909 0.00 0.00 0.00 3.53
550 554 4.594123 TTCAACAGTAACATCGAGTCCA 57.406 40.909 0.00 0.00 0.00 4.02
551 555 6.481954 AATTTCAACAGTAACATCGAGTCC 57.518 37.500 0.00 0.00 0.00 3.85
552 556 9.690434 GAATAATTTCAACAGTAACATCGAGTC 57.310 33.333 0.00 0.00 0.00 3.36
553 557 9.436957 AGAATAATTTCAACAGTAACATCGAGT 57.563 29.630 0.00 0.00 34.08 4.18
556 560 7.370836 GCGAGAATAATTTCAACAGTAACATCG 59.629 37.037 0.00 0.00 34.08 3.84
557 561 8.391106 AGCGAGAATAATTTCAACAGTAACATC 58.609 33.333 0.00 0.00 34.08 3.06
558 562 8.177663 CAGCGAGAATAATTTCAACAGTAACAT 58.822 33.333 0.00 0.00 34.08 2.71
560 564 7.478667 CACAGCGAGAATAATTTCAACAGTAAC 59.521 37.037 0.00 0.00 34.08 2.50
561 565 7.360861 CCACAGCGAGAATAATTTCAACAGTAA 60.361 37.037 0.00 0.00 34.08 2.24
562 566 6.092122 CCACAGCGAGAATAATTTCAACAGTA 59.908 38.462 0.00 0.00 34.08 2.74
563 567 5.106555 CCACAGCGAGAATAATTTCAACAGT 60.107 40.000 0.00 0.00 34.08 3.55
565 569 4.379394 GCCACAGCGAGAATAATTTCAACA 60.379 41.667 0.00 0.00 34.08 3.33
566 570 4.098416 GCCACAGCGAGAATAATTTCAAC 58.902 43.478 0.00 0.00 34.08 3.18
567 571 4.009675 AGCCACAGCGAGAATAATTTCAA 58.990 39.130 0.00 0.00 46.67 2.69
568 572 3.609853 AGCCACAGCGAGAATAATTTCA 58.390 40.909 0.00 0.00 46.67 2.69
570 574 5.428253 TCTTAGCCACAGCGAGAATAATTT 58.572 37.500 0.00 0.00 46.67 1.82
571 575 5.023533 TCTTAGCCACAGCGAGAATAATT 57.976 39.130 0.00 0.00 46.67 1.40
573 577 3.699538 TCTCTTAGCCACAGCGAGAATAA 59.300 43.478 0.00 0.00 46.67 1.40
574 578 3.288092 TCTCTTAGCCACAGCGAGAATA 58.712 45.455 0.00 0.00 46.67 1.75
575 579 2.103373 TCTCTTAGCCACAGCGAGAAT 58.897 47.619 0.00 0.00 46.67 2.40
576 580 1.545841 TCTCTTAGCCACAGCGAGAA 58.454 50.000 0.00 0.00 46.67 2.87
577 581 1.769026 ATCTCTTAGCCACAGCGAGA 58.231 50.000 0.00 0.00 46.67 4.04
578 582 3.932545 ATATCTCTTAGCCACAGCGAG 57.067 47.619 0.00 0.00 46.67 5.03
579 583 4.672587 AAATATCTCTTAGCCACAGCGA 57.327 40.909 0.00 0.00 46.67 4.93
580 584 6.646653 TGATAAAATATCTCTTAGCCACAGCG 59.353 38.462 0.00 0.00 46.67 5.18
581 585 7.969536 TGATAAAATATCTCTTAGCCACAGC 57.030 36.000 0.00 0.00 40.32 4.40
710 719 4.408596 TGTAGTGTCATTAGATCCCATGCA 59.591 41.667 0.00 0.00 0.00 3.96
711 720 4.960938 TGTAGTGTCATTAGATCCCATGC 58.039 43.478 0.00 0.00 0.00 4.06
877 886 0.802494 GTGTGCGTGGGACTTAATGG 59.198 55.000 0.00 0.00 0.00 3.16
962 976 2.072298 CTTGTACTGGCTTGAGCACTC 58.928 52.381 5.24 0.00 44.36 3.51
1011 1025 2.802106 CCGCTCTCGTTCCTCCTC 59.198 66.667 0.00 0.00 0.00 3.71
1169 1202 6.292919 CGTACATAGATCAGATGAACACTCGA 60.293 42.308 13.04 0.00 0.00 4.04
1197 1230 1.336795 TGAATCGAAGAAGAGCGCACA 60.337 47.619 11.47 0.00 43.58 4.57
1268 1301 3.720818 GCTGCAACAAATATGTCGAATCG 59.279 43.478 0.00 0.00 39.40 3.34
1274 1307 4.990257 ACTCATGCTGCAACAAATATGTC 58.010 39.130 6.36 0.00 39.40 3.06
1303 1340 3.216800 TGATCAAGCTCATGGGCAATAC 58.783 45.455 22.09 7.54 34.17 1.89
1442 1481 4.212004 CGAGATCTTGTCAACTTCAAAGCA 59.788 41.667 0.00 0.00 0.00 3.91
1536 1575 2.067453 GACATCGAACTACGCGCTGC 62.067 60.000 5.73 0.00 42.26 5.25
1553 1592 4.413495 TTTTACATGTAAAGCTGCCGAC 57.587 40.909 25.62 0.00 36.52 4.79
1604 1643 2.228822 GTCCCTGTAACTGCAAACCATG 59.771 50.000 0.00 0.00 0.00 3.66
1668 1707 2.561419 CTCACCTGAAGACGGAACCTTA 59.439 50.000 0.00 0.00 0.00 2.69
1701 1740 4.259810 CGTTAACAATCCAGAGTGCATACG 60.260 45.833 6.39 0.00 0.00 3.06
1737 1779 2.100418 AGGACGTAGCGGGAAGTTAATC 59.900 50.000 0.00 0.00 0.00 1.75
1852 1898 3.963428 ACTGTAGCTCGGTCAAAGATT 57.037 42.857 0.00 0.00 0.00 2.40
1904 1950 2.298729 ACCATTGTTGTTAGCGCCAATT 59.701 40.909 2.29 0.00 0.00 2.32
2006 2052 1.734477 CTCTGTCCGCACCGACAAG 60.734 63.158 0.60 0.00 42.06 3.16
2018 2064 7.484959 CGGCAAAAGAATAAAATTACCTCTGTC 59.515 37.037 0.00 0.00 0.00 3.51
2052 2098 6.869913 TCTGCAGAGAAAAAGGCAATTAATTG 59.130 34.615 21.54 21.54 40.66 2.32
2060 2106 1.603802 CGTTCTGCAGAGAAAAAGGCA 59.396 47.619 17.43 0.00 40.00 4.75
2061 2107 1.068954 CCGTTCTGCAGAGAAAAAGGC 60.069 52.381 17.43 0.84 40.00 4.35
2068 2114 3.321111 ACTTAACTTCCGTTCTGCAGAGA 59.679 43.478 17.43 8.33 34.59 3.10
2069 2115 3.654414 ACTTAACTTCCGTTCTGCAGAG 58.346 45.455 17.43 6.23 34.59 3.35
2142 2197 5.180117 TGGTACGGAGCGAGTATTATAGAAC 59.820 44.000 0.00 0.00 0.00 3.01
2421 2704 4.127171 CCCATACTCCATACCTCAAAACG 58.873 47.826 0.00 0.00 0.00 3.60
2433 2716 8.096621 TCTATTTCATTGTAACCCATACTCCA 57.903 34.615 0.00 0.00 35.42 3.86
2441 2724 5.470437 GCTAGGCTCTATTTCATTGTAACCC 59.530 44.000 0.00 0.00 0.00 4.11
2442 2725 6.292150 AGCTAGGCTCTATTTCATTGTAACC 58.708 40.000 0.00 0.00 30.62 2.85
2470 2762 3.438087 ACAATGGTTGAGATCAGCTTTCG 59.562 43.478 0.00 0.00 0.00 3.46
2481 2773 5.132502 TGCCTGGATTATACAATGGTTGAG 58.867 41.667 0.00 0.00 0.00 3.02
2483 2775 5.850557 TTGCCTGGATTATACAATGGTTG 57.149 39.130 0.00 0.00 0.00 3.77
2487 2779 9.683069 GAGTTAAATTGCCTGGATTATACAATG 57.317 33.333 0.00 0.00 31.64 2.82
2490 2782 6.485313 CGGAGTTAAATTGCCTGGATTATACA 59.515 38.462 0.00 0.00 0.00 2.29
2491 2783 6.567891 GCGGAGTTAAATTGCCTGGATTATAC 60.568 42.308 0.00 0.00 0.00 1.47
2493 2785 4.278419 GCGGAGTTAAATTGCCTGGATTAT 59.722 41.667 0.00 0.00 0.00 1.28
2782 3077 1.445582 GAAGGTGGTGCTCGTACGG 60.446 63.158 16.52 7.41 0.00 4.02
2794 3089 1.026718 GGTTGATGCGGGAGAAGGTG 61.027 60.000 0.00 0.00 0.00 4.00
2840 3186 2.359975 GGGGGAGAAGGTTGTGCG 60.360 66.667 0.00 0.00 0.00 5.34
2907 3253 0.242017 GGTGTCTGGTTGCTTGATGC 59.758 55.000 0.00 0.00 43.25 3.91
2958 3304 3.680525 CGTCTCGTCGCTTGATGG 58.319 61.111 0.00 0.00 0.00 3.51
2967 3313 4.517703 CTCGACCGGCGTCTCGTC 62.518 72.222 19.53 12.57 41.80 4.20
2978 3324 2.104530 GCTTCTACGGCCTCGACC 59.895 66.667 0.00 0.00 40.11 4.79
2979 3325 1.516603 GTGCTTCTACGGCCTCGAC 60.517 63.158 0.00 0.00 40.11 4.20
2980 3326 2.707849 GGTGCTTCTACGGCCTCGA 61.708 63.158 0.00 0.00 40.11 4.04
2981 3327 2.202756 GGTGCTTCTACGGCCTCG 60.203 66.667 0.00 0.00 43.02 4.63
2983 3329 2.663196 GTGGTGCTTCTACGGCCT 59.337 61.111 0.00 0.00 0.00 5.19
2985 3331 0.605589 AAAGGTGGTGCTTCTACGGC 60.606 55.000 0.00 0.00 0.00 5.68
2986 3332 1.804748 GAAAAGGTGGTGCTTCTACGG 59.195 52.381 0.00 0.00 0.00 4.02
2987 3333 1.804748 GGAAAAGGTGGTGCTTCTACG 59.195 52.381 0.00 0.00 0.00 3.51
2988 3334 2.160205 GGGAAAAGGTGGTGCTTCTAC 58.840 52.381 0.00 0.00 0.00 2.59
2989 3335 1.777878 TGGGAAAAGGTGGTGCTTCTA 59.222 47.619 0.00 0.00 0.00 2.10
2990 3336 0.555769 TGGGAAAAGGTGGTGCTTCT 59.444 50.000 0.00 0.00 0.00 2.85
2991 3337 0.673985 GTGGGAAAAGGTGGTGCTTC 59.326 55.000 0.00 0.00 0.00 3.86
2992 3338 0.032615 TGTGGGAAAAGGTGGTGCTT 60.033 50.000 0.00 0.00 0.00 3.91
2993 3339 0.188342 ATGTGGGAAAAGGTGGTGCT 59.812 50.000 0.00 0.00 0.00 4.40
2994 3340 0.603065 GATGTGGGAAAAGGTGGTGC 59.397 55.000 0.00 0.00 0.00 5.01
2995 3341 1.993956 TGATGTGGGAAAAGGTGGTG 58.006 50.000 0.00 0.00 0.00 4.17
2996 3342 2.765689 TTGATGTGGGAAAAGGTGGT 57.234 45.000 0.00 0.00 0.00 4.16
2997 3343 3.577848 TCATTTGATGTGGGAAAAGGTGG 59.422 43.478 0.00 0.00 0.00 4.61
2998 3344 4.870123 TCATTTGATGTGGGAAAAGGTG 57.130 40.909 0.00 0.00 0.00 4.00
2999 3345 5.147032 TCTTCATTTGATGTGGGAAAAGGT 58.853 37.500 0.00 0.00 0.00 3.50
3000 3346 5.477984 TCTCTTCATTTGATGTGGGAAAAGG 59.522 40.000 0.00 0.00 0.00 3.11
3001 3347 6.385033 GTCTCTTCATTTGATGTGGGAAAAG 58.615 40.000 0.00 0.00 0.00 2.27
3002 3348 5.048782 CGTCTCTTCATTTGATGTGGGAAAA 60.049 40.000 0.00 0.00 0.00 2.29
3003 3349 4.455533 CGTCTCTTCATTTGATGTGGGAAA 59.544 41.667 0.00 0.00 0.00 3.13
3004 3350 4.002982 CGTCTCTTCATTTGATGTGGGAA 58.997 43.478 0.00 0.00 0.00 3.97
3005 3351 3.599343 CGTCTCTTCATTTGATGTGGGA 58.401 45.455 0.00 0.00 0.00 4.37
3006 3352 2.096496 GCGTCTCTTCATTTGATGTGGG 59.904 50.000 0.00 0.00 0.00 4.61
3007 3353 3.005554 AGCGTCTCTTCATTTGATGTGG 58.994 45.455 0.00 0.00 0.00 4.17
3008 3354 4.269603 CCTAGCGTCTCTTCATTTGATGTG 59.730 45.833 0.00 0.00 0.00 3.21
3041 3387 1.685224 GGGAGAAGGTGGTGCATCA 59.315 57.895 0.00 0.00 0.00 3.07
3135 3481 1.008538 GTGGTGCTTCAACGGCTTG 60.009 57.895 0.00 0.00 0.00 4.01
3137 3483 2.594592 GGTGGTGCTTCAACGGCT 60.595 61.111 0.00 0.00 0.00 5.52
3143 3489 1.059584 TGGGAGAAGGTGGTGCTTCA 61.060 55.000 0.00 0.00 32.44 3.02
3187 3533 0.108804 TCTCTTGGAATCCACGACGC 60.109 55.000 0.00 0.00 30.78 5.19
3194 3540 6.327887 AGGAGTAATTACCTCTCTTGGAATCC 59.672 42.308 12.05 7.79 0.00 3.01
3198 3544 7.458170 AGAAAAGGAGTAATTACCTCTCTTGGA 59.542 37.037 12.05 0.00 35.25 3.53
3199 3545 7.625469 AGAAAAGGAGTAATTACCTCTCTTGG 58.375 38.462 12.05 0.00 35.25 3.61
3200 3546 8.536175 AGAGAAAAGGAGTAATTACCTCTCTTG 58.464 37.037 12.05 0.00 34.15 3.02
3284 3660 6.480320 CGTCTTACATTATGGAAAGGAGGAAG 59.520 42.308 8.86 0.00 0.00 3.46
3285 3661 6.070424 ACGTCTTACATTATGGAAAGGAGGAA 60.070 38.462 6.24 0.00 0.00 3.36
3286 3662 5.424252 ACGTCTTACATTATGGAAAGGAGGA 59.576 40.000 6.24 0.00 0.00 3.71
3287 3663 5.671493 ACGTCTTACATTATGGAAAGGAGG 58.329 41.667 8.86 4.42 0.00 4.30
3288 3664 7.611213 AAACGTCTTACATTATGGAAAGGAG 57.389 36.000 8.86 6.66 0.00 3.69
3289 3665 7.989416 AAAACGTCTTACATTATGGAAAGGA 57.011 32.000 8.86 0.00 0.00 3.36
3316 3692 6.018507 ACGGTTTTTGACATTACTGTAGTGTC 60.019 38.462 26.98 26.98 43.31 3.67
3317 3693 5.818857 ACGGTTTTTGACATTACTGTAGTGT 59.181 36.000 14.76 14.76 35.14 3.55
3318 3694 6.295039 ACGGTTTTTGACATTACTGTAGTG 57.705 37.500 8.57 8.57 35.14 2.74
3319 3695 5.467735 GGACGGTTTTTGACATTACTGTAGT 59.532 40.000 0.00 0.00 35.14 2.73
3320 3696 5.699458 AGGACGGTTTTTGACATTACTGTAG 59.301 40.000 0.00 0.00 35.14 2.74
3321 3697 5.613329 AGGACGGTTTTTGACATTACTGTA 58.387 37.500 0.00 0.00 35.14 2.74
3322 3698 4.457466 AGGACGGTTTTTGACATTACTGT 58.543 39.130 0.00 0.00 38.67 3.55
3323 3699 5.432885 AAGGACGGTTTTTGACATTACTG 57.567 39.130 0.00 0.00 0.00 2.74
3324 3700 7.754851 ATAAAGGACGGTTTTTGACATTACT 57.245 32.000 0.00 0.00 0.00 2.24
3327 3703 8.032451 CCATAATAAAGGACGGTTTTTGACATT 58.968 33.333 0.00 0.00 0.00 2.71
3328 3704 7.363443 CCCATAATAAAGGACGGTTTTTGACAT 60.363 37.037 0.00 0.00 0.00 3.06
3329 3705 6.071840 CCCATAATAAAGGACGGTTTTTGACA 60.072 38.462 0.00 0.00 0.00 3.58
3330 3706 6.151480 TCCCATAATAAAGGACGGTTTTTGAC 59.849 38.462 0.00 0.00 0.00 3.18
3331 3707 6.151480 GTCCCATAATAAAGGACGGTTTTTGA 59.849 38.462 0.00 0.00 40.65 2.69
3332 3708 6.327154 GTCCCATAATAAAGGACGGTTTTTG 58.673 40.000 0.00 0.00 40.65 2.44
3333 3709 6.519679 GTCCCATAATAAAGGACGGTTTTT 57.480 37.500 0.00 0.00 40.65 1.94
3341 3717 4.903149 TCCCTCTGTCCCATAATAAAGGA 58.097 43.478 0.00 0.00 0.00 3.36
3342 3718 4.660771 ACTCCCTCTGTCCCATAATAAAGG 59.339 45.833 0.00 0.00 0.00 3.11
3343 3719 5.896073 ACTCCCTCTGTCCCATAATAAAG 57.104 43.478 0.00 0.00 0.00 1.85
3344 3720 5.307196 GCTACTCCCTCTGTCCCATAATAAA 59.693 44.000 0.00 0.00 0.00 1.40
3345 3721 4.838986 GCTACTCCCTCTGTCCCATAATAA 59.161 45.833 0.00 0.00 0.00 1.40
3346 3722 4.140782 TGCTACTCCCTCTGTCCCATAATA 60.141 45.833 0.00 0.00 0.00 0.98
3347 3723 3.243724 GCTACTCCCTCTGTCCCATAAT 58.756 50.000 0.00 0.00 0.00 1.28
3348 3724 2.023404 TGCTACTCCCTCTGTCCCATAA 60.023 50.000 0.00 0.00 0.00 1.90
3349 3725 1.573857 TGCTACTCCCTCTGTCCCATA 59.426 52.381 0.00 0.00 0.00 2.74
3350 3726 0.339859 TGCTACTCCCTCTGTCCCAT 59.660 55.000 0.00 0.00 0.00 4.00
3351 3727 0.116342 TTGCTACTCCCTCTGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
3352 3728 1.066071 GTTTGCTACTCCCTCTGTCCC 60.066 57.143 0.00 0.00 0.00 4.46
3353 3729 1.623811 TGTTTGCTACTCCCTCTGTCC 59.376 52.381 0.00 0.00 0.00 4.02
3354 3730 3.402628 TTGTTTGCTACTCCCTCTGTC 57.597 47.619 0.00 0.00 0.00 3.51
3355 3731 3.136626 AGTTTGTTTGCTACTCCCTCTGT 59.863 43.478 0.00 0.00 0.00 3.41
3356 3732 3.744660 AGTTTGTTTGCTACTCCCTCTG 58.255 45.455 0.00 0.00 0.00 3.35
3357 3733 5.562298 TTAGTTTGTTTGCTACTCCCTCT 57.438 39.130 0.00 0.00 0.00 3.69
3358 3734 5.392057 GCATTAGTTTGTTTGCTACTCCCTC 60.392 44.000 0.00 0.00 32.41 4.30
3359 3735 4.459337 GCATTAGTTTGTTTGCTACTCCCT 59.541 41.667 0.00 0.00 32.41 4.20
3360 3736 4.459337 AGCATTAGTTTGTTTGCTACTCCC 59.541 41.667 0.00 0.00 43.28 4.30
3361 3737 5.629079 AGCATTAGTTTGTTTGCTACTCC 57.371 39.130 0.00 0.00 43.28 3.85
3365 3741 5.646360 GGGAGTAGCATTAGTTTGTTTGCTA 59.354 40.000 0.00 0.00 43.28 3.49
3366 3742 4.459337 GGGAGTAGCATTAGTTTGTTTGCT 59.541 41.667 1.61 1.61 46.51 3.91
3393 3769 8.588290 ATGTATTAAGCCTTGTGTATTTGGAA 57.412 30.769 0.00 0.00 0.00 3.53
3411 3787 9.467258 CTCGAAGGATACCGTAAAAATGTATTA 57.533 33.333 0.00 0.00 37.17 0.98
3417 3793 4.124970 GCCTCGAAGGATACCGTAAAAAT 58.875 43.478 5.24 0.00 37.67 1.82
3424 3800 1.136305 TCAAAGCCTCGAAGGATACCG 59.864 52.381 5.24 0.00 37.67 4.02
3428 3804 0.984230 TGGTCAAAGCCTCGAAGGAT 59.016 50.000 5.24 0.00 37.67 3.24
3429 3805 0.984230 ATGGTCAAAGCCTCGAAGGA 59.016 50.000 5.24 0.00 37.67 3.36
3434 3810 1.247567 AACCAATGGTCAAAGCCTCG 58.752 50.000 4.95 0.00 33.12 4.63
3538 3921 8.408043 ACTTCTTCCACATATGAATTTGTTGA 57.592 30.769 10.38 0.00 0.00 3.18
3636 4032 9.830975 AACATAAAAAGGCTAACACATTTTTCT 57.169 25.926 3.29 0.00 36.53 2.52
3651 4047 3.574614 CGCCTGTCCAAACATAAAAAGG 58.425 45.455 0.00 0.00 34.13 3.11
3653 4049 3.223435 TCCGCCTGTCCAAACATAAAAA 58.777 40.909 0.00 0.00 34.13 1.94
3660 4056 1.154197 GTTACTCCGCCTGTCCAAAC 58.846 55.000 0.00 0.00 0.00 2.93
3665 4061 0.032952 TGTGTGTTACTCCGCCTGTC 59.967 55.000 0.00 0.00 0.00 3.51
3670 4066 0.039256 TACCGTGTGTGTTACTCCGC 60.039 55.000 0.00 0.00 0.00 5.54
3671 4067 2.642139 ATACCGTGTGTGTTACTCCG 57.358 50.000 0.00 0.00 0.00 4.63
3681 4077 5.801947 GGTACTGTACAACTAATACCGTGTG 59.198 44.000 18.79 0.00 0.00 3.82
3728 4313 6.723977 AGGTGGCTGACTTTTATTTTATTCCA 59.276 34.615 0.00 0.00 0.00 3.53
3740 4325 2.158475 TGAAATCCAGGTGGCTGACTTT 60.158 45.455 0.00 0.00 34.44 2.66
3752 4337 6.579666 TCAAATTGAAGTCCTGAAATCCAG 57.420 37.500 0.00 0.00 42.55 3.86
3812 4399 7.898918 AGTTCATTGGATGATTGAATGTTGAA 58.101 30.769 0.00 0.00 39.39 2.69
3814 4401 8.440059 CAAAGTTCATTGGATGATTGAATGTTG 58.560 33.333 0.00 0.00 39.39 3.33
3817 4404 9.642327 TTACAAAGTTCATTGGATGATTGAATG 57.358 29.630 8.79 0.00 39.39 2.67
3850 4439 9.943163 AAAACATGTAAAATATGCCAAAACAAC 57.057 25.926 0.00 0.00 0.00 3.32
3853 4442 8.491950 ACGAAAACATGTAAAATATGCCAAAAC 58.508 29.630 0.00 0.00 0.00 2.43
3889 4478 2.014128 CGCATGGGAATTTAGGTCGTT 58.986 47.619 3.11 0.00 0.00 3.85
3909 4498 7.254692 GCTCTTTACGGGTGGAATATAAGTTTC 60.255 40.741 0.00 0.00 0.00 2.78
3946 4535 3.603158 TTCATTTACGAGCAGCACCTA 57.397 42.857 0.00 0.00 0.00 3.08
3948 4537 3.764885 ATTTCATTTACGAGCAGCACC 57.235 42.857 0.00 0.00 0.00 5.01
3983 4573 7.947890 TCTTTGGTCACTATTGGGTAATTTTCT 59.052 33.333 0.00 0.00 0.00 2.52
3991 4581 5.454966 AGTTTTCTTTGGTCACTATTGGGT 58.545 37.500 0.00 0.00 0.00 4.51
4030 4621 8.460428 ACAAGAGTTAGTGATTAGTACACTAGC 58.540 37.037 11.79 11.79 46.62 3.42
5337 5936 0.871057 GAGCCTCACAAGTTCTGCAC 59.129 55.000 0.00 0.00 0.00 4.57
5341 5940 3.556004 GCTAACTGAGCCTCACAAGTTCT 60.556 47.826 1.53 0.00 46.41 3.01
5354 5953 4.745125 TGACTTTCGAACAAGCTAACTGAG 59.255 41.667 0.00 0.00 0.00 3.35
5421 6020 1.534717 TCCCCCGTTCTCCTCGTTT 60.535 57.895 0.00 0.00 0.00 3.60
5422 6021 1.982938 CTCCCCCGTTCTCCTCGTT 60.983 63.158 0.00 0.00 0.00 3.85
5452 6069 6.991531 ACTTTGTACGTACCTGGTTTTATCAA 59.008 34.615 22.43 3.22 0.00 2.57
5481 6101 0.740149 CCCAGCGCTTGAATATGCAA 59.260 50.000 7.50 0.00 0.00 4.08
5525 6145 0.177604 CTCCTTGCTAGCCAGAGTGG 59.822 60.000 17.10 7.71 41.55 4.00
5562 6182 6.598753 TTTGCTACCAAACTCTATTATCGC 57.401 37.500 0.00 0.00 36.09 4.58
5622 6242 9.467258 GCATCATGCACACAATATTTATTAGTT 57.533 29.630 4.20 0.00 44.26 2.24
5658 11043 1.000938 CTTGACTTGCTTCTTGGTGCC 60.001 52.381 0.00 0.00 0.00 5.01
5707 11092 3.512516 GCCTTCCATGGCGCAGAC 61.513 66.667 10.83 0.00 43.74 3.51
5747 11132 4.651008 CCACGTACACGGTGGCGT 62.651 66.667 21.20 21.20 44.95 5.68
5804 11189 3.329225 TGTGTAAGGGTGGATCATCAACA 59.671 43.478 0.00 0.00 0.00 3.33
5820 11205 0.882927 GCTCCCACTTGCGTGTGTAA 60.883 55.000 7.87 0.00 39.55 2.41
6342 11727 2.600769 AACTCCCTCGACCTGCGT 60.601 61.111 0.00 0.00 41.80 5.24
6873 12258 1.066587 GTCGCTTGATCCGGGAGAG 59.933 63.158 0.00 1.75 0.00 3.20
6893 12278 1.874019 CCTCTGTTCGCATCGACGG 60.874 63.158 0.00 0.00 34.89 4.79
6921 12306 0.600255 CCGTTCTGCAGAGAAACGGT 60.600 55.000 34.81 0.00 42.17 4.83
6948 12333 6.688813 CAGACTTGACTTTTGAACAAGCTAAC 59.311 38.462 0.00 0.00 42.93 2.34
7039 12441 7.792032 ACCTGATTTTATCGAAGAACCATCTA 58.208 34.615 0.00 0.00 43.58 1.98
7069 12471 5.848036 CGCTTGAATATGCACTATACTTTGC 59.152 40.000 0.00 0.00 39.33 3.68
7093 12495 9.716507 ACAAAATTACGAATGTGAATACATAGC 57.283 29.630 0.00 0.00 46.54 2.97
7103 12505 5.218885 TGCCTCAACAAAATTACGAATGTG 58.781 37.500 0.00 0.00 0.00 3.21
7104 12506 5.446143 TGCCTCAACAAAATTACGAATGT 57.554 34.783 0.00 0.00 0.00 2.71
7110 12512 4.855531 ACTCGTTGCCTCAACAAAATTAC 58.144 39.130 9.90 0.00 43.70 1.89
7230 12637 1.772836 AATTCCAAGCTCCCTGATGC 58.227 50.000 0.00 0.00 0.00 3.91
7357 12765 8.458573 TTTTGCGGGTGATCTATATATTTGTT 57.541 30.769 0.00 0.00 0.00 2.83
7573 12982 2.303163 AGGGTGCCGTTTTTCAAAAC 57.697 45.000 5.25 5.25 43.61 2.43
7627 13037 1.758936 TCATCATTGGCAGCTCCTTG 58.241 50.000 0.00 2.91 35.26 3.61
7680 13090 6.197364 TCGCTTTAGGTTTTCTTTTGTCAA 57.803 33.333 0.00 0.00 0.00 3.18
7757 13167 4.813161 ACATCTGTATCAGCACACAATAGC 59.187 41.667 0.00 0.00 0.00 2.97
7901 13315 2.492088 CTCAGGTCGGTAACTGTCATCA 59.508 50.000 0.00 0.00 36.17 3.07
8363 13777 0.108756 GGAGAAAGTCCCGGAAGTCG 60.109 60.000 0.73 0.00 39.88 4.18
8505 13919 3.414700 CTCCGTGGCAGTTGCGAC 61.415 66.667 8.92 8.92 44.67 5.19
8690 14104 2.125106 GACGCCCACCTCATGTCC 60.125 66.667 0.00 0.00 0.00 4.02
9559 15033 9.412390 CGAATTTGCTGCAATGTAATTTTAATC 57.588 29.630 16.77 0.00 31.22 1.75
9560 15034 9.149225 TCGAATTTGCTGCAATGTAATTTTAAT 57.851 25.926 16.77 0.00 31.22 1.40
9561 15035 8.526218 TCGAATTTGCTGCAATGTAATTTTAA 57.474 26.923 16.77 0.00 31.22 1.52
9562 15036 8.526218 TTCGAATTTGCTGCAATGTAATTTTA 57.474 26.923 16.77 0.00 31.22 1.52
9563 15037 7.418840 TTCGAATTTGCTGCAATGTAATTTT 57.581 28.000 16.77 2.12 31.22 1.82
9564 15038 7.418840 TTTCGAATTTGCTGCAATGTAATTT 57.581 28.000 16.77 3.78 31.22 1.82
9565 15039 7.331440 TCATTTCGAATTTGCTGCAATGTAATT 59.669 29.630 16.77 12.42 36.63 1.40
9566 15040 6.812656 TCATTTCGAATTTGCTGCAATGTAAT 59.187 30.769 16.77 3.57 0.00 1.89
9567 15041 6.155136 TCATTTCGAATTTGCTGCAATGTAA 58.845 32.000 16.77 0.90 0.00 2.41
9568 15042 5.707931 TCATTTCGAATTTGCTGCAATGTA 58.292 33.333 16.77 1.31 0.00 2.29
9569 15043 4.558178 TCATTTCGAATTTGCTGCAATGT 58.442 34.783 16.77 6.97 0.00 2.71
9570 15044 5.276678 GGATCATTTCGAATTTGCTGCAATG 60.277 40.000 16.77 8.82 0.00 2.82
9571 15045 4.807304 GGATCATTTCGAATTTGCTGCAAT 59.193 37.500 16.77 1.41 0.00 3.56
9572 15046 4.082081 AGGATCATTTCGAATTTGCTGCAA 60.082 37.500 11.69 11.69 0.00 4.08
9573 15047 3.444742 AGGATCATTTCGAATTTGCTGCA 59.555 39.130 0.00 0.00 0.00 4.41
9574 15048 4.037858 AGGATCATTTCGAATTTGCTGC 57.962 40.909 0.00 0.00 0.00 5.25
9575 15049 5.210715 GCTAGGATCATTTCGAATTTGCTG 58.789 41.667 0.00 0.00 0.00 4.41
9576 15050 4.276926 GGCTAGGATCATTTCGAATTTGCT 59.723 41.667 0.00 0.00 0.00 3.91
9577 15051 4.036734 TGGCTAGGATCATTTCGAATTTGC 59.963 41.667 0.00 0.00 0.00 3.68
9578 15052 5.066375 TGTGGCTAGGATCATTTCGAATTTG 59.934 40.000 0.00 0.03 0.00 2.32
9579 15053 5.192927 TGTGGCTAGGATCATTTCGAATTT 58.807 37.500 0.00 0.00 0.00 1.82
9580 15054 4.780815 TGTGGCTAGGATCATTTCGAATT 58.219 39.130 0.00 0.00 0.00 2.17
9581 15055 4.422073 TGTGGCTAGGATCATTTCGAAT 57.578 40.909 0.00 0.00 0.00 3.34
9582 15056 3.904800 TGTGGCTAGGATCATTTCGAA 57.095 42.857 0.00 0.00 0.00 3.71
9583 15057 3.904800 TTGTGGCTAGGATCATTTCGA 57.095 42.857 0.00 0.00 0.00 3.71
9584 15058 4.963276 TTTTGTGGCTAGGATCATTTCG 57.037 40.909 0.00 0.00 0.00 3.46
9610 15084 9.927668 ATGAAATCGTGGATCACTTTTTATTTT 57.072 25.926 0.00 0.00 31.34 1.82
9611 15085 9.573133 GATGAAATCGTGGATCACTTTTTATTT 57.427 29.630 0.00 0.00 31.13 1.40
9629 15103 5.540911 TGACCCTTTTGCTTTGATGAAATC 58.459 37.500 0.00 0.00 45.83 2.17
9630 15104 5.549742 TGACCCTTTTGCTTTGATGAAAT 57.450 34.783 0.00 0.00 0.00 2.17
9631 15105 5.549742 ATGACCCTTTTGCTTTGATGAAA 57.450 34.783 0.00 0.00 0.00 2.69
9632 15106 5.070180 TCAATGACCCTTTTGCTTTGATGAA 59.930 36.000 0.00 0.00 0.00 2.57
9633 15107 4.588106 TCAATGACCCTTTTGCTTTGATGA 59.412 37.500 0.00 0.00 0.00 2.92
9634 15108 4.885413 TCAATGACCCTTTTGCTTTGATG 58.115 39.130 0.00 0.00 0.00 3.07
9635 15109 5.337813 GGATCAATGACCCTTTTGCTTTGAT 60.338 40.000 0.00 0.00 38.39 2.57
9636 15110 4.021192 GGATCAATGACCCTTTTGCTTTGA 60.021 41.667 0.00 0.00 32.60 2.69
9637 15111 4.020839 AGGATCAATGACCCTTTTGCTTTG 60.021 41.667 0.00 0.00 0.00 2.77
9638 15112 4.162651 AGGATCAATGACCCTTTTGCTTT 58.837 39.130 0.00 0.00 0.00 3.51
9639 15113 3.766051 GAGGATCAATGACCCTTTTGCTT 59.234 43.478 0.00 0.00 33.17 3.91
9640 15114 3.011032 AGAGGATCAATGACCCTTTTGCT 59.989 43.478 0.00 0.00 37.82 3.91
9641 15115 3.359950 AGAGGATCAATGACCCTTTTGC 58.640 45.455 0.00 0.00 37.82 3.68
9642 15116 8.790718 CATATAAGAGGATCAATGACCCTTTTG 58.209 37.037 9.53 0.00 37.82 2.44
9643 15117 8.506083 ACATATAAGAGGATCAATGACCCTTTT 58.494 33.333 4.71 4.71 37.82 2.27
9644 15118 8.050316 ACATATAAGAGGATCAATGACCCTTT 57.950 34.615 0.00 0.00 37.82 3.11
9645 15119 7.639062 ACATATAAGAGGATCAATGACCCTT 57.361 36.000 0.00 4.71 37.82 3.95
9646 15120 8.742125 TTACATATAAGAGGATCAATGACCCT 57.258 34.615 0.00 0.00 37.82 4.34
9647 15121 9.793259 TTTTACATATAAGAGGATCAATGACCC 57.207 33.333 0.00 0.00 37.82 4.46
9670 15144 9.753674 TGGAGGAGTAGAAATGATATTTGTTTT 57.246 29.630 0.00 0.00 0.00 2.43
9671 15145 9.753674 TTGGAGGAGTAGAAATGATATTTGTTT 57.246 29.630 0.00 0.00 0.00 2.83
9672 15146 9.753674 TTTGGAGGAGTAGAAATGATATTTGTT 57.246 29.630 0.00 0.00 0.00 2.83
9673 15147 9.927081 ATTTGGAGGAGTAGAAATGATATTTGT 57.073 29.630 0.00 0.00 0.00 2.83
9679 15153 8.772250 TGAACTATTTGGAGGAGTAGAAATGAT 58.228 33.333 0.00 0.00 0.00 2.45
9680 15154 8.146053 TGAACTATTTGGAGGAGTAGAAATGA 57.854 34.615 0.00 0.00 0.00 2.57
9681 15155 8.260818 TCTGAACTATTTGGAGGAGTAGAAATG 58.739 37.037 0.00 0.00 0.00 2.32
9682 15156 8.380742 TCTGAACTATTTGGAGGAGTAGAAAT 57.619 34.615 0.00 0.00 0.00 2.17
9683 15157 7.792364 TCTGAACTATTTGGAGGAGTAGAAA 57.208 36.000 0.00 0.00 0.00 2.52
9684 15158 7.234782 TGTTCTGAACTATTTGGAGGAGTAGAA 59.765 37.037 20.18 0.00 0.00 2.10
9685 15159 6.724441 TGTTCTGAACTATTTGGAGGAGTAGA 59.276 38.462 20.18 0.00 0.00 2.59
9686 15160 6.814146 GTGTTCTGAACTATTTGGAGGAGTAG 59.186 42.308 20.18 0.00 0.00 2.57
9687 15161 6.571731 CGTGTTCTGAACTATTTGGAGGAGTA 60.572 42.308 20.18 0.00 0.00 2.59
9688 15162 5.552178 GTGTTCTGAACTATTTGGAGGAGT 58.448 41.667 20.18 0.00 0.00 3.85
9689 15163 4.627467 CGTGTTCTGAACTATTTGGAGGAG 59.373 45.833 20.18 0.00 0.00 3.69
9690 15164 4.282449 TCGTGTTCTGAACTATTTGGAGGA 59.718 41.667 20.18 7.41 0.00 3.71
9691 15165 4.389077 GTCGTGTTCTGAACTATTTGGAGG 59.611 45.833 20.18 5.36 0.00 4.30
9692 15166 4.988540 TGTCGTGTTCTGAACTATTTGGAG 59.011 41.667 20.18 4.55 0.00 3.86
9693 15167 4.951254 TGTCGTGTTCTGAACTATTTGGA 58.049 39.130 20.18 6.82 0.00 3.53
9694 15168 4.377431 GCTGTCGTGTTCTGAACTATTTGG 60.377 45.833 20.18 8.76 0.00 3.28
9695 15169 4.211164 TGCTGTCGTGTTCTGAACTATTTG 59.789 41.667 20.18 8.35 0.00 2.32
9696 15170 4.377021 TGCTGTCGTGTTCTGAACTATTT 58.623 39.130 20.18 0.00 0.00 1.40
9697 15171 3.990092 TGCTGTCGTGTTCTGAACTATT 58.010 40.909 20.18 0.00 0.00 1.73
9698 15172 3.660501 TGCTGTCGTGTTCTGAACTAT 57.339 42.857 20.18 0.00 0.00 2.12
9699 15173 3.446310 TTGCTGTCGTGTTCTGAACTA 57.554 42.857 20.18 5.50 0.00 2.24
9700 15174 2.309528 TTGCTGTCGTGTTCTGAACT 57.690 45.000 20.18 0.00 0.00 3.01
9701 15175 3.545633 GAATTGCTGTCGTGTTCTGAAC 58.454 45.455 13.49 13.49 0.00 3.18
9702 15176 2.548057 GGAATTGCTGTCGTGTTCTGAA 59.452 45.455 0.00 0.00 0.00 3.02
9703 15177 2.143122 GGAATTGCTGTCGTGTTCTGA 58.857 47.619 0.00 0.00 0.00 3.27
9704 15178 1.136252 CGGAATTGCTGTCGTGTTCTG 60.136 52.381 0.00 0.00 0.00 3.02
9705 15179 1.148310 CGGAATTGCTGTCGTGTTCT 58.852 50.000 0.00 0.00 0.00 3.01
9706 15180 1.136336 GTCGGAATTGCTGTCGTGTTC 60.136 52.381 0.00 0.00 0.00 3.18
9707 15181 0.865769 GTCGGAATTGCTGTCGTGTT 59.134 50.000 0.00 0.00 0.00 3.32
9708 15182 0.249699 TGTCGGAATTGCTGTCGTGT 60.250 50.000 0.00 0.00 0.00 4.49
9709 15183 0.439985 CTGTCGGAATTGCTGTCGTG 59.560 55.000 0.00 0.00 0.00 4.35
9710 15184 0.317160 TCTGTCGGAATTGCTGTCGT 59.683 50.000 0.00 0.00 0.00 4.34
9711 15185 0.994995 CTCTGTCGGAATTGCTGTCG 59.005 55.000 0.00 0.00 0.00 4.35
9712 15186 1.996191 GACTCTGTCGGAATTGCTGTC 59.004 52.381 0.00 0.00 0.00 3.51
9713 15187 1.344438 TGACTCTGTCGGAATTGCTGT 59.656 47.619 0.00 0.00 34.95 4.40
9714 15188 2.084610 TGACTCTGTCGGAATTGCTG 57.915 50.000 0.00 0.00 34.95 4.41
9715 15189 2.839486 TTGACTCTGTCGGAATTGCT 57.161 45.000 0.00 0.00 34.95 3.91
9716 15190 3.067106 TCTTTGACTCTGTCGGAATTGC 58.933 45.455 0.00 0.00 34.95 3.56
9717 15191 3.433615 GGTCTTTGACTCTGTCGGAATTG 59.566 47.826 0.00 0.00 34.95 2.32
9718 15192 3.071023 TGGTCTTTGACTCTGTCGGAATT 59.929 43.478 0.00 0.00 34.95 2.17
9719 15193 2.632996 TGGTCTTTGACTCTGTCGGAAT 59.367 45.455 0.00 0.00 34.95 3.01
9720 15194 2.036387 TGGTCTTTGACTCTGTCGGAA 58.964 47.619 0.00 0.00 34.95 4.30
9721 15195 1.699730 TGGTCTTTGACTCTGTCGGA 58.300 50.000 0.00 0.00 34.95 4.55
9722 15196 2.526304 TTGGTCTTTGACTCTGTCGG 57.474 50.000 0.00 0.00 34.95 4.79
9723 15197 3.717707 TCTTTGGTCTTTGACTCTGTCG 58.282 45.455 0.00 0.00 34.95 4.35
9724 15198 6.625873 AAATCTTTGGTCTTTGACTCTGTC 57.374 37.500 0.00 0.00 32.47 3.51
9725 15199 7.509546 TCTAAATCTTTGGTCTTTGACTCTGT 58.490 34.615 0.00 0.00 32.47 3.41
9726 15200 7.969536 TCTAAATCTTTGGTCTTTGACTCTG 57.030 36.000 0.00 0.00 32.47 3.35
9727 15201 9.579932 AATTCTAAATCTTTGGTCTTTGACTCT 57.420 29.630 0.00 0.00 32.47 3.24
9747 15221 9.561069 GGCTCAGGATTTTTCTACATAATTCTA 57.439 33.333 0.00 0.00 0.00 2.10
9748 15222 8.055181 TGGCTCAGGATTTTTCTACATAATTCT 58.945 33.333 0.00 0.00 0.00 2.40
9749 15223 8.225603 TGGCTCAGGATTTTTCTACATAATTC 57.774 34.615 0.00 0.00 0.00 2.17
9750 15224 8.055181 TCTGGCTCAGGATTTTTCTACATAATT 58.945 33.333 2.86 0.00 31.51 1.40
9751 15225 7.577303 TCTGGCTCAGGATTTTTCTACATAAT 58.423 34.615 2.86 0.00 31.51 1.28
9752 15226 6.957631 TCTGGCTCAGGATTTTTCTACATAA 58.042 36.000 2.86 0.00 31.51 1.90
9753 15227 6.560003 TCTGGCTCAGGATTTTTCTACATA 57.440 37.500 2.86 0.00 31.51 2.29
9754 15228 5.441718 TCTGGCTCAGGATTTTTCTACAT 57.558 39.130 2.86 0.00 31.51 2.29
9755 15229 4.908601 TCTGGCTCAGGATTTTTCTACA 57.091 40.909 2.86 0.00 31.51 2.74
9756 15230 4.819088 GGATCTGGCTCAGGATTTTTCTAC 59.181 45.833 0.00 0.00 31.51 2.59
9757 15231 4.141390 GGGATCTGGCTCAGGATTTTTCTA 60.141 45.833 0.00 0.00 31.51 2.10
9758 15232 3.372458 GGGATCTGGCTCAGGATTTTTCT 60.372 47.826 0.00 0.00 31.51 2.52
9759 15233 2.954989 GGGATCTGGCTCAGGATTTTTC 59.045 50.000 0.00 0.00 31.51 2.29
9760 15234 2.312741 TGGGATCTGGCTCAGGATTTTT 59.687 45.455 0.00 0.00 31.51 1.94
9761 15235 1.925255 TGGGATCTGGCTCAGGATTTT 59.075 47.619 0.00 0.00 31.51 1.82
9762 15236 1.600058 TGGGATCTGGCTCAGGATTT 58.400 50.000 0.00 0.00 31.51 2.17
9763 15237 1.600058 TTGGGATCTGGCTCAGGATT 58.400 50.000 0.00 0.00 31.51 3.01
9764 15238 1.600058 TTTGGGATCTGGCTCAGGAT 58.400 50.000 0.00 0.00 31.51 3.24
9765 15239 1.371467 TTTTGGGATCTGGCTCAGGA 58.629 50.000 0.00 0.00 31.51 3.86
9766 15240 2.449137 ATTTTGGGATCTGGCTCAGG 57.551 50.000 0.00 0.00 31.51 3.86
9767 15241 4.891756 ACAATATTTTGGGATCTGGCTCAG 59.108 41.667 0.89 0.00 37.15 3.35
9768 15242 4.870636 ACAATATTTTGGGATCTGGCTCA 58.129 39.130 0.89 0.00 37.15 4.26
9769 15243 5.859205 AACAATATTTTGGGATCTGGCTC 57.141 39.130 0.89 0.00 37.15 4.70
9770 15244 6.625532 AAAACAATATTTTGGGATCTGGCT 57.374 33.333 0.89 0.00 37.15 4.75
9771 15245 6.986231 CCTAAAACAATATTTTGGGATCTGGC 59.014 38.462 8.40 0.00 40.97 4.85
9779 15253 7.547722 GCCTGTTACCCTAAAACAATATTTTGG 59.452 37.037 0.89 0.00 36.46 3.28
9780 15254 8.091449 TGCCTGTTACCCTAAAACAATATTTTG 58.909 33.333 0.00 0.00 36.46 2.44
9781 15255 8.092068 GTGCCTGTTACCCTAAAACAATATTTT 58.908 33.333 0.00 0.00 36.46 1.82
9782 15256 7.310175 GGTGCCTGTTACCCTAAAACAATATTT 60.310 37.037 0.00 0.00 36.46 1.40
9783 15257 6.153851 GGTGCCTGTTACCCTAAAACAATATT 59.846 38.462 0.00 0.00 36.46 1.28
9784 15258 5.655090 GGTGCCTGTTACCCTAAAACAATAT 59.345 40.000 0.00 0.00 36.46 1.28
9785 15259 5.011586 GGTGCCTGTTACCCTAAAACAATA 58.988 41.667 0.00 0.00 36.46 1.90
9786 15260 3.830178 GGTGCCTGTTACCCTAAAACAAT 59.170 43.478 0.00 0.00 36.46 2.71
9787 15261 3.224269 GGTGCCTGTTACCCTAAAACAA 58.776 45.455 0.00 0.00 36.46 2.83
9788 15262 2.811136 CGGTGCCTGTTACCCTAAAACA 60.811 50.000 0.00 0.00 34.66 2.83
9789 15263 1.808343 CGGTGCCTGTTACCCTAAAAC 59.192 52.381 0.00 0.00 34.66 2.43
9790 15264 1.420891 ACGGTGCCTGTTACCCTAAAA 59.579 47.619 0.00 0.00 34.66 1.52
9791 15265 1.058284 ACGGTGCCTGTTACCCTAAA 58.942 50.000 0.00 0.00 34.66 1.85
9792 15266 1.002315 GAACGGTGCCTGTTACCCTAA 59.998 52.381 0.10 0.00 34.66 2.69
9793 15267 0.609662 GAACGGTGCCTGTTACCCTA 59.390 55.000 0.10 0.00 34.66 3.53
9794 15268 1.125711 AGAACGGTGCCTGTTACCCT 61.126 55.000 0.10 0.00 34.66 4.34
9795 15269 0.250597 AAGAACGGTGCCTGTTACCC 60.251 55.000 0.10 0.00 34.66 3.69
9796 15270 2.028748 TCTAAGAACGGTGCCTGTTACC 60.029 50.000 0.10 0.00 34.81 2.85
9797 15271 3.308438 TCTAAGAACGGTGCCTGTTAC 57.692 47.619 0.10 0.00 0.00 2.50
9798 15272 4.546829 AATCTAAGAACGGTGCCTGTTA 57.453 40.909 0.10 0.00 0.00 2.41
9799 15273 3.418684 AATCTAAGAACGGTGCCTGTT 57.581 42.857 0.00 0.00 0.00 3.16
9800 15274 4.546829 TTAATCTAAGAACGGTGCCTGT 57.453 40.909 0.00 0.00 0.00 4.00
9801 15275 5.673818 GCTTTTAATCTAAGAACGGTGCCTG 60.674 44.000 0.00 0.00 0.00 4.85
9802 15276 4.395231 GCTTTTAATCTAAGAACGGTGCCT 59.605 41.667 0.00 0.00 0.00 4.75
9803 15277 4.155280 TGCTTTTAATCTAAGAACGGTGCC 59.845 41.667 0.00 0.00 0.00 5.01
9804 15278 5.086727 GTGCTTTTAATCTAAGAACGGTGC 58.913 41.667 0.00 0.00 0.00 5.01
9805 15279 6.236017 TGTGCTTTTAATCTAAGAACGGTG 57.764 37.500 0.00 0.00 34.45 4.94
9806 15280 7.305474 CAATGTGCTTTTAATCTAAGAACGGT 58.695 34.615 0.00 0.00 34.45 4.83
9807 15281 6.251376 GCAATGTGCTTTTAATCTAAGAACGG 59.749 38.462 0.00 0.00 40.96 4.44
9808 15282 6.801377 TGCAATGTGCTTTTAATCTAAGAACG 59.199 34.615 1.43 0.00 45.31 3.95
9894 15370 5.980715 GTCTTTTTGTCGGCTAATTTGGAAA 59.019 36.000 0.00 0.00 0.00 3.13
9914 15390 3.000819 TGGGCCGACGGATGTCTT 61.001 61.111 20.50 0.00 43.21 3.01
9915 15391 3.771160 GTGGGCCGACGGATGTCT 61.771 66.667 20.50 0.00 43.21 3.41
9934 15410 4.059459 CTCACGTGCGACCGTTGC 62.059 66.667 11.67 3.55 39.45 4.17
9935 15411 3.403057 CCTCACGTGCGACCGTTG 61.403 66.667 11.67 0.00 39.45 4.10
9936 15412 4.657824 CCCTCACGTGCGACCGTT 62.658 66.667 11.67 0.00 39.45 4.44
9938 15414 4.351938 TTCCCTCACGTGCGACCG 62.352 66.667 11.67 0.00 0.00 4.79
9939 15415 2.430382 TTCTTCCCTCACGTGCGACC 62.430 60.000 11.67 0.00 0.00 4.79
9940 15416 0.599204 TTTCTTCCCTCACGTGCGAC 60.599 55.000 11.67 0.00 0.00 5.19
9941 15417 0.320374 ATTTCTTCCCTCACGTGCGA 59.680 50.000 11.67 3.03 0.00 5.10
9942 15418 2.840974 ATTTCTTCCCTCACGTGCG 58.159 52.632 11.67 4.14 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.