Multiple sequence alignment - TraesCS4D01G318000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G318000 chr4D 100.000 2624 0 0 1 2624 482722787 482720164 0.000000e+00 4846.0
1 TraesCS4D01G318000 chr5A 84.459 1924 110 73 155 1963 659841339 659843188 0.000000e+00 1722.0
2 TraesCS4D01G318000 chr5A 86.989 269 20 10 1372 1629 20276753 20276489 3.300000e-74 289.0
3 TraesCS4D01G318000 chr5A 76.692 266 37 16 2302 2558 659843577 659843826 9.860000e-25 124.0
4 TraesCS4D01G318000 chr4B 82.871 2020 95 106 263 2156 612325739 612323845 0.000000e+00 1581.0
5 TraesCS4D01G318000 chr3A 87.016 516 49 12 1125 1629 103440332 103439824 1.360000e-157 566.0
6 TraesCS4D01G318000 chr3A 87.692 260 25 6 1372 1624 95262314 95262573 1.970000e-76 296.0
7 TraesCS4D01G318000 chr3A 80.603 232 17 12 603 822 103440546 103440331 1.260000e-33 154.0
8 TraesCS4D01G318000 chr7A 86.898 519 47 13 1125 1629 159038071 159037560 1.760000e-156 562.0
9 TraesCS4D01G318000 chr7A 87.547 265 26 6 1372 1629 40977905 40978169 1.530000e-77 300.0
10 TraesCS4D01G318000 chr7A 82.759 232 12 14 603 822 159038285 159038070 5.770000e-42 182.0
11 TraesCS4D01G318000 chr2A 87.324 497 46 11 1142 1624 290016434 290016927 1.060000e-153 553.0
12 TraesCS4D01G318000 chr2A 85.921 277 28 6 1125 1397 695828415 695828146 4.270000e-73 285.0
13 TraesCS4D01G318000 chr2A 81.034 232 16 11 603 822 290016206 290016421 2.700000e-35 159.0
14 TraesCS4D01G318000 chr4A 86.573 499 52 9 1142 1629 416467241 416466747 1.070000e-148 536.0
15 TraesCS4D01G318000 chr4A 85.393 89 4 4 736 822 416467335 416467254 1.670000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G318000 chr4D 482720164 482722787 2623 True 4846.0 4846 100.0000 1 2624 1 chr4D.!!$R1 2623
1 TraesCS4D01G318000 chr5A 659841339 659843826 2487 False 923.0 1722 80.5755 155 2558 2 chr5A.!!$F1 2403
2 TraesCS4D01G318000 chr4B 612323845 612325739 1894 True 1581.0 1581 82.8710 263 2156 1 chr4B.!!$R1 1893
3 TraesCS4D01G318000 chr3A 103439824 103440546 722 True 360.0 566 83.8095 603 1629 2 chr3A.!!$R1 1026
4 TraesCS4D01G318000 chr7A 159037560 159038285 725 True 372.0 562 84.8285 603 1629 2 chr7A.!!$R1 1026
5 TraesCS4D01G318000 chr2A 290016206 290016927 721 False 356.0 553 84.1790 603 1624 2 chr2A.!!$F1 1021
6 TraesCS4D01G318000 chr4A 416466747 416467335 588 True 310.1 536 85.9830 736 1629 2 chr4A.!!$R1 893

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
479 508 0.107848 GGGGCAAGTATGTGCGTACT 60.108 55.0 4.97 0.0 45.91 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2393 2725 0.033796 AGGTGGGTATTCGTCGGAGA 60.034 55.0 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.744087 TGAACTTAGTTACTGCAATCAATGT 57.256 32.000 0.00 0.00 0.00 2.71
26 27 7.806690 TGAACTTAGTTACTGCAATCAATGTC 58.193 34.615 0.00 0.00 0.00 3.06
27 28 7.443879 TGAACTTAGTTACTGCAATCAATGTCA 59.556 33.333 0.00 0.00 0.00 3.58
28 29 7.928307 ACTTAGTTACTGCAATCAATGTCAT 57.072 32.000 0.00 0.00 0.00 3.06
29 30 7.755591 ACTTAGTTACTGCAATCAATGTCATG 58.244 34.615 0.00 0.00 0.00 3.07
30 31 4.990257 AGTTACTGCAATCAATGTCATGC 58.010 39.130 0.00 0.00 39.22 4.06
31 32 2.953466 ACTGCAATCAATGTCATGCC 57.047 45.000 0.00 0.00 38.00 4.40
32 33 2.453521 ACTGCAATCAATGTCATGCCT 58.546 42.857 0.00 0.00 38.00 4.75
33 34 3.623703 ACTGCAATCAATGTCATGCCTA 58.376 40.909 0.00 0.00 38.00 3.93
34 35 3.630769 ACTGCAATCAATGTCATGCCTAG 59.369 43.478 0.00 0.00 38.00 3.02
35 36 3.881089 CTGCAATCAATGTCATGCCTAGA 59.119 43.478 0.00 0.00 38.00 2.43
36 37 4.466827 TGCAATCAATGTCATGCCTAGAT 58.533 39.130 0.00 0.00 38.00 1.98
37 38 4.277423 TGCAATCAATGTCATGCCTAGATG 59.723 41.667 0.00 0.00 38.00 2.90
38 39 4.795268 CAATCAATGTCATGCCTAGATGC 58.205 43.478 0.00 0.00 0.00 3.91
39 40 3.564053 TCAATGTCATGCCTAGATGCA 57.436 42.857 0.00 0.00 46.94 3.96
40 41 3.208594 TCAATGTCATGCCTAGATGCAC 58.791 45.455 0.00 0.00 45.48 4.57
41 42 2.267174 ATGTCATGCCTAGATGCACC 57.733 50.000 0.00 0.00 45.48 5.01
42 43 0.911053 TGTCATGCCTAGATGCACCA 59.089 50.000 0.00 0.00 45.48 4.17
43 44 1.134310 TGTCATGCCTAGATGCACCAG 60.134 52.381 0.00 0.00 45.48 4.00
44 45 1.134280 GTCATGCCTAGATGCACCAGT 60.134 52.381 0.00 0.00 45.48 4.00
45 46 2.103094 GTCATGCCTAGATGCACCAGTA 59.897 50.000 0.00 0.00 45.48 2.74
46 47 2.103094 TCATGCCTAGATGCACCAGTAC 59.897 50.000 0.00 0.00 45.48 2.73
47 48 1.567357 TGCCTAGATGCACCAGTACA 58.433 50.000 0.00 0.00 36.04 2.90
48 49 1.482182 TGCCTAGATGCACCAGTACAG 59.518 52.381 0.00 0.00 36.04 2.74
49 50 1.202580 GCCTAGATGCACCAGTACAGG 60.203 57.143 2.14 2.14 0.00 4.00
50 51 1.202580 CCTAGATGCACCAGTACAGGC 60.203 57.143 3.83 0.00 0.00 4.85
51 52 0.459899 TAGATGCACCAGTACAGGCG 59.540 55.000 3.83 0.00 0.00 5.52
52 53 1.218047 GATGCACCAGTACAGGCGA 59.782 57.895 3.83 0.00 0.00 5.54
53 54 0.179073 GATGCACCAGTACAGGCGAT 60.179 55.000 3.83 0.00 0.00 4.58
54 55 0.462581 ATGCACCAGTACAGGCGATG 60.463 55.000 3.83 0.00 0.00 3.84
55 56 1.815421 GCACCAGTACAGGCGATGG 60.815 63.158 3.83 0.00 38.83 3.51
56 57 1.815421 CACCAGTACAGGCGATGGC 60.815 63.158 3.83 0.00 36.21 4.40
57 58 2.290287 ACCAGTACAGGCGATGGCA 61.290 57.895 3.83 0.00 42.47 4.92
58 59 1.146930 CCAGTACAGGCGATGGCAT 59.853 57.895 0.00 0.00 42.47 4.40
63 64 3.592814 CAGGCGATGGCATGGCTG 61.593 66.667 29.28 27.55 46.66 4.85
64 65 3.800833 AGGCGATGGCATGGCTGA 61.801 61.111 29.28 0.54 42.47 4.26
65 66 2.596631 GGCGATGGCATGGCTGAT 60.597 61.111 29.28 6.29 42.47 2.90
66 67 2.643272 GCGATGGCATGGCTGATG 59.357 61.111 24.77 8.70 39.62 3.07
77 78 4.237445 GCTGATGCAGGCTGTCAT 57.763 55.556 19.60 19.60 39.41 3.06
78 79 2.490165 GCTGATGCAGGCTGTCATT 58.510 52.632 17.16 5.23 39.41 2.57
79 80 0.381089 GCTGATGCAGGCTGTCATTC 59.619 55.000 17.16 13.02 39.41 2.67
80 81 2.017623 GCTGATGCAGGCTGTCATTCT 61.018 52.381 17.16 0.02 39.41 2.40
81 82 1.941294 CTGATGCAGGCTGTCATTCTC 59.059 52.381 17.16 9.59 0.00 2.87
82 83 1.558294 TGATGCAGGCTGTCATTCTCT 59.442 47.619 17.16 0.00 0.00 3.10
83 84 1.941294 GATGCAGGCTGTCATTCTCTG 59.059 52.381 17.16 0.00 0.00 3.35
84 85 0.689055 TGCAGGCTGTCATTCTCTGT 59.311 50.000 17.16 0.00 0.00 3.41
85 86 1.085091 GCAGGCTGTCATTCTCTGTG 58.915 55.000 17.16 0.00 0.00 3.66
86 87 1.085091 CAGGCTGTCATTCTCTGTGC 58.915 55.000 6.28 0.00 0.00 4.57
87 88 0.390866 AGGCTGTCATTCTCTGTGCG 60.391 55.000 0.00 0.00 0.00 5.34
88 89 0.671781 GGCTGTCATTCTCTGTGCGT 60.672 55.000 0.00 0.00 0.00 5.24
89 90 0.441533 GCTGTCATTCTCTGTGCGTG 59.558 55.000 0.00 0.00 0.00 5.34
90 91 1.788258 CTGTCATTCTCTGTGCGTGT 58.212 50.000 0.00 0.00 0.00 4.49
91 92 2.138320 CTGTCATTCTCTGTGCGTGTT 58.862 47.619 0.00 0.00 0.00 3.32
92 93 1.866601 TGTCATTCTCTGTGCGTGTTG 59.133 47.619 0.00 0.00 0.00 3.33
93 94 1.195448 GTCATTCTCTGTGCGTGTTGG 59.805 52.381 0.00 0.00 0.00 3.77
94 95 1.202639 TCATTCTCTGTGCGTGTTGGT 60.203 47.619 0.00 0.00 0.00 3.67
95 96 1.069703 CATTCTCTGTGCGTGTTGGTG 60.070 52.381 0.00 0.00 0.00 4.17
96 97 0.107897 TTCTCTGTGCGTGTTGGTGT 60.108 50.000 0.00 0.00 0.00 4.16
97 98 0.107897 TCTCTGTGCGTGTTGGTGTT 60.108 50.000 0.00 0.00 0.00 3.32
98 99 0.732571 CTCTGTGCGTGTTGGTGTTT 59.267 50.000 0.00 0.00 0.00 2.83
99 100 0.449786 TCTGTGCGTGTTGGTGTTTG 59.550 50.000 0.00 0.00 0.00 2.93
100 101 0.525242 CTGTGCGTGTTGGTGTTTGG 60.525 55.000 0.00 0.00 0.00 3.28
101 102 0.960861 TGTGCGTGTTGGTGTTTGGA 60.961 50.000 0.00 0.00 0.00 3.53
102 103 0.383949 GTGCGTGTTGGTGTTTGGAT 59.616 50.000 0.00 0.00 0.00 3.41
103 104 1.107114 TGCGTGTTGGTGTTTGGATT 58.893 45.000 0.00 0.00 0.00 3.01
104 105 1.202348 TGCGTGTTGGTGTTTGGATTG 60.202 47.619 0.00 0.00 0.00 2.67
105 106 1.202359 GCGTGTTGGTGTTTGGATTGT 60.202 47.619 0.00 0.00 0.00 2.71
106 107 2.726633 CGTGTTGGTGTTTGGATTGTC 58.273 47.619 0.00 0.00 0.00 3.18
107 108 2.098280 CGTGTTGGTGTTTGGATTGTCA 59.902 45.455 0.00 0.00 0.00 3.58
108 109 3.443976 GTGTTGGTGTTTGGATTGTCAC 58.556 45.455 0.00 0.00 0.00 3.67
111 112 1.600023 GGTGTTTGGATTGTCACCGA 58.400 50.000 0.00 0.00 40.36 4.69
112 113 1.950909 GGTGTTTGGATTGTCACCGAA 59.049 47.619 0.00 0.00 40.36 4.30
113 114 2.031157 GGTGTTTGGATTGTCACCGAAG 60.031 50.000 0.00 0.00 40.36 3.79
114 115 2.616842 GTGTTTGGATTGTCACCGAAGT 59.383 45.455 0.00 0.00 32.25 3.01
115 116 3.810941 GTGTTTGGATTGTCACCGAAGTA 59.189 43.478 0.00 0.00 32.25 2.24
116 117 3.810941 TGTTTGGATTGTCACCGAAGTAC 59.189 43.478 0.00 0.00 32.25 2.73
117 118 3.755112 TTGGATTGTCACCGAAGTACA 57.245 42.857 0.00 0.00 0.00 2.90
118 119 3.973206 TGGATTGTCACCGAAGTACAT 57.027 42.857 0.00 0.00 0.00 2.29
119 120 3.857052 TGGATTGTCACCGAAGTACATC 58.143 45.455 0.00 0.00 0.00 3.06
120 121 3.195661 GGATTGTCACCGAAGTACATCC 58.804 50.000 0.00 0.00 0.00 3.51
121 122 3.118738 GGATTGTCACCGAAGTACATCCT 60.119 47.826 0.00 0.00 0.00 3.24
122 123 4.098960 GGATTGTCACCGAAGTACATCCTA 59.901 45.833 0.00 0.00 0.00 2.94
123 124 4.713824 TTGTCACCGAAGTACATCCTAG 57.286 45.455 0.00 0.00 0.00 3.02
124 125 3.021695 TGTCACCGAAGTACATCCTAGG 58.978 50.000 0.82 0.82 0.00 3.02
125 126 3.285484 GTCACCGAAGTACATCCTAGGA 58.715 50.000 15.46 15.46 0.00 2.94
126 127 3.698040 GTCACCGAAGTACATCCTAGGAA 59.302 47.826 17.30 0.00 0.00 3.36
127 128 4.341520 GTCACCGAAGTACATCCTAGGAAT 59.658 45.833 17.30 9.90 0.00 3.01
128 129 4.960469 TCACCGAAGTACATCCTAGGAATT 59.040 41.667 17.30 8.18 0.00 2.17
129 130 5.068723 TCACCGAAGTACATCCTAGGAATTC 59.931 44.000 17.30 13.35 0.00 2.17
130 131 5.069251 CACCGAAGTACATCCTAGGAATTCT 59.931 44.000 17.30 7.61 0.00 2.40
131 132 5.661759 ACCGAAGTACATCCTAGGAATTCTT 59.338 40.000 17.30 15.52 0.00 2.52
132 133 6.156429 ACCGAAGTACATCCTAGGAATTCTTT 59.844 38.462 17.30 8.17 0.00 2.52
133 134 6.480320 CCGAAGTACATCCTAGGAATTCTTTG 59.520 42.308 17.30 17.60 0.00 2.77
134 135 6.480320 CGAAGTACATCCTAGGAATTCTTTGG 59.520 42.308 17.30 11.09 0.00 3.28
135 136 6.893020 AGTACATCCTAGGAATTCTTTGGT 57.107 37.500 17.30 6.73 0.00 3.67
136 137 6.890293 AGTACATCCTAGGAATTCTTTGGTC 58.110 40.000 17.30 6.06 0.00 4.02
137 138 5.779241 ACATCCTAGGAATTCTTTGGTCA 57.221 39.130 17.30 0.87 0.00 4.02
138 139 6.332976 ACATCCTAGGAATTCTTTGGTCAT 57.667 37.500 17.30 2.98 0.00 3.06
139 140 6.125029 ACATCCTAGGAATTCTTTGGTCATG 58.875 40.000 17.30 14.67 0.00 3.07
140 141 5.116084 TCCTAGGAATTCTTTGGTCATGG 57.884 43.478 9.71 1.56 0.00 3.66
141 142 3.633986 CCTAGGAATTCTTTGGTCATGGC 59.366 47.826 1.05 0.00 0.00 4.40
142 143 2.460669 AGGAATTCTTTGGTCATGGCC 58.539 47.619 10.20 10.20 0.00 5.36
143 144 1.134946 GGAATTCTTTGGTCATGGCCG 59.865 52.381 12.67 0.00 0.00 6.13
144 145 2.091541 GAATTCTTTGGTCATGGCCGA 58.908 47.619 12.67 7.12 0.00 5.54
145 146 2.214376 ATTCTTTGGTCATGGCCGAA 57.786 45.000 18.20 18.20 0.00 4.30
146 147 1.988293 TTCTTTGGTCATGGCCGAAA 58.012 45.000 19.63 15.12 31.94 3.46
147 148 1.243902 TCTTTGGTCATGGCCGAAAC 58.756 50.000 19.63 0.00 31.94 2.78
148 149 0.958091 CTTTGGTCATGGCCGAAACA 59.042 50.000 19.63 0.00 31.94 2.83
149 150 1.545582 CTTTGGTCATGGCCGAAACAT 59.454 47.619 19.63 0.00 31.94 2.71
150 151 1.626686 TTGGTCATGGCCGAAACATT 58.373 45.000 12.67 0.00 0.00 2.71
151 152 0.887247 TGGTCATGGCCGAAACATTG 59.113 50.000 12.67 0.00 0.00 2.82
152 153 0.173255 GGTCATGGCCGAAACATTGG 59.827 55.000 0.00 0.00 0.00 3.16
153 154 0.887933 GTCATGGCCGAAACATTGGT 59.112 50.000 0.00 0.00 0.00 3.67
156 157 0.608035 ATGGCCGAAACATTGGTCGT 60.608 50.000 0.00 0.00 35.48 4.34
161 162 1.404477 CGAAACATTGGTCGTTTGCC 58.596 50.000 0.00 0.00 36.72 4.52
171 172 4.433186 TGGTCGTTTGCCTTTTGATATG 57.567 40.909 0.00 0.00 0.00 1.78
175 176 4.095782 GTCGTTTGCCTTTTGATATGCCTA 59.904 41.667 0.00 0.00 0.00 3.93
176 177 4.095782 TCGTTTGCCTTTTGATATGCCTAC 59.904 41.667 0.00 0.00 0.00 3.18
180 181 3.318839 TGCCTTTTGATATGCCTACATGC 59.681 43.478 0.00 0.00 37.04 4.06
197 198 0.597568 TGCCAATGCTCTTTTGACGG 59.402 50.000 0.00 0.00 38.71 4.79
198 199 0.881118 GCCAATGCTCTTTTGACGGA 59.119 50.000 0.00 0.00 33.53 4.69
199 200 1.474077 GCCAATGCTCTTTTGACGGAT 59.526 47.619 0.00 0.00 33.53 4.18
201 202 3.012518 CCAATGCTCTTTTGACGGATCT 58.987 45.455 0.00 0.00 0.00 2.75
212 213 7.806690 TCTTTTGACGGATCTAGTTCATTTTG 58.193 34.615 3.30 0.00 0.00 2.44
214 215 6.721571 TTGACGGATCTAGTTCATTTTGTC 57.278 37.500 3.30 3.76 0.00 3.18
230 231 1.375908 GTCGAGCTGATGTTGGCCA 60.376 57.895 0.00 0.00 0.00 5.36
231 232 0.955428 GTCGAGCTGATGTTGGCCAA 60.955 55.000 16.05 16.05 0.00 4.52
253 254 0.815734 CATGGCAAGGGAAAGCTCAG 59.184 55.000 0.00 0.00 0.00 3.35
254 255 0.407139 ATGGCAAGGGAAAGCTCAGT 59.593 50.000 0.00 0.00 0.00 3.41
255 256 0.250901 TGGCAAGGGAAAGCTCAGTC 60.251 55.000 0.00 0.00 0.00 3.51
261 262 4.218417 GCAAGGGAAAGCTCAGTCAAAATA 59.782 41.667 0.00 0.00 0.00 1.40
299 323 2.477176 GGCACGAACCAAGCACACA 61.477 57.895 0.00 0.00 0.00 3.72
301 325 1.355210 CACGAACCAAGCACACACC 59.645 57.895 0.00 0.00 0.00 4.16
302 326 1.078072 ACGAACCAAGCACACACCA 60.078 52.632 0.00 0.00 0.00 4.17
304 328 1.095228 CGAACCAAGCACACACCAGT 61.095 55.000 0.00 0.00 0.00 4.00
333 357 4.056050 GAGTTGTGACGTCTTTGTACCAT 58.944 43.478 17.92 0.00 0.00 3.55
366 395 1.806542 ACTCGATCATTGTGTTGGCAC 59.193 47.619 0.00 0.00 45.44 5.01
392 421 1.826720 TCCTCGCCCGTGTTTATTACT 59.173 47.619 0.00 0.00 0.00 2.24
393 422 1.931172 CCTCGCCCGTGTTTATTACTG 59.069 52.381 0.00 0.00 0.00 2.74
394 423 2.613691 CTCGCCCGTGTTTATTACTGT 58.386 47.619 0.00 0.00 0.00 3.55
395 424 3.429272 CCTCGCCCGTGTTTATTACTGTA 60.429 47.826 0.00 0.00 0.00 2.74
396 425 3.510719 TCGCCCGTGTTTATTACTGTAC 58.489 45.455 0.00 0.00 0.00 2.90
399 428 3.189285 CCCGTGTTTATTACTGTACCCG 58.811 50.000 0.00 0.00 0.00 5.28
418 447 1.390123 CGCAACGATGTGTACTTGGAG 59.610 52.381 0.00 0.00 32.29 3.86
439 468 0.814457 AGAGTTACTCGCCTGCAGAG 59.186 55.000 17.39 7.68 41.27 3.35
446 475 2.010582 CTCGCCTGCAGAGAGGTACC 62.011 65.000 23.20 2.73 37.93 3.34
451 480 4.208686 GCAGAGAGGTACCGCCGG 62.209 72.222 12.54 0.00 43.70 6.13
473 502 1.079405 ACGACGGGGCAAGTATGTG 60.079 57.895 0.00 0.00 0.00 3.21
475 504 2.435938 ACGGGGCAAGTATGTGCG 60.436 61.111 0.00 0.00 45.91 5.34
476 505 2.435938 CGGGGCAAGTATGTGCGT 60.436 61.111 0.00 0.00 45.91 5.24
477 506 1.153529 CGGGGCAAGTATGTGCGTA 60.154 57.895 0.00 0.00 45.91 4.42
478 507 1.426041 CGGGGCAAGTATGTGCGTAC 61.426 60.000 0.00 0.00 45.91 3.67
479 508 0.107848 GGGGCAAGTATGTGCGTACT 60.108 55.000 4.97 0.00 45.91 2.73
481 510 0.921347 GGCAAGTATGTGCGTACTCG 59.079 55.000 4.97 0.00 45.91 4.18
548 604 2.293122 GCTGTCATTTATTATGCCGGCA 59.707 45.455 34.80 34.80 0.00 5.69
587 644 1.526917 GGCCTGAATCCCGTGGATG 60.527 63.158 0.00 0.00 42.27 3.51
588 645 1.526917 GCCTGAATCCCGTGGATGG 60.527 63.158 6.24 5.20 42.27 3.51
589 646 1.983119 GCCTGAATCCCGTGGATGGA 61.983 60.000 6.24 0.00 42.27 3.41
590 647 0.767375 CCTGAATCCCGTGGATGGAT 59.233 55.000 6.24 0.00 42.27 3.41
659 716 1.467342 GTCACGGGACAAGTAAATGGC 59.533 52.381 14.30 0.00 43.73 4.40
699 785 4.524305 GATCGATCGACGGCAGAG 57.476 61.111 22.06 0.00 42.82 3.35
700 786 1.081774 GATCGATCGACGGCAGAGG 60.082 63.158 22.06 0.00 42.82 3.69
703 789 2.771639 CGATCGACGGCAGAGGGAA 61.772 63.158 10.26 0.00 38.46 3.97
705 791 0.806492 GATCGACGGCAGAGGGAAAC 60.806 60.000 0.00 0.00 0.00 2.78
722 817 1.228657 AACGAAAAGCGCTCACTCCC 61.229 55.000 12.06 0.00 46.04 4.30
723 818 1.667830 CGAAAAGCGCTCACTCCCA 60.668 57.895 12.06 0.00 0.00 4.37
724 819 1.869690 GAAAAGCGCTCACTCCCAC 59.130 57.895 12.06 0.00 0.00 4.61
725 820 1.578206 GAAAAGCGCTCACTCCCACC 61.578 60.000 12.06 0.00 0.00 4.61
726 821 3.553095 AAAGCGCTCACTCCCACCC 62.553 63.158 12.06 0.00 0.00 4.61
729 824 4.742201 CGCTCACTCCCACCCACG 62.742 72.222 0.00 0.00 0.00 4.94
781 876 3.311110 ACAGGTGCCGACCACGAT 61.311 61.111 0.00 0.00 45.98 3.73
786 881 4.141965 TGCCGACCACGATCGCAT 62.142 61.111 16.60 0.00 40.87 4.73
787 882 3.630148 GCCGACCACGATCGCATG 61.630 66.667 16.60 6.90 40.87 4.06
788 883 2.961721 CCGACCACGATCGCATGG 60.962 66.667 20.00 20.00 40.87 3.66
871 986 3.592814 GCTTAAATCCCGCGCCCC 61.593 66.667 0.00 0.00 0.00 5.80
872 987 2.905373 CTTAAATCCCGCGCCCCC 60.905 66.667 0.00 0.00 0.00 5.40
896 1013 2.330924 CTTCCTCAATCCCCTCCCGC 62.331 65.000 0.00 0.00 0.00 6.13
913 1030 2.997315 CTCTCCCGCACCACTCCA 60.997 66.667 0.00 0.00 0.00 3.86
914 1031 3.302347 CTCTCCCGCACCACTCCAC 62.302 68.421 0.00 0.00 0.00 4.02
989 1122 0.844661 ACTGTGCCATTACCCCCTCA 60.845 55.000 0.00 0.00 0.00 3.86
996 1139 0.395724 CATTACCCCCTCAGGCCAAC 60.396 60.000 5.01 0.00 0.00 3.77
1355 1531 4.856607 CTCCTCCGCGCGGAAGAC 62.857 72.222 46.15 0.00 44.66 3.01
1525 1719 0.673437 CGCCATTTTGTTGGGTGTCT 59.327 50.000 0.00 0.00 37.24 3.41
1759 1981 1.152383 GGCGAATCGAACCAGCTACC 61.152 60.000 6.91 0.00 0.00 3.18
1784 2011 2.003196 CGGTTCAGCCTCTCTTTCTC 57.997 55.000 0.00 0.00 34.25 2.87
1785 2012 1.548269 CGGTTCAGCCTCTCTTTCTCT 59.452 52.381 0.00 0.00 34.25 3.10
1786 2013 2.673610 CGGTTCAGCCTCTCTTTCTCTG 60.674 54.545 0.00 0.00 34.25 3.35
1787 2014 2.345876 GTTCAGCCTCTCTTTCTCTGC 58.654 52.381 0.00 0.00 0.00 4.26
1788 2015 0.901124 TCAGCCTCTCTTTCTCTGCC 59.099 55.000 0.00 0.00 0.00 4.85
1789 2016 0.612229 CAGCCTCTCTTTCTCTGCCA 59.388 55.000 0.00 0.00 0.00 4.92
1790 2017 1.209990 CAGCCTCTCTTTCTCTGCCAT 59.790 52.381 0.00 0.00 0.00 4.40
1812 2039 2.305928 TGCCAGTGTGTTTGCTTATGT 58.694 42.857 0.00 0.00 0.00 2.29
1867 2098 2.030274 AGTTTGCAAATTCCGTACCAGC 60.030 45.455 16.21 0.00 0.00 4.85
1917 2149 2.434336 TCTTCCACTGCACTTGTACTGT 59.566 45.455 0.00 0.00 0.00 3.55
1953 2185 3.872771 ACTTCCAGCTTGTGCAAAATTTG 59.127 39.130 0.57 0.57 42.74 2.32
1973 2234 4.054780 TGTCTATAATTGGAGTGACGGC 57.945 45.455 0.00 0.00 0.00 5.68
1974 2235 3.050619 GTCTATAATTGGAGTGACGGCG 58.949 50.000 4.80 4.80 0.00 6.46
1975 2236 2.691526 TCTATAATTGGAGTGACGGCGT 59.308 45.455 14.65 14.65 0.00 5.68
1976 2237 1.651987 ATAATTGGAGTGACGGCGTG 58.348 50.000 21.19 0.00 0.00 5.34
1988 2249 2.409651 GGCGTGCTAGAGGAGACG 59.590 66.667 0.00 0.00 34.09 4.18
1990 2251 3.111939 CGTGCTAGAGGAGACGGG 58.888 66.667 0.00 0.00 0.00 5.28
2009 2270 4.342665 ACGGGGAGAAAGAGATGATACTTC 59.657 45.833 0.00 0.00 0.00 3.01
2016 2277 8.134895 GGAGAAAGAGATGATACTTCACAGTAG 58.865 40.741 0.00 0.00 38.96 2.57
2033 2294 1.337387 GTAGAGGCGACAGGTGTATCC 59.663 57.143 0.00 0.00 0.00 2.59
2037 2298 1.518572 GCGACAGGTGTATCCGTGG 60.519 63.158 0.00 0.00 41.99 4.94
2042 2337 2.510691 GGTGTATCCGTGGTGGCG 60.511 66.667 0.00 0.00 37.80 5.69
2043 2338 3.192922 GTGTATCCGTGGTGGCGC 61.193 66.667 0.00 0.00 37.80 6.53
2044 2339 3.696676 TGTATCCGTGGTGGCGCA 61.697 61.111 10.83 0.00 37.80 6.09
2045 2340 2.890474 GTATCCGTGGTGGCGCAG 60.890 66.667 10.83 0.00 37.80 5.18
2046 2341 3.387091 TATCCGTGGTGGCGCAGT 61.387 61.111 10.83 0.00 37.80 4.40
2047 2342 3.657448 TATCCGTGGTGGCGCAGTG 62.657 63.158 10.83 0.00 37.80 3.66
2051 2346 3.121030 GTGGTGGCGCAGTGCTAG 61.121 66.667 14.33 0.00 45.43 3.42
2052 2347 3.625897 TGGTGGCGCAGTGCTAGT 61.626 61.111 14.33 0.00 45.43 2.57
2067 2362 2.499693 TGCTAGTGTGCTACTGCCAATA 59.500 45.455 4.71 0.00 40.65 1.90
2073 2368 5.954335 AGTGTGCTACTGCCAATATTTTTC 58.046 37.500 0.00 0.00 38.49 2.29
2076 2371 6.868339 GTGTGCTACTGCCAATATTTTTCTTT 59.132 34.615 0.00 0.00 38.71 2.52
2077 2372 7.384932 GTGTGCTACTGCCAATATTTTTCTTTT 59.615 33.333 0.00 0.00 38.71 2.27
2080 2404 9.638239 TGCTACTGCCAATATTTTTCTTTTAAG 57.362 29.630 0.00 0.00 38.71 1.85
2106 2436 3.665745 ATTGCCAAGTTGAATGTGGAC 57.334 42.857 3.87 0.00 34.05 4.02
2107 2437 2.064434 TGCCAAGTTGAATGTGGACA 57.936 45.000 3.87 0.00 34.05 4.02
2119 2449 1.152546 GTGGACAAAGGCCTTGGGT 60.153 57.895 24.17 21.86 39.56 4.51
2142 2472 1.077140 TGTGTTGGGCTTGCACTGA 60.077 52.632 0.00 0.00 34.52 3.41
2158 2488 0.178998 CTGAATGGGCCTGGAGGATG 60.179 60.000 4.53 0.00 37.39 3.51
2159 2489 1.152368 GAATGGGCCTGGAGGATGG 59.848 63.158 4.53 0.00 37.39 3.51
2164 2494 3.978164 GCCTGGAGGATGGCTACT 58.022 61.111 0.00 0.00 45.26 2.57
2165 2495 2.225792 GCCTGGAGGATGGCTACTT 58.774 57.895 0.00 0.00 45.26 2.24
2166 2496 0.179034 GCCTGGAGGATGGCTACTTG 60.179 60.000 0.00 0.00 45.26 3.16
2167 2497 0.179034 CCTGGAGGATGGCTACTTGC 60.179 60.000 0.00 0.00 38.07 4.01
2180 2510 2.555199 CTACTTGCCCATGTAGCACTC 58.445 52.381 7.13 0.00 40.69 3.51
2181 2511 0.987294 ACTTGCCCATGTAGCACTCT 59.013 50.000 7.13 0.00 40.69 3.24
2183 2513 2.012673 CTTGCCCATGTAGCACTCTTC 58.987 52.381 7.13 0.00 40.69 2.87
2184 2514 0.983467 TGCCCATGTAGCACTCTTCA 59.017 50.000 3.66 0.00 34.69 3.02
2185 2515 1.339055 TGCCCATGTAGCACTCTTCAC 60.339 52.381 3.66 0.00 34.69 3.18
2187 2517 2.625737 CCCATGTAGCACTCTTCACTG 58.374 52.381 0.00 0.00 0.00 3.66
2188 2518 2.234661 CCCATGTAGCACTCTTCACTGA 59.765 50.000 0.00 0.00 0.00 3.41
2189 2519 3.306989 CCCATGTAGCACTCTTCACTGAA 60.307 47.826 0.00 0.00 0.00 3.02
2190 2520 4.511527 CCATGTAGCACTCTTCACTGAAT 58.488 43.478 0.00 0.00 0.00 2.57
2191 2521 4.331992 CCATGTAGCACTCTTCACTGAATG 59.668 45.833 0.00 0.00 0.00 2.67
2192 2522 3.930336 TGTAGCACTCTTCACTGAATGG 58.070 45.455 0.00 0.00 0.00 3.16
2193 2523 2.486472 AGCACTCTTCACTGAATGGG 57.514 50.000 0.00 0.00 0.00 4.00
2196 2526 2.289945 GCACTCTTCACTGAATGGGTCT 60.290 50.000 0.00 0.00 0.00 3.85
2198 2528 4.499183 CACTCTTCACTGAATGGGTCTAC 58.501 47.826 0.00 0.00 0.00 2.59
2199 2529 4.221703 CACTCTTCACTGAATGGGTCTACT 59.778 45.833 0.00 0.00 0.00 2.57
2200 2530 4.841246 ACTCTTCACTGAATGGGTCTACTT 59.159 41.667 0.00 0.00 0.00 2.24
2201 2531 5.308237 ACTCTTCACTGAATGGGTCTACTTT 59.692 40.000 0.00 0.00 0.00 2.66
2202 2532 6.183361 ACTCTTCACTGAATGGGTCTACTTTT 60.183 38.462 0.00 0.00 0.00 2.27
2203 2533 6.601332 TCTTCACTGAATGGGTCTACTTTTT 58.399 36.000 0.00 0.00 0.00 1.94
2234 2564 2.514458 CCACTGAATGGGCCTACTTT 57.486 50.000 4.53 0.00 45.95 2.66
2242 2572 0.178068 TGGGCCTACTTTCTCATCGC 59.822 55.000 4.53 0.00 0.00 4.58
2245 2575 1.812214 GCCTACTTTCTCATCGCGCG 61.812 60.000 26.76 26.76 0.00 6.86
2247 2577 1.139816 CTACTTTCTCATCGCGCGCA 61.140 55.000 32.61 18.69 0.00 6.09
2248 2578 1.139816 TACTTTCTCATCGCGCGCAG 61.140 55.000 32.61 23.08 0.00 5.18
2249 2579 3.147889 CTTTCTCATCGCGCGCAGG 62.148 63.158 32.61 19.42 0.00 4.85
2250 2580 3.641159 TTTCTCATCGCGCGCAGGA 62.641 57.895 32.61 21.60 0.00 3.86
2251 2581 2.906182 TTTCTCATCGCGCGCAGGAT 62.906 55.000 32.61 22.94 0.00 3.24
2252 2582 2.050077 CTCATCGCGCGCAGGATA 60.050 61.111 32.61 7.09 0.00 2.59
2254 2585 1.880601 CTCATCGCGCGCAGGATAAC 61.881 60.000 32.61 0.00 0.00 1.89
2257 2588 1.087202 ATCGCGCGCAGGATAACAAA 61.087 50.000 32.61 2.78 0.00 2.83
2258 2589 1.296867 CGCGCGCAGGATAACAAAG 60.297 57.895 32.61 5.79 0.00 2.77
2260 2591 0.168128 GCGCGCAGGATAACAAAGTT 59.832 50.000 29.10 0.00 0.00 2.66
2263 2594 2.584791 GCGCAGGATAACAAAGTTGTG 58.415 47.619 0.30 0.00 41.31 3.33
2271 2602 7.308348 GCAGGATAACAAAGTTGTGTTTAGCTA 60.308 37.037 0.00 0.00 41.84 3.32
2283 2614 5.109815 GTGTTTAGCTACACAATCGTACG 57.890 43.478 14.12 9.53 46.00 3.67
2284 2615 4.618489 GTGTTTAGCTACACAATCGTACGT 59.382 41.667 14.12 0.00 46.00 3.57
2285 2616 5.117592 GTGTTTAGCTACACAATCGTACGTT 59.882 40.000 14.12 3.67 46.00 3.99
2286 2617 5.343058 TGTTTAGCTACACAATCGTACGTTC 59.657 40.000 16.05 0.00 0.00 3.95
2287 2618 2.872370 AGCTACACAATCGTACGTTCC 58.128 47.619 16.05 0.00 0.00 3.62
2288 2619 1.922545 GCTACACAATCGTACGTTCCC 59.077 52.381 16.05 0.00 0.00 3.97
2289 2620 2.416431 GCTACACAATCGTACGTTCCCT 60.416 50.000 16.05 0.00 0.00 4.20
2290 2621 3.181497 GCTACACAATCGTACGTTCCCTA 60.181 47.826 16.05 0.00 0.00 3.53
2291 2622 3.940209 ACACAATCGTACGTTCCCTAA 57.060 42.857 16.05 0.00 0.00 2.69
2292 2623 4.255833 ACACAATCGTACGTTCCCTAAA 57.744 40.909 16.05 0.00 0.00 1.85
2293 2624 4.630111 ACACAATCGTACGTTCCCTAAAA 58.370 39.130 16.05 0.00 0.00 1.52
2294 2625 5.055812 ACACAATCGTACGTTCCCTAAAAA 58.944 37.500 16.05 0.00 0.00 1.94
2316 2647 1.203065 GAAACAATCGCGCGTGACA 59.797 52.632 30.98 11.14 0.00 3.58
2321 2652 2.390599 AATCGCGCGTGACATGCTT 61.391 52.632 30.98 12.26 0.00 3.91
2322 2653 2.567470 AATCGCGCGTGACATGCTTG 62.567 55.000 30.98 9.46 0.00 4.01
2329 2660 1.211969 GTGACATGCTTGCTGGCTG 59.788 57.895 0.00 0.00 0.00 4.85
2333 2665 0.250858 ACATGCTTGCTGGCTGTACA 60.251 50.000 0.00 0.00 0.00 2.90
2348 2680 4.278419 GGCTGTACAAAGTTTTCTGTCCAT 59.722 41.667 0.00 0.00 0.00 3.41
2353 2685 6.998074 TGTACAAAGTTTTCTGTCCATGAGAT 59.002 34.615 0.00 0.00 0.00 2.75
2354 2686 6.966534 ACAAAGTTTTCTGTCCATGAGATT 57.033 33.333 0.00 0.00 0.00 2.40
2355 2687 6.974965 ACAAAGTTTTCTGTCCATGAGATTC 58.025 36.000 0.00 0.00 0.00 2.52
2356 2688 6.774656 ACAAAGTTTTCTGTCCATGAGATTCT 59.225 34.615 0.00 0.00 0.00 2.40
2357 2689 7.286316 ACAAAGTTTTCTGTCCATGAGATTCTT 59.714 33.333 0.00 0.00 0.00 2.52
2358 2690 7.446001 AAGTTTTCTGTCCATGAGATTCTTC 57.554 36.000 0.00 0.00 0.00 2.87
2359 2691 5.942826 AGTTTTCTGTCCATGAGATTCTTCC 59.057 40.000 0.00 0.00 0.00 3.46
2360 2692 5.768980 TTTCTGTCCATGAGATTCTTCCT 57.231 39.130 0.00 0.00 0.00 3.36
2361 2693 4.750021 TCTGTCCATGAGATTCTTCCTG 57.250 45.455 0.00 0.00 0.00 3.86
2362 2694 4.099633 TCTGTCCATGAGATTCTTCCTGT 58.900 43.478 0.00 0.00 0.00 4.00
2363 2695 4.081254 TCTGTCCATGAGATTCTTCCTGTG 60.081 45.833 0.00 0.00 0.00 3.66
2364 2696 2.941720 GTCCATGAGATTCTTCCTGTGC 59.058 50.000 0.00 0.00 0.00 4.57
2365 2697 1.938577 CCATGAGATTCTTCCTGTGCG 59.061 52.381 0.00 0.00 0.00 5.34
2367 2699 0.321346 TGAGATTCTTCCTGTGCGCA 59.679 50.000 5.66 5.66 0.00 6.09
2370 2702 1.065926 AGATTCTTCCTGTGCGCATGA 60.066 47.619 15.91 8.40 0.00 3.07
2371 2703 1.945394 GATTCTTCCTGTGCGCATGAT 59.055 47.619 15.91 0.00 0.00 2.45
2377 2709 0.306840 CCTGTGCGCATGATCATGAC 59.693 55.000 34.65 25.45 41.20 3.06
2384 2716 1.197036 CGCATGATCATGACTGATGCC 59.803 52.381 34.65 15.76 42.27 4.40
2386 2718 2.226674 GCATGATCATGACTGATGCCTG 59.773 50.000 34.65 9.75 42.27 4.85
2390 2722 2.885135 TCATGACTGATGCCTGGTTT 57.115 45.000 0.00 0.00 31.32 3.27
2391 2723 2.715046 TCATGACTGATGCCTGGTTTC 58.285 47.619 0.00 0.00 31.32 2.78
2393 2725 2.957402 TGACTGATGCCTGGTTTCTT 57.043 45.000 0.00 0.00 0.00 2.52
2394 2726 2.783135 TGACTGATGCCTGGTTTCTTC 58.217 47.619 0.00 0.00 0.00 2.87
2395 2727 2.373169 TGACTGATGCCTGGTTTCTTCT 59.627 45.455 0.00 0.00 0.00 2.85
2418 2757 2.156098 GACGAATACCCACCTTTTGCA 58.844 47.619 0.00 0.00 0.00 4.08
2421 2760 2.243810 GAATACCCACCTTTTGCACCA 58.756 47.619 0.00 0.00 0.00 4.17
2430 2769 3.820467 CACCTTTTGCACCACTAGAATGA 59.180 43.478 0.00 0.00 0.00 2.57
2434 2773 2.831685 TGCACCACTAGAATGACGTT 57.168 45.000 0.00 0.00 0.00 3.99
2435 2774 2.683968 TGCACCACTAGAATGACGTTC 58.316 47.619 0.00 0.00 37.08 3.95
2436 2775 1.654105 GCACCACTAGAATGACGTTCG 59.346 52.381 0.00 0.00 41.84 3.95
2438 2777 3.314553 CACCACTAGAATGACGTTCGTT 58.685 45.455 0.00 0.00 41.84 3.85
2439 2778 3.739300 CACCACTAGAATGACGTTCGTTT 59.261 43.478 0.00 0.00 41.84 3.60
2440 2779 4.919168 CACCACTAGAATGACGTTCGTTTA 59.081 41.667 0.00 0.00 41.84 2.01
2441 2780 5.575606 CACCACTAGAATGACGTTCGTTTAT 59.424 40.000 0.00 0.00 41.84 1.40
2443 2782 7.274033 CACCACTAGAATGACGTTCGTTTATTA 59.726 37.037 0.00 0.00 41.84 0.98
2444 2783 7.977853 ACCACTAGAATGACGTTCGTTTATTAT 59.022 33.333 0.00 4.49 41.84 1.28
2445 2784 8.266682 CCACTAGAATGACGTTCGTTTATTATG 58.733 37.037 0.00 2.57 41.84 1.90
2446 2785 9.016623 CACTAGAATGACGTTCGTTTATTATGA 57.983 33.333 0.00 0.00 41.84 2.15
2447 2786 9.577110 ACTAGAATGACGTTCGTTTATTATGAA 57.423 29.630 0.00 0.00 41.84 2.57
2448 2787 9.831054 CTAGAATGACGTTCGTTTATTATGAAC 57.169 33.333 1.75 0.00 45.39 3.18
2449 2788 8.475331 AGAATGACGTTCGTTTATTATGAACT 57.525 30.769 1.75 0.00 46.24 3.01
2450 2789 8.932791 AGAATGACGTTCGTTTATTATGAACTT 58.067 29.630 1.75 0.00 46.24 2.66
2451 2790 9.195831 GAATGACGTTCGTTTATTATGAACTTC 57.804 33.333 0.00 8.54 46.24 3.01
2452 2791 7.878477 TGACGTTCGTTTATTATGAACTTCT 57.122 32.000 13.79 0.00 46.24 2.85
2456 2795 8.767085 ACGTTCGTTTATTATGAACTTCTGAAA 58.233 29.630 7.90 0.00 46.24 2.69
2470 2809 5.859521 CTTCTGAAATCTCTGAAGGTGTG 57.140 43.478 7.59 0.00 46.30 3.82
2479 2818 0.535780 CTGAAGGTGTGCAGGCAGAA 60.536 55.000 0.00 0.00 0.00 3.02
2480 2819 0.111061 TGAAGGTGTGCAGGCAGAAT 59.889 50.000 0.00 0.00 0.00 2.40
2486 2825 2.162408 GGTGTGCAGGCAGAATAGAAAC 59.838 50.000 0.00 0.00 0.00 2.78
2496 2835 4.164294 GCAGAATAGAAACAAGCAAGCTG 58.836 43.478 0.00 0.00 0.00 4.24
2500 2839 5.532406 AGAATAGAAACAAGCAAGCTGTCAA 59.468 36.000 0.00 0.00 0.00 3.18
2511 2850 4.082895 AGCAAGCTGTCAAATTCAGATCAC 60.083 41.667 0.00 0.00 35.20 3.06
2517 2856 5.871524 GCTGTCAAATTCAGATCACACTAGA 59.128 40.000 0.00 0.00 35.20 2.43
2518 2857 6.538021 GCTGTCAAATTCAGATCACACTAGAT 59.462 38.462 0.00 0.00 35.20 1.98
2520 2859 7.614494 TGTCAAATTCAGATCACACTAGATGA 58.386 34.615 0.00 0.00 0.00 2.92
2533 2872 0.172578 TAGATGAGAACACACGCGGG 59.827 55.000 6.92 6.92 0.00 6.13
2534 2873 2.047274 ATGAGAACACACGCGGGG 60.047 61.111 15.46 5.78 0.00 5.73
2535 2874 2.501223 GATGAGAACACACGCGGGGA 62.501 60.000 15.46 0.00 0.00 4.81
2536 2875 1.899437 ATGAGAACACACGCGGGGAT 61.899 55.000 15.46 0.00 0.00 3.85
2537 2876 1.252215 TGAGAACACACGCGGGGATA 61.252 55.000 15.46 0.00 0.00 2.59
2538 2877 0.104304 GAGAACACACGCGGGGATAT 59.896 55.000 15.46 0.00 0.00 1.63
2540 2879 1.772063 GAACACACGCGGGGATATGC 61.772 60.000 15.46 0.00 0.00 3.14
2586 2926 4.849310 AGCCACGCACACGGTGTT 62.849 61.111 11.82 0.00 46.04 3.32
2587 2927 4.605967 GCCACGCACACGGTGTTG 62.606 66.667 11.82 9.76 46.04 3.33
2588 2928 4.605967 CCACGCACACGGTGTTGC 62.606 66.667 11.82 16.50 46.04 4.17
2589 2929 3.572539 CACGCACACGGTGTTGCT 61.573 61.111 23.33 13.50 46.04 3.91
2590 2930 2.822255 ACGCACACGGTGTTGCTT 60.822 55.556 23.33 16.34 46.04 3.91
2591 2931 2.352229 CGCACACGGTGTTGCTTG 60.352 61.111 23.33 11.13 35.75 4.01
2592 2932 2.026014 GCACACGGTGTTGCTTGG 59.974 61.111 11.82 0.06 35.75 3.61
2593 2933 2.026014 CACACGGTGTTGCTTGGC 59.974 61.111 11.82 0.00 0.00 4.52
2594 2934 3.216292 ACACGGTGTTGCTTGGCC 61.216 61.111 8.21 0.00 0.00 5.36
2598 2938 4.043200 GGTGTTGCTTGGCCGCTC 62.043 66.667 0.00 0.00 0.00 5.03
2599 2939 4.043200 GTGTTGCTTGGCCGCTCC 62.043 66.667 0.00 0.00 0.00 4.70
2600 2940 4.577677 TGTTGCTTGGCCGCTCCA 62.578 61.111 0.00 0.00 44.85 3.86
2607 2947 2.594303 TGGCCGCTCCAAACTGTG 60.594 61.111 0.00 0.00 43.21 3.66
2608 2948 4.043200 GGCCGCTCCAAACTGTGC 62.043 66.667 0.00 0.00 34.01 4.57
2609 2949 3.286751 GCCGCTCCAAACTGTGCA 61.287 61.111 0.00 0.00 0.00 4.57
2610 2950 2.639286 CCGCTCCAAACTGTGCAC 59.361 61.111 10.75 10.75 0.00 4.57
2611 2951 2.639286 CGCTCCAAACTGTGCACC 59.361 61.111 15.69 0.00 0.00 5.01
2612 2952 2.186160 CGCTCCAAACTGTGCACCA 61.186 57.895 15.69 1.31 0.00 4.17
2613 2953 1.360192 GCTCCAAACTGTGCACCAC 59.640 57.895 15.69 0.00 34.56 4.16
2614 2954 1.383456 GCTCCAAACTGTGCACCACA 61.383 55.000 15.69 0.00 42.45 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.810658 ACATTGATTGCAGTAACTAAGTTCAG 58.189 34.615 0.00 0.00 0.00 3.02
1 2 7.443879 TGACATTGATTGCAGTAACTAAGTTCA 59.556 33.333 0.00 0.00 0.00 3.18
2 3 7.806690 TGACATTGATTGCAGTAACTAAGTTC 58.193 34.615 0.00 0.00 0.00 3.01
3 4 7.744087 TGACATTGATTGCAGTAACTAAGTT 57.256 32.000 0.00 0.00 0.00 2.66
4 5 7.627088 GCATGACATTGATTGCAGTAACTAAGT 60.627 37.037 0.00 0.00 35.22 2.24
5 6 6.690098 GCATGACATTGATTGCAGTAACTAAG 59.310 38.462 0.00 0.00 35.22 2.18
6 7 6.404623 GGCATGACATTGATTGCAGTAACTAA 60.405 38.462 0.00 0.00 36.82 2.24
7 8 5.066375 GGCATGACATTGATTGCAGTAACTA 59.934 40.000 0.00 0.00 36.82 2.24
8 9 4.142315 GGCATGACATTGATTGCAGTAACT 60.142 41.667 0.00 0.00 36.82 2.24
9 10 4.107622 GGCATGACATTGATTGCAGTAAC 58.892 43.478 0.00 0.00 36.82 2.50
10 11 4.018490 AGGCATGACATTGATTGCAGTAA 58.982 39.130 0.00 0.00 36.82 2.24
11 12 3.623703 AGGCATGACATTGATTGCAGTA 58.376 40.909 0.00 0.00 36.82 2.74
12 13 2.453521 AGGCATGACATTGATTGCAGT 58.546 42.857 0.00 0.00 36.82 4.40
13 14 3.881089 TCTAGGCATGACATTGATTGCAG 59.119 43.478 0.00 3.50 36.82 4.41
14 15 3.888583 TCTAGGCATGACATTGATTGCA 58.111 40.909 0.00 0.00 36.82 4.08
15 16 4.795268 CATCTAGGCATGACATTGATTGC 58.205 43.478 0.00 0.00 0.00 3.56
16 17 4.277423 TGCATCTAGGCATGACATTGATTG 59.723 41.667 0.00 0.00 39.25 2.67
17 18 4.277672 GTGCATCTAGGCATGACATTGATT 59.722 41.667 0.00 0.00 46.92 2.57
18 19 3.819337 GTGCATCTAGGCATGACATTGAT 59.181 43.478 0.00 0.00 46.92 2.57
19 20 3.208594 GTGCATCTAGGCATGACATTGA 58.791 45.455 0.00 0.00 46.92 2.57
20 21 2.292569 GGTGCATCTAGGCATGACATTG 59.707 50.000 0.00 0.00 46.92 2.82
21 22 2.092267 TGGTGCATCTAGGCATGACATT 60.092 45.455 0.00 0.00 46.92 2.71
22 23 1.491754 TGGTGCATCTAGGCATGACAT 59.508 47.619 0.00 0.00 46.92 3.06
23 24 0.911053 TGGTGCATCTAGGCATGACA 59.089 50.000 0.00 0.00 46.92 3.58
24 25 1.134280 ACTGGTGCATCTAGGCATGAC 60.134 52.381 0.00 0.00 46.92 3.06
25 26 1.206878 ACTGGTGCATCTAGGCATGA 58.793 50.000 0.00 0.00 46.92 3.07
26 27 2.158914 TGTACTGGTGCATCTAGGCATG 60.159 50.000 0.00 0.00 46.92 4.06
27 28 2.103771 CTGTACTGGTGCATCTAGGCAT 59.896 50.000 0.00 0.00 46.92 4.40
28 29 1.482182 CTGTACTGGTGCATCTAGGCA 59.518 52.381 0.00 0.00 42.53 4.75
29 30 1.202580 CCTGTACTGGTGCATCTAGGC 60.203 57.143 10.53 0.00 0.00 3.93
30 31 1.202580 GCCTGTACTGGTGCATCTAGG 60.203 57.143 18.89 2.71 0.00 3.02
31 32 1.536922 CGCCTGTACTGGTGCATCTAG 60.537 57.143 18.00 0.00 0.00 2.43
32 33 0.459899 CGCCTGTACTGGTGCATCTA 59.540 55.000 18.00 0.00 0.00 1.98
33 34 1.219124 CGCCTGTACTGGTGCATCT 59.781 57.895 18.00 0.00 0.00 2.90
34 35 0.179073 ATCGCCTGTACTGGTGCATC 60.179 55.000 23.47 5.56 37.51 3.91
35 36 0.462581 CATCGCCTGTACTGGTGCAT 60.463 55.000 23.47 15.85 37.51 3.96
36 37 1.079197 CATCGCCTGTACTGGTGCA 60.079 57.895 23.47 14.55 37.51 4.57
37 38 1.815421 CCATCGCCTGTACTGGTGC 60.815 63.158 23.47 8.79 37.51 5.01
38 39 1.815421 GCCATCGCCTGTACTGGTG 60.815 63.158 22.57 22.57 38.85 4.17
39 40 1.626356 ATGCCATCGCCTGTACTGGT 61.626 55.000 18.89 0.00 0.00 4.00
40 41 1.146930 ATGCCATCGCCTGTACTGG 59.853 57.895 14.18 14.18 0.00 4.00
41 42 1.162181 CCATGCCATCGCCTGTACTG 61.162 60.000 0.00 0.00 0.00 2.74
42 43 1.146930 CCATGCCATCGCCTGTACT 59.853 57.895 0.00 0.00 0.00 2.73
43 44 2.546494 GCCATGCCATCGCCTGTAC 61.546 63.158 0.00 0.00 0.00 2.90
44 45 2.203195 GCCATGCCATCGCCTGTA 60.203 61.111 0.00 0.00 0.00 2.74
45 46 4.119363 AGCCATGCCATCGCCTGT 62.119 61.111 0.00 0.00 0.00 4.00
46 47 3.592814 CAGCCATGCCATCGCCTG 61.593 66.667 0.00 0.00 0.00 4.85
47 48 3.129362 ATCAGCCATGCCATCGCCT 62.129 57.895 0.00 0.00 0.00 5.52
48 49 2.596631 ATCAGCCATGCCATCGCC 60.597 61.111 0.00 0.00 0.00 5.54
49 50 2.643272 CATCAGCCATGCCATCGC 59.357 61.111 0.00 0.00 0.00 4.58
56 57 1.725557 GACAGCCTGCATCAGCCATG 61.726 60.000 0.00 0.00 41.13 3.66
57 58 1.453379 GACAGCCTGCATCAGCCAT 60.453 57.895 0.00 0.00 41.13 4.40
58 59 2.045634 GACAGCCTGCATCAGCCA 60.046 61.111 0.00 0.00 41.13 4.75
59 60 1.035932 AATGACAGCCTGCATCAGCC 61.036 55.000 0.00 0.00 41.13 4.85
60 61 0.381089 GAATGACAGCCTGCATCAGC 59.619 55.000 0.00 0.00 42.57 4.26
61 62 1.941294 GAGAATGACAGCCTGCATCAG 59.059 52.381 0.00 0.00 0.00 2.90
62 63 1.558294 AGAGAATGACAGCCTGCATCA 59.442 47.619 0.00 0.00 0.00 3.07
63 64 1.941294 CAGAGAATGACAGCCTGCATC 59.059 52.381 0.00 0.00 0.00 3.91
64 65 1.281287 ACAGAGAATGACAGCCTGCAT 59.719 47.619 0.00 0.00 0.00 3.96
65 66 0.689055 ACAGAGAATGACAGCCTGCA 59.311 50.000 0.00 0.00 0.00 4.41
66 67 1.085091 CACAGAGAATGACAGCCTGC 58.915 55.000 0.00 0.00 0.00 4.85
67 68 1.085091 GCACAGAGAATGACAGCCTG 58.915 55.000 0.00 0.00 0.00 4.85
68 69 0.390866 CGCACAGAGAATGACAGCCT 60.391 55.000 0.00 0.00 0.00 4.58
69 70 0.671781 ACGCACAGAGAATGACAGCC 60.672 55.000 0.00 0.00 0.00 4.85
70 71 0.441533 CACGCACAGAGAATGACAGC 59.558 55.000 0.00 0.00 0.00 4.40
71 72 1.788258 ACACGCACAGAGAATGACAG 58.212 50.000 0.00 0.00 0.00 3.51
72 73 1.866601 CAACACGCACAGAGAATGACA 59.133 47.619 0.00 0.00 0.00 3.58
73 74 1.195448 CCAACACGCACAGAGAATGAC 59.805 52.381 0.00 0.00 0.00 3.06
74 75 1.202639 ACCAACACGCACAGAGAATGA 60.203 47.619 0.00 0.00 0.00 2.57
75 76 1.069703 CACCAACACGCACAGAGAATG 60.070 52.381 0.00 0.00 0.00 2.67
76 77 1.229428 CACCAACACGCACAGAGAAT 58.771 50.000 0.00 0.00 0.00 2.40
77 78 0.107897 ACACCAACACGCACAGAGAA 60.108 50.000 0.00 0.00 0.00 2.87
78 79 0.107897 AACACCAACACGCACAGAGA 60.108 50.000 0.00 0.00 0.00 3.10
79 80 0.732571 AAACACCAACACGCACAGAG 59.267 50.000 0.00 0.00 0.00 3.35
80 81 0.449786 CAAACACCAACACGCACAGA 59.550 50.000 0.00 0.00 0.00 3.41
81 82 0.525242 CCAAACACCAACACGCACAG 60.525 55.000 0.00 0.00 0.00 3.66
82 83 0.960861 TCCAAACACCAACACGCACA 60.961 50.000 0.00 0.00 0.00 4.57
83 84 0.383949 ATCCAAACACCAACACGCAC 59.616 50.000 0.00 0.00 0.00 5.34
84 85 1.107114 AATCCAAACACCAACACGCA 58.893 45.000 0.00 0.00 0.00 5.24
85 86 1.202359 ACAATCCAAACACCAACACGC 60.202 47.619 0.00 0.00 0.00 5.34
86 87 2.098280 TGACAATCCAAACACCAACACG 59.902 45.455 0.00 0.00 0.00 4.49
87 88 3.443976 GTGACAATCCAAACACCAACAC 58.556 45.455 0.00 0.00 0.00 3.32
88 89 3.791973 GTGACAATCCAAACACCAACA 57.208 42.857 0.00 0.00 0.00 3.33
92 93 1.600023 TCGGTGACAATCCAAACACC 58.400 50.000 0.00 0.00 46.16 4.16
93 94 2.616842 ACTTCGGTGACAATCCAAACAC 59.383 45.455 0.00 0.00 0.00 3.32
94 95 2.925724 ACTTCGGTGACAATCCAAACA 58.074 42.857 0.00 0.00 0.00 2.83
95 96 3.810941 TGTACTTCGGTGACAATCCAAAC 59.189 43.478 0.00 0.00 0.00 2.93
96 97 4.074627 TGTACTTCGGTGACAATCCAAA 57.925 40.909 0.00 0.00 0.00 3.28
97 98 3.755112 TGTACTTCGGTGACAATCCAA 57.245 42.857 0.00 0.00 0.00 3.53
98 99 3.369052 GGATGTACTTCGGTGACAATCCA 60.369 47.826 2.93 0.00 0.00 3.41
99 100 3.118738 AGGATGTACTTCGGTGACAATCC 60.119 47.826 2.93 0.00 0.00 3.01
100 101 4.124851 AGGATGTACTTCGGTGACAATC 57.875 45.455 2.93 0.00 0.00 2.67
101 102 4.099573 CCTAGGATGTACTTCGGTGACAAT 59.900 45.833 1.05 0.00 0.00 2.71
102 103 3.446161 CCTAGGATGTACTTCGGTGACAA 59.554 47.826 1.05 0.00 0.00 3.18
103 104 3.021695 CCTAGGATGTACTTCGGTGACA 58.978 50.000 1.05 0.00 0.00 3.58
104 105 3.285484 TCCTAGGATGTACTTCGGTGAC 58.715 50.000 7.62 0.00 0.00 3.67
105 106 3.657398 TCCTAGGATGTACTTCGGTGA 57.343 47.619 7.62 0.00 0.00 4.02
106 107 4.939052 ATTCCTAGGATGTACTTCGGTG 57.061 45.455 13.57 0.00 0.00 4.94
107 108 5.209659 AGAATTCCTAGGATGTACTTCGGT 58.790 41.667 13.57 0.00 0.00 4.69
108 109 5.793030 AGAATTCCTAGGATGTACTTCGG 57.207 43.478 13.57 0.00 0.00 4.30
109 110 6.480320 CCAAAGAATTCCTAGGATGTACTTCG 59.520 42.308 13.57 5.99 0.00 3.79
110 111 7.339482 ACCAAAGAATTCCTAGGATGTACTTC 58.661 38.462 13.57 10.61 0.00 3.01
111 112 7.037586 TGACCAAAGAATTCCTAGGATGTACTT 60.038 37.037 13.57 12.70 0.00 2.24
112 113 6.443849 TGACCAAAGAATTCCTAGGATGTACT 59.556 38.462 13.57 7.33 0.00 2.73
113 114 6.650120 TGACCAAAGAATTCCTAGGATGTAC 58.350 40.000 13.57 5.07 0.00 2.90
114 115 6.884472 TGACCAAAGAATTCCTAGGATGTA 57.116 37.500 13.57 0.00 0.00 2.29
115 116 5.779241 TGACCAAAGAATTCCTAGGATGT 57.221 39.130 13.57 2.99 0.00 3.06
116 117 5.533903 CCATGACCAAAGAATTCCTAGGATG 59.466 44.000 13.57 6.56 0.00 3.51
117 118 5.699143 CCATGACCAAAGAATTCCTAGGAT 58.301 41.667 13.57 0.00 0.00 3.24
118 119 4.628715 GCCATGACCAAAGAATTCCTAGGA 60.629 45.833 7.62 7.62 0.00 2.94
119 120 3.633986 GCCATGACCAAAGAATTCCTAGG 59.366 47.826 0.82 0.82 0.00 3.02
120 121 3.633986 GGCCATGACCAAAGAATTCCTAG 59.366 47.826 0.00 0.00 0.00 3.02
121 122 3.631250 GGCCATGACCAAAGAATTCCTA 58.369 45.455 0.00 0.00 0.00 2.94
122 123 2.460669 GGCCATGACCAAAGAATTCCT 58.539 47.619 0.00 0.00 0.00 3.36
123 124 1.134946 CGGCCATGACCAAAGAATTCC 59.865 52.381 2.24 0.00 0.00 3.01
124 125 2.091541 TCGGCCATGACCAAAGAATTC 58.908 47.619 2.24 0.00 0.00 2.17
125 126 2.214376 TCGGCCATGACCAAAGAATT 57.786 45.000 2.24 0.00 0.00 2.17
126 127 2.214376 TTCGGCCATGACCAAAGAAT 57.786 45.000 2.24 0.00 0.00 2.40
127 128 1.611491 GTTTCGGCCATGACCAAAGAA 59.389 47.619 2.24 0.00 0.00 2.52
128 129 1.243902 GTTTCGGCCATGACCAAAGA 58.756 50.000 2.24 0.00 0.00 2.52
129 130 0.958091 TGTTTCGGCCATGACCAAAG 59.042 50.000 2.24 0.00 0.00 2.77
130 131 1.626686 ATGTTTCGGCCATGACCAAA 58.373 45.000 2.24 0.00 0.00 3.28
131 132 1.271934 CAATGTTTCGGCCATGACCAA 59.728 47.619 2.24 0.00 0.00 3.67
132 133 0.887247 CAATGTTTCGGCCATGACCA 59.113 50.000 2.24 0.00 0.00 4.02
133 134 0.173255 CCAATGTTTCGGCCATGACC 59.827 55.000 2.24 0.00 0.00 4.02
134 135 0.887933 ACCAATGTTTCGGCCATGAC 59.112 50.000 2.24 0.00 0.00 3.06
135 136 1.173043 GACCAATGTTTCGGCCATGA 58.827 50.000 2.24 0.00 0.00 3.07
136 137 0.179166 CGACCAATGTTTCGGCCATG 60.179 55.000 2.24 0.00 0.00 3.66
137 138 0.608035 ACGACCAATGTTTCGGCCAT 60.608 50.000 2.24 0.00 39.63 4.40
138 139 0.820074 AACGACCAATGTTTCGGCCA 60.820 50.000 2.24 0.00 39.63 5.36
139 140 0.312729 AAACGACCAATGTTTCGGCC 59.687 50.000 0.00 0.00 39.63 6.13
140 141 1.404477 CAAACGACCAATGTTTCGGC 58.596 50.000 6.48 0.00 37.44 5.54
141 142 1.404477 GCAAACGACCAATGTTTCGG 58.596 50.000 6.48 0.00 37.44 4.30
142 143 1.001815 AGGCAAACGACCAATGTTTCG 60.002 47.619 0.00 0.67 37.44 3.46
143 144 2.793278 AGGCAAACGACCAATGTTTC 57.207 45.000 0.00 0.00 37.44 2.78
144 145 3.535280 AAAGGCAAACGACCAATGTTT 57.465 38.095 0.00 0.00 40.01 2.83
145 146 3.118956 TCAAAAGGCAAACGACCAATGTT 60.119 39.130 0.00 0.00 0.00 2.71
146 147 2.428890 TCAAAAGGCAAACGACCAATGT 59.571 40.909 0.00 0.00 0.00 2.71
147 148 3.090952 TCAAAAGGCAAACGACCAATG 57.909 42.857 0.00 0.00 0.00 2.82
148 149 5.410067 CATATCAAAAGGCAAACGACCAAT 58.590 37.500 0.00 0.00 0.00 3.16
149 150 4.804108 CATATCAAAAGGCAAACGACCAA 58.196 39.130 0.00 0.00 0.00 3.67
150 151 3.366883 GCATATCAAAAGGCAAACGACCA 60.367 43.478 0.00 0.00 0.00 4.02
151 152 3.179048 GCATATCAAAAGGCAAACGACC 58.821 45.455 0.00 0.00 0.00 4.79
152 153 3.119495 AGGCATATCAAAAGGCAAACGAC 60.119 43.478 0.00 0.00 0.00 4.34
153 154 3.088532 AGGCATATCAAAAGGCAAACGA 58.911 40.909 0.00 0.00 0.00 3.85
156 157 5.681954 GCATGTAGGCATATCAAAAGGCAAA 60.682 40.000 0.00 0.00 33.30 3.68
171 172 1.396653 AAGAGCATTGGCATGTAGGC 58.603 50.000 0.00 0.00 44.61 3.93
175 176 2.352030 CGTCAAAAGAGCATTGGCATGT 60.352 45.455 0.00 0.00 44.61 3.21
176 177 2.256174 CGTCAAAAGAGCATTGGCATG 58.744 47.619 0.00 0.00 44.61 4.06
180 181 3.012518 AGATCCGTCAAAAGAGCATTGG 58.987 45.455 0.00 0.00 0.00 3.16
197 198 5.807520 TCAGCTCGACAAAATGAACTAGATC 59.192 40.000 0.00 0.00 0.00 2.75
198 199 5.724328 TCAGCTCGACAAAATGAACTAGAT 58.276 37.500 0.00 0.00 0.00 1.98
199 200 5.134202 TCAGCTCGACAAAATGAACTAGA 57.866 39.130 0.00 0.00 0.00 2.43
201 202 5.237815 ACATCAGCTCGACAAAATGAACTA 58.762 37.500 0.00 0.00 0.00 2.24
212 213 0.955428 TTGGCCAACATCAGCTCGAC 60.955 55.000 16.05 0.00 0.00 4.20
214 215 0.813184 AATTGGCCAACATCAGCTCG 59.187 50.000 23.27 0.00 0.00 5.03
230 231 2.498885 GAGCTTTCCCTTGCCATGAATT 59.501 45.455 0.00 0.00 0.00 2.17
231 232 2.105766 GAGCTTTCCCTTGCCATGAAT 58.894 47.619 0.00 0.00 0.00 2.57
243 244 6.691508 ACCAAATATTTTGACTGAGCTTTCC 58.308 36.000 6.29 0.00 0.00 3.13
253 254 8.357290 ACTTTACCCCTACCAAATATTTTGAC 57.643 34.615 6.29 0.00 0.00 3.18
254 255 8.808092 CAACTTTACCCCTACCAAATATTTTGA 58.192 33.333 6.29 0.00 0.00 2.69
255 256 8.038351 CCAACTTTACCCCTACCAAATATTTTG 58.962 37.037 0.00 0.00 0.00 2.44
261 262 3.820119 GCCCAACTTTACCCCTACCAAAT 60.820 47.826 0.00 0.00 0.00 2.32
299 323 1.065491 TCACAACTCACAAGCACTGGT 60.065 47.619 0.00 0.00 0.00 4.00
301 325 1.004610 CGTCACAACTCACAAGCACTG 60.005 52.381 0.00 0.00 0.00 3.66
302 326 1.290203 CGTCACAACTCACAAGCACT 58.710 50.000 0.00 0.00 0.00 4.40
304 328 1.134818 AGACGTCACAACTCACAAGCA 60.135 47.619 19.50 0.00 0.00 3.91
305 329 1.571919 AGACGTCACAACTCACAAGC 58.428 50.000 19.50 0.00 0.00 4.01
307 331 3.331150 ACAAAGACGTCACAACTCACAA 58.669 40.909 19.50 0.00 0.00 3.33
308 332 2.967362 ACAAAGACGTCACAACTCACA 58.033 42.857 19.50 0.00 0.00 3.58
309 333 3.244579 GGTACAAAGACGTCACAACTCAC 59.755 47.826 19.50 6.29 0.00 3.51
310 334 3.119065 TGGTACAAAGACGTCACAACTCA 60.119 43.478 19.50 4.92 31.92 3.41
311 335 3.450578 TGGTACAAAGACGTCACAACTC 58.549 45.455 19.50 3.92 31.92 3.01
312 336 3.530265 TGGTACAAAGACGTCACAACT 57.470 42.857 19.50 0.00 31.92 3.16
333 357 1.476891 GATCGAGTGTGGCCTCTGTTA 59.523 52.381 3.32 0.00 0.00 2.41
378 407 3.189285 CGGGTACAGTAATAAACACGGG 58.811 50.000 0.00 0.00 35.18 5.28
392 421 0.602060 TACACATCGTTGCGGGTACA 59.398 50.000 0.00 0.00 0.00 2.90
393 422 0.994263 GTACACATCGTTGCGGGTAC 59.006 55.000 7.49 7.49 0.00 3.34
394 423 0.889994 AGTACACATCGTTGCGGGTA 59.110 50.000 0.00 0.00 0.00 3.69
395 424 0.034337 AAGTACACATCGTTGCGGGT 59.966 50.000 0.00 0.00 0.00 5.28
396 425 0.442310 CAAGTACACATCGTTGCGGG 59.558 55.000 0.00 0.00 0.00 6.13
399 428 1.128692 GCTCCAAGTACACATCGTTGC 59.871 52.381 0.00 0.00 0.00 4.17
418 447 3.787458 GCAGGCGAGTAACTCTGC 58.213 61.111 0.00 0.00 44.34 4.26
451 480 3.869473 TACTTGCCCCGTCGTGCAC 62.869 63.158 6.82 6.82 37.18 4.57
462 491 0.921347 CGAGTACGCACATACTTGCC 59.079 55.000 0.00 0.00 39.53 4.52
473 502 0.376502 GAGTGGAGTACCGAGTACGC 59.623 60.000 8.63 8.63 43.05 4.42
475 504 1.742268 GTGGAGTGGAGTACCGAGTAC 59.258 57.143 6.19 6.19 39.10 2.73
476 505 1.676916 CGTGGAGTGGAGTACCGAGTA 60.677 57.143 0.00 0.00 39.42 2.59
477 506 0.959372 CGTGGAGTGGAGTACCGAGT 60.959 60.000 0.00 0.00 39.42 4.18
478 507 1.654954 CCGTGGAGTGGAGTACCGAG 61.655 65.000 0.00 0.00 39.42 4.63
479 508 1.676635 CCGTGGAGTGGAGTACCGA 60.677 63.158 0.00 0.00 39.42 4.69
481 510 1.946475 GAGCCGTGGAGTGGAGTACC 61.946 65.000 0.00 0.00 0.00 3.34
548 604 2.621055 CGTTAGGCTAGATCTGCTGACT 59.379 50.000 5.18 5.67 0.00 3.41
587 644 0.039978 ATCATCGCTCGTCGTCATCC 60.040 55.000 0.00 0.00 39.67 3.51
588 645 1.048494 CATCATCGCTCGTCGTCATC 58.952 55.000 0.00 0.00 39.67 2.92
589 646 0.663153 TCATCATCGCTCGTCGTCAT 59.337 50.000 0.00 0.00 39.67 3.06
590 647 0.663153 ATCATCATCGCTCGTCGTCA 59.337 50.000 0.00 0.00 39.67 4.35
659 716 3.406361 GTCGCTGTGCTGTGACGG 61.406 66.667 6.94 0.00 37.65 4.79
660 717 3.406361 GGTCGCTGTGCTGTGACG 61.406 66.667 13.71 0.00 45.36 4.35
692 778 0.517316 CTTTTCGTTTCCCTCTGCCG 59.483 55.000 0.00 0.00 0.00 5.69
693 779 0.241213 GCTTTTCGTTTCCCTCTGCC 59.759 55.000 0.00 0.00 0.00 4.85
694 780 0.110192 CGCTTTTCGTTTCCCTCTGC 60.110 55.000 0.00 0.00 0.00 4.26
696 782 0.250338 AGCGCTTTTCGTTTCCCTCT 60.250 50.000 2.64 0.00 41.07 3.69
697 783 0.166161 GAGCGCTTTTCGTTTCCCTC 59.834 55.000 13.26 0.00 41.07 4.30
698 784 0.534203 TGAGCGCTTTTCGTTTCCCT 60.534 50.000 13.26 0.00 41.07 4.20
699 785 0.385598 GTGAGCGCTTTTCGTTTCCC 60.386 55.000 13.26 0.00 41.07 3.97
700 786 0.586802 AGTGAGCGCTTTTCGTTTCC 59.413 50.000 13.26 0.00 41.07 3.13
703 789 1.228657 GGGAGTGAGCGCTTTTCGTT 61.229 55.000 13.26 0.00 41.07 3.85
705 791 1.667830 TGGGAGTGAGCGCTTTTCG 60.668 57.895 13.26 0.00 42.12 3.46
781 876 1.750018 CACTTGGCCATCCATGCGA 60.750 57.895 6.09 0.00 43.05 5.10
786 881 1.614711 GATCCCACTTGGCCATCCA 59.385 57.895 6.09 0.00 41.55 3.41
787 882 1.152673 GGATCCCACTTGGCCATCC 60.153 63.158 6.09 4.56 36.54 3.51
788 883 1.152673 GGGATCCCACTTGGCCATC 60.153 63.158 26.95 0.00 35.81 3.51
871 986 0.553333 GGGGATTGAGGAAGAAGGGG 59.447 60.000 0.00 0.00 0.00 4.79
872 987 1.492599 GAGGGGATTGAGGAAGAAGGG 59.507 57.143 0.00 0.00 0.00 3.95
884 999 2.446802 GGAGAGCGGGAGGGGATT 60.447 66.667 0.00 0.00 0.00 3.01
896 1013 2.997315 TGGAGTGGTGCGGGAGAG 60.997 66.667 0.00 0.00 0.00 3.20
913 1030 5.832060 GGAATTCAGGATTGATTGATGGAGT 59.168 40.000 7.93 0.00 32.27 3.85
914 1031 6.016192 CAGGAATTCAGGATTGATTGATGGAG 60.016 42.308 7.93 0.00 32.27 3.86
1450 1633 3.000080 GCGTGACAGAGAAACGGCG 62.000 63.158 4.80 4.80 37.77 6.46
1525 1719 2.102420 TCTTCTTCCACGTCTGAGCAAA 59.898 45.455 0.00 0.00 0.00 3.68
1620 1814 2.109181 GGCAGGGTGATCGGCTAC 59.891 66.667 0.00 0.00 0.00 3.58
1652 1858 1.523938 GGCTATCAACCCCGAGCAC 60.524 63.158 0.00 0.00 36.63 4.40
1774 2001 3.761311 GCAAATGGCAGAGAAAGAGAG 57.239 47.619 0.00 0.00 43.97 3.20
1786 2013 1.219646 CAAACACACTGGCAAATGGC 58.780 50.000 0.00 0.00 43.74 4.40
1787 2014 1.202557 AGCAAACACACTGGCAAATGG 60.203 47.619 3.70 0.00 0.00 3.16
1788 2015 2.228138 AGCAAACACACTGGCAAATG 57.772 45.000 0.00 0.00 0.00 2.32
1789 2016 2.985957 AAGCAAACACACTGGCAAAT 57.014 40.000 0.00 0.00 0.00 2.32
1790 2017 3.131933 ACATAAGCAAACACACTGGCAAA 59.868 39.130 0.00 0.00 0.00 3.68
1812 2039 2.487762 GTGGTGGCGATGAAGAAATGAA 59.512 45.455 0.00 0.00 0.00 2.57
1867 2098 7.792374 AATCCAATTGGCATATAGTATAGCG 57.208 36.000 20.33 0.00 34.44 4.26
1917 2149 7.232127 ACAAGCTGGAAGTAAACAGTAGTAGTA 59.768 37.037 0.00 0.00 37.07 1.82
1953 2185 3.050619 CGCCGTCACTCCAATTATAGAC 58.949 50.000 0.00 0.00 0.00 2.59
1973 2234 2.482333 CCCCGTCTCCTCTAGCACG 61.482 68.421 0.00 0.00 0.00 5.34
1974 2235 1.076923 TCCCCGTCTCCTCTAGCAC 60.077 63.158 0.00 0.00 0.00 4.40
1975 2236 1.227664 CTCCCCGTCTCCTCTAGCA 59.772 63.158 0.00 0.00 0.00 3.49
1976 2237 0.106619 TTCTCCCCGTCTCCTCTAGC 60.107 60.000 0.00 0.00 0.00 3.42
1988 2249 5.129485 TGTGAAGTATCATCTCTTTCTCCCC 59.871 44.000 0.00 0.00 38.01 4.81
1990 2251 6.872920 ACTGTGAAGTATCATCTCTTTCTCC 58.127 40.000 0.00 0.00 38.01 3.71
2009 2270 0.109086 CACCTGTCGCCTCTACTGTG 60.109 60.000 0.00 0.00 0.00 3.66
2016 2277 1.065928 CGGATACACCTGTCGCCTC 59.934 63.158 0.00 0.00 36.31 4.70
2037 2298 2.357517 ACACTAGCACTGCGCCAC 60.358 61.111 4.18 0.00 44.04 5.01
2042 2337 1.354040 CAGTAGCACACTAGCACTGC 58.646 55.000 0.00 0.00 37.09 4.40
2043 2338 1.354040 GCAGTAGCACACTAGCACTG 58.646 55.000 11.46 11.46 41.86 3.66
2044 2339 0.247736 GGCAGTAGCACACTAGCACT 59.752 55.000 11.82 0.00 44.61 4.40
2045 2340 0.037326 TGGCAGTAGCACACTAGCAC 60.037 55.000 11.82 0.00 44.61 4.40
2046 2341 0.684535 TTGGCAGTAGCACACTAGCA 59.315 50.000 11.82 0.00 44.61 3.49
2047 2342 2.029838 ATTGGCAGTAGCACACTAGC 57.970 50.000 0.00 0.00 44.61 3.42
2048 2343 6.683974 AAAATATTGGCAGTAGCACACTAG 57.316 37.500 0.00 0.00 44.61 2.57
2049 2344 6.884295 AGAAAAATATTGGCAGTAGCACACTA 59.116 34.615 0.00 0.00 44.61 2.74
2050 2345 5.711976 AGAAAAATATTGGCAGTAGCACACT 59.288 36.000 0.00 0.00 44.61 3.55
2051 2346 5.954335 AGAAAAATATTGGCAGTAGCACAC 58.046 37.500 0.00 0.00 44.61 3.82
2052 2347 6.588719 AAGAAAAATATTGGCAGTAGCACA 57.411 33.333 0.00 0.00 44.61 4.57
2067 2362 8.900983 TGGCAATAGCAACTTAAAAGAAAAAT 57.099 26.923 0.00 0.00 44.61 1.82
2073 2368 6.922957 TCAACTTGGCAATAGCAACTTAAAAG 59.077 34.615 0.00 0.00 44.61 2.27
2076 2371 6.398234 TTCAACTTGGCAATAGCAACTTAA 57.602 33.333 0.00 0.00 44.61 1.85
2077 2372 6.015519 ACATTCAACTTGGCAATAGCAACTTA 60.016 34.615 0.00 0.00 44.61 2.24
2080 2404 4.386652 CACATTCAACTTGGCAATAGCAAC 59.613 41.667 0.00 0.00 44.61 4.17
2106 2436 1.209261 ACACAAAACCCAAGGCCTTTG 59.791 47.619 17.61 13.20 35.92 2.77
2107 2437 1.209261 CACACAAAACCCAAGGCCTTT 59.791 47.619 17.61 0.00 0.00 3.11
2119 2449 0.610174 TGCAAGCCCAACACACAAAA 59.390 45.000 0.00 0.00 0.00 2.44
2142 2472 3.078843 GCCATCCTCCAGGCCCATT 62.079 63.158 0.00 0.00 45.18 3.16
2161 2491 2.187958 AGAGTGCTACATGGGCAAGTA 58.812 47.619 15.36 0.00 41.54 2.24
2162 2492 0.987294 AGAGTGCTACATGGGCAAGT 59.013 50.000 15.36 7.68 41.54 3.16
2163 2493 2.012673 GAAGAGTGCTACATGGGCAAG 58.987 52.381 15.36 0.54 41.54 4.01
2164 2494 1.350684 TGAAGAGTGCTACATGGGCAA 59.649 47.619 15.36 0.00 41.54 4.52
2165 2495 0.983467 TGAAGAGTGCTACATGGGCA 59.017 50.000 10.80 10.80 37.36 5.36
2166 2496 1.065854 AGTGAAGAGTGCTACATGGGC 60.066 52.381 0.00 1.45 0.00 5.36
2167 2497 2.234661 TCAGTGAAGAGTGCTACATGGG 59.765 50.000 0.00 0.00 0.00 4.00
2169 2499 4.331992 CCATTCAGTGAAGAGTGCTACATG 59.668 45.833 11.91 0.62 0.00 3.21
2170 2500 4.511527 CCATTCAGTGAAGAGTGCTACAT 58.488 43.478 11.91 0.00 0.00 2.29
2171 2501 3.306989 CCCATTCAGTGAAGAGTGCTACA 60.307 47.826 11.91 0.00 0.00 2.74
2172 2502 3.265791 CCCATTCAGTGAAGAGTGCTAC 58.734 50.000 11.91 0.00 0.00 3.58
2173 2503 2.906389 ACCCATTCAGTGAAGAGTGCTA 59.094 45.455 11.91 0.00 0.00 3.49
2174 2504 1.701847 ACCCATTCAGTGAAGAGTGCT 59.298 47.619 11.91 0.00 0.00 4.40
2175 2505 2.079925 GACCCATTCAGTGAAGAGTGC 58.920 52.381 11.91 0.00 0.00 4.40
2176 2506 3.692257 AGACCCATTCAGTGAAGAGTG 57.308 47.619 11.91 4.92 0.00 3.51
2177 2507 4.421131 AGTAGACCCATTCAGTGAAGAGT 58.579 43.478 11.91 8.17 0.00 3.24
2178 2508 5.413309 AAGTAGACCCATTCAGTGAAGAG 57.587 43.478 11.91 6.43 0.00 2.85
2180 2510 6.884280 AAAAAGTAGACCCATTCAGTGAAG 57.116 37.500 11.91 0.34 0.00 3.02
2216 2546 3.274288 GAGAAAGTAGGCCCATTCAGTG 58.726 50.000 0.00 0.00 0.00 3.66
2217 2547 2.912956 TGAGAAAGTAGGCCCATTCAGT 59.087 45.455 0.00 0.00 0.00 3.41
2218 2548 3.634397 TGAGAAAGTAGGCCCATTCAG 57.366 47.619 0.00 0.00 0.00 3.02
2219 2549 3.432186 CGATGAGAAAGTAGGCCCATTCA 60.432 47.826 0.00 0.00 0.00 2.57
2220 2550 3.134458 CGATGAGAAAGTAGGCCCATTC 58.866 50.000 0.00 0.00 0.00 2.67
2221 2551 2.746472 GCGATGAGAAAGTAGGCCCATT 60.746 50.000 0.00 0.00 0.00 3.16
2222 2552 1.202698 GCGATGAGAAAGTAGGCCCAT 60.203 52.381 0.00 0.00 0.00 4.00
2224 2554 0.876342 CGCGATGAGAAAGTAGGCCC 60.876 60.000 0.00 0.00 0.00 5.80
2227 2557 1.812214 GCGCGCGATGAGAAAGTAGG 61.812 60.000 37.18 0.00 0.00 3.18
2234 2564 2.070654 TTATCCTGCGCGCGATGAGA 62.071 55.000 37.18 23.32 0.00 3.27
2242 2572 1.196808 ACAACTTTGTTATCCTGCGCG 59.803 47.619 0.00 0.00 38.47 6.86
2245 2575 5.629435 GCTAAACACAACTTTGTTATCCTGC 59.371 40.000 0.00 0.00 38.82 4.85
2247 2577 7.717875 TGTAGCTAAACACAACTTTGTTATCCT 59.282 33.333 0.00 0.00 38.82 3.24
2248 2578 7.867752 TGTAGCTAAACACAACTTTGTTATCC 58.132 34.615 0.00 0.00 38.82 2.59
2263 2594 5.220098 GGAACGTACGATTGTGTAGCTAAAC 60.220 44.000 24.41 7.15 0.00 2.01
2271 2602 3.940209 TTAGGGAACGTACGATTGTGT 57.060 42.857 24.41 4.21 0.00 3.72
2293 2624 1.778591 CACGCGCGATTGTTTCTTTTT 59.221 42.857 39.36 5.70 0.00 1.94
2294 2625 1.003331 TCACGCGCGATTGTTTCTTTT 60.003 42.857 39.36 5.95 0.00 2.27
2295 2626 0.584396 TCACGCGCGATTGTTTCTTT 59.416 45.000 39.36 6.60 0.00 2.52
2296 2627 0.110823 GTCACGCGCGATTGTTTCTT 60.111 50.000 39.36 7.53 0.00 2.52
2297 2628 1.218875 TGTCACGCGCGATTGTTTCT 61.219 50.000 39.36 8.45 0.00 2.52
2298 2629 0.179225 ATGTCACGCGCGATTGTTTC 60.179 50.000 39.36 18.53 0.00 2.78
2299 2630 0.452618 CATGTCACGCGCGATTGTTT 60.453 50.000 39.36 10.31 0.00 2.83
2300 2631 1.132436 CATGTCACGCGCGATTGTT 59.868 52.632 39.36 11.25 0.00 2.83
2301 2632 2.778026 CATGTCACGCGCGATTGT 59.222 55.556 39.36 11.73 0.00 2.71
2302 2633 2.567470 AAGCATGTCACGCGCGATTG 62.567 55.000 39.36 25.60 0.00 2.67
2303 2634 2.390599 AAGCATGTCACGCGCGATT 61.391 52.632 39.36 13.15 0.00 3.34
2304 2635 2.815211 AAGCATGTCACGCGCGAT 60.815 55.556 39.36 17.31 0.00 4.58
2305 2636 3.776849 CAAGCATGTCACGCGCGA 61.777 61.111 39.36 15.38 0.00 5.87
2307 2638 4.093952 AGCAAGCATGTCACGCGC 62.094 61.111 5.73 0.00 0.00 6.86
2308 2639 2.202260 CAGCAAGCATGTCACGCG 60.202 61.111 3.53 3.53 0.00 6.01
2309 2640 2.177531 CCAGCAAGCATGTCACGC 59.822 61.111 0.00 0.00 0.00 5.34
2316 2647 1.542915 CTTTGTACAGCCAGCAAGCAT 59.457 47.619 0.00 0.00 34.23 3.79
2321 2652 3.066621 CAGAAAACTTTGTACAGCCAGCA 59.933 43.478 0.00 0.00 0.00 4.41
2322 2653 3.066760 ACAGAAAACTTTGTACAGCCAGC 59.933 43.478 0.00 0.00 0.00 4.85
2329 2660 6.861065 TCTCATGGACAGAAAACTTTGTAC 57.139 37.500 0.00 0.00 0.00 2.90
2333 2665 7.040132 GGAAGAATCTCATGGACAGAAAACTTT 60.040 37.037 0.00 0.00 0.00 2.66
2348 2680 0.321346 TGCGCACAGGAAGAATCTCA 59.679 50.000 5.66 0.00 0.00 3.27
2353 2685 1.338960 TGATCATGCGCACAGGAAGAA 60.339 47.619 14.90 0.00 40.51 2.52
2354 2686 0.249955 TGATCATGCGCACAGGAAGA 59.750 50.000 14.90 4.47 40.51 2.87
2355 2687 1.002792 CATGATCATGCGCACAGGAAG 60.003 52.381 22.20 0.00 40.51 3.46
2356 2688 1.018910 CATGATCATGCGCACAGGAA 58.981 50.000 22.20 0.00 40.51 3.36
2357 2689 0.178533 TCATGATCATGCGCACAGGA 59.821 50.000 27.68 11.07 41.53 3.86
2358 2690 0.306840 GTCATGATCATGCGCACAGG 59.693 55.000 27.68 8.36 38.65 4.00
2359 2691 1.003866 CAGTCATGATCATGCGCACAG 60.004 52.381 27.68 15.30 38.65 3.66
2360 2692 1.011333 CAGTCATGATCATGCGCACA 58.989 50.000 27.68 6.55 38.65 4.57
2361 2693 1.292992 TCAGTCATGATCATGCGCAC 58.707 50.000 27.68 20.83 38.65 5.34
2362 2694 1.871039 CATCAGTCATGATCATGCGCA 59.129 47.619 27.68 14.96 44.58 6.09
2363 2695 1.399855 GCATCAGTCATGATCATGCGC 60.400 52.381 27.68 21.71 44.58 6.09
2364 2696 1.197036 GGCATCAGTCATGATCATGCG 59.803 52.381 27.68 18.66 44.58 4.73
2365 2697 2.226674 CAGGCATCAGTCATGATCATGC 59.773 50.000 27.68 21.90 44.58 4.06
2367 2699 2.442126 ACCAGGCATCAGTCATGATCAT 59.558 45.455 1.18 1.18 44.58 2.45
2371 2703 2.306805 AGAAACCAGGCATCAGTCATGA 59.693 45.455 0.00 0.00 40.50 3.07
2377 2709 2.363683 GGAGAAGAAACCAGGCATCAG 58.636 52.381 0.00 0.00 0.00 2.90
2390 2722 1.747355 GTGGGTATTCGTCGGAGAAGA 59.253 52.381 0.00 0.00 44.50 2.87
2391 2723 1.202382 GGTGGGTATTCGTCGGAGAAG 60.202 57.143 0.00 0.00 39.69 2.85
2393 2725 0.033796 AGGTGGGTATTCGTCGGAGA 60.034 55.000 0.00 0.00 0.00 3.71
2394 2726 0.822164 AAGGTGGGTATTCGTCGGAG 59.178 55.000 0.00 0.00 0.00 4.63
2395 2727 1.269012 AAAGGTGGGTATTCGTCGGA 58.731 50.000 0.00 0.00 0.00 4.55
2418 2757 3.655276 AACGAACGTCATTCTAGTGGT 57.345 42.857 0.00 0.00 34.88 4.16
2421 2760 9.577110 TTCATAATAAACGAACGTCATTCTAGT 57.423 29.630 0.00 0.00 34.88 2.57
2430 2769 7.878477 TCAGAAGTTCATAATAAACGAACGT 57.122 32.000 5.50 0.00 43.00 3.99
2440 2779 9.393512 CCTTCAGAGATTTCAGAAGTTCATAAT 57.606 33.333 14.67 1.58 42.33 1.28
2441 2780 8.378565 ACCTTCAGAGATTTCAGAAGTTCATAA 58.621 33.333 14.67 0.00 42.33 1.90
2443 2782 6.654161 CACCTTCAGAGATTTCAGAAGTTCAT 59.346 38.462 14.67 0.00 42.33 2.57
2444 2783 5.994054 CACCTTCAGAGATTTCAGAAGTTCA 59.006 40.000 14.67 0.00 42.33 3.18
2445 2784 5.994668 ACACCTTCAGAGATTTCAGAAGTTC 59.005 40.000 14.67 0.00 42.33 3.01
2446 2785 5.762218 CACACCTTCAGAGATTTCAGAAGTT 59.238 40.000 14.67 1.10 42.33 2.66
2447 2786 5.303971 CACACCTTCAGAGATTTCAGAAGT 58.696 41.667 14.67 3.75 42.33 3.01
2448 2787 4.153835 GCACACCTTCAGAGATTTCAGAAG 59.846 45.833 10.43 10.43 43.06 2.85
2449 2788 4.067896 GCACACCTTCAGAGATTTCAGAA 58.932 43.478 0.00 0.00 0.00 3.02
2450 2789 3.071457 TGCACACCTTCAGAGATTTCAGA 59.929 43.478 0.00 0.00 0.00 3.27
2451 2790 3.405831 TGCACACCTTCAGAGATTTCAG 58.594 45.455 0.00 0.00 0.00 3.02
2452 2791 3.405831 CTGCACACCTTCAGAGATTTCA 58.594 45.455 0.00 0.00 32.26 2.69
2456 2795 0.035630 GCCTGCACACCTTCAGAGAT 60.036 55.000 0.00 0.00 32.26 2.75
2470 2809 2.489329 TGCTTGTTTCTATTCTGCCTGC 59.511 45.455 0.00 0.00 0.00 4.85
2479 2818 5.772825 TTTGACAGCTTGCTTGTTTCTAT 57.227 34.783 0.00 0.00 0.00 1.98
2480 2819 5.772825 ATTTGACAGCTTGCTTGTTTCTA 57.227 34.783 0.00 0.00 0.00 2.10
2486 2825 4.233123 TCTGAATTTGACAGCTTGCTTG 57.767 40.909 0.00 0.00 35.61 4.01
2496 2835 7.978414 TCTCATCTAGTGTGATCTGAATTTGAC 59.022 37.037 0.00 0.00 0.00 3.18
2500 2839 7.763528 GTGTTCTCATCTAGTGTGATCTGAATT 59.236 37.037 0.00 0.00 31.03 2.17
2511 2850 1.914051 CGCGTGTGTTCTCATCTAGTG 59.086 52.381 0.00 0.00 0.00 2.74
2517 2856 1.899437 ATCCCCGCGTGTGTTCTCAT 61.899 55.000 4.92 0.00 0.00 2.90
2518 2857 1.252215 TATCCCCGCGTGTGTTCTCA 61.252 55.000 4.92 0.00 0.00 3.27
2520 2859 0.179084 CATATCCCCGCGTGTGTTCT 60.179 55.000 4.92 0.00 0.00 3.01
2569 2909 4.849310 AACACCGTGTGCGTGGCT 62.849 61.111 4.57 0.00 36.98 4.75
2570 2910 4.605967 CAACACCGTGTGCGTGGC 62.606 66.667 4.57 0.00 36.98 5.01
2571 2911 4.605967 GCAACACCGTGTGCGTGG 62.606 66.667 4.57 0.00 36.98 4.94
2572 2912 3.107104 AAGCAACACCGTGTGCGTG 62.107 57.895 4.57 1.03 36.98 5.34
2573 2913 2.822255 AAGCAACACCGTGTGCGT 60.822 55.556 4.57 6.80 36.98 5.24
2574 2914 2.352229 CAAGCAACACCGTGTGCG 60.352 61.111 4.57 0.87 36.98 5.34
2575 2915 2.026014 CCAAGCAACACCGTGTGC 59.974 61.111 4.57 10.91 36.98 4.57
2576 2916 2.026014 GCCAAGCAACACCGTGTG 59.974 61.111 4.57 1.05 39.75 3.82
2577 2917 3.216292 GGCCAAGCAACACCGTGT 61.216 61.111 0.00 0.00 0.00 4.49
2578 2918 4.326766 CGGCCAAGCAACACCGTG 62.327 66.667 2.24 0.00 40.77 4.94
2581 2921 4.043200 GAGCGGCCAAGCAACACC 62.043 66.667 2.24 0.00 40.15 4.16
2582 2922 4.043200 GGAGCGGCCAAGCAACAC 62.043 66.667 2.24 0.00 40.15 3.32
2583 2923 4.577677 TGGAGCGGCCAAGCAACA 62.578 61.111 2.24 0.00 45.87 3.33
2591 2931 4.043200 GCACAGTTTGGAGCGGCC 62.043 66.667 0.00 0.00 37.10 6.13
2592 2932 3.286751 TGCACAGTTTGGAGCGGC 61.287 61.111 0.00 0.00 0.00 6.53
2593 2933 2.639286 GTGCACAGTTTGGAGCGG 59.361 61.111 13.17 0.00 0.00 5.52
2594 2934 2.186160 TGGTGCACAGTTTGGAGCG 61.186 57.895 20.43 0.00 46.47 5.03
2595 2935 1.360192 GTGGTGCACAGTTTGGAGC 59.640 57.895 20.43 0.00 43.94 4.70
2596 2936 2.792500 TGTGGTGCACAGTTTGGAG 58.208 52.632 20.43 0.00 39.62 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.