Multiple sequence alignment - TraesCS4D01G319200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G319200 chr4D 100.000 4056 0 0 1 4056 483104544 483108599 0.000000e+00 7491.0
1 TraesCS4D01G319200 chr5A 88.129 2780 193 57 1324 4056 663282588 663285277 0.000000e+00 3179.0
2 TraesCS4D01G319200 chr5A 88.692 734 39 22 628 1330 663281484 663282204 0.000000e+00 856.0
3 TraesCS4D01G319200 chr4B 90.828 2006 145 22 1617 3599 613316623 613318612 0.000000e+00 2649.0
4 TraesCS4D01G319200 chr4B 90.517 928 43 16 648 1543 613315672 613316586 0.000000e+00 1184.0
5 TraesCS4D01G319200 chr4B 87.789 303 19 10 3756 4056 613318675 613318961 5.020000e-89 339.0
6 TraesCS4D01G319200 chr5B 85.185 243 26 4 1107 1341 34430545 34430305 1.460000e-59 241.0
7 TraesCS4D01G319200 chr5B 86.842 76 10 0 899 974 34430968 34430893 7.220000e-13 86.1
8 TraesCS4D01G319200 chr2B 85.408 233 26 3 1107 1332 747393757 747393988 6.780000e-58 235.0
9 TraesCS4D01G319200 chr2B 89.474 76 8 0 899 974 747392907 747392982 3.340000e-16 97.1
10 TraesCS4D01G319200 chr6B 92.000 75 6 0 900 974 355858761 355858687 5.540000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G319200 chr4D 483104544 483108599 4055 False 7491.000000 7491 100.000000 1 4056 1 chr4D.!!$F1 4055
1 TraesCS4D01G319200 chr5A 663281484 663285277 3793 False 2017.500000 3179 88.410500 628 4056 2 chr5A.!!$F1 3428
2 TraesCS4D01G319200 chr4B 613315672 613318961 3289 False 1390.666667 2649 89.711333 648 4056 3 chr4B.!!$F1 3408

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
210 211 0.034337 TTACCCGAGTCAGCCAACAC 59.966 55.0 0.00 0.0 0.00 3.32 F
277 278 0.035458 AAAAGCCTCACCTCTCACCG 59.965 55.0 0.00 0.0 0.00 4.94 F
1539 1981 0.102300 CACGTCACCACTCACACTGA 59.898 55.0 0.00 0.0 0.00 3.41 F
1960 2407 0.320508 ACTCGGGAGAAGCCGAAAAC 60.321 55.0 2.08 0.0 39.18 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2132 2582 0.893727 GCAACACCGTTGGAAGGGAT 60.894 55.0 8.79 0.0 37.39 3.85 R
2145 2595 1.160137 CAGGAAGCTACCAGCAACAC 58.840 55.0 0.38 0.0 45.56 3.32 R
2593 3049 0.395311 ATGCTGCCAGGAAGTCCATG 60.395 55.0 0.00 0.0 38.89 3.66 R
3688 4186 0.250901 AACCAGACATGCCCTGTGTC 60.251 55.0 12.83 0.0 44.85 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.533253 TTAGTAAGCGTAAAGTGAATAATACCC 57.467 33.333 0.00 0.00 0.00 3.69
47 48 6.988580 AGTAAGCGTAAAGTGAATAATACCCC 59.011 38.462 0.00 0.00 0.00 4.95
48 49 5.625568 AGCGTAAAGTGAATAATACCCCT 57.374 39.130 0.00 0.00 0.00 4.79
49 50 5.365619 AGCGTAAAGTGAATAATACCCCTG 58.634 41.667 0.00 0.00 0.00 4.45
50 51 5.129815 AGCGTAAAGTGAATAATACCCCTGA 59.870 40.000 0.00 0.00 0.00 3.86
51 52 5.818857 GCGTAAAGTGAATAATACCCCTGAA 59.181 40.000 0.00 0.00 0.00 3.02
52 53 6.238293 GCGTAAAGTGAATAATACCCCTGAAC 60.238 42.308 0.00 0.00 0.00 3.18
53 54 7.046033 CGTAAAGTGAATAATACCCCTGAACT 58.954 38.462 0.00 0.00 0.00 3.01
54 55 7.551617 CGTAAAGTGAATAATACCCCTGAACTT 59.448 37.037 0.00 0.00 0.00 2.66
55 56 9.895138 GTAAAGTGAATAATACCCCTGAACTTA 57.105 33.333 0.00 0.00 0.00 2.24
57 58 9.628500 AAAGTGAATAATACCCCTGAACTTATC 57.372 33.333 0.00 0.00 0.00 1.75
58 59 8.331931 AGTGAATAATACCCCTGAACTTATCA 57.668 34.615 0.00 0.00 36.38 2.15
59 60 8.778059 AGTGAATAATACCCCTGAACTTATCAA 58.222 33.333 0.00 0.00 37.67 2.57
60 61 9.403583 GTGAATAATACCCCTGAACTTATCAAA 57.596 33.333 0.00 0.00 37.67 2.69
61 62 9.983024 TGAATAATACCCCTGAACTTATCAAAA 57.017 29.630 0.00 0.00 37.67 2.44
85 86 9.965824 AAAAAGATCGAATTACAATTGTGAACT 57.034 25.926 21.42 10.10 0.00 3.01
86 87 9.612620 AAAAGATCGAATTACAATTGTGAACTC 57.387 29.630 21.42 12.37 0.00 3.01
87 88 8.553459 AAGATCGAATTACAATTGTGAACTCT 57.447 30.769 21.42 10.29 0.00 3.24
88 89 9.653287 AAGATCGAATTACAATTGTGAACTCTA 57.347 29.630 21.42 6.87 0.00 2.43
89 90 9.653287 AGATCGAATTACAATTGTGAACTCTAA 57.347 29.630 21.42 5.77 0.00 2.10
93 94 9.916397 CGAATTACAATTGTGAACTCTAATACC 57.084 33.333 21.42 5.97 0.00 2.73
94 95 9.916397 GAATTACAATTGTGAACTCTAATACCG 57.084 33.333 21.42 0.00 0.00 4.02
95 96 7.837202 TTACAATTGTGAACTCTAATACCGG 57.163 36.000 21.42 0.00 0.00 5.28
96 97 6.045072 ACAATTGTGAACTCTAATACCGGA 57.955 37.500 9.46 0.00 0.00 5.14
97 98 5.873164 ACAATTGTGAACTCTAATACCGGAC 59.127 40.000 9.46 0.00 0.00 4.79
98 99 5.670792 ATTGTGAACTCTAATACCGGACA 57.329 39.130 9.46 0.00 0.00 4.02
99 100 5.471556 TTGTGAACTCTAATACCGGACAA 57.528 39.130 9.46 0.00 0.00 3.18
100 101 5.471556 TGTGAACTCTAATACCGGACAAA 57.528 39.130 9.46 0.00 0.00 2.83
101 102 6.045072 TGTGAACTCTAATACCGGACAAAT 57.955 37.500 9.46 0.00 0.00 2.32
102 103 7.172868 TGTGAACTCTAATACCGGACAAATA 57.827 36.000 9.46 0.00 0.00 1.40
103 104 7.613585 TGTGAACTCTAATACCGGACAAATAA 58.386 34.615 9.46 0.00 0.00 1.40
104 105 7.546667 TGTGAACTCTAATACCGGACAAATAAC 59.453 37.037 9.46 0.00 0.00 1.89
105 106 7.010830 GTGAACTCTAATACCGGACAAATAACC 59.989 40.741 9.46 0.00 0.00 2.85
106 107 6.549433 ACTCTAATACCGGACAAATAACCA 57.451 37.500 9.46 0.00 0.00 3.67
107 108 7.133133 ACTCTAATACCGGACAAATAACCAT 57.867 36.000 9.46 0.00 0.00 3.55
108 109 8.253867 ACTCTAATACCGGACAAATAACCATA 57.746 34.615 9.46 0.00 0.00 2.74
109 110 8.146412 ACTCTAATACCGGACAAATAACCATAC 58.854 37.037 9.46 0.00 0.00 2.39
110 111 8.020777 TCTAATACCGGACAAATAACCATACA 57.979 34.615 9.46 0.00 0.00 2.29
111 112 8.145767 TCTAATACCGGACAAATAACCATACAG 58.854 37.037 9.46 0.00 0.00 2.74
112 113 4.563140 ACCGGACAAATAACCATACAGT 57.437 40.909 9.46 0.00 0.00 3.55
113 114 4.913784 ACCGGACAAATAACCATACAGTT 58.086 39.130 9.46 0.00 0.00 3.16
114 115 4.939439 ACCGGACAAATAACCATACAGTTC 59.061 41.667 9.46 0.00 0.00 3.01
115 116 5.183228 CCGGACAAATAACCATACAGTTCT 58.817 41.667 0.00 0.00 0.00 3.01
116 117 6.070653 ACCGGACAAATAACCATACAGTTCTA 60.071 38.462 9.46 0.00 0.00 2.10
117 118 6.257193 CCGGACAAATAACCATACAGTTCTAC 59.743 42.308 0.00 0.00 0.00 2.59
118 119 7.039882 CGGACAAATAACCATACAGTTCTACT 58.960 38.462 0.00 0.00 0.00 2.57
119 120 7.548075 CGGACAAATAACCATACAGTTCTACTT 59.452 37.037 0.00 0.00 0.00 2.24
120 121 8.880750 GGACAAATAACCATACAGTTCTACTTC 58.119 37.037 0.00 0.00 0.00 3.01
121 122 8.788325 ACAAATAACCATACAGTTCTACTTCC 57.212 34.615 0.00 0.00 0.00 3.46
122 123 8.380099 ACAAATAACCATACAGTTCTACTTCCA 58.620 33.333 0.00 0.00 0.00 3.53
123 124 9.226606 CAAATAACCATACAGTTCTACTTCCAA 57.773 33.333 0.00 0.00 0.00 3.53
124 125 8.788325 AATAACCATACAGTTCTACTTCCAAC 57.212 34.615 0.00 0.00 0.00 3.77
125 126 5.161943 ACCATACAGTTCTACTTCCAACC 57.838 43.478 0.00 0.00 0.00 3.77
126 127 4.019591 ACCATACAGTTCTACTTCCAACCC 60.020 45.833 0.00 0.00 0.00 4.11
127 128 4.225267 CCATACAGTTCTACTTCCAACCCT 59.775 45.833 0.00 0.00 0.00 4.34
128 129 3.771577 ACAGTTCTACTTCCAACCCTG 57.228 47.619 0.00 0.00 0.00 4.45
129 130 2.372172 ACAGTTCTACTTCCAACCCTGG 59.628 50.000 0.00 0.00 45.08 4.45
137 138 3.636231 CCAACCCTGGACGGCTCA 61.636 66.667 0.00 0.00 46.92 4.26
138 139 2.429930 CAACCCTGGACGGCTCAA 59.570 61.111 0.00 0.00 0.00 3.02
139 140 1.228124 CAACCCTGGACGGCTCAAA 60.228 57.895 0.00 0.00 0.00 2.69
140 141 1.228154 AACCCTGGACGGCTCAAAC 60.228 57.895 0.00 0.00 0.00 2.93
141 142 2.359975 CCCTGGACGGCTCAAACC 60.360 66.667 0.00 0.00 0.00 3.27
142 143 2.359975 CCTGGACGGCTCAAACCC 60.360 66.667 0.00 0.00 0.00 4.11
148 149 3.439008 CGGCTCAAACCCGGTTTT 58.561 55.556 13.13 0.00 41.99 2.43
149 150 1.007849 CGGCTCAAACCCGGTTTTG 60.008 57.895 17.72 17.72 41.99 2.44
150 151 1.448922 CGGCTCAAACCCGGTTTTGA 61.449 55.000 23.74 23.74 42.04 2.69
151 152 0.966179 GGCTCAAACCCGGTTTTGAT 59.034 50.000 25.15 0.00 43.03 2.57
152 153 1.336795 GGCTCAAACCCGGTTTTGATG 60.337 52.381 25.15 19.27 43.03 3.07
153 154 1.934849 GCTCAAACCCGGTTTTGATGC 60.935 52.381 25.15 23.73 43.03 3.91
154 155 0.676736 TCAAACCCGGTTTTGATGCC 59.323 50.000 21.85 0.00 39.94 4.40
155 156 0.390860 CAAACCCGGTTTTGATGCCA 59.609 50.000 18.90 0.00 38.54 4.92
156 157 1.001860 CAAACCCGGTTTTGATGCCAT 59.998 47.619 18.90 0.00 38.54 4.40
157 158 2.223803 AACCCGGTTTTGATGCCATA 57.776 45.000 0.00 0.00 0.00 2.74
158 159 1.470051 ACCCGGTTTTGATGCCATAC 58.530 50.000 0.00 0.00 0.00 2.39
159 160 0.380378 CCCGGTTTTGATGCCATACG 59.620 55.000 0.00 0.00 0.00 3.06
160 161 0.380378 CCGGTTTTGATGCCATACGG 59.620 55.000 0.00 0.00 0.00 4.02
161 162 1.374560 CGGTTTTGATGCCATACGGA 58.625 50.000 0.00 0.00 0.00 4.69
162 163 1.063469 CGGTTTTGATGCCATACGGAC 59.937 52.381 0.00 0.00 0.00 4.79
163 164 1.063469 GGTTTTGATGCCATACGGACG 59.937 52.381 0.00 0.00 0.00 4.79
164 165 2.004017 GTTTTGATGCCATACGGACGA 58.996 47.619 0.00 0.00 0.00 4.20
165 166 1.647346 TTTGATGCCATACGGACGAC 58.353 50.000 0.00 0.00 0.00 4.34
166 167 0.533032 TTGATGCCATACGGACGACA 59.467 50.000 0.00 0.00 0.00 4.35
167 168 0.750249 TGATGCCATACGGACGACAT 59.250 50.000 0.00 0.00 0.00 3.06
168 169 1.139989 GATGCCATACGGACGACATG 58.860 55.000 0.00 0.00 0.00 3.21
169 170 0.464036 ATGCCATACGGACGACATGT 59.536 50.000 0.00 0.00 0.00 3.21
180 181 2.099141 ACGACATGTCATCTTGGTGG 57.901 50.000 24.93 8.19 0.00 4.61
181 182 1.339055 ACGACATGTCATCTTGGTGGG 60.339 52.381 24.93 7.49 0.00 4.61
182 183 1.755179 GACATGTCATCTTGGTGGGG 58.245 55.000 21.07 0.00 0.00 4.96
183 184 1.004745 GACATGTCATCTTGGTGGGGT 59.995 52.381 21.07 0.00 0.00 4.95
184 185 1.004745 ACATGTCATCTTGGTGGGGTC 59.995 52.381 0.00 0.00 0.00 4.46
185 186 0.625849 ATGTCATCTTGGTGGGGTCC 59.374 55.000 0.00 0.00 0.00 4.46
186 187 0.770166 TGTCATCTTGGTGGGGTCCA 60.770 55.000 0.00 0.00 35.49 4.02
197 198 4.707791 GGGTCCACAACTTACCCG 57.292 61.111 0.00 0.00 43.33 5.28
198 199 2.060370 GGGTCCACAACTTACCCGA 58.940 57.895 0.00 0.00 43.33 5.14
199 200 0.036671 GGGTCCACAACTTACCCGAG 60.037 60.000 0.00 0.00 43.33 4.63
200 201 0.683412 GGTCCACAACTTACCCGAGT 59.317 55.000 0.00 0.00 0.00 4.18
201 202 1.337541 GGTCCACAACTTACCCGAGTC 60.338 57.143 0.00 0.00 0.00 3.36
202 203 1.342174 GTCCACAACTTACCCGAGTCA 59.658 52.381 0.00 0.00 0.00 3.41
203 204 1.616865 TCCACAACTTACCCGAGTCAG 59.383 52.381 0.00 0.00 0.00 3.51
204 205 1.429463 CACAACTTACCCGAGTCAGC 58.571 55.000 0.00 0.00 0.00 4.26
205 206 0.320697 ACAACTTACCCGAGTCAGCC 59.679 55.000 0.00 0.00 0.00 4.85
206 207 0.320374 CAACTTACCCGAGTCAGCCA 59.680 55.000 0.00 0.00 0.00 4.75
207 208 1.053424 AACTTACCCGAGTCAGCCAA 58.947 50.000 0.00 0.00 0.00 4.52
208 209 0.320697 ACTTACCCGAGTCAGCCAAC 59.679 55.000 0.00 0.00 0.00 3.77
209 210 0.320374 CTTACCCGAGTCAGCCAACA 59.680 55.000 0.00 0.00 0.00 3.33
210 211 0.034337 TTACCCGAGTCAGCCAACAC 59.966 55.000 0.00 0.00 0.00 3.32
211 212 1.116536 TACCCGAGTCAGCCAACACA 61.117 55.000 0.00 0.00 0.00 3.72
212 213 1.961277 CCCGAGTCAGCCAACACAC 60.961 63.158 0.00 0.00 0.00 3.82
213 214 1.227527 CCGAGTCAGCCAACACACA 60.228 57.895 0.00 0.00 0.00 3.72
214 215 1.224069 CCGAGTCAGCCAACACACAG 61.224 60.000 0.00 0.00 0.00 3.66
215 216 0.249447 CGAGTCAGCCAACACACAGA 60.249 55.000 0.00 0.00 0.00 3.41
216 217 1.606480 CGAGTCAGCCAACACACAGAT 60.606 52.381 0.00 0.00 0.00 2.90
217 218 2.072298 GAGTCAGCCAACACACAGATC 58.928 52.381 0.00 0.00 0.00 2.75
218 219 1.417517 AGTCAGCCAACACACAGATCA 59.582 47.619 0.00 0.00 0.00 2.92
219 220 1.532868 GTCAGCCAACACACAGATCAC 59.467 52.381 0.00 0.00 0.00 3.06
220 221 1.140652 TCAGCCAACACACAGATCACA 59.859 47.619 0.00 0.00 0.00 3.58
221 222 1.265095 CAGCCAACACACAGATCACAC 59.735 52.381 0.00 0.00 0.00 3.82
222 223 0.593128 GCCAACACACAGATCACACC 59.407 55.000 0.00 0.00 0.00 4.16
223 224 1.815408 GCCAACACACAGATCACACCT 60.815 52.381 0.00 0.00 0.00 4.00
224 225 2.146342 CCAACACACAGATCACACCTC 58.854 52.381 0.00 0.00 0.00 3.85
225 226 2.146342 CAACACACAGATCACACCTCC 58.854 52.381 0.00 0.00 0.00 4.30
226 227 0.687354 ACACACAGATCACACCTCCC 59.313 55.000 0.00 0.00 0.00 4.30
227 228 0.686789 CACACAGATCACACCTCCCA 59.313 55.000 0.00 0.00 0.00 4.37
228 229 0.687354 ACACAGATCACACCTCCCAC 59.313 55.000 0.00 0.00 0.00 4.61
229 230 0.036010 CACAGATCACACCTCCCACC 60.036 60.000 0.00 0.00 0.00 4.61
230 231 0.473694 ACAGATCACACCTCCCACCA 60.474 55.000 0.00 0.00 0.00 4.17
231 232 0.692476 CAGATCACACCTCCCACCAA 59.308 55.000 0.00 0.00 0.00 3.67
232 233 1.073763 CAGATCACACCTCCCACCAAA 59.926 52.381 0.00 0.00 0.00 3.28
233 234 1.352352 AGATCACACCTCCCACCAAAG 59.648 52.381 0.00 0.00 0.00 2.77
234 235 0.251341 ATCACACCTCCCACCAAAGC 60.251 55.000 0.00 0.00 0.00 3.51
235 236 1.903404 CACACCTCCCACCAAAGCC 60.903 63.158 0.00 0.00 0.00 4.35
236 237 2.084930 ACACCTCCCACCAAAGCCT 61.085 57.895 0.00 0.00 0.00 4.58
237 238 1.303643 CACCTCCCACCAAAGCCTC 60.304 63.158 0.00 0.00 0.00 4.70
238 239 1.774217 ACCTCCCACCAAAGCCTCA 60.774 57.895 0.00 0.00 0.00 3.86
239 240 1.303643 CCTCCCACCAAAGCCTCAC 60.304 63.158 0.00 0.00 0.00 3.51
240 241 1.303643 CTCCCACCAAAGCCTCACC 60.304 63.158 0.00 0.00 0.00 4.02
241 242 1.774217 TCCCACCAAAGCCTCACCT 60.774 57.895 0.00 0.00 0.00 4.00
242 243 1.303643 CCCACCAAAGCCTCACCTC 60.304 63.158 0.00 0.00 0.00 3.85
243 244 1.303643 CCACCAAAGCCTCACCTCC 60.304 63.158 0.00 0.00 0.00 4.30
244 245 1.763770 CACCAAAGCCTCACCTCCT 59.236 57.895 0.00 0.00 0.00 3.69
245 246 0.111253 CACCAAAGCCTCACCTCCTT 59.889 55.000 0.00 0.00 0.00 3.36
246 247 0.111253 ACCAAAGCCTCACCTCCTTG 59.889 55.000 0.00 0.00 0.00 3.61
247 248 1.246737 CCAAAGCCTCACCTCCTTGC 61.247 60.000 0.00 0.00 0.00 4.01
248 249 0.251077 CAAAGCCTCACCTCCTTGCT 60.251 55.000 0.00 0.00 0.00 3.91
249 250 0.037447 AAAGCCTCACCTCCTTGCTC 59.963 55.000 0.00 0.00 0.00 4.26
250 251 1.130054 AAGCCTCACCTCCTTGCTCA 61.130 55.000 0.00 0.00 0.00 4.26
251 252 1.130054 AGCCTCACCTCCTTGCTCAA 61.130 55.000 0.00 0.00 0.00 3.02
252 253 0.250901 GCCTCACCTCCTTGCTCAAA 60.251 55.000 0.00 0.00 0.00 2.69
253 254 1.819305 GCCTCACCTCCTTGCTCAAAA 60.819 52.381 0.00 0.00 0.00 2.44
254 255 2.586425 CCTCACCTCCTTGCTCAAAAA 58.414 47.619 0.00 0.00 0.00 1.94
276 277 2.278332 AAAAAGCCTCACCTCTCACC 57.722 50.000 0.00 0.00 0.00 4.02
277 278 0.035458 AAAAGCCTCACCTCTCACCG 59.965 55.000 0.00 0.00 0.00 4.94
278 279 2.456287 AAAGCCTCACCTCTCACCGC 62.456 60.000 0.00 0.00 0.00 5.68
279 280 4.459089 GCCTCACCTCTCACCGCC 62.459 72.222 0.00 0.00 0.00 6.13
280 281 2.681778 CCTCACCTCTCACCGCCT 60.682 66.667 0.00 0.00 0.00 5.52
281 282 2.716017 CCTCACCTCTCACCGCCTC 61.716 68.421 0.00 0.00 0.00 4.70
282 283 3.057547 CTCACCTCTCACCGCCTCG 62.058 68.421 0.00 0.00 0.00 4.63
283 284 4.803426 CACCTCTCACCGCCTCGC 62.803 72.222 0.00 0.00 0.00 5.03
285 286 4.200283 CCTCTCACCGCCTCGCTC 62.200 72.222 0.00 0.00 0.00 5.03
286 287 4.200283 CTCTCACCGCCTCGCTCC 62.200 72.222 0.00 0.00 0.00 4.70
294 295 2.442272 GCCTCGCTCCCTCACCTA 60.442 66.667 0.00 0.00 0.00 3.08
295 296 2.787567 GCCTCGCTCCCTCACCTAC 61.788 68.421 0.00 0.00 0.00 3.18
296 297 1.076632 CCTCGCTCCCTCACCTACT 60.077 63.158 0.00 0.00 0.00 2.57
297 298 1.388065 CCTCGCTCCCTCACCTACTG 61.388 65.000 0.00 0.00 0.00 2.74
298 299 0.681564 CTCGCTCCCTCACCTACTGT 60.682 60.000 0.00 0.00 0.00 3.55
299 300 0.680280 TCGCTCCCTCACCTACTGTC 60.680 60.000 0.00 0.00 0.00 3.51
300 301 1.810532 GCTCCCTCACCTACTGTCG 59.189 63.158 0.00 0.00 0.00 4.35
301 302 0.680280 GCTCCCTCACCTACTGTCGA 60.680 60.000 0.00 0.00 0.00 4.20
302 303 2.024825 GCTCCCTCACCTACTGTCGAT 61.025 57.143 0.00 0.00 0.00 3.59
303 304 1.678627 CTCCCTCACCTACTGTCGATG 59.321 57.143 0.00 0.00 0.00 3.84
304 305 0.103208 CCCTCACCTACTGTCGATGC 59.897 60.000 0.00 0.00 0.00 3.91
305 306 0.103208 CCTCACCTACTGTCGATGCC 59.897 60.000 0.00 0.00 0.00 4.40
306 307 0.103208 CTCACCTACTGTCGATGCCC 59.897 60.000 0.00 0.00 0.00 5.36
307 308 1.144057 CACCTACTGTCGATGCCCC 59.856 63.158 0.00 0.00 0.00 5.80
308 309 2.064581 ACCTACTGTCGATGCCCCC 61.065 63.158 0.00 0.00 0.00 5.40
309 310 1.762460 CCTACTGTCGATGCCCCCT 60.762 63.158 0.00 0.00 0.00 4.79
310 311 1.742768 CTACTGTCGATGCCCCCTC 59.257 63.158 0.00 0.00 0.00 4.30
311 312 1.749334 CTACTGTCGATGCCCCCTCC 61.749 65.000 0.00 0.00 0.00 4.30
312 313 2.523740 TACTGTCGATGCCCCCTCCA 62.524 60.000 0.00 0.00 0.00 3.86
313 314 3.391665 CTGTCGATGCCCCCTCCAC 62.392 68.421 0.00 0.00 0.00 4.02
314 315 3.083997 GTCGATGCCCCCTCCACT 61.084 66.667 0.00 0.00 0.00 4.00
315 316 1.760875 GTCGATGCCCCCTCCACTA 60.761 63.158 0.00 0.00 0.00 2.74
316 317 1.122019 GTCGATGCCCCCTCCACTAT 61.122 60.000 0.00 0.00 0.00 2.12
317 318 1.121407 TCGATGCCCCCTCCACTATG 61.121 60.000 0.00 0.00 0.00 2.23
318 319 1.121407 CGATGCCCCCTCCACTATGA 61.121 60.000 0.00 0.00 0.00 2.15
319 320 1.366319 GATGCCCCCTCCACTATGAT 58.634 55.000 0.00 0.00 0.00 2.45
320 321 1.280421 GATGCCCCCTCCACTATGATC 59.720 57.143 0.00 0.00 0.00 2.92
321 322 0.768221 TGCCCCCTCCACTATGATCC 60.768 60.000 0.00 0.00 0.00 3.36
322 323 1.492993 GCCCCCTCCACTATGATCCC 61.493 65.000 0.00 0.00 0.00 3.85
323 324 0.842467 CCCCCTCCACTATGATCCCC 60.842 65.000 0.00 0.00 0.00 4.81
324 325 1.194781 CCCCTCCACTATGATCCCCG 61.195 65.000 0.00 0.00 0.00 5.73
325 326 1.194781 CCCTCCACTATGATCCCCGG 61.195 65.000 0.00 0.00 0.00 5.73
326 327 0.471971 CCTCCACTATGATCCCCGGT 60.472 60.000 0.00 0.00 0.00 5.28
327 328 1.424638 CTCCACTATGATCCCCGGTT 58.575 55.000 0.00 0.00 0.00 4.44
328 329 1.768870 CTCCACTATGATCCCCGGTTT 59.231 52.381 0.00 0.00 0.00 3.27
329 330 1.488812 TCCACTATGATCCCCGGTTTG 59.511 52.381 0.00 0.00 0.00 2.93
330 331 1.488812 CCACTATGATCCCCGGTTTGA 59.511 52.381 0.00 0.00 0.00 2.69
331 332 2.106511 CCACTATGATCCCCGGTTTGAT 59.893 50.000 0.00 0.00 0.00 2.57
332 333 3.403038 CACTATGATCCCCGGTTTGATC 58.597 50.000 15.36 15.36 38.27 2.92
333 334 2.372172 ACTATGATCCCCGGTTTGATCC 59.628 50.000 18.04 6.12 37.23 3.36
334 335 0.478507 ATGATCCCCGGTTTGATCCC 59.521 55.000 18.04 2.11 37.23 3.85
335 336 0.623324 TGATCCCCGGTTTGATCCCT 60.623 55.000 18.04 0.00 37.23 4.20
336 337 0.179018 GATCCCCGGTTTGATCCCTG 60.179 60.000 12.52 0.00 32.92 4.45
337 338 0.623324 ATCCCCGGTTTGATCCCTGA 60.623 55.000 0.00 0.00 0.00 3.86
338 339 1.224592 CCCCGGTTTGATCCCTGAG 59.775 63.158 0.00 0.00 0.00 3.35
339 340 1.271840 CCCCGGTTTGATCCCTGAGA 61.272 60.000 0.00 0.00 0.00 3.27
340 341 0.618458 CCCGGTTTGATCCCTGAGAA 59.382 55.000 0.00 0.00 0.00 2.87
341 342 1.407437 CCCGGTTTGATCCCTGAGAAG 60.407 57.143 0.00 0.00 0.00 2.85
342 343 1.555075 CCGGTTTGATCCCTGAGAAGA 59.445 52.381 0.00 0.00 0.00 2.87
343 344 2.419297 CCGGTTTGATCCCTGAGAAGAG 60.419 54.545 0.00 0.00 0.00 2.85
344 345 2.234908 CGGTTTGATCCCTGAGAAGAGT 59.765 50.000 0.00 0.00 0.00 3.24
345 346 3.447586 CGGTTTGATCCCTGAGAAGAGTA 59.552 47.826 0.00 0.00 0.00 2.59
346 347 4.678309 CGGTTTGATCCCTGAGAAGAGTAC 60.678 50.000 0.00 0.00 0.00 2.73
347 348 4.223032 GGTTTGATCCCTGAGAAGAGTACA 59.777 45.833 0.00 0.00 0.00 2.90
348 349 5.280011 GGTTTGATCCCTGAGAAGAGTACAA 60.280 44.000 0.00 0.00 0.00 2.41
349 350 5.407407 TTGATCCCTGAGAAGAGTACAAC 57.593 43.478 0.00 0.00 0.00 3.32
350 351 4.416516 TGATCCCTGAGAAGAGTACAACA 58.583 43.478 0.00 0.00 0.00 3.33
351 352 4.838423 TGATCCCTGAGAAGAGTACAACAA 59.162 41.667 0.00 0.00 0.00 2.83
352 353 5.485353 TGATCCCTGAGAAGAGTACAACAAT 59.515 40.000 0.00 0.00 0.00 2.71
353 354 6.667848 TGATCCCTGAGAAGAGTACAACAATA 59.332 38.462 0.00 0.00 0.00 1.90
354 355 6.282199 TCCCTGAGAAGAGTACAACAATAC 57.718 41.667 0.00 0.00 0.00 1.89
355 356 6.017192 TCCCTGAGAAGAGTACAACAATACT 58.983 40.000 0.00 0.00 38.13 2.12
356 357 7.179966 TCCCTGAGAAGAGTACAACAATACTA 58.820 38.462 0.00 0.00 35.48 1.82
357 358 7.839705 TCCCTGAGAAGAGTACAACAATACTAT 59.160 37.037 0.00 0.00 35.48 2.12
358 359 9.132923 CCCTGAGAAGAGTACAACAATACTATA 57.867 37.037 0.00 0.00 35.48 1.31
364 365 9.530633 GAAGAGTACAACAATACTATAGTTGGG 57.469 37.037 11.40 3.44 45.08 4.12
365 366 8.834004 AGAGTACAACAATACTATAGTTGGGA 57.166 34.615 11.40 0.00 45.08 4.37
366 367 8.915036 AGAGTACAACAATACTATAGTTGGGAG 58.085 37.037 11.40 1.89 45.08 4.30
367 368 8.605325 AGTACAACAATACTATAGTTGGGAGT 57.395 34.615 11.40 7.23 45.08 3.85
368 369 9.705103 AGTACAACAATACTATAGTTGGGAGTA 57.295 33.333 11.40 6.37 45.08 2.59
377 378 9.914834 ATACTATAGTTGGGAGTAAAATTTGCA 57.085 29.630 11.40 0.00 0.00 4.08
378 379 8.823220 ACTATAGTTGGGAGTAAAATTTGCAT 57.177 30.769 0.00 0.00 0.00 3.96
379 380 8.903820 ACTATAGTTGGGAGTAAAATTTGCATC 58.096 33.333 0.00 0.00 0.00 3.91
380 381 7.961326 ATAGTTGGGAGTAAAATTTGCATCT 57.039 32.000 0.00 0.00 0.00 2.90
381 382 6.029346 AGTTGGGAGTAAAATTTGCATCTG 57.971 37.500 0.00 0.00 0.00 2.90
382 383 5.774690 AGTTGGGAGTAAAATTTGCATCTGA 59.225 36.000 0.00 0.00 0.00 3.27
383 384 6.267471 AGTTGGGAGTAAAATTTGCATCTGAA 59.733 34.615 0.00 0.00 0.00 3.02
384 385 6.662865 TGGGAGTAAAATTTGCATCTGAAA 57.337 33.333 0.00 0.00 0.00 2.69
385 386 7.060383 TGGGAGTAAAATTTGCATCTGAAAA 57.940 32.000 0.00 0.00 0.00 2.29
386 387 7.504403 TGGGAGTAAAATTTGCATCTGAAAAA 58.496 30.769 0.00 0.00 0.00 1.94
407 408 6.526566 AAAATGTAGTCAAGACTCGTCAAC 57.473 37.500 5.91 0.00 42.54 3.18
408 409 4.848562 ATGTAGTCAAGACTCGTCAACA 57.151 40.909 5.91 5.68 42.54 3.33
409 410 4.848562 TGTAGTCAAGACTCGTCAACAT 57.151 40.909 5.91 0.00 42.54 2.71
410 411 4.546570 TGTAGTCAAGACTCGTCAACATG 58.453 43.478 5.91 0.00 42.54 3.21
411 412 4.277423 TGTAGTCAAGACTCGTCAACATGA 59.723 41.667 5.91 0.00 42.54 3.07
412 413 3.906998 AGTCAAGACTCGTCAACATGAG 58.093 45.455 0.00 0.00 41.04 2.90
413 414 3.570125 AGTCAAGACTCGTCAACATGAGA 59.430 43.478 0.00 0.00 37.83 3.27
414 415 4.219507 AGTCAAGACTCGTCAACATGAGAT 59.780 41.667 0.00 0.00 37.83 2.75
415 416 4.560819 GTCAAGACTCGTCAACATGAGATC 59.439 45.833 0.00 0.00 37.83 2.75
416 417 4.460731 TCAAGACTCGTCAACATGAGATCT 59.539 41.667 0.00 0.00 37.83 2.75
417 418 5.648092 TCAAGACTCGTCAACATGAGATCTA 59.352 40.000 0.00 0.00 37.83 1.98
418 419 6.151144 TCAAGACTCGTCAACATGAGATCTAA 59.849 38.462 0.00 0.00 37.83 2.10
419 420 6.707440 AGACTCGTCAACATGAGATCTAAT 57.293 37.500 0.00 0.00 37.83 1.73
420 421 7.106439 AGACTCGTCAACATGAGATCTAATT 57.894 36.000 0.00 0.00 37.83 1.40
421 422 7.551585 AGACTCGTCAACATGAGATCTAATTT 58.448 34.615 0.00 0.00 37.83 1.82
422 423 8.037758 AGACTCGTCAACATGAGATCTAATTTT 58.962 33.333 0.00 0.00 37.83 1.82
423 424 7.968246 ACTCGTCAACATGAGATCTAATTTTG 58.032 34.615 11.45 11.45 37.83 2.44
424 425 7.819415 ACTCGTCAACATGAGATCTAATTTTGA 59.181 33.333 15.13 15.13 37.83 2.69
425 426 8.546597 TCGTCAACATGAGATCTAATTTTGAA 57.453 30.769 19.18 6.32 0.00 2.69
426 427 8.659491 TCGTCAACATGAGATCTAATTTTGAAG 58.341 33.333 19.18 19.93 0.00 3.02
427 428 8.659491 CGTCAACATGAGATCTAATTTTGAAGA 58.341 33.333 21.44 3.03 0.00 2.87
435 436 9.559732 TGAGATCTAATTTTGAAGAACTCAACA 57.440 29.630 11.45 0.00 44.07 3.33
450 451 2.285083 TCAACAAGAGAACCACAACCG 58.715 47.619 0.00 0.00 0.00 4.44
451 452 2.014128 CAACAAGAGAACCACAACCGT 58.986 47.619 0.00 0.00 0.00 4.83
452 453 1.663695 ACAAGAGAACCACAACCGTG 58.336 50.000 0.00 0.00 43.21 4.94
453 454 1.208535 ACAAGAGAACCACAACCGTGA 59.791 47.619 0.00 0.00 46.80 4.35
454 455 2.285083 CAAGAGAACCACAACCGTGAA 58.715 47.619 0.00 0.00 46.80 3.18
455 456 2.680841 CAAGAGAACCACAACCGTGAAA 59.319 45.455 0.00 0.00 46.80 2.69
456 457 2.993937 AGAGAACCACAACCGTGAAAA 58.006 42.857 0.00 0.00 46.80 2.29
457 458 2.681344 AGAGAACCACAACCGTGAAAAC 59.319 45.455 0.00 0.00 46.80 2.43
458 459 1.399089 AGAACCACAACCGTGAAAACG 59.601 47.619 0.00 0.00 46.80 3.60
459 460 1.397692 GAACCACAACCGTGAAAACGA 59.602 47.619 0.00 0.00 46.80 3.85
460 461 1.670791 ACCACAACCGTGAAAACGAT 58.329 45.000 0.00 0.00 46.80 3.73
461 462 2.018515 ACCACAACCGTGAAAACGATT 58.981 42.857 0.00 0.00 46.80 3.34
462 463 2.424246 ACCACAACCGTGAAAACGATTT 59.576 40.909 0.00 0.00 46.80 2.17
463 464 2.786578 CCACAACCGTGAAAACGATTTG 59.213 45.455 0.00 5.61 46.80 2.32
464 465 3.430931 CACAACCGTGAAAACGATTTGT 58.569 40.909 0.00 10.50 46.80 2.83
465 466 4.496010 CCACAACCGTGAAAACGATTTGTA 60.496 41.667 13.95 0.00 46.80 2.41
466 467 5.029014 CACAACCGTGAAAACGATTTGTAA 58.971 37.500 13.95 0.00 46.80 2.41
467 468 5.683743 CACAACCGTGAAAACGATTTGTAAT 59.316 36.000 13.95 0.00 46.80 1.89
468 469 6.197468 CACAACCGTGAAAACGATTTGTAATT 59.803 34.615 13.95 0.00 46.80 1.40
469 470 6.752815 ACAACCGTGAAAACGATTTGTAATTT 59.247 30.769 13.18 0.00 37.37 1.82
470 471 6.741448 ACCGTGAAAACGATTTGTAATTTG 57.259 33.333 0.00 0.00 34.64 2.32
471 472 6.496571 ACCGTGAAAACGATTTGTAATTTGA 58.503 32.000 0.00 0.00 34.64 2.69
472 473 6.973474 ACCGTGAAAACGATTTGTAATTTGAA 59.027 30.769 0.00 0.00 34.64 2.69
473 474 7.043920 ACCGTGAAAACGATTTGTAATTTGAAC 60.044 33.333 0.00 0.00 34.64 3.18
474 475 7.166804 CCGTGAAAACGATTTGTAATTTGAACT 59.833 33.333 0.00 0.00 34.64 3.01
475 476 8.528295 CGTGAAAACGATTTGTAATTTGAACTT 58.472 29.630 0.00 0.00 34.64 2.66
476 477 9.618410 GTGAAAACGATTTGTAATTTGAACTTG 57.382 29.630 0.00 0.00 0.00 3.16
477 478 9.574458 TGAAAACGATTTGTAATTTGAACTTGA 57.426 25.926 0.00 0.00 0.00 3.02
479 480 9.796120 AAAACGATTTGTAATTTGAACTTGAGA 57.204 25.926 0.00 0.00 0.00 3.27
480 481 9.450807 AAACGATTTGTAATTTGAACTTGAGAG 57.549 29.630 0.00 0.00 0.00 3.20
481 482 8.378172 ACGATTTGTAATTTGAACTTGAGAGA 57.622 30.769 0.00 0.00 0.00 3.10
482 483 9.003658 ACGATTTGTAATTTGAACTTGAGAGAT 57.996 29.630 0.00 0.00 0.00 2.75
483 484 9.270576 CGATTTGTAATTTGAACTTGAGAGATG 57.729 33.333 0.00 0.00 0.00 2.90
486 487 9.950680 TTTGTAATTTGAACTTGAGAGATGTTC 57.049 29.630 0.00 0.00 38.59 3.18
487 488 8.908786 TGTAATTTGAACTTGAGAGATGTTCT 57.091 30.769 0.00 0.00 38.80 3.01
488 489 9.342308 TGTAATTTGAACTTGAGAGATGTTCTT 57.658 29.630 0.00 0.00 38.80 2.52
498 499 8.768957 CTTGAGAGATGTTCTTAAGTGAATGA 57.231 34.615 1.63 0.00 41.94 2.57
499 500 9.212641 CTTGAGAGATGTTCTTAAGTGAATGAA 57.787 33.333 1.63 0.00 41.94 2.57
500 501 9.559732 TTGAGAGATGTTCTTAAGTGAATGAAA 57.440 29.630 1.63 0.00 35.87 2.69
501 502 9.730705 TGAGAGATGTTCTTAAGTGAATGAAAT 57.269 29.630 1.63 0.00 35.87 2.17
503 504 9.956640 AGAGATGTTCTTAAGTGAATGAAATCT 57.043 29.630 1.63 2.07 29.61 2.40
523 524 9.788960 GAAATCTAGAAAAACACATACCAATCC 57.211 33.333 0.00 0.00 0.00 3.01
524 525 9.533831 AAATCTAGAAAAACACATACCAATCCT 57.466 29.630 0.00 0.00 0.00 3.24
525 526 8.738645 ATCTAGAAAAACACATACCAATCCTC 57.261 34.615 0.00 0.00 0.00 3.71
526 527 7.918076 TCTAGAAAAACACATACCAATCCTCT 58.082 34.615 0.00 0.00 0.00 3.69
527 528 9.042450 TCTAGAAAAACACATACCAATCCTCTA 57.958 33.333 0.00 0.00 0.00 2.43
528 529 9.838339 CTAGAAAAACACATACCAATCCTCTAT 57.162 33.333 0.00 0.00 0.00 1.98
530 531 9.178758 AGAAAAACACATACCAATCCTCTATTC 57.821 33.333 0.00 0.00 0.00 1.75
531 532 7.881775 AAAACACATACCAATCCTCTATTCC 57.118 36.000 0.00 0.00 0.00 3.01
532 533 5.568620 ACACATACCAATCCTCTATTCCC 57.431 43.478 0.00 0.00 0.00 3.97
533 534 5.227593 ACACATACCAATCCTCTATTCCCT 58.772 41.667 0.00 0.00 0.00 4.20
534 535 5.672194 ACACATACCAATCCTCTATTCCCTT 59.328 40.000 0.00 0.00 0.00 3.95
535 536 6.183361 ACACATACCAATCCTCTATTCCCTTC 60.183 42.308 0.00 0.00 0.00 3.46
536 537 5.310857 ACATACCAATCCTCTATTCCCTTCC 59.689 44.000 0.00 0.00 0.00 3.46
537 538 2.706190 ACCAATCCTCTATTCCCTTCCG 59.294 50.000 0.00 0.00 0.00 4.30
538 539 2.706190 CCAATCCTCTATTCCCTTCCGT 59.294 50.000 0.00 0.00 0.00 4.69
539 540 3.901844 CCAATCCTCTATTCCCTTCCGTA 59.098 47.826 0.00 0.00 0.00 4.02
540 541 4.021016 CCAATCCTCTATTCCCTTCCGTAG 60.021 50.000 0.00 0.00 0.00 3.51
555 556 1.757682 CGTAGGTGAGGCTCTTCTCT 58.242 55.000 16.72 9.84 34.98 3.10
556 557 1.673920 CGTAGGTGAGGCTCTTCTCTC 59.326 57.143 16.72 8.73 34.98 3.20
557 558 2.028876 GTAGGTGAGGCTCTTCTCTCC 58.971 57.143 16.72 8.36 43.82 3.71
558 559 0.325203 AGGTGAGGCTCTTCTCTCCC 60.325 60.000 16.72 4.34 44.28 4.30
559 560 0.616111 GGTGAGGCTCTTCTCTCCCA 60.616 60.000 16.72 0.00 39.96 4.37
560 561 1.494960 GTGAGGCTCTTCTCTCCCAT 58.505 55.000 16.72 0.00 34.98 4.00
561 562 1.836802 GTGAGGCTCTTCTCTCCCATT 59.163 52.381 16.72 0.00 34.98 3.16
562 563 2.238395 GTGAGGCTCTTCTCTCCCATTT 59.762 50.000 16.72 0.00 34.98 2.32
563 564 2.915604 TGAGGCTCTTCTCTCCCATTTT 59.084 45.455 16.72 0.00 34.98 1.82
564 565 3.331889 TGAGGCTCTTCTCTCCCATTTTT 59.668 43.478 16.72 0.00 34.98 1.94
565 566 4.536090 TGAGGCTCTTCTCTCCCATTTTTA 59.464 41.667 16.72 0.00 34.98 1.52
566 567 4.849518 AGGCTCTTCTCTCCCATTTTTAC 58.150 43.478 0.00 0.00 0.00 2.01
567 568 4.538089 AGGCTCTTCTCTCCCATTTTTACT 59.462 41.667 0.00 0.00 0.00 2.24
568 569 4.878971 GGCTCTTCTCTCCCATTTTTACTC 59.121 45.833 0.00 0.00 0.00 2.59
569 570 4.878971 GCTCTTCTCTCCCATTTTTACTCC 59.121 45.833 0.00 0.00 0.00 3.85
570 571 5.338789 GCTCTTCTCTCCCATTTTTACTCCT 60.339 44.000 0.00 0.00 0.00 3.69
571 572 6.704056 TCTTCTCTCCCATTTTTACTCCTT 57.296 37.500 0.00 0.00 0.00 3.36
572 573 6.712276 TCTTCTCTCCCATTTTTACTCCTTC 58.288 40.000 0.00 0.00 0.00 3.46
573 574 5.437191 TCTCTCCCATTTTTACTCCTTCC 57.563 43.478 0.00 0.00 0.00 3.46
574 575 4.849810 TCTCTCCCATTTTTACTCCTTCCA 59.150 41.667 0.00 0.00 0.00 3.53
575 576 5.492524 TCTCTCCCATTTTTACTCCTTCCAT 59.507 40.000 0.00 0.00 0.00 3.41
576 577 5.509498 TCTCCCATTTTTACTCCTTCCATG 58.491 41.667 0.00 0.00 0.00 3.66
577 578 4.609301 TCCCATTTTTACTCCTTCCATGG 58.391 43.478 4.97 4.97 0.00 3.66
578 579 3.706086 CCCATTTTTACTCCTTCCATGGG 59.294 47.826 13.02 0.00 42.65 4.00
579 580 4.352893 CCATTTTTACTCCTTCCATGGGT 58.647 43.478 13.02 3.67 0.00 4.51
580 581 4.160252 CCATTTTTACTCCTTCCATGGGTG 59.840 45.833 13.02 4.87 0.00 4.61
581 582 4.733077 TTTTTACTCCTTCCATGGGTGA 57.267 40.909 13.02 5.28 0.00 4.02
582 583 4.301072 TTTTACTCCTTCCATGGGTGAG 57.699 45.455 13.02 16.65 0.00 3.51
583 584 2.940514 TACTCCTTCCATGGGTGAGA 57.059 50.000 24.04 11.88 0.00 3.27
584 585 1.280457 ACTCCTTCCATGGGTGAGAC 58.720 55.000 24.04 0.00 0.00 3.36
585 586 1.203364 ACTCCTTCCATGGGTGAGACT 60.203 52.381 24.04 7.76 0.00 3.24
586 587 1.484240 CTCCTTCCATGGGTGAGACTC 59.516 57.143 13.02 0.00 0.00 3.36
587 588 1.079490 TCCTTCCATGGGTGAGACTCT 59.921 52.381 13.02 0.00 0.00 3.24
588 589 1.209019 CCTTCCATGGGTGAGACTCTG 59.791 57.143 13.02 0.00 0.00 3.35
589 590 1.905215 CTTCCATGGGTGAGACTCTGT 59.095 52.381 13.02 0.00 0.00 3.41
590 591 1.269958 TCCATGGGTGAGACTCTGTG 58.730 55.000 13.02 0.00 0.00 3.66
591 592 0.251354 CCATGGGTGAGACTCTGTGG 59.749 60.000 2.85 1.59 0.00 4.17
592 593 0.979665 CATGGGTGAGACTCTGTGGT 59.020 55.000 3.68 0.00 0.00 4.16
593 594 2.179427 CATGGGTGAGACTCTGTGGTA 58.821 52.381 3.68 0.00 0.00 3.25
594 595 2.391926 TGGGTGAGACTCTGTGGTAA 57.608 50.000 3.68 0.00 0.00 2.85
595 596 2.902608 TGGGTGAGACTCTGTGGTAAT 58.097 47.619 3.68 0.00 0.00 1.89
596 597 2.567169 TGGGTGAGACTCTGTGGTAATG 59.433 50.000 3.68 0.00 0.00 1.90
597 598 2.832129 GGGTGAGACTCTGTGGTAATGA 59.168 50.000 3.68 0.00 0.00 2.57
598 599 3.368531 GGGTGAGACTCTGTGGTAATGAC 60.369 52.174 3.68 0.00 0.00 3.06
599 600 3.511934 GGTGAGACTCTGTGGTAATGACT 59.488 47.826 3.68 0.00 0.00 3.41
600 601 4.489810 GTGAGACTCTGTGGTAATGACTG 58.510 47.826 3.68 0.00 0.00 3.51
601 602 4.021894 GTGAGACTCTGTGGTAATGACTGT 60.022 45.833 3.68 0.00 0.00 3.55
602 603 4.218635 TGAGACTCTGTGGTAATGACTGTC 59.781 45.833 3.68 0.00 0.00 3.51
603 604 3.191581 AGACTCTGTGGTAATGACTGTCG 59.808 47.826 2.98 0.00 0.00 4.35
604 605 2.263077 CTCTGTGGTAATGACTGTCGC 58.737 52.381 2.98 0.00 0.00 5.19
605 606 1.067142 TCTGTGGTAATGACTGTCGCC 60.067 52.381 2.98 3.80 0.00 5.54
606 607 0.389296 TGTGGTAATGACTGTCGCCG 60.389 55.000 2.98 0.00 0.00 6.46
607 608 1.082117 GTGGTAATGACTGTCGCCGG 61.082 60.000 0.00 0.00 0.00 6.13
608 609 1.252215 TGGTAATGACTGTCGCCGGA 61.252 55.000 5.05 0.00 0.00 5.14
609 610 0.804933 GGTAATGACTGTCGCCGGAC 60.805 60.000 5.05 0.00 43.71 4.79
610 611 1.138036 TAATGACTGTCGCCGGACG 59.862 57.895 5.05 9.12 46.49 4.79
611 612 2.877360 TAATGACTGTCGCCGGACGC 62.877 60.000 5.05 5.74 46.49 5.19
620 621 3.597728 GCCGGACGCCACCAAAAA 61.598 61.111 5.05 0.00 0.00 1.94
639 640 3.659183 AAAGTTGGGAGATCAGATGGG 57.341 47.619 0.00 0.00 0.00 4.00
640 641 1.516110 AGTTGGGAGATCAGATGGGG 58.484 55.000 0.00 0.00 0.00 4.96
641 642 0.179006 GTTGGGAGATCAGATGGGGC 60.179 60.000 0.00 0.00 0.00 5.80
642 643 0.327867 TTGGGAGATCAGATGGGGCT 60.328 55.000 0.00 0.00 0.00 5.19
643 644 0.765903 TGGGAGATCAGATGGGGCTC 60.766 60.000 0.00 0.00 0.00 4.70
644 645 0.765903 GGGAGATCAGATGGGGCTCA 60.766 60.000 0.00 0.00 0.00 4.26
650 651 2.607750 AGATGGGGCTCACACCGT 60.608 61.111 0.00 0.00 0.00 4.83
679 681 0.941542 CTTTTGGTTCGTTCCTGCGA 59.058 50.000 0.00 0.00 39.28 5.10
680 682 1.535462 CTTTTGGTTCGTTCCTGCGAT 59.465 47.619 0.00 0.00 40.76 4.58
729 732 5.665701 GCAGAAGAGTCGAACGAATTTGTAC 60.666 44.000 0.00 0.00 0.00 2.90
739 742 4.203654 ACGAATTTGTACTTCTCTCCCC 57.796 45.455 0.00 0.00 0.00 4.81
740 743 3.838903 ACGAATTTGTACTTCTCTCCCCT 59.161 43.478 0.00 0.00 0.00 4.79
741 744 4.286291 ACGAATTTGTACTTCTCTCCCCTT 59.714 41.667 0.00 0.00 0.00 3.95
742 745 4.870991 CGAATTTGTACTTCTCTCCCCTTC 59.129 45.833 0.00 0.00 0.00 3.46
743 746 5.337652 CGAATTTGTACTTCTCTCCCCTTCT 60.338 44.000 0.00 0.00 0.00 2.85
744 747 6.127423 CGAATTTGTACTTCTCTCCCCTTCTA 60.127 42.308 0.00 0.00 0.00 2.10
747 750 4.857679 TGTACTTCTCTCCCCTTCTACTC 58.142 47.826 0.00 0.00 0.00 2.59
755 758 2.763448 CTCCCCTTCTACTCCTGAACAG 59.237 54.545 0.00 0.00 0.00 3.16
824 831 1.678970 GGCTGGCTGGGTTTCGATT 60.679 57.895 0.00 0.00 0.00 3.34
920 937 4.039357 CAGCACAGCACAGCAGCC 62.039 66.667 0.00 0.00 34.23 4.85
1020 1058 0.972134 TGAGGTTCTGGTCTCTGCTG 59.028 55.000 0.00 0.00 0.00 4.41
1138 1176 2.790433 GGAGGCACATAAACAAGGTCA 58.210 47.619 0.00 0.00 0.00 4.02
1141 1179 4.265073 GAGGCACATAAACAAGGTCATCT 58.735 43.478 0.00 0.00 0.00 2.90
1203 1255 7.172019 AGTGATTTCAATCCATTTGTTTGCTTC 59.828 33.333 0.00 0.00 36.65 3.86
1377 1819 6.696148 GCCTATTTGATTGCTCATTTCTGAAG 59.304 38.462 0.00 0.00 0.00 3.02
1385 1827 5.618056 TGCTCATTTCTGAAGTTGATGAC 57.382 39.130 5.83 2.52 0.00 3.06
1445 1887 0.183731 TCCTCATCGGAGCAGCTCTA 59.816 55.000 21.99 11.08 39.96 2.43
1496 1938 0.747283 GAGCACATCTTCAGGGGCTG 60.747 60.000 0.00 0.00 0.00 4.85
1497 1939 1.203441 AGCACATCTTCAGGGGCTGA 61.203 55.000 0.00 0.00 38.87 4.26
1539 1981 0.102300 CACGTCACCACTCACACTGA 59.898 55.000 0.00 0.00 0.00 3.41
1540 1982 0.821517 ACGTCACCACTCACACTGAA 59.178 50.000 0.00 0.00 0.00 3.02
1541 1983 1.412710 ACGTCACCACTCACACTGAAT 59.587 47.619 0.00 0.00 0.00 2.57
1553 1995 5.065218 ACTCACACTGAATAAATGGCGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1573 2015 8.394121 GCGAATCTATTTCTTCAGTTTTCAGAT 58.606 33.333 0.00 0.00 31.73 2.90
1578 2020 9.725019 TCTATTTCTTCAGTTTTCAGATAAGCA 57.275 29.630 0.00 0.00 0.00 3.91
1581 2023 8.856490 TTTCTTCAGTTTTCAGATAAGCAAAC 57.144 30.769 0.00 0.00 0.00 2.93
1590 2032 9.181805 GTTTTCAGATAAGCAAACCTTTCTAAC 57.818 33.333 0.00 0.00 34.95 2.34
1592 2034 6.539173 TCAGATAAGCAAACCTTTCTAACCA 58.461 36.000 0.00 0.00 34.95 3.67
1596 2038 2.628178 AGCAAACCTTTCTAACCAAGCC 59.372 45.455 0.00 0.00 0.00 4.35
1609 2052 6.423182 TCTAACCAAGCCTTTTATGTGCTAT 58.577 36.000 0.00 0.00 34.29 2.97
1611 2054 4.599041 ACCAAGCCTTTTATGTGCTATCA 58.401 39.130 0.00 0.00 34.29 2.15
1612 2055 5.016173 ACCAAGCCTTTTATGTGCTATCAA 58.984 37.500 0.00 0.00 34.29 2.57
1613 2056 5.480073 ACCAAGCCTTTTATGTGCTATCAAA 59.520 36.000 0.00 0.00 34.29 2.69
1614 2057 6.155049 ACCAAGCCTTTTATGTGCTATCAAAT 59.845 34.615 0.00 0.00 34.29 2.32
1615 2058 7.341769 ACCAAGCCTTTTATGTGCTATCAAATA 59.658 33.333 0.00 0.00 34.29 1.40
1829 2276 6.568869 ACATTTTGGATTCAGAAACGTTTCA 58.431 32.000 35.29 20.15 39.61 2.69
1894 2341 4.037803 GTCATGAAGAGATCTGCTCAGCTA 59.962 45.833 0.00 0.00 46.45 3.32
1916 2363 2.795329 ACAAGAAATGCGGTGATCCTT 58.205 42.857 0.00 0.00 0.00 3.36
1927 2374 4.020928 TGCGGTGATCCTTCAACTAACTTA 60.021 41.667 0.00 0.00 37.43 2.24
1960 2407 0.320508 ACTCGGGAGAAGCCGAAAAC 60.321 55.000 2.08 0.00 39.18 2.43
1993 2440 1.270893 GCTTTTCTTCCCCTGTCGTCT 60.271 52.381 0.00 0.00 0.00 4.18
2001 2448 1.991230 CCCTGTCGTCTGGGGAATT 59.009 57.895 15.33 0.00 45.44 2.17
2002 2449 0.328258 CCCTGTCGTCTGGGGAATTT 59.672 55.000 15.33 0.00 45.44 1.82
2003 2450 1.679032 CCCTGTCGTCTGGGGAATTTC 60.679 57.143 15.33 0.00 45.44 2.17
2044 2494 2.223433 CGACCCGGTAAGTAGTAGCAAG 60.223 54.545 0.00 0.00 0.00 4.01
2114 2564 4.157840 ACCTTACATTTTCTGAATTCGGGC 59.842 41.667 14.33 0.00 0.00 6.13
2117 2567 3.157087 ACATTTTCTGAATTCGGGCTGT 58.843 40.909 14.33 9.54 0.00 4.40
2132 2582 1.825474 GGCTGTAGGTCAGTTCTAGCA 59.175 52.381 0.00 0.00 45.23 3.49
2134 2584 3.491792 GGCTGTAGGTCAGTTCTAGCATC 60.492 52.174 0.00 0.00 45.23 3.91
2145 2595 0.830648 TCTAGCATCCCTTCCAACGG 59.169 55.000 0.00 0.00 0.00 4.44
2188 2638 5.701290 GCACTACTTAAGAAGAGCAAAGGAA 59.299 40.000 10.09 0.00 0.00 3.36
2315 2765 2.225068 TCTAATTGCTACCGCTCTGC 57.775 50.000 0.00 0.00 36.97 4.26
2335 2785 0.529378 AGCTCGTAGGGTTTACCGTG 59.471 55.000 4.44 0.00 46.96 4.94
2359 2809 1.941209 GCAATCGACAAGCTGAGACCA 60.941 52.381 0.00 0.00 0.00 4.02
2363 2813 0.730834 CGACAAGCTGAGACCACTCG 60.731 60.000 0.00 0.00 45.25 4.18
2368 2818 0.889306 AGCTGAGACCACTCGTTACC 59.111 55.000 0.00 0.00 45.25 2.85
2407 2857 2.688446 CCGAGTAGTCCAAGATACTGCA 59.312 50.000 0.00 0.00 32.43 4.41
2434 2884 8.321650 AGTTACTAGCGTAAGTCCAGATATAC 57.678 38.462 0.00 0.00 34.92 1.47
2462 2917 4.008330 CACTTGTCTTGGATCTTGCATCT 58.992 43.478 0.00 0.00 0.00 2.90
2498 2954 2.639347 TGCTGACCTTCTCTTGGATGAA 59.361 45.455 0.00 0.00 0.00 2.57
2509 2965 5.200483 TCTCTTGGATGAAACCACAAACTT 58.800 37.500 0.00 0.00 39.85 2.66
2584 3040 4.505808 TCACAAAAGGTACAGTTCGTTCA 58.494 39.130 0.00 0.00 0.00 3.18
2585 3041 5.120399 TCACAAAAGGTACAGTTCGTTCAT 58.880 37.500 0.00 0.00 0.00 2.57
2587 3043 6.762187 TCACAAAAGGTACAGTTCGTTCATTA 59.238 34.615 0.00 0.00 0.00 1.90
2588 3044 6.849305 CACAAAAGGTACAGTTCGTTCATTAC 59.151 38.462 0.00 0.00 0.00 1.89
2590 3046 5.479124 AAGGTACAGTTCGTTCATTACCT 57.521 39.130 0.00 0.00 40.87 3.08
2591 3047 4.817517 AGGTACAGTTCGTTCATTACCTG 58.182 43.478 0.00 0.00 38.30 4.00
2592 3048 3.370061 GGTACAGTTCGTTCATTACCTGC 59.630 47.826 0.00 0.00 0.00 4.85
2593 3049 2.423577 ACAGTTCGTTCATTACCTGCC 58.576 47.619 0.00 0.00 0.00 4.85
2594 3050 2.224426 ACAGTTCGTTCATTACCTGCCA 60.224 45.455 0.00 0.00 0.00 4.92
2595 3051 3.009723 CAGTTCGTTCATTACCTGCCAT 58.990 45.455 0.00 0.00 0.00 4.40
2596 3052 3.009723 AGTTCGTTCATTACCTGCCATG 58.990 45.455 0.00 0.00 0.00 3.66
2605 3061 0.911769 TACCTGCCATGGACTTCCTG 59.088 55.000 18.40 0.80 36.82 3.86
2606 3062 1.077212 CCTGCCATGGACTTCCTGG 60.077 63.158 18.40 6.89 37.37 4.45
2611 3067 1.001764 CATGGACTTCCTGGCAGCA 60.002 57.895 9.56 0.22 36.82 4.41
2613 3069 0.395311 ATGGACTTCCTGGCAGCATG 60.395 55.000 9.56 0.00 36.44 4.06
2632 3103 3.448093 TGCCCTCCATGTTCATGTTTA 57.552 42.857 11.13 0.00 0.00 2.01
2633 3104 3.979911 TGCCCTCCATGTTCATGTTTAT 58.020 40.909 11.13 0.00 0.00 1.40
2635 3106 5.704354 TGCCCTCCATGTTCATGTTTATAT 58.296 37.500 11.13 0.00 0.00 0.86
2636 3107 5.769662 TGCCCTCCATGTTCATGTTTATATC 59.230 40.000 11.13 0.00 0.00 1.63
2637 3108 5.769662 GCCCTCCATGTTCATGTTTATATCA 59.230 40.000 11.13 0.00 0.00 2.15
2639 3110 7.201902 GCCCTCCATGTTCATGTTTATATCAAA 60.202 37.037 11.13 0.00 0.00 2.69
2681 3152 1.513158 CAGGACGACGATGAAGCCT 59.487 57.895 0.00 0.00 0.00 4.58
2684 3155 0.173708 GGACGACGATGAAGCCTCTT 59.826 55.000 0.00 0.00 0.00 2.85
2687 3158 1.816835 ACGACGATGAAGCCTCTTGTA 59.183 47.619 0.00 0.00 0.00 2.41
2691 3162 2.826128 ACGATGAAGCCTCTTGTAGTCA 59.174 45.455 0.00 0.00 0.00 3.41
2701 3172 5.048364 AGCCTCTTGTAGTCATATCGATCAC 60.048 44.000 0.00 0.00 0.00 3.06
2726 3197 1.721664 TACGCTTCGTCATCCTCCCG 61.722 60.000 0.00 0.00 41.54 5.14
2727 3198 2.893398 GCTTCGTCATCCTCCCGT 59.107 61.111 0.00 0.00 0.00 5.28
2729 3200 1.437986 CTTCGTCATCCTCCCGTCC 59.562 63.158 0.00 0.00 0.00 4.79
2753 3224 0.541764 GAATTGGGGTGGTGAAGGCA 60.542 55.000 0.00 0.00 0.00 4.75
2759 3230 2.431683 GTGGTGAAGGCAGCCAGA 59.568 61.111 15.80 0.00 41.74 3.86
2774 3245 1.261238 CCAGAGAGCTCGGGTTCCTT 61.261 60.000 8.37 0.00 39.61 3.36
2810 3281 1.517257 CCGCTACGTTCTCCTGCTG 60.517 63.158 0.00 0.00 0.00 4.41
2828 3299 3.246112 CAGTCCACGGTTCCCCCA 61.246 66.667 0.00 0.00 0.00 4.96
2889 3360 4.142249 CGTGTTCTAGTGATGGGTGATGTA 60.142 45.833 0.00 0.00 0.00 2.29
2891 3362 4.405680 TGTTCTAGTGATGGGTGATGTAGG 59.594 45.833 0.00 0.00 0.00 3.18
2893 3364 2.270434 AGTGATGGGTGATGTAGGGT 57.730 50.000 0.00 0.00 0.00 4.34
2896 3367 1.837439 TGATGGGTGATGTAGGGTGTC 59.163 52.381 0.00 0.00 0.00 3.67
2897 3368 0.830648 ATGGGTGATGTAGGGTGTCG 59.169 55.000 0.00 0.00 0.00 4.35
2986 3459 2.025155 GAGTGCTCCATCGTCTTCCTA 58.975 52.381 0.00 0.00 0.00 2.94
3077 3550 6.243900 TGAGGATCTCTTCAGCAAGAAAATT 58.756 36.000 0.00 0.00 38.23 1.82
3138 3612 6.002062 GTCAAGTGACAACCCAAATAAGAG 57.998 41.667 6.57 0.00 44.18 2.85
3139 3613 5.763204 GTCAAGTGACAACCCAAATAAGAGA 59.237 40.000 6.57 0.00 44.18 3.10
3154 3628 5.954153 ATAAGAGATATGCCCAGAGATGG 57.046 43.478 0.00 0.00 0.00 3.51
3167 3641 2.877168 CAGAGATGGGCAACTGATAAGC 59.123 50.000 0.00 0.00 32.90 3.09
3168 3642 2.507058 AGAGATGGGCAACTGATAAGCA 59.493 45.455 0.00 0.00 0.00 3.91
3202 3676 5.760253 AGGTCATGGTAGATTTTTAGCATCG 59.240 40.000 0.00 0.00 39.13 3.84
3210 3684 9.607988 TGGTAGATTTTTAGCATCGATAAAGAA 57.392 29.630 0.00 0.00 0.00 2.52
3224 3698 9.490663 CATCGATAAAGAAAGATTTGTACAACC 57.509 33.333 8.07 3.41 0.00 3.77
3236 3710 2.047061 TGTACAACCCTGTGAAGAGCT 58.953 47.619 0.00 0.00 36.96 4.09
3238 3712 2.841442 ACAACCCTGTGAAGAGCTAC 57.159 50.000 0.00 0.00 33.30 3.58
3250 3724 1.703411 AGAGCTACTCCAGGCTGATC 58.297 55.000 17.94 0.00 39.05 2.92
3265 3739 6.938596 CCAGGCTGATCTGACAATATCATAAA 59.061 38.462 17.94 0.00 36.48 1.40
3307 3781 8.607713 TGAATTAAAGAATGGACCCTAGTACAA 58.392 33.333 0.00 0.00 41.30 2.41
3311 3785 5.359194 AGAATGGACCCTAGTACAATGTG 57.641 43.478 0.00 0.00 41.30 3.21
3313 3787 3.193395 TGGACCCTAGTACAATGTGGA 57.807 47.619 0.00 0.00 32.28 4.02
3533 4008 1.374947 CCTTTGTCTCCCTTCGCCA 59.625 57.895 0.00 0.00 0.00 5.69
3570 4045 2.284754 TCTATGCCAAACCTGTTGCA 57.715 45.000 0.00 0.00 38.23 4.08
3603 4078 1.229428 TGAGAACAAGAAAGGCGCTG 58.771 50.000 7.64 0.00 0.00 5.18
3675 4173 9.142014 TGGAAAAATTAAAACTCCAGATTGAGA 57.858 29.630 0.00 0.00 36.22 3.27
3676 4174 9.981114 GGAAAAATTAAAACTCCAGATTGAGAA 57.019 29.630 0.00 0.00 36.22 2.87
3680 4178 9.971922 AAATTAAAACTCCAGATTGAGAACAAG 57.028 29.630 0.00 0.00 39.46 3.16
3688 4186 5.942236 TCCAGATTGAGAACAAGAAGGAATG 59.058 40.000 0.00 0.00 39.46 2.67
3702 4200 1.098050 GGAATGACACAGGGCATGTC 58.902 55.000 0.00 5.30 45.58 3.06
3709 4207 0.250858 CACAGGGCATGTCTGGTTCA 60.251 55.000 17.95 0.00 41.41 3.18
3719 4218 1.144708 TGTCTGGTTCATTCCCTGCAA 59.855 47.619 0.00 0.00 0.00 4.08
3739 4238 7.287696 CCTGCAAACTTAAATTATCCCTGGTAT 59.712 37.037 0.00 0.00 0.00 2.73
3780 4279 6.206048 GCCCCACGTAGCACTTAATATTTATT 59.794 38.462 0.00 0.00 0.00 1.40
3805 4305 9.905713 TTGCTCCAAATTAGTATATGGATATCC 57.094 33.333 15.39 15.39 40.94 2.59
3823 4324 9.081204 TGGATATCCATTTGTTGATTCCATAAG 57.919 33.333 20.98 0.00 42.01 1.73
3932 4436 3.768215 TCAAATCAATGTGCCAGCCATAA 59.232 39.130 0.00 0.00 0.00 1.90
3958 4462 2.888414 CCACATCATCTTGGCATGCATA 59.112 45.455 21.36 4.71 0.00 3.14
4020 4524 6.712276 CCTAGAAACTGGGAAACTTCTGTAT 58.288 40.000 0.00 0.00 33.74 2.29
4025 4529 2.749621 CTGGGAAACTTCTGTATGGCAC 59.250 50.000 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 9.533253 GGGTATTATTCACTTTACGCTTACTAA 57.467 33.333 0.00 0.00 0.00 2.24
21 22 8.143835 GGGGTATTATTCACTTTACGCTTACTA 58.856 37.037 0.00 0.00 0.00 1.82
22 23 6.988580 GGGGTATTATTCACTTTACGCTTACT 59.011 38.462 0.00 0.00 0.00 2.24
23 24 6.988580 AGGGGTATTATTCACTTTACGCTTAC 59.011 38.462 0.00 0.00 0.00 2.34
24 25 6.987992 CAGGGGTATTATTCACTTTACGCTTA 59.012 38.462 0.00 0.00 0.00 3.09
25 26 5.820947 CAGGGGTATTATTCACTTTACGCTT 59.179 40.000 0.00 0.00 0.00 4.68
26 27 5.129815 TCAGGGGTATTATTCACTTTACGCT 59.870 40.000 0.00 0.00 0.00 5.07
27 28 5.362263 TCAGGGGTATTATTCACTTTACGC 58.638 41.667 0.00 0.00 0.00 4.42
28 29 7.046033 AGTTCAGGGGTATTATTCACTTTACG 58.954 38.462 0.00 0.00 0.00 3.18
29 30 8.803397 AAGTTCAGGGGTATTATTCACTTTAC 57.197 34.615 0.00 0.00 0.00 2.01
31 32 9.628500 GATAAGTTCAGGGGTATTATTCACTTT 57.372 33.333 0.00 0.00 0.00 2.66
32 33 8.778059 TGATAAGTTCAGGGGTATTATTCACTT 58.222 33.333 0.00 0.00 0.00 3.16
33 34 8.331931 TGATAAGTTCAGGGGTATTATTCACT 57.668 34.615 0.00 0.00 0.00 3.41
34 35 8.974060 TTGATAAGTTCAGGGGTATTATTCAC 57.026 34.615 0.00 0.00 35.27 3.18
35 36 9.983024 TTTTGATAAGTTCAGGGGTATTATTCA 57.017 29.630 0.00 0.00 35.27 2.57
59 60 9.965824 AGTTCACAATTGTAATTCGATCTTTTT 57.034 25.926 11.53 0.00 0.00 1.94
60 61 9.612620 GAGTTCACAATTGTAATTCGATCTTTT 57.387 29.630 11.53 0.00 0.00 2.27
61 62 9.003658 AGAGTTCACAATTGTAATTCGATCTTT 57.996 29.630 11.53 1.63 0.00 2.52
62 63 8.553459 AGAGTTCACAATTGTAATTCGATCTT 57.447 30.769 11.53 0.00 0.00 2.40
63 64 9.653287 TTAGAGTTCACAATTGTAATTCGATCT 57.347 29.630 11.53 8.26 0.00 2.75
67 68 9.916397 GGTATTAGAGTTCACAATTGTAATTCG 57.084 33.333 11.53 0.00 0.00 3.34
68 69 9.916397 CGGTATTAGAGTTCACAATTGTAATTC 57.084 33.333 11.53 11.63 0.00 2.17
69 70 8.889717 CCGGTATTAGAGTTCACAATTGTAATT 58.110 33.333 11.53 3.47 0.00 1.40
70 71 8.262227 TCCGGTATTAGAGTTCACAATTGTAAT 58.738 33.333 11.53 8.12 0.00 1.89
71 72 7.546667 GTCCGGTATTAGAGTTCACAATTGTAA 59.453 37.037 11.53 0.00 0.00 2.41
72 73 7.037438 GTCCGGTATTAGAGTTCACAATTGTA 58.963 38.462 11.53 0.00 0.00 2.41
73 74 5.873164 GTCCGGTATTAGAGTTCACAATTGT 59.127 40.000 4.92 4.92 0.00 2.71
74 75 5.872617 TGTCCGGTATTAGAGTTCACAATTG 59.127 40.000 3.24 3.24 0.00 2.32
75 76 6.045072 TGTCCGGTATTAGAGTTCACAATT 57.955 37.500 0.00 0.00 0.00 2.32
76 77 5.670792 TGTCCGGTATTAGAGTTCACAAT 57.329 39.130 0.00 0.00 0.00 2.71
77 78 5.471556 TTGTCCGGTATTAGAGTTCACAA 57.528 39.130 0.00 0.00 0.00 3.33
78 79 5.471556 TTTGTCCGGTATTAGAGTTCACA 57.528 39.130 0.00 0.00 0.00 3.58
79 80 7.010830 GGTTATTTGTCCGGTATTAGAGTTCAC 59.989 40.741 0.00 0.00 0.00 3.18
80 81 7.043565 GGTTATTTGTCCGGTATTAGAGTTCA 58.956 38.462 0.00 0.00 0.00 3.18
81 82 7.043565 TGGTTATTTGTCCGGTATTAGAGTTC 58.956 38.462 0.00 0.00 0.00 3.01
82 83 6.949715 TGGTTATTTGTCCGGTATTAGAGTT 58.050 36.000 0.00 0.00 0.00 3.01
83 84 6.549433 TGGTTATTTGTCCGGTATTAGAGT 57.451 37.500 0.00 0.00 0.00 3.24
84 85 8.145767 TGTATGGTTATTTGTCCGGTATTAGAG 58.854 37.037 0.00 0.00 0.00 2.43
85 86 8.020777 TGTATGGTTATTTGTCCGGTATTAGA 57.979 34.615 0.00 0.00 0.00 2.10
86 87 7.929785 ACTGTATGGTTATTTGTCCGGTATTAG 59.070 37.037 0.00 0.00 0.00 1.73
87 88 7.794041 ACTGTATGGTTATTTGTCCGGTATTA 58.206 34.615 0.00 0.00 0.00 0.98
88 89 6.655930 ACTGTATGGTTATTTGTCCGGTATT 58.344 36.000 0.00 0.00 0.00 1.89
89 90 6.243216 ACTGTATGGTTATTTGTCCGGTAT 57.757 37.500 0.00 0.00 0.00 2.73
90 91 5.680594 ACTGTATGGTTATTTGTCCGGTA 57.319 39.130 0.00 0.00 0.00 4.02
91 92 4.563140 ACTGTATGGTTATTTGTCCGGT 57.437 40.909 0.00 0.00 0.00 5.28
92 93 5.183228 AGAACTGTATGGTTATTTGTCCGG 58.817 41.667 0.00 0.00 0.00 5.14
93 94 7.039882 AGTAGAACTGTATGGTTATTTGTCCG 58.960 38.462 0.00 0.00 0.00 4.79
94 95 8.788325 AAGTAGAACTGTATGGTTATTTGTCC 57.212 34.615 0.00 0.00 0.00 4.02
95 96 8.880750 GGAAGTAGAACTGTATGGTTATTTGTC 58.119 37.037 0.00 0.00 0.00 3.18
96 97 8.380099 TGGAAGTAGAACTGTATGGTTATTTGT 58.620 33.333 0.00 0.00 0.00 2.83
97 98 8.786826 TGGAAGTAGAACTGTATGGTTATTTG 57.213 34.615 0.00 0.00 0.00 2.32
98 99 9.227777 GTTGGAAGTAGAACTGTATGGTTATTT 57.772 33.333 0.00 0.00 0.00 1.40
99 100 7.827729 GGTTGGAAGTAGAACTGTATGGTTATT 59.172 37.037 0.00 0.00 0.00 1.40
100 101 7.336396 GGTTGGAAGTAGAACTGTATGGTTAT 58.664 38.462 0.00 0.00 0.00 1.89
101 102 6.296030 GGGTTGGAAGTAGAACTGTATGGTTA 60.296 42.308 0.00 0.00 0.00 2.85
102 103 5.514310 GGGTTGGAAGTAGAACTGTATGGTT 60.514 44.000 0.00 0.00 0.00 3.67
103 104 4.019591 GGGTTGGAAGTAGAACTGTATGGT 60.020 45.833 0.00 0.00 0.00 3.55
104 105 4.225267 AGGGTTGGAAGTAGAACTGTATGG 59.775 45.833 0.00 0.00 0.00 2.74
105 106 5.178797 CAGGGTTGGAAGTAGAACTGTATG 58.821 45.833 0.00 0.00 0.00 2.39
106 107 5.422214 CAGGGTTGGAAGTAGAACTGTAT 57.578 43.478 0.00 0.00 0.00 2.29
107 108 4.884668 CAGGGTTGGAAGTAGAACTGTA 57.115 45.455 0.00 0.00 0.00 2.74
108 109 3.771577 CAGGGTTGGAAGTAGAACTGT 57.228 47.619 0.00 0.00 0.00 3.55
124 125 2.359975 GGTTTGAGCCGTCCAGGG 60.360 66.667 0.00 0.00 41.48 4.45
125 126 2.359975 GGGTTTGAGCCGTCCAGG 60.360 66.667 0.00 0.00 44.97 4.45
132 133 2.421220 TCAAAACCGGGTTTGAGCC 58.579 52.632 37.71 0.00 41.45 4.70
136 137 0.390860 TGGCATCAAAACCGGGTTTG 59.609 50.000 34.56 34.56 35.80 2.93
137 138 1.347062 ATGGCATCAAAACCGGGTTT 58.653 45.000 19.22 19.22 37.34 3.27
138 139 1.822371 GTATGGCATCAAAACCGGGTT 59.178 47.619 6.59 6.59 0.00 4.11
139 140 1.470051 GTATGGCATCAAAACCGGGT 58.530 50.000 6.32 0.00 0.00 5.28
140 141 0.380378 CGTATGGCATCAAAACCGGG 59.620 55.000 6.32 0.00 0.00 5.73
141 142 0.380378 CCGTATGGCATCAAAACCGG 59.620 55.000 1.65 0.00 0.00 5.28
142 143 1.063469 GTCCGTATGGCATCAAAACCG 59.937 52.381 1.65 0.00 34.14 4.44
143 144 1.063469 CGTCCGTATGGCATCAAAACC 59.937 52.381 1.65 0.00 34.14 3.27
144 145 2.004017 TCGTCCGTATGGCATCAAAAC 58.996 47.619 1.65 0.00 34.14 2.43
145 146 2.004017 GTCGTCCGTATGGCATCAAAA 58.996 47.619 1.65 0.00 34.14 2.44
146 147 1.066787 TGTCGTCCGTATGGCATCAAA 60.067 47.619 1.65 0.00 34.14 2.69
147 148 0.533032 TGTCGTCCGTATGGCATCAA 59.467 50.000 1.65 0.00 34.14 2.57
148 149 0.750249 ATGTCGTCCGTATGGCATCA 59.250 50.000 1.65 0.00 31.06 3.07
149 150 1.139989 CATGTCGTCCGTATGGCATC 58.860 55.000 1.65 0.00 34.68 3.91
150 151 0.464036 ACATGTCGTCCGTATGGCAT 59.536 50.000 4.88 4.88 37.43 4.40
151 152 0.179121 GACATGTCGTCCGTATGGCA 60.179 55.000 10.69 0.00 38.85 4.92
152 153 0.179121 TGACATGTCGTCCGTATGGC 60.179 55.000 20.54 7.99 44.71 4.40
153 154 2.034685 AGATGACATGTCGTCCGTATGG 59.965 50.000 34.22 0.00 44.56 2.74
154 155 3.355626 AGATGACATGTCGTCCGTATG 57.644 47.619 34.22 0.00 44.56 2.39
155 156 3.490933 CCAAGATGACATGTCGTCCGTAT 60.491 47.826 34.22 19.43 44.56 3.06
156 157 2.159296 CCAAGATGACATGTCGTCCGTA 60.159 50.000 34.22 13.20 44.56 4.02
157 158 1.404181 CCAAGATGACATGTCGTCCGT 60.404 52.381 34.22 23.96 44.56 4.69
158 159 1.280982 CCAAGATGACATGTCGTCCG 58.719 55.000 34.22 27.06 44.56 4.79
159 160 2.002586 CACCAAGATGACATGTCGTCC 58.997 52.381 34.22 21.19 44.56 4.79
160 161 2.002586 CCACCAAGATGACATGTCGTC 58.997 52.381 32.11 32.11 45.61 4.20
161 162 1.339055 CCCACCAAGATGACATGTCGT 60.339 52.381 20.50 20.50 0.00 4.34
162 163 1.372582 CCCACCAAGATGACATGTCG 58.627 55.000 20.54 7.89 0.00 4.35
163 164 1.004745 ACCCCACCAAGATGACATGTC 59.995 52.381 19.27 19.27 0.00 3.06
164 165 1.004745 GACCCCACCAAGATGACATGT 59.995 52.381 0.00 0.00 0.00 3.21
165 166 1.683011 GGACCCCACCAAGATGACATG 60.683 57.143 0.00 0.00 0.00 3.21
166 167 0.625849 GGACCCCACCAAGATGACAT 59.374 55.000 0.00 0.00 0.00 3.06
167 168 0.770166 TGGACCCCACCAAGATGACA 60.770 55.000 0.00 0.00 36.96 3.58
168 169 2.074967 TGGACCCCACCAAGATGAC 58.925 57.895 0.00 0.00 36.96 3.06
169 170 4.679500 TGGACCCCACCAAGATGA 57.321 55.556 0.00 0.00 36.96 2.92
178 179 2.156920 GGGTAAGTTGTGGACCCCA 58.843 57.895 0.54 0.00 46.24 4.96
181 182 0.683412 ACTCGGGTAAGTTGTGGACC 59.317 55.000 0.00 0.00 0.00 4.46
182 183 1.342174 TGACTCGGGTAAGTTGTGGAC 59.658 52.381 0.00 0.00 0.00 4.02
183 184 1.616865 CTGACTCGGGTAAGTTGTGGA 59.383 52.381 0.00 0.00 0.00 4.02
184 185 1.939838 GCTGACTCGGGTAAGTTGTGG 60.940 57.143 0.62 0.00 0.00 4.17
185 186 1.429463 GCTGACTCGGGTAAGTTGTG 58.571 55.000 0.62 0.00 0.00 3.33
186 187 0.320697 GGCTGACTCGGGTAAGTTGT 59.679 55.000 0.62 0.00 0.00 3.32
187 188 0.320374 TGGCTGACTCGGGTAAGTTG 59.680 55.000 0.62 0.00 0.00 3.16
188 189 1.053424 TTGGCTGACTCGGGTAAGTT 58.947 50.000 0.62 0.00 0.00 2.66
189 190 0.320697 GTTGGCTGACTCGGGTAAGT 59.679 55.000 0.62 0.00 0.00 2.24
190 191 0.320374 TGTTGGCTGACTCGGGTAAG 59.680 55.000 0.00 0.00 0.00 2.34
191 192 0.034337 GTGTTGGCTGACTCGGGTAA 59.966 55.000 0.00 0.00 0.00 2.85
192 193 1.116536 TGTGTTGGCTGACTCGGGTA 61.117 55.000 0.00 0.00 0.00 3.69
193 194 2.426023 GTGTTGGCTGACTCGGGT 59.574 61.111 0.00 0.00 0.00 5.28
194 195 1.961277 GTGTGTTGGCTGACTCGGG 60.961 63.158 0.00 0.00 0.00 5.14
195 196 1.224069 CTGTGTGTTGGCTGACTCGG 61.224 60.000 0.00 0.00 0.00 4.63
196 197 0.249447 TCTGTGTGTTGGCTGACTCG 60.249 55.000 0.00 0.00 0.00 4.18
197 198 2.072298 GATCTGTGTGTTGGCTGACTC 58.928 52.381 0.00 0.00 0.00 3.36
198 199 1.417517 TGATCTGTGTGTTGGCTGACT 59.582 47.619 0.00 0.00 0.00 3.41
199 200 1.532868 GTGATCTGTGTGTTGGCTGAC 59.467 52.381 0.00 0.00 0.00 3.51
200 201 1.140652 TGTGATCTGTGTGTTGGCTGA 59.859 47.619 0.00 0.00 0.00 4.26
201 202 1.265095 GTGTGATCTGTGTGTTGGCTG 59.735 52.381 0.00 0.00 0.00 4.85
202 203 1.597742 GTGTGATCTGTGTGTTGGCT 58.402 50.000 0.00 0.00 0.00 4.75
203 204 0.593128 GGTGTGATCTGTGTGTTGGC 59.407 55.000 0.00 0.00 0.00 4.52
204 205 2.146342 GAGGTGTGATCTGTGTGTTGG 58.854 52.381 0.00 0.00 0.00 3.77
205 206 2.146342 GGAGGTGTGATCTGTGTGTTG 58.854 52.381 0.00 0.00 0.00 3.33
206 207 1.072331 GGGAGGTGTGATCTGTGTGTT 59.928 52.381 0.00 0.00 0.00 3.32
207 208 0.687354 GGGAGGTGTGATCTGTGTGT 59.313 55.000 0.00 0.00 0.00 3.72
208 209 0.686789 TGGGAGGTGTGATCTGTGTG 59.313 55.000 0.00 0.00 0.00 3.82
209 210 0.687354 GTGGGAGGTGTGATCTGTGT 59.313 55.000 0.00 0.00 0.00 3.72
210 211 0.036010 GGTGGGAGGTGTGATCTGTG 60.036 60.000 0.00 0.00 0.00 3.66
211 212 0.473694 TGGTGGGAGGTGTGATCTGT 60.474 55.000 0.00 0.00 0.00 3.41
212 213 0.692476 TTGGTGGGAGGTGTGATCTG 59.308 55.000 0.00 0.00 0.00 2.90
213 214 1.352352 CTTTGGTGGGAGGTGTGATCT 59.648 52.381 0.00 0.00 0.00 2.75
214 215 1.826385 CTTTGGTGGGAGGTGTGATC 58.174 55.000 0.00 0.00 0.00 2.92
215 216 0.251341 GCTTTGGTGGGAGGTGTGAT 60.251 55.000 0.00 0.00 0.00 3.06
216 217 1.150536 GCTTTGGTGGGAGGTGTGA 59.849 57.895 0.00 0.00 0.00 3.58
217 218 1.903404 GGCTTTGGTGGGAGGTGTG 60.903 63.158 0.00 0.00 0.00 3.82
218 219 2.069165 GAGGCTTTGGTGGGAGGTGT 62.069 60.000 0.00 0.00 0.00 4.16
219 220 1.303643 GAGGCTTTGGTGGGAGGTG 60.304 63.158 0.00 0.00 0.00 4.00
220 221 1.774217 TGAGGCTTTGGTGGGAGGT 60.774 57.895 0.00 0.00 0.00 3.85
221 222 1.303643 GTGAGGCTTTGGTGGGAGG 60.304 63.158 0.00 0.00 0.00 4.30
222 223 1.303643 GGTGAGGCTTTGGTGGGAG 60.304 63.158 0.00 0.00 0.00 4.30
223 224 1.774217 AGGTGAGGCTTTGGTGGGA 60.774 57.895 0.00 0.00 0.00 4.37
224 225 1.303643 GAGGTGAGGCTTTGGTGGG 60.304 63.158 0.00 0.00 0.00 4.61
225 226 1.303643 GGAGGTGAGGCTTTGGTGG 60.304 63.158 0.00 0.00 0.00 4.61
226 227 0.111253 AAGGAGGTGAGGCTTTGGTG 59.889 55.000 0.00 0.00 0.00 4.17
227 228 0.111253 CAAGGAGGTGAGGCTTTGGT 59.889 55.000 0.00 0.00 0.00 3.67
228 229 1.246737 GCAAGGAGGTGAGGCTTTGG 61.247 60.000 0.00 0.00 0.00 3.28
229 230 0.251077 AGCAAGGAGGTGAGGCTTTG 60.251 55.000 0.00 0.00 0.00 2.77
230 231 0.037447 GAGCAAGGAGGTGAGGCTTT 59.963 55.000 0.00 0.00 34.44 3.51
231 232 1.130054 TGAGCAAGGAGGTGAGGCTT 61.130 55.000 0.00 0.00 34.44 4.35
232 233 1.130054 TTGAGCAAGGAGGTGAGGCT 61.130 55.000 0.00 0.00 37.56 4.58
233 234 0.250901 TTTGAGCAAGGAGGTGAGGC 60.251 55.000 0.00 0.00 0.00 4.70
234 235 2.276732 TTTTGAGCAAGGAGGTGAGG 57.723 50.000 0.00 0.00 0.00 3.86
257 258 1.543429 CGGTGAGAGGTGAGGCTTTTT 60.543 52.381 0.00 0.00 0.00 1.94
258 259 0.035458 CGGTGAGAGGTGAGGCTTTT 59.965 55.000 0.00 0.00 0.00 2.27
259 260 1.674057 CGGTGAGAGGTGAGGCTTT 59.326 57.895 0.00 0.00 0.00 3.51
260 261 2.948720 GCGGTGAGAGGTGAGGCTT 61.949 63.158 0.00 0.00 0.00 4.35
261 262 3.386237 GCGGTGAGAGGTGAGGCT 61.386 66.667 0.00 0.00 0.00 4.58
262 263 4.459089 GGCGGTGAGAGGTGAGGC 62.459 72.222 0.00 0.00 0.00 4.70
263 264 2.681778 AGGCGGTGAGAGGTGAGG 60.682 66.667 0.00 0.00 0.00 3.86
264 265 2.888863 GAGGCGGTGAGAGGTGAG 59.111 66.667 0.00 0.00 0.00 3.51
265 266 3.062466 CGAGGCGGTGAGAGGTGA 61.062 66.667 0.00 0.00 0.00 4.02
266 267 4.803426 GCGAGGCGGTGAGAGGTG 62.803 72.222 0.00 0.00 0.00 4.00
268 269 4.200283 GAGCGAGGCGGTGAGAGG 62.200 72.222 0.00 0.00 37.83 3.69
269 270 4.200283 GGAGCGAGGCGGTGAGAG 62.200 72.222 0.00 0.00 37.83 3.20
277 278 2.442272 TAGGTGAGGGAGCGAGGC 60.442 66.667 0.00 0.00 0.00 4.70
278 279 1.076632 AGTAGGTGAGGGAGCGAGG 60.077 63.158 0.00 0.00 0.00 4.63
279 280 0.681564 ACAGTAGGTGAGGGAGCGAG 60.682 60.000 0.00 0.00 0.00 5.03
280 281 0.680280 GACAGTAGGTGAGGGAGCGA 60.680 60.000 0.00 0.00 0.00 4.93
281 282 1.810532 GACAGTAGGTGAGGGAGCG 59.189 63.158 0.00 0.00 0.00 5.03
282 283 0.680280 TCGACAGTAGGTGAGGGAGC 60.680 60.000 0.00 0.00 0.00 4.70
283 284 1.678627 CATCGACAGTAGGTGAGGGAG 59.321 57.143 0.00 0.00 0.00 4.30
284 285 1.763968 CATCGACAGTAGGTGAGGGA 58.236 55.000 0.00 0.00 0.00 4.20
285 286 0.103208 GCATCGACAGTAGGTGAGGG 59.897 60.000 0.00 0.00 0.00 4.30
286 287 0.103208 GGCATCGACAGTAGGTGAGG 59.897 60.000 0.00 0.00 0.00 3.86
287 288 0.103208 GGGCATCGACAGTAGGTGAG 59.897 60.000 0.00 0.00 0.00 3.51
288 289 1.327690 GGGGCATCGACAGTAGGTGA 61.328 60.000 0.00 0.00 0.00 4.02
289 290 1.144057 GGGGCATCGACAGTAGGTG 59.856 63.158 0.00 0.00 0.00 4.00
290 291 2.064581 GGGGGCATCGACAGTAGGT 61.065 63.158 0.00 0.00 0.00 3.08
291 292 1.749334 GAGGGGGCATCGACAGTAGG 61.749 65.000 0.00 0.00 0.00 3.18
292 293 1.742768 GAGGGGGCATCGACAGTAG 59.257 63.158 0.00 0.00 0.00 2.57
293 294 1.760875 GGAGGGGGCATCGACAGTA 60.761 63.158 0.00 0.00 0.00 2.74
294 295 3.083997 GGAGGGGGCATCGACAGT 61.084 66.667 0.00 0.00 0.00 3.55
295 296 3.083349 TGGAGGGGGCATCGACAG 61.083 66.667 0.00 0.00 0.00 3.51
296 297 2.523740 TAGTGGAGGGGGCATCGACA 62.524 60.000 0.00 0.00 0.00 4.35
297 298 1.122019 ATAGTGGAGGGGGCATCGAC 61.122 60.000 0.00 0.00 0.00 4.20
298 299 1.121407 CATAGTGGAGGGGGCATCGA 61.121 60.000 0.00 0.00 0.00 3.59
299 300 1.121407 TCATAGTGGAGGGGGCATCG 61.121 60.000 0.00 0.00 0.00 3.84
300 301 1.280421 GATCATAGTGGAGGGGGCATC 59.720 57.143 0.00 0.00 0.00 3.91
301 302 1.366319 GATCATAGTGGAGGGGGCAT 58.634 55.000 0.00 0.00 0.00 4.40
302 303 0.768221 GGATCATAGTGGAGGGGGCA 60.768 60.000 0.00 0.00 0.00 5.36
303 304 1.492993 GGGATCATAGTGGAGGGGGC 61.493 65.000 0.00 0.00 0.00 5.80
304 305 0.842467 GGGGATCATAGTGGAGGGGG 60.842 65.000 0.00 0.00 0.00 5.40
305 306 1.194781 CGGGGATCATAGTGGAGGGG 61.195 65.000 0.00 0.00 0.00 4.79
306 307 1.194781 CCGGGGATCATAGTGGAGGG 61.195 65.000 0.00 0.00 0.00 4.30
307 308 0.471971 ACCGGGGATCATAGTGGAGG 60.472 60.000 6.32 0.00 0.00 4.30
308 309 1.424638 AACCGGGGATCATAGTGGAG 58.575 55.000 6.32 0.00 0.00 3.86
309 310 1.488812 CAAACCGGGGATCATAGTGGA 59.511 52.381 6.32 0.00 0.00 4.02
310 311 1.488812 TCAAACCGGGGATCATAGTGG 59.511 52.381 6.32 0.00 0.00 4.00
311 312 3.403038 GATCAAACCGGGGATCATAGTG 58.597 50.000 21.23 1.99 39.71 2.74
312 313 2.372172 GGATCAAACCGGGGATCATAGT 59.628 50.000 24.97 0.00 41.30 2.12
313 314 2.290323 GGGATCAAACCGGGGATCATAG 60.290 54.545 24.97 2.09 41.30 2.23
314 315 1.702957 GGGATCAAACCGGGGATCATA 59.297 52.381 24.97 0.12 41.30 2.15
315 316 0.478507 GGGATCAAACCGGGGATCAT 59.521 55.000 24.97 5.38 41.30 2.45
316 317 0.623324 AGGGATCAAACCGGGGATCA 60.623 55.000 24.97 0.94 41.30 2.92
317 318 0.179018 CAGGGATCAAACCGGGGATC 60.179 60.000 19.14 19.14 39.31 3.36
318 319 0.623324 TCAGGGATCAAACCGGGGAT 60.623 55.000 6.32 5.74 0.00 3.85
319 320 1.229690 TCAGGGATCAAACCGGGGA 60.230 57.895 6.32 0.00 0.00 4.81
320 321 1.224592 CTCAGGGATCAAACCGGGG 59.775 63.158 6.32 0.00 0.00 5.73
321 322 0.618458 TTCTCAGGGATCAAACCGGG 59.382 55.000 6.32 0.00 0.00 5.73
322 323 1.555075 TCTTCTCAGGGATCAAACCGG 59.445 52.381 0.00 0.00 0.00 5.28
323 324 2.234908 ACTCTTCTCAGGGATCAAACCG 59.765 50.000 0.00 0.00 0.00 4.44
324 325 3.990959 ACTCTTCTCAGGGATCAAACC 57.009 47.619 0.00 0.00 0.00 3.27
325 326 5.407407 TGTACTCTTCTCAGGGATCAAAC 57.593 43.478 0.00 0.00 0.00 2.93
326 327 5.306937 TGTTGTACTCTTCTCAGGGATCAAA 59.693 40.000 0.00 0.00 0.00 2.69
327 328 4.838423 TGTTGTACTCTTCTCAGGGATCAA 59.162 41.667 0.00 0.00 0.00 2.57
328 329 4.416516 TGTTGTACTCTTCTCAGGGATCA 58.583 43.478 0.00 0.00 0.00 2.92
329 330 5.407407 TTGTTGTACTCTTCTCAGGGATC 57.593 43.478 0.00 0.00 0.00 3.36
330 331 6.670027 AGTATTGTTGTACTCTTCTCAGGGAT 59.330 38.462 0.00 0.00 28.99 3.85
331 332 6.017192 AGTATTGTTGTACTCTTCTCAGGGA 58.983 40.000 0.00 0.00 28.99 4.20
332 333 6.287589 AGTATTGTTGTACTCTTCTCAGGG 57.712 41.667 0.00 0.00 28.99 4.45
338 339 9.530633 CCCAACTATAGTATTGTTGTACTCTTC 57.469 37.037 25.63 0.00 42.01 2.87
339 340 9.263446 TCCCAACTATAGTATTGTTGTACTCTT 57.737 33.333 25.63 0.00 42.01 2.85
340 341 8.834004 TCCCAACTATAGTATTGTTGTACTCT 57.166 34.615 25.63 0.00 42.01 3.24
341 342 8.693625 ACTCCCAACTATAGTATTGTTGTACTC 58.306 37.037 25.63 0.00 42.01 2.59
342 343 8.605325 ACTCCCAACTATAGTATTGTTGTACT 57.395 34.615 25.63 10.43 42.01 2.73
351 352 9.914834 TGCAAATTTTACTCCCAACTATAGTAT 57.085 29.630 5.65 0.00 0.00 2.12
352 353 9.914834 ATGCAAATTTTACTCCCAACTATAGTA 57.085 29.630 5.65 0.00 0.00 1.82
353 354 8.823220 ATGCAAATTTTACTCCCAACTATAGT 57.177 30.769 0.00 0.00 0.00 2.12
354 355 9.125026 AGATGCAAATTTTACTCCCAACTATAG 57.875 33.333 0.00 0.00 0.00 1.31
355 356 8.902806 CAGATGCAAATTTTACTCCCAACTATA 58.097 33.333 0.00 0.00 0.00 1.31
356 357 7.615365 TCAGATGCAAATTTTACTCCCAACTAT 59.385 33.333 0.00 0.00 0.00 2.12
357 358 6.945435 TCAGATGCAAATTTTACTCCCAACTA 59.055 34.615 0.00 0.00 0.00 2.24
358 359 5.774690 TCAGATGCAAATTTTACTCCCAACT 59.225 36.000 0.00 0.00 0.00 3.16
359 360 6.024552 TCAGATGCAAATTTTACTCCCAAC 57.975 37.500 0.00 0.00 0.00 3.77
360 361 6.662865 TTCAGATGCAAATTTTACTCCCAA 57.337 33.333 0.00 0.00 0.00 4.12
361 362 6.662865 TTTCAGATGCAAATTTTACTCCCA 57.337 33.333 0.00 0.00 0.00 4.37
362 363 7.961325 TTTTTCAGATGCAAATTTTACTCCC 57.039 32.000 0.00 0.00 0.00 4.30
383 384 6.537301 TGTTGACGAGTCTTGACTACATTTTT 59.463 34.615 3.00 0.00 0.00 1.94
384 385 6.046593 TGTTGACGAGTCTTGACTACATTTT 58.953 36.000 3.00 0.00 0.00 1.82
385 386 5.597806 TGTTGACGAGTCTTGACTACATTT 58.402 37.500 3.00 0.00 0.00 2.32
386 387 5.196341 TGTTGACGAGTCTTGACTACATT 57.804 39.130 3.00 0.00 0.00 2.71
387 388 4.848562 TGTTGACGAGTCTTGACTACAT 57.151 40.909 3.00 0.00 0.00 2.29
388 389 4.277423 TCATGTTGACGAGTCTTGACTACA 59.723 41.667 3.00 8.66 0.00 2.74
389 390 4.795268 TCATGTTGACGAGTCTTGACTAC 58.205 43.478 3.00 0.00 0.00 2.73
390 391 4.760204 TCTCATGTTGACGAGTCTTGACTA 59.240 41.667 3.00 0.00 0.00 2.59
391 392 3.570125 TCTCATGTTGACGAGTCTTGACT 59.430 43.478 2.59 2.59 0.00 3.41
392 393 3.902150 TCTCATGTTGACGAGTCTTGAC 58.098 45.455 4.78 0.00 0.00 3.18
393 394 4.460731 AGATCTCATGTTGACGAGTCTTGA 59.539 41.667 4.78 2.71 0.00 3.02
394 395 4.742417 AGATCTCATGTTGACGAGTCTTG 58.258 43.478 4.78 0.00 0.00 3.02
395 396 6.516739 TTAGATCTCATGTTGACGAGTCTT 57.483 37.500 0.00 0.00 0.00 3.01
396 397 6.707440 ATTAGATCTCATGTTGACGAGTCT 57.293 37.500 0.00 0.00 0.00 3.24
397 398 7.763172 AAATTAGATCTCATGTTGACGAGTC 57.237 36.000 0.00 0.00 0.00 3.36
398 399 7.819415 TCAAAATTAGATCTCATGTTGACGAGT 59.181 33.333 15.64 0.00 0.00 4.18
399 400 8.189709 TCAAAATTAGATCTCATGTTGACGAG 57.810 34.615 15.64 0.00 0.00 4.18
400 401 8.546597 TTCAAAATTAGATCTCATGTTGACGA 57.453 30.769 18.27 6.18 0.00 4.20
401 402 8.659491 TCTTCAAAATTAGATCTCATGTTGACG 58.341 33.333 18.27 16.76 0.00 4.35
406 407 9.730705 TGAGTTCTTCAAAATTAGATCTCATGT 57.269 29.630 0.00 0.00 40.04 3.21
409 410 9.559732 TGTTGAGTTCTTCAAAATTAGATCTCA 57.440 29.630 0.00 10.63 46.85 3.27
414 415 9.613428 TCTCTTGTTGAGTTCTTCAAAATTAGA 57.387 29.630 0.00 0.00 46.85 2.10
417 418 7.976175 GGTTCTCTTGTTGAGTTCTTCAAAATT 59.024 33.333 0.00 0.00 46.85 1.82
418 419 7.122650 TGGTTCTCTTGTTGAGTTCTTCAAAAT 59.877 33.333 0.00 0.00 46.85 1.82
419 420 6.432783 TGGTTCTCTTGTTGAGTTCTTCAAAA 59.567 34.615 0.00 0.00 46.85 2.44
420 421 5.943416 TGGTTCTCTTGTTGAGTTCTTCAAA 59.057 36.000 0.00 0.00 46.85 2.69
421 422 5.354234 GTGGTTCTCTTGTTGAGTTCTTCAA 59.646 40.000 0.00 0.00 43.40 2.69
422 423 4.876107 GTGGTTCTCTTGTTGAGTTCTTCA 59.124 41.667 0.00 0.00 43.13 3.02
423 424 4.876107 TGTGGTTCTCTTGTTGAGTTCTTC 59.124 41.667 0.00 0.00 43.13 2.87
424 425 4.843728 TGTGGTTCTCTTGTTGAGTTCTT 58.156 39.130 0.00 0.00 43.13 2.52
425 426 4.487714 TGTGGTTCTCTTGTTGAGTTCT 57.512 40.909 0.00 0.00 43.13 3.01
426 427 4.201920 GGTTGTGGTTCTCTTGTTGAGTTC 60.202 45.833 0.00 0.00 43.13 3.01
427 428 3.694566 GGTTGTGGTTCTCTTGTTGAGTT 59.305 43.478 0.00 0.00 43.13 3.01
428 429 3.279434 GGTTGTGGTTCTCTTGTTGAGT 58.721 45.455 0.00 0.00 43.13 3.41
429 430 2.287915 CGGTTGTGGTTCTCTTGTTGAG 59.712 50.000 0.00 0.00 43.96 3.02
430 431 2.285083 CGGTTGTGGTTCTCTTGTTGA 58.715 47.619 0.00 0.00 0.00 3.18
431 432 2.014128 ACGGTTGTGGTTCTCTTGTTG 58.986 47.619 0.00 0.00 0.00 3.33
432 433 2.014128 CACGGTTGTGGTTCTCTTGTT 58.986 47.619 0.00 0.00 42.59 2.83
433 434 1.208535 TCACGGTTGTGGTTCTCTTGT 59.791 47.619 0.00 0.00 46.42 3.16
434 435 1.948104 TCACGGTTGTGGTTCTCTTG 58.052 50.000 0.00 0.00 46.42 3.02
435 436 2.702592 TTCACGGTTGTGGTTCTCTT 57.297 45.000 0.00 0.00 46.42 2.85
436 437 2.681344 GTTTTCACGGTTGTGGTTCTCT 59.319 45.455 0.00 0.00 46.42 3.10
437 438 2.538132 CGTTTTCACGGTTGTGGTTCTC 60.538 50.000 0.00 0.00 46.42 2.87
438 439 1.399089 CGTTTTCACGGTTGTGGTTCT 59.601 47.619 0.00 0.00 46.42 3.01
439 440 1.817609 CGTTTTCACGGTTGTGGTTC 58.182 50.000 0.00 0.00 46.42 3.62
450 451 9.618410 CAAGTTCAAATTACAAATCGTTTTCAC 57.382 29.630 0.00 0.00 0.00 3.18
451 452 9.574458 TCAAGTTCAAATTACAAATCGTTTTCA 57.426 25.926 0.00 0.00 0.00 2.69
453 454 9.796120 TCTCAAGTTCAAATTACAAATCGTTTT 57.204 25.926 0.00 0.00 0.00 2.43
454 455 9.450807 CTCTCAAGTTCAAATTACAAATCGTTT 57.549 29.630 0.00 0.00 0.00 3.60
455 456 8.836413 TCTCTCAAGTTCAAATTACAAATCGTT 58.164 29.630 0.00 0.00 0.00 3.85
456 457 8.378172 TCTCTCAAGTTCAAATTACAAATCGT 57.622 30.769 0.00 0.00 0.00 3.73
457 458 9.270576 CATCTCTCAAGTTCAAATTACAAATCG 57.729 33.333 0.00 0.00 0.00 3.34
460 461 9.950680 GAACATCTCTCAAGTTCAAATTACAAA 57.049 29.630 0.00 0.00 40.89 2.83
461 462 9.342308 AGAACATCTCTCAAGTTCAAATTACAA 57.658 29.630 0.00 0.00 43.00 2.41
462 463 8.908786 AGAACATCTCTCAAGTTCAAATTACA 57.091 30.769 0.00 0.00 43.00 2.41
466 467 9.566432 ACTTAAGAACATCTCTCAAGTTCAAAT 57.434 29.630 10.09 0.00 43.00 2.32
467 468 8.830580 CACTTAAGAACATCTCTCAAGTTCAAA 58.169 33.333 10.09 0.00 43.00 2.69
468 469 8.204160 TCACTTAAGAACATCTCTCAAGTTCAA 58.796 33.333 10.09 0.00 43.00 2.69
469 470 7.726216 TCACTTAAGAACATCTCTCAAGTTCA 58.274 34.615 10.09 0.00 43.00 3.18
470 471 8.594881 TTCACTTAAGAACATCTCTCAAGTTC 57.405 34.615 10.09 0.00 41.37 3.01
471 472 8.997323 CATTCACTTAAGAACATCTCTCAAGTT 58.003 33.333 10.09 0.00 31.02 2.66
472 473 8.370940 TCATTCACTTAAGAACATCTCTCAAGT 58.629 33.333 10.09 0.00 31.02 3.16
473 474 8.768957 TCATTCACTTAAGAACATCTCTCAAG 57.231 34.615 10.09 0.00 31.02 3.02
474 475 9.559732 TTTCATTCACTTAAGAACATCTCTCAA 57.440 29.630 10.09 0.00 31.02 3.02
475 476 9.730705 ATTTCATTCACTTAAGAACATCTCTCA 57.269 29.630 10.09 0.00 31.02 3.27
477 478 9.956640 AGATTTCATTCACTTAAGAACATCTCT 57.043 29.630 10.09 0.00 35.13 3.10
497 498 9.788960 GGATTGGTATGTGTTTTTCTAGATTTC 57.211 33.333 0.00 0.00 0.00 2.17
498 499 9.533831 AGGATTGGTATGTGTTTTTCTAGATTT 57.466 29.630 0.00 0.00 0.00 2.17
499 500 9.178758 GAGGATTGGTATGTGTTTTTCTAGATT 57.821 33.333 0.00 0.00 0.00 2.40
500 501 8.552296 AGAGGATTGGTATGTGTTTTTCTAGAT 58.448 33.333 0.00 0.00 0.00 1.98
501 502 7.918076 AGAGGATTGGTATGTGTTTTTCTAGA 58.082 34.615 0.00 0.00 0.00 2.43
502 503 9.838339 ATAGAGGATTGGTATGTGTTTTTCTAG 57.162 33.333 0.00 0.00 0.00 2.43
504 505 9.178758 GAATAGAGGATTGGTATGTGTTTTTCT 57.821 33.333 0.00 0.00 0.00 2.52
505 506 8.406297 GGAATAGAGGATTGGTATGTGTTTTTC 58.594 37.037 0.00 0.00 0.00 2.29
506 507 7.342026 GGGAATAGAGGATTGGTATGTGTTTTT 59.658 37.037 0.00 0.00 0.00 1.94
507 508 6.833933 GGGAATAGAGGATTGGTATGTGTTTT 59.166 38.462 0.00 0.00 0.00 2.43
508 509 6.160459 AGGGAATAGAGGATTGGTATGTGTTT 59.840 38.462 0.00 0.00 0.00 2.83
509 510 5.672194 AGGGAATAGAGGATTGGTATGTGTT 59.328 40.000 0.00 0.00 0.00 3.32
510 511 5.227593 AGGGAATAGAGGATTGGTATGTGT 58.772 41.667 0.00 0.00 0.00 3.72
511 512 5.832539 AGGGAATAGAGGATTGGTATGTG 57.167 43.478 0.00 0.00 0.00 3.21
512 513 5.310857 GGAAGGGAATAGAGGATTGGTATGT 59.689 44.000 0.00 0.00 0.00 2.29
513 514 5.569630 CGGAAGGGAATAGAGGATTGGTATG 60.570 48.000 0.00 0.00 0.00 2.39
514 515 4.532521 CGGAAGGGAATAGAGGATTGGTAT 59.467 45.833 0.00 0.00 0.00 2.73
515 516 3.901844 CGGAAGGGAATAGAGGATTGGTA 59.098 47.826 0.00 0.00 0.00 3.25
516 517 2.706190 CGGAAGGGAATAGAGGATTGGT 59.294 50.000 0.00 0.00 0.00 3.67
517 518 2.706190 ACGGAAGGGAATAGAGGATTGG 59.294 50.000 0.00 0.00 0.00 3.16
518 519 4.021016 CCTACGGAAGGGAATAGAGGATTG 60.021 50.000 0.00 0.00 42.32 2.67
519 520 4.161102 CCTACGGAAGGGAATAGAGGATT 58.839 47.826 0.00 0.00 42.32 3.01
520 521 3.780626 CCTACGGAAGGGAATAGAGGAT 58.219 50.000 0.00 0.00 42.32 3.24
521 522 3.240310 CCTACGGAAGGGAATAGAGGA 57.760 52.381 0.00 0.00 42.32 3.71
532 533 1.135333 GAAGAGCCTCACCTACGGAAG 59.865 57.143 0.00 0.00 0.00 3.46
533 534 1.183549 GAAGAGCCTCACCTACGGAA 58.816 55.000 0.00 0.00 0.00 4.30
534 535 0.331954 AGAAGAGCCTCACCTACGGA 59.668 55.000 0.00 0.00 0.00 4.69
535 536 0.741915 GAGAAGAGCCTCACCTACGG 59.258 60.000 0.00 0.00 33.50 4.02
536 537 1.673920 GAGAGAAGAGCCTCACCTACG 59.326 57.143 0.00 0.00 35.68 3.51
537 538 2.028876 GGAGAGAAGAGCCTCACCTAC 58.971 57.143 0.00 0.00 39.73 3.18
538 539 1.063567 GGGAGAGAAGAGCCTCACCTA 60.064 57.143 0.00 0.00 41.67 3.08
539 540 0.325203 GGGAGAGAAGAGCCTCACCT 60.325 60.000 0.00 0.00 41.67 4.00
540 541 0.616111 TGGGAGAGAAGAGCCTCACC 60.616 60.000 0.00 0.00 41.37 4.02
541 542 1.494960 ATGGGAGAGAAGAGCCTCAC 58.505 55.000 0.00 0.00 35.68 3.51
542 543 2.260639 AATGGGAGAGAAGAGCCTCA 57.739 50.000 0.00 0.00 35.68 3.86
543 544 3.643199 AAAATGGGAGAGAAGAGCCTC 57.357 47.619 0.00 0.00 0.00 4.70
544 545 4.538089 AGTAAAAATGGGAGAGAAGAGCCT 59.462 41.667 0.00 0.00 0.00 4.58
545 546 4.849518 AGTAAAAATGGGAGAGAAGAGCC 58.150 43.478 0.00 0.00 0.00 4.70
546 547 4.878971 GGAGTAAAAATGGGAGAGAAGAGC 59.121 45.833 0.00 0.00 0.00 4.09
547 548 6.306643 AGGAGTAAAAATGGGAGAGAAGAG 57.693 41.667 0.00 0.00 0.00 2.85
548 549 6.296489 GGAAGGAGTAAAAATGGGAGAGAAGA 60.296 42.308 0.00 0.00 0.00 2.87
549 550 5.883115 GGAAGGAGTAAAAATGGGAGAGAAG 59.117 44.000 0.00 0.00 0.00 2.85
550 551 5.312178 TGGAAGGAGTAAAAATGGGAGAGAA 59.688 40.000 0.00 0.00 0.00 2.87
551 552 4.849810 TGGAAGGAGTAAAAATGGGAGAGA 59.150 41.667 0.00 0.00 0.00 3.10
552 553 5.179452 TGGAAGGAGTAAAAATGGGAGAG 57.821 43.478 0.00 0.00 0.00 3.20
553 554 5.509498 CATGGAAGGAGTAAAAATGGGAGA 58.491 41.667 0.00 0.00 0.00 3.71
554 555 4.646492 CCATGGAAGGAGTAAAAATGGGAG 59.354 45.833 5.56 0.00 31.43 4.30
555 556 4.609301 CCATGGAAGGAGTAAAAATGGGA 58.391 43.478 5.56 0.00 31.43 4.37
556 557 3.706086 CCCATGGAAGGAGTAAAAATGGG 59.294 47.826 15.22 3.55 44.96 4.00
557 558 4.160252 CACCCATGGAAGGAGTAAAAATGG 59.840 45.833 15.22 0.00 34.21 3.16
558 559 5.016173 TCACCCATGGAAGGAGTAAAAATG 58.984 41.667 15.22 0.00 0.00 2.32
559 560 5.015178 TCTCACCCATGGAAGGAGTAAAAAT 59.985 40.000 15.22 0.00 0.00 1.82
560 561 4.352595 TCTCACCCATGGAAGGAGTAAAAA 59.647 41.667 15.22 0.00 0.00 1.94
561 562 3.913799 TCTCACCCATGGAAGGAGTAAAA 59.086 43.478 15.22 0.00 0.00 1.52
562 563 3.263425 GTCTCACCCATGGAAGGAGTAAA 59.737 47.826 15.22 0.00 0.00 2.01
563 564 2.838202 GTCTCACCCATGGAAGGAGTAA 59.162 50.000 15.22 0.00 0.00 2.24
564 565 2.044492 AGTCTCACCCATGGAAGGAGTA 59.956 50.000 15.22 4.67 0.00 2.59
565 566 1.203364 AGTCTCACCCATGGAAGGAGT 60.203 52.381 15.22 5.95 0.00 3.85
566 567 1.484240 GAGTCTCACCCATGGAAGGAG 59.516 57.143 15.22 16.13 0.00 3.69
567 568 1.079490 AGAGTCTCACCCATGGAAGGA 59.921 52.381 15.22 6.55 0.00 3.36
568 569 1.209019 CAGAGTCTCACCCATGGAAGG 59.791 57.143 15.22 1.71 0.00 3.46
569 570 1.905215 ACAGAGTCTCACCCATGGAAG 59.095 52.381 15.22 7.87 0.00 3.46
570 571 1.625315 CACAGAGTCTCACCCATGGAA 59.375 52.381 15.22 0.00 0.00 3.53
571 572 1.269958 CACAGAGTCTCACCCATGGA 58.730 55.000 15.22 0.00 0.00 3.41
572 573 0.251354 CCACAGAGTCTCACCCATGG 59.749 60.000 4.14 4.14 0.00 3.66
573 574 0.979665 ACCACAGAGTCTCACCCATG 59.020 55.000 1.94 0.00 0.00 3.66
574 575 2.623418 TACCACAGAGTCTCACCCAT 57.377 50.000 1.94 0.00 0.00 4.00
575 576 2.391926 TTACCACAGAGTCTCACCCA 57.608 50.000 1.94 0.00 0.00 4.51
576 577 2.832129 TCATTACCACAGAGTCTCACCC 59.168 50.000 1.94 0.00 0.00 4.61
577 578 3.511934 AGTCATTACCACAGAGTCTCACC 59.488 47.826 1.94 0.00 0.00 4.02
578 579 4.021894 ACAGTCATTACCACAGAGTCTCAC 60.022 45.833 1.94 0.00 0.00 3.51
579 580 4.152647 ACAGTCATTACCACAGAGTCTCA 58.847 43.478 1.94 0.00 0.00 3.27
580 581 4.673061 CGACAGTCATTACCACAGAGTCTC 60.673 50.000 0.41 0.00 0.00 3.36
581 582 3.191581 CGACAGTCATTACCACAGAGTCT 59.808 47.826 0.41 0.00 0.00 3.24
582 583 3.502920 CGACAGTCATTACCACAGAGTC 58.497 50.000 0.41 0.00 0.00 3.36
583 584 2.352814 GCGACAGTCATTACCACAGAGT 60.353 50.000 0.41 0.00 0.00 3.24
584 585 2.263077 GCGACAGTCATTACCACAGAG 58.737 52.381 0.41 0.00 0.00 3.35
585 586 1.067142 GGCGACAGTCATTACCACAGA 60.067 52.381 0.41 0.00 0.00 3.41
586 587 1.359848 GGCGACAGTCATTACCACAG 58.640 55.000 0.41 0.00 0.00 3.66
587 588 0.389296 CGGCGACAGTCATTACCACA 60.389 55.000 0.00 0.00 0.00 4.17
588 589 1.082117 CCGGCGACAGTCATTACCAC 61.082 60.000 9.30 0.00 0.00 4.16
589 590 1.216977 CCGGCGACAGTCATTACCA 59.783 57.895 9.30 0.00 0.00 3.25
590 591 0.804933 GTCCGGCGACAGTCATTACC 60.805 60.000 9.30 0.00 38.99 2.85
591 592 1.138047 CGTCCGGCGACAGTCATTAC 61.138 60.000 9.30 0.00 44.77 1.89
592 593 1.138036 CGTCCGGCGACAGTCATTA 59.862 57.895 9.30 0.00 44.77 1.90
593 594 2.126071 CGTCCGGCGACAGTCATT 60.126 61.111 9.30 0.00 44.77 2.57
594 595 4.796231 GCGTCCGGCGACAGTCAT 62.796 66.667 20.06 0.00 44.77 3.06
603 604 3.597728 TTTTTGGTGGCGTCCGGC 61.598 61.111 6.27 6.27 42.51 6.13
617 618 4.347607 CCCATCTGATCTCCCAACTTTTT 58.652 43.478 0.00 0.00 0.00 1.94
618 619 3.309410 CCCCATCTGATCTCCCAACTTTT 60.309 47.826 0.00 0.00 0.00 2.27
619 620 2.243221 CCCCATCTGATCTCCCAACTTT 59.757 50.000 0.00 0.00 0.00 2.66
620 621 1.849039 CCCCATCTGATCTCCCAACTT 59.151 52.381 0.00 0.00 0.00 2.66
621 622 1.516110 CCCCATCTGATCTCCCAACT 58.484 55.000 0.00 0.00 0.00 3.16
622 623 0.179006 GCCCCATCTGATCTCCCAAC 60.179 60.000 0.00 0.00 0.00 3.77
623 624 0.327867 AGCCCCATCTGATCTCCCAA 60.328 55.000 0.00 0.00 0.00 4.12
624 625 0.765903 GAGCCCCATCTGATCTCCCA 60.766 60.000 0.00 0.00 0.00 4.37
625 626 0.765903 TGAGCCCCATCTGATCTCCC 60.766 60.000 0.00 0.00 0.00 4.30
626 627 0.396060 GTGAGCCCCATCTGATCTCC 59.604 60.000 0.00 0.00 0.00 3.71
635 636 3.717294 GGACGGTGTGAGCCCCAT 61.717 66.667 0.00 0.00 0.00 4.00
639 640 3.222354 AAGACGGACGGTGTGAGCC 62.222 63.158 0.00 0.00 0.00 4.70
640 641 1.733399 GAAGACGGACGGTGTGAGC 60.733 63.158 0.00 0.00 0.00 4.26
641 642 0.109689 GAGAAGACGGACGGTGTGAG 60.110 60.000 0.00 0.00 0.00 3.51
642 643 0.536687 AGAGAAGACGGACGGTGTGA 60.537 55.000 0.00 0.00 0.00 3.58
643 644 0.314302 AAGAGAAGACGGACGGTGTG 59.686 55.000 0.00 0.00 0.00 3.82
644 645 1.038280 AAAGAGAAGACGGACGGTGT 58.962 50.000 0.00 0.00 0.00 4.16
650 651 2.101917 ACGAACCAAAAGAGAAGACGGA 59.898 45.455 0.00 0.00 0.00 4.69
710 712 5.770417 AGAAGTACAAATTCGTTCGACTCT 58.230 37.500 0.00 0.00 0.00 3.24
711 713 5.857517 AGAGAAGTACAAATTCGTTCGACTC 59.142 40.000 0.00 0.00 0.00 3.36
729 732 3.053245 TCAGGAGTAGAAGGGGAGAGAAG 60.053 52.174 0.00 0.00 0.00 2.85
739 742 3.685139 TTGGCTGTTCAGGAGTAGAAG 57.315 47.619 1.97 0.00 0.00 2.85
740 743 4.141482 ACTTTTGGCTGTTCAGGAGTAGAA 60.141 41.667 1.97 0.00 0.00 2.10
741 744 3.391296 ACTTTTGGCTGTTCAGGAGTAGA 59.609 43.478 1.97 0.00 0.00 2.59
742 745 3.744660 ACTTTTGGCTGTTCAGGAGTAG 58.255 45.455 1.97 0.00 0.00 2.57
743 746 3.740115 GACTTTTGGCTGTTCAGGAGTA 58.260 45.455 1.97 0.00 0.00 2.59
744 747 2.576615 GACTTTTGGCTGTTCAGGAGT 58.423 47.619 1.97 0.00 0.00 3.85
747 750 1.308998 ACGACTTTTGGCTGTTCAGG 58.691 50.000 0.00 0.00 0.00 3.86
755 758 2.372350 CAGACGAAAACGACTTTTGGC 58.628 47.619 0.00 0.00 36.74 4.52
808 815 0.804989 GTCAATCGAAACCCAGCCAG 59.195 55.000 0.00 0.00 0.00 4.85
810 817 0.521735 GTGTCAATCGAAACCCAGCC 59.478 55.000 0.00 0.00 0.00 4.85
811 818 0.165944 CGTGTCAATCGAAACCCAGC 59.834 55.000 0.00 0.00 0.00 4.85
817 824 1.856688 CCACGCGTGTCAATCGAAA 59.143 52.632 34.81 0.00 0.00 3.46
818 825 2.663478 GCCACGCGTGTCAATCGAA 61.663 57.895 34.81 0.00 0.00 3.71
824 831 4.002506 ATCAGGCCACGCGTGTCA 62.003 61.111 34.81 15.62 43.65 3.58
1092 1130 1.507174 GGAGGTGAGGACGTCGAAG 59.493 63.158 9.92 0.00 37.78 3.79
1150 1188 8.923683 GTTATGTCTTGTAAACCTCTAACTGAC 58.076 37.037 0.00 0.00 0.00 3.51
1203 1255 4.083324 ACGATGTAAACAACCTGCAGAATG 60.083 41.667 17.39 15.77 40.87 2.67
1332 1774 4.040217 AGGCAGCACAATTTTCATTAACCA 59.960 37.500 0.00 0.00 0.00 3.67
1334 1776 7.832503 AATAGGCAGCACAATTTTCATTAAC 57.167 32.000 0.00 0.00 0.00 2.01
1377 1819 3.660865 ACCACCTTAACTCGTCATCAAC 58.339 45.455 0.00 0.00 0.00 3.18
1385 1827 1.737793 GGCATGAACCACCTTAACTCG 59.262 52.381 0.00 0.00 0.00 4.18
1539 1981 9.125026 ACTGAAGAAATAGATTCGCCATTTATT 57.875 29.630 0.00 0.00 43.15 1.40
1540 1982 8.682936 ACTGAAGAAATAGATTCGCCATTTAT 57.317 30.769 0.00 0.00 43.15 1.40
1541 1983 8.506168 AACTGAAGAAATAGATTCGCCATTTA 57.494 30.769 0.00 0.00 43.15 1.40
1573 2015 4.279922 GGCTTGGTTAGAAAGGTTTGCTTA 59.720 41.667 0.00 0.00 0.00 3.09
1574 2016 3.069586 GGCTTGGTTAGAAAGGTTTGCTT 59.930 43.478 0.00 0.00 0.00 3.91
1575 2017 2.628178 GGCTTGGTTAGAAAGGTTTGCT 59.372 45.455 0.00 0.00 0.00 3.91
1576 2018 2.628178 AGGCTTGGTTAGAAAGGTTTGC 59.372 45.455 0.00 0.00 0.00 3.68
1577 2019 4.937201 AAGGCTTGGTTAGAAAGGTTTG 57.063 40.909 0.00 0.00 0.00 2.93
1578 2020 5.950544 AAAAGGCTTGGTTAGAAAGGTTT 57.049 34.783 0.00 0.00 0.00 3.27
1579 2021 6.553476 ACATAAAAGGCTTGGTTAGAAAGGTT 59.447 34.615 0.00 0.00 0.00 3.50
1580 2022 6.015434 CACATAAAAGGCTTGGTTAGAAAGGT 60.015 38.462 0.00 0.00 0.00 3.50
1581 2023 6.389906 CACATAAAAGGCTTGGTTAGAAAGG 58.610 40.000 0.00 0.00 0.00 3.11
1590 2032 5.581126 TTGATAGCACATAAAAGGCTTGG 57.419 39.130 0.00 0.00 39.01 3.61
1614 2057 9.607988 CCAGTTACCTGAAAATGTACATGTATA 57.392 33.333 9.63 6.83 41.50 1.47
1615 2058 7.556275 CCCAGTTACCTGAAAATGTACATGTAT 59.444 37.037 9.63 0.00 41.50 2.29
1679 2122 1.151810 AAAGGGGCTGTCCTCCTCA 60.152 57.895 0.00 0.00 35.80 3.86
1797 2240 5.579047 TCTGAATCCAAAATGTACCATGGT 58.421 37.500 23.55 23.55 34.50 3.55
1798 2241 6.528537 TTCTGAATCCAAAATGTACCATGG 57.471 37.500 11.19 11.19 0.00 3.66
1829 2276 6.489361 CAGATAAAGAAATTCCCTAGCTGCAT 59.511 38.462 1.02 0.00 0.00 3.96
1894 2341 4.156455 AGGATCACCGCATTTCTTGTAT 57.844 40.909 0.00 0.00 41.83 2.29
1916 2363 9.977762 GTTTTCTTCTTTCGTTAAGTTAGTTGA 57.022 29.630 0.00 0.00 35.28 3.18
1927 2374 3.800531 TCCCGAGTTTTCTTCTTTCGTT 58.199 40.909 0.00 0.00 0.00 3.85
1960 2407 1.141591 GAAAAGCCGCATGATTGCCG 61.142 55.000 0.00 0.00 46.57 5.69
1993 2440 4.017222 ACATCCTCATGAAGAAATTCCCCA 60.017 41.667 0.00 0.00 33.72 4.96
2001 2448 4.037327 CGCTCTCTACATCCTCATGAAGAA 59.963 45.833 0.00 0.00 33.72 2.52
2002 2449 3.567585 CGCTCTCTACATCCTCATGAAGA 59.432 47.826 0.00 0.00 33.72 2.87
2003 2450 3.567585 TCGCTCTCTACATCCTCATGAAG 59.432 47.826 0.00 0.00 33.72 3.02
2044 2494 4.874970 TCTTTTCAAGGCAATGAAAGAGC 58.125 39.130 15.11 0.00 46.63 4.09
2117 2567 3.689872 AGGGATGCTAGAACTGACCTA 57.310 47.619 0.00 0.00 0.00 3.08
2132 2582 0.893727 GCAACACCGTTGGAAGGGAT 60.894 55.000 8.79 0.00 37.39 3.85
2134 2584 1.528309 AGCAACACCGTTGGAAGGG 60.528 57.895 8.79 0.00 39.76 3.95
2145 2595 1.160137 CAGGAAGCTACCAGCAACAC 58.840 55.000 0.38 0.00 45.56 3.32
2188 2638 5.204292 TCATTCAGTATCTCTACCAGCAGT 58.796 41.667 0.00 0.00 0.00 4.40
2315 2765 0.529378 ACGGTAAACCCTACGAGCTG 59.471 55.000 0.00 0.00 0.00 4.24
2335 2785 3.127533 AGCTTGTCGATTGCGCCC 61.128 61.111 4.18 0.00 37.46 6.13
2407 2857 5.972107 TCTGGACTTACGCTAGTAACTTT 57.028 39.130 0.00 0.00 37.87 2.66
2434 2884 1.467734 GATCCAAGACAAGTGCTGCTG 59.532 52.381 0.00 0.00 0.00 4.41
2462 2917 3.495629 GGTCAGCAGCAGATGGATATCAA 60.496 47.826 4.83 0.00 35.70 2.57
2498 2954 1.064017 TCTGCTCCCAAGTTTGTGGTT 60.064 47.619 0.00 0.00 36.90 3.67
2573 3029 2.224426 TGGCAGGTAATGAACGAACTGT 60.224 45.455 0.00 0.00 0.00 3.55
2580 3036 3.004752 AGTCCATGGCAGGTAATGAAC 57.995 47.619 6.96 0.00 0.00 3.18
2584 3040 2.092212 CAGGAAGTCCATGGCAGGTAAT 60.092 50.000 6.96 0.00 38.89 1.89
2585 3041 1.281867 CAGGAAGTCCATGGCAGGTAA 59.718 52.381 6.96 0.00 38.89 2.85
2587 3043 1.687612 CAGGAAGTCCATGGCAGGT 59.312 57.895 6.96 0.00 38.89 4.00
2588 3044 1.077212 CCAGGAAGTCCATGGCAGG 60.077 63.158 6.96 0.00 38.89 4.85
2592 3048 1.751927 GCTGCCAGGAAGTCCATGG 60.752 63.158 4.97 4.97 38.89 3.66
2593 3049 0.395311 ATGCTGCCAGGAAGTCCATG 60.395 55.000 0.00 0.00 38.89 3.66
2594 3050 0.395311 CATGCTGCCAGGAAGTCCAT 60.395 55.000 0.00 0.00 38.89 3.41
2595 3051 1.001764 CATGCTGCCAGGAAGTCCA 60.002 57.895 0.00 0.00 38.89 4.02
2596 3052 2.413142 GCATGCTGCCAGGAAGTCC 61.413 63.158 11.37 0.00 37.42 3.85
2606 3062 2.012902 GAACATGGAGGGCATGCTGC 62.013 60.000 18.92 4.38 44.08 5.25
2611 3067 2.537633 AACATGAACATGGAGGGCAT 57.462 45.000 17.25 0.00 42.91 4.40
2613 3069 5.769662 TGATATAAACATGAACATGGAGGGC 59.230 40.000 17.25 3.61 42.91 5.19
2632 3103 5.868801 CCTGGTCGTTGCAAAAATTTGATAT 59.131 36.000 0.00 0.00 40.55 1.63
2633 3104 5.226396 CCTGGTCGTTGCAAAAATTTGATA 58.774 37.500 0.00 0.00 40.55 2.15
2635 3106 3.452474 CCTGGTCGTTGCAAAAATTTGA 58.548 40.909 0.00 0.00 40.55 2.69
2636 3107 2.032979 GCCTGGTCGTTGCAAAAATTTG 60.033 45.455 0.00 1.52 41.03 2.32
2637 3108 2.209273 GCCTGGTCGTTGCAAAAATTT 58.791 42.857 0.00 0.00 0.00 1.82
2639 3110 0.749649 TGCCTGGTCGTTGCAAAAAT 59.250 45.000 0.00 0.00 30.85 1.82
2642 3113 1.153066 TCTGCCTGGTCGTTGCAAA 60.153 52.632 0.00 0.00 34.06 3.68
2643 3114 1.597854 CTCTGCCTGGTCGTTGCAA 60.598 57.895 0.00 0.00 34.06 4.08
2644 3115 2.031012 CTCTGCCTGGTCGTTGCA 59.969 61.111 0.00 0.00 0.00 4.08
2645 3116 2.743928 CCTCTGCCTGGTCGTTGC 60.744 66.667 0.00 0.00 0.00 4.17
2646 3117 2.743928 GCCTCTGCCTGGTCGTTG 60.744 66.667 0.00 0.00 0.00 4.10
2647 3118 3.241530 TGCCTCTGCCTGGTCGTT 61.242 61.111 0.00 0.00 36.33 3.85
2651 3122 3.325753 GTCCTGCCTCTGCCTGGT 61.326 66.667 0.00 0.00 36.33 4.00
2681 3152 4.820173 ACGGTGATCGATATGACTACAAGA 59.180 41.667 0.00 0.00 42.43 3.02
2684 3155 4.131596 TCACGGTGATCGATATGACTACA 58.868 43.478 6.76 0.00 42.43 2.74
2687 3158 4.142881 CGTATCACGGTGATCGATATGACT 60.143 45.833 25.75 2.98 42.43 3.41
2691 3162 3.132629 GCGTATCACGGTGATCGATAT 57.867 47.619 29.56 13.44 42.82 1.63
2701 3172 1.121240 GATGACGAAGCGTATCACGG 58.879 55.000 0.44 0.00 42.82 4.94
2729 3200 2.035626 ACCACCCCAATTCCGCAG 59.964 61.111 0.00 0.00 0.00 5.18
2738 3209 4.284550 GCTGCCTTCACCACCCCA 62.285 66.667 0.00 0.00 0.00 4.96
2753 3224 2.284258 AACCCGAGCTCTCTGGCT 60.284 61.111 12.85 0.00 46.11 4.75
2759 3230 3.715015 GGAAGGAACCCGAGCTCT 58.285 61.111 12.85 0.00 0.00 4.09
2774 3245 1.826921 GTACAGGGGCGATCTCGGA 60.827 63.158 1.34 0.00 40.23 4.55
2777 3248 2.728817 CGGTACAGGGGCGATCTC 59.271 66.667 0.00 0.00 0.00 2.75
2828 3299 3.257469 CATATACCGATGCTCATGGCT 57.743 47.619 7.54 0.00 42.39 4.75
2846 3317 3.067742 ACGCTACAATAGTAAGTCGGCAT 59.932 43.478 0.00 0.00 0.00 4.40
2847 3318 2.424601 ACGCTACAATAGTAAGTCGGCA 59.575 45.455 0.00 0.00 0.00 5.69
2860 3331 3.368013 CCCATCACTAGAACACGCTACAA 60.368 47.826 0.00 0.00 0.00 2.41
2861 3332 2.165641 CCCATCACTAGAACACGCTACA 59.834 50.000 0.00 0.00 0.00 2.74
2889 3360 2.651361 CTCAGAACGCGACACCCT 59.349 61.111 15.93 0.00 0.00 4.34
2891 3362 2.022129 CACCTCAGAACGCGACACC 61.022 63.158 15.93 0.00 0.00 4.16
2893 3364 0.874175 CAACACCTCAGAACGCGACA 60.874 55.000 15.93 0.00 0.00 4.35
2896 3367 2.954753 GCCAACACCTCAGAACGCG 61.955 63.158 3.53 3.53 0.00 6.01
2897 3368 1.569479 GAGCCAACACCTCAGAACGC 61.569 60.000 0.00 0.00 0.00 4.84
2986 3459 2.672996 GCAACCAGGTGCGTCCAT 60.673 61.111 0.00 0.00 39.02 3.41
3013 3486 2.677979 CGTCGACCAGAGCGTGAGA 61.678 63.158 10.58 0.00 0.00 3.27
3019 3492 1.733399 GAACACCGTCGACCAGAGC 60.733 63.158 10.58 0.00 0.00 4.09
3095 3568 3.772932 ACAATGCTTGAAACACACTGTG 58.227 40.909 7.68 7.68 39.75 3.66
3099 3572 4.266029 CACTTGACAATGCTTGAAACACAC 59.734 41.667 3.37 0.00 0.00 3.82
3124 3598 5.139727 TGGGCATATCTCTTATTTGGGTTG 58.860 41.667 0.00 0.00 0.00 3.77
3128 3602 6.119240 TCTCTGGGCATATCTCTTATTTGG 57.881 41.667 0.00 0.00 0.00 3.28
3154 3628 2.813754 TGTGTTCTGCTTATCAGTTGCC 59.186 45.455 0.00 0.00 43.32 4.52
3167 3641 1.162698 CCATGACCTGCTGTGTTCTG 58.837 55.000 0.00 0.00 0.00 3.02
3168 3642 0.767375 ACCATGACCTGCTGTGTTCT 59.233 50.000 0.00 0.00 0.00 3.01
3202 3676 8.793592 ACAGGGTTGTACAAATCTTTCTTTATC 58.206 33.333 10.51 0.00 35.25 1.75
3210 3684 5.690865 TCTTCACAGGGTTGTACAAATCTT 58.309 37.500 10.51 0.00 35.25 2.40
3217 3691 2.841442 AGCTCTTCACAGGGTTGTAC 57.159 50.000 0.00 0.00 35.25 2.90
3224 3698 1.480137 CCTGGAGTAGCTCTTCACAGG 59.520 57.143 14.64 14.64 36.92 4.00
3236 3710 2.532250 TGTCAGATCAGCCTGGAGTA 57.468 50.000 0.00 0.00 34.99 2.59
3238 3712 4.040095 TGATATTGTCAGATCAGCCTGGAG 59.960 45.833 0.00 0.00 34.99 3.86
3307 3781 1.256812 CCCTTTTTCCGCTTCCACAT 58.743 50.000 0.00 0.00 0.00 3.21
3311 3785 1.324383 TTCACCCTTTTTCCGCTTCC 58.676 50.000 0.00 0.00 0.00 3.46
3313 3787 1.000843 GCATTCACCCTTTTTCCGCTT 59.999 47.619 0.00 0.00 0.00 4.68
3533 4008 5.131809 GCATAGAAGGGCCCATCTATCTTAT 59.868 44.000 36.13 21.38 35.56 1.73
3603 4078 0.804989 GCGATGGGTATGCATTAGCC 59.195 55.000 3.54 10.68 46.78 3.93
3675 4173 3.490348 CCCTGTGTCATTCCTTCTTGTT 58.510 45.455 0.00 0.00 0.00 2.83
3676 4174 2.815589 GCCCTGTGTCATTCCTTCTTGT 60.816 50.000 0.00 0.00 0.00 3.16
3677 4175 1.815003 GCCCTGTGTCATTCCTTCTTG 59.185 52.381 0.00 0.00 0.00 3.02
3680 4178 1.747355 CATGCCCTGTGTCATTCCTTC 59.253 52.381 0.00 0.00 0.00 3.46
3688 4186 0.250901 AACCAGACATGCCCTGTGTC 60.251 55.000 12.83 0.00 44.85 3.67
3702 4200 2.242043 AGTTTGCAGGGAATGAACCAG 58.758 47.619 0.00 0.00 0.00 4.00
3709 4207 6.902974 AGGGATAATTTAAGTTTGCAGGGAAT 59.097 34.615 0.00 0.00 0.00 3.01
3719 4218 7.878495 TGGTCATACCAGGGATAATTTAAGTT 58.122 34.615 0.00 0.00 44.79 2.66
3739 4238 1.001020 GGCCCACATGTCATGGTCA 60.001 57.895 17.08 0.00 35.23 4.02
3780 4279 9.056799 TGGATATCCATATACTAATTTGGAGCA 57.943 33.333 20.98 0.00 43.69 4.26
3816 4317 5.545063 TGCACCTTCGAATATCTTATGGA 57.455 39.130 0.00 0.00 0.00 3.41
3821 4322 5.245531 TCTGTTTGCACCTTCGAATATCTT 58.754 37.500 0.00 0.00 0.00 2.40
3823 4324 5.741388 ATCTGTTTGCACCTTCGAATATC 57.259 39.130 0.00 0.00 0.00 1.63
3825 4326 5.295431 CAATCTGTTTGCACCTTCGAATA 57.705 39.130 0.00 0.00 0.00 1.75
3870 4374 5.532406 TCCAGCTTCATTTATTGCAGTATCC 59.468 40.000 0.00 0.00 0.00 2.59
3932 4436 3.104519 TGCCAAGATGATGTGGGAAAT 57.895 42.857 0.00 0.00 35.28 2.17
4025 4529 4.704540 TGTATCTTGTAATGCACCCCAAAG 59.295 41.667 0.00 0.00 0.00 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.