Multiple sequence alignment - TraesCS4D01G317000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G317000 chr4D 100.000 6992 0 0 1 6992 482167946 482160955 0.000000e+00 12912.0
1 TraesCS4D01G317000 chr4D 93.684 95 6 0 6898 6992 509819051 509818957 7.310000e-30 143.0
2 TraesCS4D01G317000 chr4B 95.776 6108 160 33 630 6698 611861733 611855685 0.000000e+00 9760.0
3 TraesCS4D01G317000 chr4B 94.545 110 6 0 6801 6910 611855642 611855533 3.350000e-38 171.0
4 TraesCS4D01G317000 chr4B 81.429 140 16 6 6578 6715 615248407 615248538 9.590000e-19 106.0
5 TraesCS4D01G317000 chr5A 91.632 5055 313 43 1558 6572 660436011 660440995 0.000000e+00 6890.0
6 TraesCS4D01G317000 chr5A 89.294 906 58 15 630 1515 660435120 660436006 0.000000e+00 1099.0
7 TraesCS4D01G317000 chr5A 88.506 348 38 2 193 539 660434575 660434921 3.020000e-113 420.0
8 TraesCS4D01G317000 chr5A 89.344 244 21 4 6223 6465 661659714 661659475 1.140000e-77 302.0
9 TraesCS4D01G317000 chr5A 93.401 197 13 0 1 197 660428978 660429174 6.860000e-75 292.0
10 TraesCS4D01G317000 chr7D 87.266 267 23 8 6214 6475 480002851 480003111 1.910000e-75 294.0
11 TraesCS4D01G317000 chr7D 85.978 271 34 4 6213 6481 363048931 363048663 3.190000e-73 287.0
12 TraesCS4D01G317000 chr7D 80.469 128 16 5 6581 6707 125907756 125907637 9.660000e-14 89.8
13 TraesCS4D01G317000 chrUn 86.567 268 31 5 6215 6480 23111037 23110773 2.470000e-74 291.0
14 TraesCS4D01G317000 chr2D 86.347 271 32 5 6214 6481 56643394 56643662 2.470000e-74 291.0
15 TraesCS4D01G317000 chr2D 86.466 266 32 4 6222 6485 485982856 485982593 8.870000e-74 289.0
16 TraesCS4D01G317000 chr2D 98.851 87 1 0 6906 6992 315487138 315487052 9.390000e-34 156.0
17 TraesCS4D01G317000 chr2D 92.233 103 6 2 6892 6992 270843858 270843960 2.030000e-30 145.0
18 TraesCS4D01G317000 chr7B 86.347 271 27 8 6214 6481 505937574 505937837 3.190000e-73 287.0
19 TraesCS4D01G317000 chr6D 98.851 87 1 0 6906 6992 286634347 286634261 9.390000e-34 156.0
20 TraesCS4D01G317000 chr6D 97.727 88 2 0 6905 6992 397169460 397169373 1.210000e-32 152.0
21 TraesCS4D01G317000 chr6D 95.652 92 4 0 6901 6992 413401277 413401368 1.570000e-31 148.0
22 TraesCS4D01G317000 chr6D 95.652 92 4 0 6901 6992 413967935 413967844 1.570000e-31 148.0
23 TraesCS4D01G317000 chr6D 79.856 139 17 6 6570 6708 459736378 459736505 2.690000e-14 91.6
24 TraesCS4D01G317000 chr1D 96.703 91 2 1 6902 6992 208825672 208825761 4.370000e-32 150.0
25 TraesCS4D01G317000 chr3D 97.590 83 2 0 6909 6991 527682958 527682876 7.310000e-30 143.0
26 TraesCS4D01G317000 chr3D 83.459 133 15 3 6575 6707 413670248 413670373 4.430000e-22 117.0
27 TraesCS4D01G317000 chr3B 81.560 141 16 6 6575 6715 501422512 501422382 2.670000e-19 108.0
28 TraesCS4D01G317000 chr7A 88.608 79 3 2 6572 6650 509466206 509466134 2.690000e-14 91.6
29 TraesCS4D01G317000 chr2B 82.178 101 9 7 6563 6661 111423757 111423850 2.090000e-10 78.7
30 TraesCS4D01G317000 chr1A 79.661 118 16 3 6581 6697 483198515 483198405 2.090000e-10 78.7
31 TraesCS4D01G317000 chr6B 83.951 81 7 2 6589 6669 675628133 675628059 9.730000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G317000 chr4D 482160955 482167946 6991 True 12912.0 12912 100.000000 1 6992 1 chr4D.!!$R1 6991
1 TraesCS4D01G317000 chr4B 611855533 611861733 6200 True 4965.5 9760 95.160500 630 6910 2 chr4B.!!$R1 6280
2 TraesCS4D01G317000 chr5A 660434575 660440995 6420 False 2803.0 6890 89.810667 193 6572 3 chr5A.!!$F2 6379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 198 0.031994 AAAGGTTGAACCATGTGCGC 59.968 50.000 17.83 0.0 41.95 6.09 F
609 696 0.036952 ACGGCTGTGAACATCTCAGG 60.037 55.000 0.00 0.0 38.16 3.86 F
610 697 0.247460 CGGCTGTGAACATCTCAGGA 59.753 55.000 10.40 0.0 38.16 3.86 F
1284 1419 0.535335 TACTCGGCATTCCAGTCACC 59.465 55.000 0.00 0.0 0.00 4.02 F
2790 2973 1.202452 AGAACTGCAAGCAAAACAGCC 60.202 47.619 0.00 0.0 37.60 4.85 F
4372 4568 1.813513 ATCTGGAAACTGAACTGCGG 58.186 50.000 0.00 0.0 41.93 5.69 F
5084 5281 0.304705 GATGATGCCCGTGTAAAGCG 59.695 55.000 0.00 0.0 0.00 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 2019 0.111061 AAACAGGCACAGGCTCATCA 59.889 50.000 0.0 0.0 40.87 3.07 R
2484 2665 0.179225 GAACATGCGGTGTAGTTGCG 60.179 55.000 0.0 0.0 41.14 4.85 R
2679 2862 3.645053 AGATCATGGAGATACAGGGGT 57.355 47.619 0.0 0.0 37.00 4.95 R
2862 3045 1.140312 AACCCTGTGATATGCGGGAT 58.860 50.000 0.0 0.0 39.08 3.85 R
4603 4800 0.468771 GCCCCTCAAAGGATGGATGG 60.469 60.000 0.0 0.0 37.67 3.51 R
5175 5372 0.665670 CCTGCTGCTCGGTCATATCG 60.666 60.000 0.0 0.0 0.00 2.92 R
6742 6954 0.250901 TTCAGCTTGTTCAGGGAGCC 60.251 55.000 0.0 0.0 37.11 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.629079 CAAATCCAACCTGACCTTAAGTC 57.371 43.478 0.97 0.32 46.51 3.01
23 24 5.316987 CAAATCCAACCTGACCTTAAGTCT 58.683 41.667 0.97 0.00 46.46 3.24
24 25 4.828072 ATCCAACCTGACCTTAAGTCTC 57.172 45.455 0.97 0.00 46.46 3.36
25 26 3.583228 TCCAACCTGACCTTAAGTCTCA 58.417 45.455 0.97 1.17 46.46 3.27
26 27 3.971305 TCCAACCTGACCTTAAGTCTCAA 59.029 43.478 0.97 0.00 46.46 3.02
27 28 4.410883 TCCAACCTGACCTTAAGTCTCAAA 59.589 41.667 0.97 0.00 46.46 2.69
28 29 5.073144 TCCAACCTGACCTTAAGTCTCAAAT 59.927 40.000 0.97 0.00 46.46 2.32
29 30 5.412904 CCAACCTGACCTTAAGTCTCAAATC 59.587 44.000 0.97 0.00 46.46 2.17
30 31 5.167303 ACCTGACCTTAAGTCTCAAATCC 57.833 43.478 0.97 0.00 46.46 3.01
31 32 4.597507 ACCTGACCTTAAGTCTCAAATCCA 59.402 41.667 0.97 0.00 46.46 3.41
32 33 5.073144 ACCTGACCTTAAGTCTCAAATCCAA 59.927 40.000 0.97 0.00 46.46 3.53
33 34 6.183347 CCTGACCTTAAGTCTCAAATCCAAT 58.817 40.000 0.97 0.00 46.46 3.16
34 35 7.037586 ACCTGACCTTAAGTCTCAAATCCAATA 60.038 37.037 0.97 0.00 46.46 1.90
35 36 7.829211 CCTGACCTTAAGTCTCAAATCCAATAA 59.171 37.037 0.97 0.00 46.46 1.40
36 37 9.401058 CTGACCTTAAGTCTCAAATCCAATAAT 57.599 33.333 0.97 0.00 46.46 1.28
44 45 8.757982 AGTCTCAAATCCAATAATAATGCAGT 57.242 30.769 0.00 0.00 0.00 4.40
45 46 8.627403 AGTCTCAAATCCAATAATAATGCAGTG 58.373 33.333 0.00 0.00 0.00 3.66
46 47 8.623903 GTCTCAAATCCAATAATAATGCAGTGA 58.376 33.333 0.00 0.00 0.00 3.41
47 48 9.358406 TCTCAAATCCAATAATAATGCAGTGAT 57.642 29.630 0.00 0.00 0.00 3.06
48 49 9.406828 CTCAAATCCAATAATAATGCAGTGATG 57.593 33.333 0.00 0.00 0.00 3.07
49 50 8.361889 TCAAATCCAATAATAATGCAGTGATGG 58.638 33.333 0.00 0.00 0.00 3.51
50 51 8.361889 CAAATCCAATAATAATGCAGTGATGGA 58.638 33.333 0.00 3.90 38.66 3.41
51 52 7.698506 ATCCAATAATAATGCAGTGATGGAG 57.301 36.000 0.00 0.00 37.80 3.86
52 53 6.840527 TCCAATAATAATGCAGTGATGGAGA 58.159 36.000 0.00 0.00 31.26 3.71
53 54 6.938596 TCCAATAATAATGCAGTGATGGAGAG 59.061 38.462 0.00 0.00 31.26 3.20
54 55 6.150641 CCAATAATAATGCAGTGATGGAGAGG 59.849 42.308 0.00 0.00 0.00 3.69
55 56 6.692849 ATAATAATGCAGTGATGGAGAGGA 57.307 37.500 0.00 0.00 0.00 3.71
56 57 4.620589 ATAATGCAGTGATGGAGAGGAG 57.379 45.455 0.00 0.00 0.00 3.69
57 58 1.876849 ATGCAGTGATGGAGAGGAGT 58.123 50.000 0.00 0.00 0.00 3.85
58 59 1.189752 TGCAGTGATGGAGAGGAGTC 58.810 55.000 0.00 0.00 0.00 3.36
59 60 1.189752 GCAGTGATGGAGAGGAGTCA 58.810 55.000 0.00 0.00 0.00 3.41
60 61 1.552337 GCAGTGATGGAGAGGAGTCAA 59.448 52.381 0.00 0.00 0.00 3.18
61 62 2.418471 GCAGTGATGGAGAGGAGTCAAG 60.418 54.545 0.00 0.00 0.00 3.02
62 63 2.168106 CAGTGATGGAGAGGAGTCAAGG 59.832 54.545 0.00 0.00 0.00 3.61
63 64 2.183679 GTGATGGAGAGGAGTCAAGGT 58.816 52.381 0.00 0.00 0.00 3.50
64 65 2.093764 GTGATGGAGAGGAGTCAAGGTG 60.094 54.545 0.00 0.00 0.00 4.00
65 66 2.225369 TGATGGAGAGGAGTCAAGGTGA 60.225 50.000 0.00 0.00 0.00 4.02
77 78 3.476552 GTCAAGGTGACAGATCAAACCA 58.523 45.455 3.52 0.00 46.22 3.67
78 79 3.251004 GTCAAGGTGACAGATCAAACCAC 59.749 47.826 3.52 0.00 46.22 4.16
79 80 2.554032 CAAGGTGACAGATCAAACCACC 59.446 50.000 14.74 14.74 45.57 4.61
80 81 1.073923 AGGTGACAGATCAAACCACCC 59.926 52.381 17.35 0.95 46.19 4.61
81 82 1.202879 GGTGACAGATCAAACCACCCA 60.203 52.381 12.67 0.00 40.90 4.51
82 83 2.582052 GTGACAGATCAAACCACCCAA 58.418 47.619 0.00 0.00 36.31 4.12
83 84 2.554032 GTGACAGATCAAACCACCCAAG 59.446 50.000 0.00 0.00 36.31 3.61
84 85 2.162681 GACAGATCAAACCACCCAAGG 58.837 52.381 0.00 0.00 0.00 3.61
85 86 1.203050 ACAGATCAAACCACCCAAGGG 60.203 52.381 2.91 2.91 42.03 3.95
95 96 2.037847 CCCAAGGGGCCTTCAAGG 59.962 66.667 0.84 0.00 35.35 3.61
96 97 2.037847 CCAAGGGGCCTTCAAGGG 59.962 66.667 5.33 0.00 35.37 3.95
97 98 2.037847 CAAGGGGCCTTCAAGGGG 59.962 66.667 5.33 0.00 35.37 4.79
98 99 2.454511 AAGGGGCCTTCAAGGGGT 60.455 61.111 5.33 0.00 35.37 4.95
99 100 1.151452 AAGGGGCCTTCAAGGGGTA 60.151 57.895 5.33 0.00 35.37 3.69
100 101 1.506907 AAGGGGCCTTCAAGGGGTAC 61.507 60.000 5.33 0.00 35.37 3.34
114 115 3.403936 GGTACCACCATCTGCCATC 57.596 57.895 7.15 0.00 38.42 3.51
115 116 0.839946 GGTACCACCATCTGCCATCT 59.160 55.000 7.15 0.00 38.42 2.90
116 117 1.212935 GGTACCACCATCTGCCATCTT 59.787 52.381 7.15 0.00 38.42 2.40
117 118 2.292267 GTACCACCATCTGCCATCTTG 58.708 52.381 0.00 0.00 0.00 3.02
118 119 0.700564 ACCACCATCTGCCATCTTGT 59.299 50.000 0.00 0.00 0.00 3.16
119 120 1.100510 CCACCATCTGCCATCTTGTG 58.899 55.000 0.00 0.00 0.00 3.33
120 121 1.615116 CCACCATCTGCCATCTTGTGT 60.615 52.381 0.00 0.00 0.00 3.72
121 122 1.471287 CACCATCTGCCATCTTGTGTG 59.529 52.381 0.00 0.00 0.00 3.82
122 123 1.074405 ACCATCTGCCATCTTGTGTGT 59.926 47.619 0.00 0.00 0.00 3.72
123 124 1.471287 CCATCTGCCATCTTGTGTGTG 59.529 52.381 0.00 0.00 0.00 3.82
124 125 1.471287 CATCTGCCATCTTGTGTGTGG 59.529 52.381 0.00 0.00 36.09 4.17
125 126 0.764271 TCTGCCATCTTGTGTGTGGA 59.236 50.000 0.00 0.00 34.94 4.02
126 127 1.142667 TCTGCCATCTTGTGTGTGGAA 59.857 47.619 0.00 0.00 34.94 3.53
127 128 2.165167 CTGCCATCTTGTGTGTGGAAT 58.835 47.619 0.00 0.00 34.94 3.01
128 129 1.887854 TGCCATCTTGTGTGTGGAATG 59.112 47.619 0.00 0.00 34.94 2.67
129 130 2.161855 GCCATCTTGTGTGTGGAATGA 58.838 47.619 0.00 0.00 34.94 2.57
130 131 2.557924 GCCATCTTGTGTGTGGAATGAA 59.442 45.455 0.00 0.00 34.94 2.57
131 132 3.366679 GCCATCTTGTGTGTGGAATGAAG 60.367 47.826 0.00 0.00 34.94 3.02
132 133 4.074259 CCATCTTGTGTGTGGAATGAAGA 58.926 43.478 0.00 0.00 34.94 2.87
133 134 4.083110 CCATCTTGTGTGTGGAATGAAGAC 60.083 45.833 0.00 0.00 34.94 3.01
134 135 3.476552 TCTTGTGTGTGGAATGAAGACC 58.523 45.455 0.00 0.00 0.00 3.85
135 136 3.136443 TCTTGTGTGTGGAATGAAGACCT 59.864 43.478 0.00 0.00 0.00 3.85
136 137 3.126001 TGTGTGTGGAATGAAGACCTC 57.874 47.619 0.00 0.00 0.00 3.85
137 138 2.069273 GTGTGTGGAATGAAGACCTCG 58.931 52.381 0.00 0.00 0.00 4.63
138 139 1.967779 TGTGTGGAATGAAGACCTCGA 59.032 47.619 0.00 0.00 0.00 4.04
139 140 2.029020 TGTGTGGAATGAAGACCTCGAG 60.029 50.000 5.13 5.13 0.00 4.04
140 141 1.550524 TGTGGAATGAAGACCTCGAGG 59.449 52.381 30.11 30.11 42.17 4.63
151 152 4.436998 CTCGAGGTGGTGGGCGTC 62.437 72.222 3.91 0.00 0.00 5.19
153 154 4.082523 CGAGGTGGTGGGCGTCAT 62.083 66.667 0.00 0.00 0.00 3.06
154 155 2.436646 GAGGTGGTGGGCGTCATG 60.437 66.667 0.00 0.00 0.00 3.07
155 156 3.976701 GAGGTGGTGGGCGTCATGG 62.977 68.421 0.00 0.00 0.00 3.66
160 161 4.460683 GTGGGCGTCATGGCGGTA 62.461 66.667 22.88 0.00 46.04 4.02
161 162 4.460683 TGGGCGTCATGGCGGTAC 62.461 66.667 22.88 4.38 46.04 3.34
162 163 4.460683 GGGCGTCATGGCGGTACA 62.461 66.667 22.88 0.00 46.04 2.90
163 164 2.890474 GGCGTCATGGCGGTACAG 60.890 66.667 22.88 0.00 0.00 2.74
164 165 2.890474 GCGTCATGGCGGTACAGG 60.890 66.667 22.88 0.00 0.00 4.00
165 166 2.202878 CGTCATGGCGGTACAGGG 60.203 66.667 12.98 0.00 0.00 4.45
166 167 2.717044 CGTCATGGCGGTACAGGGA 61.717 63.158 12.98 0.00 0.00 4.20
167 168 1.600107 GTCATGGCGGTACAGGGAA 59.400 57.895 0.00 0.00 0.00 3.97
168 169 0.180406 GTCATGGCGGTACAGGGAAT 59.820 55.000 0.00 0.00 0.00 3.01
169 170 0.468226 TCATGGCGGTACAGGGAATC 59.532 55.000 0.00 0.00 0.00 2.52
170 171 0.880278 CATGGCGGTACAGGGAATCG 60.880 60.000 0.00 0.00 0.00 3.34
171 172 1.046472 ATGGCGGTACAGGGAATCGA 61.046 55.000 0.00 0.00 0.00 3.59
172 173 1.067582 GGCGGTACAGGGAATCGAG 59.932 63.158 0.00 0.00 0.00 4.04
173 174 1.067582 GCGGTACAGGGAATCGAGG 59.932 63.158 0.00 0.00 0.00 4.63
174 175 1.067582 CGGTACAGGGAATCGAGGC 59.932 63.158 0.00 0.00 0.00 4.70
175 176 1.446366 GGTACAGGGAATCGAGGCC 59.554 63.158 0.00 0.00 0.00 5.19
176 177 1.335132 GGTACAGGGAATCGAGGCCA 61.335 60.000 5.01 0.00 0.00 5.36
177 178 0.179081 GTACAGGGAATCGAGGCCAC 60.179 60.000 5.01 0.00 0.00 5.01
178 179 0.616395 TACAGGGAATCGAGGCCACA 60.616 55.000 5.01 0.00 0.00 4.17
179 180 1.299648 CAGGGAATCGAGGCCACAA 59.700 57.895 5.01 0.00 0.00 3.33
180 181 0.322456 CAGGGAATCGAGGCCACAAA 60.322 55.000 5.01 0.00 0.00 2.83
181 182 0.035056 AGGGAATCGAGGCCACAAAG 60.035 55.000 5.01 0.00 0.00 2.77
182 183 1.032114 GGGAATCGAGGCCACAAAGG 61.032 60.000 5.01 0.00 41.84 3.11
183 184 0.322546 GGAATCGAGGCCACAAAGGT 60.323 55.000 5.01 0.00 40.61 3.50
184 185 1.534729 GAATCGAGGCCACAAAGGTT 58.465 50.000 5.01 0.00 40.61 3.50
185 186 1.200020 GAATCGAGGCCACAAAGGTTG 59.800 52.381 5.01 0.00 40.61 3.77
186 187 0.400213 ATCGAGGCCACAAAGGTTGA 59.600 50.000 5.01 0.00 40.61 3.18
187 188 0.181587 TCGAGGCCACAAAGGTTGAA 59.818 50.000 5.01 0.00 40.61 2.69
188 189 0.310854 CGAGGCCACAAAGGTTGAAC 59.689 55.000 5.01 0.00 40.61 3.18
189 190 0.673985 GAGGCCACAAAGGTTGAACC 59.326 55.000 6.16 6.16 40.61 3.62
190 191 0.032615 AGGCCACAAAGGTTGAACCA 60.033 50.000 17.83 0.00 41.95 3.67
191 192 1.047801 GGCCACAAAGGTTGAACCAT 58.952 50.000 17.83 0.55 41.95 3.55
192 193 1.270252 GGCCACAAAGGTTGAACCATG 60.270 52.381 17.83 16.62 41.95 3.66
193 194 1.412343 GCCACAAAGGTTGAACCATGT 59.588 47.619 17.83 17.26 41.95 3.21
195 196 2.472816 CACAAAGGTTGAACCATGTGC 58.527 47.619 28.20 0.51 45.01 4.57
196 197 1.066908 ACAAAGGTTGAACCATGTGCG 59.933 47.619 20.38 5.20 41.95 5.34
197 198 0.031994 AAAGGTTGAACCATGTGCGC 59.968 50.000 17.83 0.00 41.95 6.09
213 214 1.132834 TGCGCTTGTGGATAAATGCAG 59.867 47.619 9.73 0.00 0.00 4.41
221 222 2.481952 GTGGATAAATGCAGGATCTCGC 59.518 50.000 0.00 0.00 0.00 5.03
229 230 1.367471 CAGGATCTCGCCGGCATAA 59.633 57.895 28.98 11.01 0.00 1.90
233 234 1.005630 ATCTCGCCGGCATAAGCTC 60.006 57.895 28.98 0.00 41.70 4.09
234 235 2.441822 ATCTCGCCGGCATAAGCTCC 62.442 60.000 28.98 0.00 41.70 4.70
241 242 1.141019 GGCATAAGCTCCGTGACGA 59.859 57.895 6.54 0.00 41.70 4.20
262 263 0.319211 GACCACATGTTCGTCGGTCA 60.319 55.000 21.47 0.00 44.55 4.02
285 286 3.502123 AGAGATAAGGAGAGGTCGAGG 57.498 52.381 0.00 0.00 0.00 4.63
304 305 1.190643 GAGGAGGTCTTGTCTGGGAG 58.809 60.000 0.00 0.00 0.00 4.30
310 311 0.545548 GTCTTGTCTGGGAGGGGAGT 60.546 60.000 0.00 0.00 0.00 3.85
350 351 2.082354 GCAAGAGCGTAAGTGAGGC 58.918 57.895 0.00 0.00 39.33 4.70
370 371 1.663702 GCGACGATGGGGATAACCG 60.664 63.158 0.00 0.00 41.60 4.44
375 376 0.973632 CGATGGGGATAACCGGATGA 59.026 55.000 9.46 0.00 41.60 2.92
383 384 1.399744 ATAACCGGATGAGCAGCGGA 61.400 55.000 9.46 0.00 0.00 5.54
386 387 4.899239 CGGATGAGCAGCGGACCC 62.899 72.222 0.00 0.00 0.00 4.46
387 388 4.899239 GGATGAGCAGCGGACCCG 62.899 72.222 3.73 3.73 43.09 5.28
388 389 4.899239 GATGAGCAGCGGACCCGG 62.899 72.222 10.70 0.00 40.19 5.73
440 441 0.542333 AGATCGTGGGAGAGAGACGA 59.458 55.000 0.00 0.00 45.42 4.20
456 457 2.037527 GAGAGGTCGGTGAGGGGT 59.962 66.667 0.00 0.00 0.00 4.95
472 473 1.749258 GGTAGGGGCGGCTTTCTTG 60.749 63.158 9.56 0.00 0.00 3.02
511 512 3.380004 TGCGATTGTTCTTGTGGAAAAGT 59.620 39.130 0.00 0.00 35.51 2.66
520 521 7.703328 TGTTCTTGTGGAAAAGTAAGACATTC 58.297 34.615 0.00 0.00 35.51 2.67
522 523 7.873719 TCTTGTGGAAAAGTAAGACATTCAA 57.126 32.000 0.00 0.00 0.00 2.69
527 528 5.894393 TGGAAAAGTAAGACATTCAACCCAA 59.106 36.000 0.00 0.00 0.00 4.12
528 529 6.040391 TGGAAAAGTAAGACATTCAACCCAAG 59.960 38.462 0.00 0.00 0.00 3.61
530 531 7.201875 GGAAAAGTAAGACATTCAACCCAAGAA 60.202 37.037 0.00 0.00 0.00 2.52
543 623 1.826385 CCAAGAAGGGCTTCGAATGT 58.174 50.000 0.00 0.00 43.97 2.71
548 628 0.598065 AAGGGCTTCGAATGTGTTGC 59.402 50.000 0.00 0.00 0.00 4.17
551 631 1.666888 GGGCTTCGAATGTGTTGCAAG 60.667 52.381 0.00 0.00 0.00 4.01
556 636 3.111853 TCGAATGTGTTGCAAGAGAGT 57.888 42.857 0.00 0.00 0.00 3.24
560 640 3.996150 ATGTGTTGCAAGAGAGTTTGG 57.004 42.857 0.00 0.00 0.00 3.28
601 688 2.719046 CGAAAATTCAACGGCTGTGAAC 59.281 45.455 0.00 0.00 0.00 3.18
602 689 3.701241 GAAAATTCAACGGCTGTGAACA 58.299 40.909 0.00 0.00 0.00 3.18
604 691 3.559238 AATTCAACGGCTGTGAACATC 57.441 42.857 0.00 0.00 0.00 3.06
605 692 2.254546 TTCAACGGCTGTGAACATCT 57.745 45.000 0.00 0.00 0.00 2.90
606 693 1.795768 TCAACGGCTGTGAACATCTC 58.204 50.000 0.00 0.00 0.00 2.75
607 694 1.069978 TCAACGGCTGTGAACATCTCA 59.930 47.619 0.00 0.00 0.00 3.27
609 696 0.036952 ACGGCTGTGAACATCTCAGG 60.037 55.000 0.00 0.00 38.16 3.86
610 697 0.247460 CGGCTGTGAACATCTCAGGA 59.753 55.000 10.40 0.00 38.16 3.86
611 698 1.134580 CGGCTGTGAACATCTCAGGAT 60.135 52.381 10.40 0.00 38.16 3.24
612 699 2.559440 GGCTGTGAACATCTCAGGATC 58.441 52.381 10.40 0.00 38.16 3.36
613 700 2.093288 GGCTGTGAACATCTCAGGATCA 60.093 50.000 10.40 0.00 38.16 2.92
614 701 3.433314 GGCTGTGAACATCTCAGGATCAT 60.433 47.826 10.40 0.00 38.16 2.45
617 704 4.763073 TGTGAACATCTCAGGATCATGAC 58.237 43.478 5.84 0.00 33.60 3.06
618 705 4.223477 TGTGAACATCTCAGGATCATGACA 59.777 41.667 5.84 0.00 33.60 3.58
622 709 6.373495 TGAACATCTCAGGATCATGACAAAAG 59.627 38.462 5.84 0.00 0.00 2.27
623 710 6.058553 ACATCTCAGGATCATGACAAAAGA 57.941 37.500 5.84 2.28 0.00 2.52
624 711 6.114089 ACATCTCAGGATCATGACAAAAGAG 58.886 40.000 5.84 2.68 0.00 2.85
628 715 3.128242 CAGGATCATGACAAAAGAGTGCC 59.872 47.826 0.00 0.00 0.00 5.01
804 922 3.403558 GCCCCCTCCCTCACTCAC 61.404 72.222 0.00 0.00 0.00 3.51
805 923 2.689034 CCCCCTCCCTCACTCACC 60.689 72.222 0.00 0.00 0.00 4.02
808 926 2.452114 CCTCCCTCACTCACCCCT 59.548 66.667 0.00 0.00 0.00 4.79
1231 1366 4.081031 CCTTCTTAAACCCTAGACCCAGAC 60.081 50.000 0.00 0.00 0.00 3.51
1283 1418 1.641577 GTACTCGGCATTCCAGTCAC 58.358 55.000 0.00 0.00 0.00 3.67
1284 1419 0.535335 TACTCGGCATTCCAGTCACC 59.465 55.000 0.00 0.00 0.00 4.02
1298 1433 2.029380 CAGTCACCGTGTCATGTTCCTA 60.029 50.000 0.00 0.00 0.00 2.94
1416 1575 6.017026 GGCCCTGATAAAGTTATCTGCTTAAC 60.017 42.308 11.36 0.00 40.11 2.01
1439 1598 6.106673 ACTGTTGATACCAGTACAGTAATGC 58.893 40.000 2.28 0.00 46.72 3.56
1509 1668 3.665190 GGCTTGCTCTAACTGTTAGTGT 58.335 45.455 22.95 0.00 34.81 3.55
1529 1688 7.100458 AGTGTAAAGCAAGATTTCACACTTT 57.900 32.000 14.39 0.00 41.61 2.66
1530 1689 6.974622 AGTGTAAAGCAAGATTTCACACTTTG 59.025 34.615 14.39 0.00 41.61 2.77
1531 1690 5.748152 TGTAAAGCAAGATTTCACACTTTGC 59.252 36.000 0.00 0.00 32.55 3.68
1534 1693 4.614946 AGCAAGATTTCACACTTTGCTTC 58.385 39.130 4.35 0.00 31.81 3.86
1555 1714 7.666804 TGCTTCCACGGAGTATATAACTATGTA 59.333 37.037 0.00 0.00 41.61 2.29
1648 1808 4.794169 CATGGTGCCTTTACTTGTGTTAC 58.206 43.478 0.00 0.00 0.00 2.50
2040 2200 2.280628 CCTCCGACCAAGCTTAATCAC 58.719 52.381 0.00 0.00 0.00 3.06
2123 2284 5.731591 CCTTTACTAGTCCGATCCTTGTTT 58.268 41.667 0.00 0.00 0.00 2.83
2168 2332 1.204941 CCTGTACCTGGTCTGTGCTAC 59.795 57.143 0.63 0.00 0.00 3.58
2465 2646 8.870879 GGTAAGAGTGTGAATATGTTGTCTTAC 58.129 37.037 9.43 9.43 42.00 2.34
2484 2665 6.684555 GTCTTACGATTTGCTCATCACATTTC 59.315 38.462 0.00 0.00 0.00 2.17
2550 2733 1.352687 GATCCTAAAGGGGAGATGGGC 59.647 57.143 0.00 0.00 38.92 5.36
2679 2862 7.345691 TCCTTCAAGATGGCAATAGTTAATCA 58.654 34.615 0.00 0.00 0.00 2.57
2683 2866 4.729868 AGATGGCAATAGTTAATCACCCC 58.270 43.478 0.00 0.00 0.00 4.95
2695 2878 5.072329 AGTTAATCACCCCTGTATCTCCATG 59.928 44.000 0.00 0.00 0.00 3.66
2704 2887 6.564152 ACCCCTGTATCTCCATGATCTTATTT 59.436 38.462 0.00 0.00 36.65 1.40
2790 2973 1.202452 AGAACTGCAAGCAAAACAGCC 60.202 47.619 0.00 0.00 37.60 4.85
2814 2997 3.549794 AGAGCAGCATGAAAAGGTATCC 58.450 45.455 0.00 0.00 39.69 2.59
3049 3233 6.772360 ATGCAAACATTTTGTTCCCTTTTT 57.228 29.167 0.00 0.00 40.14 1.94
3079 3263 5.733620 ATTGTCCATCTGTTTTCAGCAAT 57.266 34.783 0.00 0.00 46.59 3.56
3085 3269 9.625747 TGTCCATCTGTTTTCAGCAATTATATA 57.374 29.630 0.00 0.00 46.59 0.86
3354 3538 5.701290 TGCTGATGCTGATGAGATAATTCAG 59.299 40.000 0.00 0.00 39.87 3.02
3455 3639 7.932134 TCTATATCATAAGGGTGCATGGATTT 58.068 34.615 0.00 0.00 0.00 2.17
3481 3666 7.454380 TCATAATCTGTGAAAAATTCCTGGGTT 59.546 33.333 0.00 0.00 0.00 4.11
3553 3741 5.156355 CAAATAAGCTGTGAAATGCGTTCT 58.844 37.500 0.00 0.00 37.13 3.01
3931 4122 5.479306 TCTTCCAATTCTAGTCAAAGGTCG 58.521 41.667 0.00 0.00 0.00 4.79
3935 4126 4.081309 CCAATTCTAGTCAAAGGTCGGGTA 60.081 45.833 0.00 0.00 0.00 3.69
4097 4288 9.904198 TCATCTTAAGTAATGTCATTCCATTCA 57.096 29.630 0.07 0.00 36.48 2.57
4240 4431 6.380079 AGTCAAAAGGTATCATGAGGTTCT 57.620 37.500 0.09 0.00 0.00 3.01
4320 4511 9.698617 GTACTTCAATGTCGTATAACATTTTCC 57.301 33.333 0.85 0.00 45.29 3.13
4321 4517 7.461107 ACTTCAATGTCGTATAACATTTTCCG 58.539 34.615 0.85 0.00 45.29 4.30
4372 4568 1.813513 ATCTGGAAACTGAACTGCGG 58.186 50.000 0.00 0.00 41.93 5.69
4538 4734 3.329386 TCTGTTGTGCTATTGACTCTGC 58.671 45.455 0.00 0.00 0.00 4.26
4539 4735 3.007290 TCTGTTGTGCTATTGACTCTGCT 59.993 43.478 0.00 0.00 0.00 4.24
4552 4749 2.887152 GACTCTGCTTGTTCATGGGTTT 59.113 45.455 0.00 0.00 0.00 3.27
4603 4800 9.331282 AGCAGAAGTTTATTCTATTCCATGTAC 57.669 33.333 0.00 0.00 0.00 2.90
4604 4801 8.560374 GCAGAAGTTTATTCTATTCCATGTACC 58.440 37.037 0.00 0.00 0.00 3.34
4826 5023 9.793252 CTAATTTGGGCATCATATATAAGCAAC 57.207 33.333 5.82 0.46 0.00 4.17
4987 5184 3.807071 GCTTAAGGCTATGCAGAGAACTC 59.193 47.826 13.69 0.00 38.06 3.01
5064 5261 3.820557 ACCAGTAGCAAATGTGAACACT 58.179 40.909 6.51 0.00 0.00 3.55
5084 5281 0.304705 GATGATGCCCGTGTAAAGCG 59.695 55.000 0.00 0.00 0.00 4.68
5112 5309 3.924686 ACTACGCAAAAGATACGTTGGAG 59.075 43.478 0.00 0.00 40.99 3.86
5175 5372 1.017387 GTTCCACCGATGAAGATGCC 58.983 55.000 0.00 0.00 0.00 4.40
5559 5756 0.396811 CTGAAGGGAAACGTGAGGGT 59.603 55.000 0.00 0.00 0.00 4.34
6063 6260 3.426903 CCCTTCGAGTCGGGGTATA 57.573 57.895 16.40 0.00 36.78 1.47
6074 6271 5.400485 CGAGTCGGGGTATAAACTTTTATCG 59.600 44.000 4.10 0.00 35.20 2.92
6112 6309 7.715249 TGTGCTTCTAACTTCTTTGTATCACTT 59.285 33.333 0.00 0.00 0.00 3.16
6162 6372 1.355971 TGCCATCGCTTTCGTTCTAC 58.644 50.000 0.00 0.00 36.96 2.59
6175 6385 6.090493 GCTTTCGTTCTACGTCTTCCTAAAAT 59.910 38.462 0.00 0.00 43.14 1.82
6180 6390 6.183360 CGTTCTACGTCTTCCTAAAATGGAAC 60.183 42.308 0.00 0.00 37.72 3.62
6229 6439 9.592196 CAGTTAAGTAGTTATATGTACCCCCTA 57.408 37.037 0.00 0.00 0.00 3.53
6476 6687 6.549433 TGTGGAGTAAATATAAACGGAGGT 57.451 37.500 0.00 0.00 0.00 3.85
6562 6774 8.726988 ACAACAAATATAAGTGAAATAGCGTGT 58.273 29.630 0.00 0.00 0.00 4.49
6583 6795 6.086765 CGTGTGATTTCAAATTACAGTCTTGC 59.913 38.462 7.94 0.00 0.00 4.01
6600 6812 4.560819 GTCTTGCTAAATCTCAGTCGACTG 59.439 45.833 34.76 34.76 45.08 3.51
6614 6826 4.175787 GTCGACTGAGACTTGGTTATGT 57.824 45.455 8.70 0.00 38.09 2.29
6615 6827 4.167268 GTCGACTGAGACTTGGTTATGTC 58.833 47.826 8.70 0.00 38.09 3.06
6616 6828 4.079970 TCGACTGAGACTTGGTTATGTCT 58.920 43.478 0.00 0.00 42.18 3.41
6625 6837 5.184864 AGACTTGGTTATGTCTCAGTCTCAG 59.815 44.000 0.00 0.00 36.84 3.35
6632 6844 2.784347 TGTCTCAGTCTCAGTCGATGT 58.216 47.619 0.00 0.00 0.00 3.06
6669 6881 6.985188 TCTTACATTAGGATCTGTGCAAAC 57.015 37.500 0.00 0.00 0.00 2.93
6675 6887 6.435277 ACATTAGGATCTGTGCAAACATTTCT 59.565 34.615 0.00 0.00 0.00 2.52
6735 6947 0.613777 ACTTGGTTAAGGCGAGGGAG 59.386 55.000 0.00 0.00 38.26 4.30
6736 6948 0.902531 CTTGGTTAAGGCGAGGGAGA 59.097 55.000 0.00 0.00 0.00 3.71
6737 6949 0.611714 TTGGTTAAGGCGAGGGAGAC 59.388 55.000 0.00 0.00 0.00 3.36
6738 6950 0.252103 TGGTTAAGGCGAGGGAGACT 60.252 55.000 0.00 0.00 0.00 3.24
6739 6951 0.175989 GGTTAAGGCGAGGGAGACTG 59.824 60.000 0.00 0.00 0.00 3.51
6740 6952 0.460459 GTTAAGGCGAGGGAGACTGC 60.460 60.000 0.00 0.00 0.00 4.40
6741 6953 0.614979 TTAAGGCGAGGGAGACTGCT 60.615 55.000 0.00 0.00 0.00 4.24
6742 6954 1.323271 TAAGGCGAGGGAGACTGCTG 61.323 60.000 0.00 0.00 0.00 4.41
6743 6955 4.154347 GGCGAGGGAGACTGCTGG 62.154 72.222 0.00 0.00 0.00 4.85
6744 6956 4.828925 GCGAGGGAGACTGCTGGC 62.829 72.222 0.00 0.00 0.00 4.85
6765 6977 2.486982 CTCCCTGAACAAGCTGAATGTG 59.513 50.000 0.00 0.00 0.00 3.21
6766 6978 2.158623 TCCCTGAACAAGCTGAATGTGT 60.159 45.455 0.00 0.00 0.00 3.72
6767 6979 2.030540 CCCTGAACAAGCTGAATGTGTG 60.031 50.000 0.00 0.00 0.00 3.82
6768 6980 2.880268 CCTGAACAAGCTGAATGTGTGA 59.120 45.455 0.00 0.00 0.00 3.58
6769 6981 3.504906 CCTGAACAAGCTGAATGTGTGAT 59.495 43.478 0.00 0.00 0.00 3.06
6770 6982 4.022589 CCTGAACAAGCTGAATGTGTGATT 60.023 41.667 0.00 0.00 0.00 2.57
6771 6983 4.862350 TGAACAAGCTGAATGTGTGATTG 58.138 39.130 0.00 0.00 0.00 2.67
6772 6984 4.579753 TGAACAAGCTGAATGTGTGATTGA 59.420 37.500 0.00 0.00 0.00 2.57
6773 6985 5.242171 TGAACAAGCTGAATGTGTGATTGAT 59.758 36.000 0.00 0.00 0.00 2.57
6774 6986 6.430616 TGAACAAGCTGAATGTGTGATTGATA 59.569 34.615 0.00 0.00 0.00 2.15
6775 6987 6.432607 ACAAGCTGAATGTGTGATTGATAG 57.567 37.500 0.00 0.00 0.00 2.08
6776 6988 5.163683 ACAAGCTGAATGTGTGATTGATAGC 60.164 40.000 0.00 0.00 0.00 2.97
6777 6989 3.881688 AGCTGAATGTGTGATTGATAGCC 59.118 43.478 0.00 0.00 0.00 3.93
6778 6990 3.881688 GCTGAATGTGTGATTGATAGCCT 59.118 43.478 0.00 0.00 0.00 4.58
6779 6991 4.337555 GCTGAATGTGTGATTGATAGCCTT 59.662 41.667 0.00 0.00 0.00 4.35
6780 6992 5.163581 GCTGAATGTGTGATTGATAGCCTTT 60.164 40.000 0.00 0.00 0.00 3.11
6781 6993 6.626623 GCTGAATGTGTGATTGATAGCCTTTT 60.627 38.462 0.00 0.00 0.00 2.27
6782 6994 6.855836 TGAATGTGTGATTGATAGCCTTTTC 58.144 36.000 0.00 0.00 0.00 2.29
6783 6995 6.433716 TGAATGTGTGATTGATAGCCTTTTCA 59.566 34.615 0.00 0.00 0.00 2.69
6784 6996 5.885230 TGTGTGATTGATAGCCTTTTCAG 57.115 39.130 0.00 0.00 0.00 3.02
6785 6997 5.316167 TGTGTGATTGATAGCCTTTTCAGT 58.684 37.500 0.00 0.00 0.00 3.41
6786 6998 5.769662 TGTGTGATTGATAGCCTTTTCAGTT 59.230 36.000 0.00 0.00 0.00 3.16
6787 6999 6.265196 TGTGTGATTGATAGCCTTTTCAGTTT 59.735 34.615 0.00 0.00 0.00 2.66
6788 7000 6.583806 GTGTGATTGATAGCCTTTTCAGTTTG 59.416 38.462 0.00 0.00 0.00 2.93
6789 7001 6.265196 TGTGATTGATAGCCTTTTCAGTTTGT 59.735 34.615 0.00 0.00 0.00 2.83
6790 7002 6.583806 GTGATTGATAGCCTTTTCAGTTTGTG 59.416 38.462 0.00 0.00 0.00 3.33
6791 7003 6.489700 TGATTGATAGCCTTTTCAGTTTGTGA 59.510 34.615 0.00 0.00 0.00 3.58
6792 7004 5.947228 TGATAGCCTTTTCAGTTTGTGAG 57.053 39.130 0.00 0.00 36.21 3.51
6793 7005 5.620206 TGATAGCCTTTTCAGTTTGTGAGA 58.380 37.500 0.00 0.00 36.21 3.27
6794 7006 6.240894 TGATAGCCTTTTCAGTTTGTGAGAT 58.759 36.000 0.00 0.00 36.21 2.75
6795 7007 6.716628 TGATAGCCTTTTCAGTTTGTGAGATT 59.283 34.615 0.00 0.00 36.21 2.40
6796 7008 7.882791 TGATAGCCTTTTCAGTTTGTGAGATTA 59.117 33.333 0.00 0.00 36.21 1.75
6797 7009 6.319141 AGCCTTTTCAGTTTGTGAGATTAC 57.681 37.500 0.00 0.00 36.21 1.89
6798 7010 5.049405 AGCCTTTTCAGTTTGTGAGATTACG 60.049 40.000 0.00 0.00 36.21 3.18
6799 7011 5.147162 CCTTTTCAGTTTGTGAGATTACGC 58.853 41.667 0.00 0.00 36.21 4.42
6821 7033 6.823689 ACGCAAGACATATTTAGAACCATCTT 59.176 34.615 0.00 0.00 43.62 2.40
6834 7046 8.868522 TTAGAACCATCTTTGATTCACTCATT 57.131 30.769 0.00 0.00 37.10 2.57
6840 7052 4.335416 TCTTTGATTCACTCATTCACCCC 58.665 43.478 0.00 0.00 32.72 4.95
6918 7130 8.863872 AAATAAAATGGAATATACTCCCTCCG 57.136 34.615 0.00 0.00 34.22 4.63
6919 7131 5.906772 AAAATGGAATATACTCCCTCCGT 57.093 39.130 0.00 0.00 34.22 4.69
6920 7132 5.906772 AAATGGAATATACTCCCTCCGTT 57.093 39.130 0.00 0.00 38.55 4.44
6921 7133 5.485209 AATGGAATATACTCCCTCCGTTC 57.515 43.478 0.00 0.00 32.83 3.95
6922 7134 3.236896 TGGAATATACTCCCTCCGTTCC 58.763 50.000 0.00 0.00 34.22 3.62
6923 7135 3.116862 TGGAATATACTCCCTCCGTTCCT 60.117 47.826 0.00 0.00 35.75 3.36
6924 7136 4.106825 TGGAATATACTCCCTCCGTTCCTA 59.893 45.833 0.00 0.00 35.75 2.94
6925 7137 5.082425 GGAATATACTCCCTCCGTTCCTAA 58.918 45.833 0.00 0.00 32.83 2.69
6926 7138 5.541484 GGAATATACTCCCTCCGTTCCTAAA 59.459 44.000 0.00 0.00 32.83 1.85
6927 7139 6.212993 GGAATATACTCCCTCCGTTCCTAAAT 59.787 42.308 0.00 0.00 32.83 1.40
6928 7140 7.398332 GGAATATACTCCCTCCGTTCCTAAATA 59.602 40.741 0.00 0.00 32.83 1.40
6929 7141 7.715266 ATATACTCCCTCCGTTCCTAAATAC 57.285 40.000 0.00 0.00 0.00 1.89
6930 7142 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
6931 7143 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
6932 7144 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
6933 7145 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
6934 7146 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
6935 7147 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
6936 7148 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
6937 7149 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
6938 7150 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
6939 7151 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
6940 7152 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
6941 7153 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
6942 7154 7.010275 CCGTTCCTAAATACTTGTCTTTCTAGC 59.990 40.741 0.00 0.00 0.00 3.42
6943 7155 7.010275 CGTTCCTAAATACTTGTCTTTCTAGCC 59.990 40.741 0.00 0.00 0.00 3.93
6944 7156 7.490657 TCCTAAATACTTGTCTTTCTAGCCA 57.509 36.000 0.00 0.00 0.00 4.75
6945 7157 8.090788 TCCTAAATACTTGTCTTTCTAGCCAT 57.909 34.615 0.00 0.00 0.00 4.40
6946 7158 8.548877 TCCTAAATACTTGTCTTTCTAGCCATT 58.451 33.333 0.00 0.00 0.00 3.16
6947 7159 9.178758 CCTAAATACTTGTCTTTCTAGCCATTT 57.821 33.333 0.00 0.00 0.00 2.32
6949 7161 8.635765 AAATACTTGTCTTTCTAGCCATTTCA 57.364 30.769 0.00 0.00 0.00 2.69
6950 7162 8.635765 AATACTTGTCTTTCTAGCCATTTCAA 57.364 30.769 0.00 0.00 0.00 2.69
6951 7163 6.959639 ACTTGTCTTTCTAGCCATTTCAAA 57.040 33.333 0.00 0.00 0.00 2.69
6952 7164 7.530426 ACTTGTCTTTCTAGCCATTTCAAAT 57.470 32.000 0.00 0.00 0.00 2.32
6953 7165 7.373493 ACTTGTCTTTCTAGCCATTTCAAATG 58.627 34.615 2.80 2.80 0.00 2.32
6954 7166 7.231317 ACTTGTCTTTCTAGCCATTTCAAATGA 59.769 33.333 11.98 0.00 0.00 2.57
6955 7167 7.523293 TGTCTTTCTAGCCATTTCAAATGAA 57.477 32.000 11.98 0.00 0.00 2.57
6956 7168 8.125978 TGTCTTTCTAGCCATTTCAAATGAAT 57.874 30.769 11.98 2.27 33.54 2.57
6957 7169 9.241919 TGTCTTTCTAGCCATTTCAAATGAATA 57.758 29.630 11.98 3.31 33.54 1.75
6966 7178 9.897744 AGCCATTTCAAATGAATATTACATACG 57.102 29.630 11.98 0.00 33.54 3.06
6967 7179 9.128107 GCCATTTCAAATGAATATTACATACGG 57.872 33.333 11.98 0.00 33.54 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.316987 AGACTTAAGGTCAGGTTGGATTTG 58.683 41.667 7.53 0.00 46.72 2.32
1 2 5.073144 TGAGACTTAAGGTCAGGTTGGATTT 59.927 40.000 7.53 0.00 46.72 2.17
2 3 4.597507 TGAGACTTAAGGTCAGGTTGGATT 59.402 41.667 7.53 0.00 46.72 3.01
3 4 4.168101 TGAGACTTAAGGTCAGGTTGGAT 58.832 43.478 7.53 0.00 46.72 3.41
4 5 3.583228 TGAGACTTAAGGTCAGGTTGGA 58.417 45.455 7.53 0.00 46.72 3.53
6 7 5.412904 GGATTTGAGACTTAAGGTCAGGTTG 59.587 44.000 7.53 0.00 46.72 3.77
7 8 5.073144 TGGATTTGAGACTTAAGGTCAGGTT 59.927 40.000 7.53 0.00 46.72 3.50
8 9 4.597507 TGGATTTGAGACTTAAGGTCAGGT 59.402 41.667 7.53 2.46 46.72 4.00
9 10 5.165961 TGGATTTGAGACTTAAGGTCAGG 57.834 43.478 7.53 0.00 46.72 3.86
10 11 8.792830 TTATTGGATTTGAGACTTAAGGTCAG 57.207 34.615 7.53 0.00 46.72 3.51
18 19 9.193806 ACTGCATTATTATTGGATTTGAGACTT 57.806 29.630 0.00 0.00 0.00 3.01
19 20 8.627403 CACTGCATTATTATTGGATTTGAGACT 58.373 33.333 0.00 0.00 0.00 3.24
20 21 8.623903 TCACTGCATTATTATTGGATTTGAGAC 58.376 33.333 0.00 0.00 0.00 3.36
21 22 8.750515 TCACTGCATTATTATTGGATTTGAGA 57.249 30.769 0.00 0.00 0.00 3.27
22 23 9.406828 CATCACTGCATTATTATTGGATTTGAG 57.593 33.333 0.00 0.00 0.00 3.02
23 24 8.361889 CCATCACTGCATTATTATTGGATTTGA 58.638 33.333 0.00 0.00 0.00 2.69
24 25 8.361889 TCCATCACTGCATTATTATTGGATTTG 58.638 33.333 0.00 0.00 0.00 2.32
25 26 8.481492 TCCATCACTGCATTATTATTGGATTT 57.519 30.769 0.00 0.00 0.00 2.17
26 27 7.946219 TCTCCATCACTGCATTATTATTGGATT 59.054 33.333 0.00 0.00 30.87 3.01
27 28 7.464273 TCTCCATCACTGCATTATTATTGGAT 58.536 34.615 0.00 0.00 30.87 3.41
28 29 6.840527 TCTCCATCACTGCATTATTATTGGA 58.159 36.000 0.00 0.00 0.00 3.53
29 30 6.150641 CCTCTCCATCACTGCATTATTATTGG 59.849 42.308 0.00 0.00 0.00 3.16
30 31 6.938596 TCCTCTCCATCACTGCATTATTATTG 59.061 38.462 0.00 0.00 0.00 1.90
31 32 7.083062 TCCTCTCCATCACTGCATTATTATT 57.917 36.000 0.00 0.00 0.00 1.40
32 33 6.271857 ACTCCTCTCCATCACTGCATTATTAT 59.728 38.462 0.00 0.00 0.00 1.28
33 34 5.604231 ACTCCTCTCCATCACTGCATTATTA 59.396 40.000 0.00 0.00 0.00 0.98
34 35 4.411540 ACTCCTCTCCATCACTGCATTATT 59.588 41.667 0.00 0.00 0.00 1.40
35 36 3.972638 ACTCCTCTCCATCACTGCATTAT 59.027 43.478 0.00 0.00 0.00 1.28
36 37 3.378512 ACTCCTCTCCATCACTGCATTA 58.621 45.455 0.00 0.00 0.00 1.90
37 38 2.170187 GACTCCTCTCCATCACTGCATT 59.830 50.000 0.00 0.00 0.00 3.56
38 39 1.761784 GACTCCTCTCCATCACTGCAT 59.238 52.381 0.00 0.00 0.00 3.96
39 40 1.189752 GACTCCTCTCCATCACTGCA 58.810 55.000 0.00 0.00 0.00 4.41
40 41 1.189752 TGACTCCTCTCCATCACTGC 58.810 55.000 0.00 0.00 0.00 4.40
41 42 2.168106 CCTTGACTCCTCTCCATCACTG 59.832 54.545 0.00 0.00 0.00 3.66
42 43 2.225496 ACCTTGACTCCTCTCCATCACT 60.225 50.000 0.00 0.00 0.00 3.41
43 44 2.093764 CACCTTGACTCCTCTCCATCAC 60.094 54.545 0.00 0.00 0.00 3.06
44 45 2.182827 CACCTTGACTCCTCTCCATCA 58.817 52.381 0.00 0.00 0.00 3.07
45 46 2.167487 GTCACCTTGACTCCTCTCCATC 59.833 54.545 0.00 0.00 43.73 3.51
46 47 2.183679 GTCACCTTGACTCCTCTCCAT 58.816 52.381 0.00 0.00 43.73 3.41
47 48 1.633774 GTCACCTTGACTCCTCTCCA 58.366 55.000 0.00 0.00 43.73 3.86
57 58 3.476552 GTGGTTTGATCTGTCACCTTGA 58.523 45.455 0.00 0.00 33.11 3.02
58 59 2.554032 GGTGGTTTGATCTGTCACCTTG 59.446 50.000 15.66 0.00 43.14 3.61
59 60 2.489073 GGGTGGTTTGATCTGTCACCTT 60.489 50.000 19.49 0.00 45.11 3.50
60 61 1.073923 GGGTGGTTTGATCTGTCACCT 59.926 52.381 19.49 0.00 45.11 4.00
61 62 1.202879 TGGGTGGTTTGATCTGTCACC 60.203 52.381 15.02 15.02 45.05 4.02
62 63 2.270352 TGGGTGGTTTGATCTGTCAC 57.730 50.000 0.00 0.00 33.11 3.67
63 64 2.488891 CCTTGGGTGGTTTGATCTGTCA 60.489 50.000 0.00 0.00 0.00 3.58
64 65 2.162681 CCTTGGGTGGTTTGATCTGTC 58.837 52.381 0.00 0.00 0.00 3.51
65 66 1.203050 CCCTTGGGTGGTTTGATCTGT 60.203 52.381 0.00 0.00 0.00 3.41
66 67 1.549203 CCCTTGGGTGGTTTGATCTG 58.451 55.000 0.00 0.00 0.00 2.90
67 68 0.409484 CCCCTTGGGTGGTTTGATCT 59.591 55.000 4.84 0.00 38.25 2.75
68 69 1.257750 GCCCCTTGGGTGGTTTGATC 61.258 60.000 4.84 0.00 46.51 2.92
69 70 1.229177 GCCCCTTGGGTGGTTTGAT 60.229 57.895 4.84 0.00 46.51 2.57
70 71 2.200092 GCCCCTTGGGTGGTTTGA 59.800 61.111 4.84 0.00 46.51 2.69
71 72 2.922503 GGCCCCTTGGGTGGTTTG 60.923 66.667 4.84 0.00 46.51 2.93
72 73 2.673027 GAAGGCCCCTTGGGTGGTTT 62.673 60.000 3.91 0.00 46.51 3.27
73 74 3.116950 AAGGCCCCTTGGGTGGTT 61.117 61.111 0.00 0.00 46.51 3.67
74 75 3.590574 GAAGGCCCCTTGGGTGGT 61.591 66.667 3.91 0.00 46.51 4.16
75 76 3.159104 TTGAAGGCCCCTTGGGTGG 62.159 63.158 3.91 0.00 46.51 4.61
76 77 1.607467 CTTGAAGGCCCCTTGGGTG 60.607 63.158 3.91 0.00 46.51 4.61
77 78 2.854076 CTTGAAGGCCCCTTGGGT 59.146 61.111 3.91 0.00 46.51 4.51
79 80 2.037847 CCCTTGAAGGCCCCTTGG 59.962 66.667 5.50 0.00 36.26 3.61
80 81 1.506028 TACCCCTTGAAGGCCCCTTG 61.506 60.000 5.50 0.00 36.26 3.61
81 82 1.151452 TACCCCTTGAAGGCCCCTT 60.151 57.895 5.50 0.00 39.23 3.95
82 83 1.929088 GTACCCCTTGAAGGCCCCT 60.929 63.158 5.50 0.00 32.73 4.79
83 84 2.681591 GTACCCCTTGAAGGCCCC 59.318 66.667 5.50 0.00 32.73 5.80
84 85 2.235761 TGGTACCCCTTGAAGGCCC 61.236 63.158 10.07 3.28 32.73 5.80
85 86 1.001269 GTGGTACCCCTTGAAGGCC 60.001 63.158 10.07 1.94 32.73 5.19
86 87 1.001269 GGTGGTACCCCTTGAAGGC 60.001 63.158 10.07 0.00 32.73 4.35
87 88 0.999712 ATGGTGGTACCCCTTGAAGG 59.000 55.000 10.07 3.69 37.50 3.46
88 89 1.916181 AGATGGTGGTACCCCTTGAAG 59.084 52.381 10.07 0.00 37.50 3.02
89 90 1.633432 CAGATGGTGGTACCCCTTGAA 59.367 52.381 10.07 0.00 37.50 2.69
90 91 1.285280 CAGATGGTGGTACCCCTTGA 58.715 55.000 10.07 0.00 37.50 3.02
91 92 0.394352 GCAGATGGTGGTACCCCTTG 60.394 60.000 10.07 10.89 37.50 3.61
92 93 1.571773 GGCAGATGGTGGTACCCCTT 61.572 60.000 10.07 8.39 37.50 3.95
93 94 2.001269 GGCAGATGGTGGTACCCCT 61.001 63.158 10.07 0.75 37.50 4.79
94 95 1.645402 ATGGCAGATGGTGGTACCCC 61.645 60.000 10.07 10.88 37.50 4.95
95 96 0.179018 GATGGCAGATGGTGGTACCC 60.179 60.000 10.07 0.11 37.50 3.69
96 97 0.839946 AGATGGCAGATGGTGGTACC 59.160 55.000 4.43 4.43 39.22 3.34
97 98 2.292267 CAAGATGGCAGATGGTGGTAC 58.708 52.381 0.00 0.00 0.00 3.34
98 99 1.915489 ACAAGATGGCAGATGGTGGTA 59.085 47.619 0.00 0.00 0.00 3.25
99 100 0.700564 ACAAGATGGCAGATGGTGGT 59.299 50.000 0.00 0.00 0.00 4.16
100 101 1.100510 CACAAGATGGCAGATGGTGG 58.899 55.000 0.00 0.00 0.00 4.61
101 102 1.471287 CACACAAGATGGCAGATGGTG 59.529 52.381 7.51 7.51 0.00 4.17
102 103 1.074405 ACACACAAGATGGCAGATGGT 59.926 47.619 0.00 0.00 0.00 3.55
103 104 1.471287 CACACACAAGATGGCAGATGG 59.529 52.381 0.00 0.00 0.00 3.51
104 105 1.471287 CCACACACAAGATGGCAGATG 59.529 52.381 0.00 0.00 0.00 2.90
105 106 1.352017 TCCACACACAAGATGGCAGAT 59.648 47.619 0.00 0.00 33.20 2.90
106 107 0.764271 TCCACACACAAGATGGCAGA 59.236 50.000 0.00 0.00 33.20 4.26
107 108 1.608055 TTCCACACACAAGATGGCAG 58.392 50.000 0.00 0.00 33.20 4.85
108 109 1.887854 CATTCCACACACAAGATGGCA 59.112 47.619 0.00 0.00 33.20 4.92
109 110 2.161855 TCATTCCACACACAAGATGGC 58.838 47.619 0.00 0.00 33.20 4.40
110 111 4.074259 TCTTCATTCCACACACAAGATGG 58.926 43.478 0.00 0.00 34.58 3.51
111 112 4.083110 GGTCTTCATTCCACACACAAGATG 60.083 45.833 0.00 0.00 0.00 2.90
112 113 4.074970 GGTCTTCATTCCACACACAAGAT 58.925 43.478 0.00 0.00 0.00 2.40
113 114 3.136443 AGGTCTTCATTCCACACACAAGA 59.864 43.478 0.00 0.00 0.00 3.02
114 115 3.480470 AGGTCTTCATTCCACACACAAG 58.520 45.455 0.00 0.00 0.00 3.16
115 116 3.476552 GAGGTCTTCATTCCACACACAA 58.523 45.455 0.00 0.00 0.00 3.33
116 117 2.547855 CGAGGTCTTCATTCCACACACA 60.548 50.000 0.00 0.00 0.00 3.72
117 118 2.069273 CGAGGTCTTCATTCCACACAC 58.931 52.381 0.00 0.00 0.00 3.82
118 119 1.967779 TCGAGGTCTTCATTCCACACA 59.032 47.619 0.00 0.00 0.00 3.72
119 120 2.611518 CTCGAGGTCTTCATTCCACAC 58.388 52.381 3.91 0.00 0.00 3.82
120 121 1.550524 CCTCGAGGTCTTCATTCCACA 59.449 52.381 24.04 0.00 0.00 4.17
121 122 2.301577 CCTCGAGGTCTTCATTCCAC 57.698 55.000 24.04 0.00 0.00 4.02
134 135 4.436998 GACGCCCACCACCTCGAG 62.437 72.222 5.13 5.13 0.00 4.04
136 137 4.082523 ATGACGCCCACCACCTCG 62.083 66.667 0.00 0.00 0.00 4.63
137 138 2.436646 CATGACGCCCACCACCTC 60.437 66.667 0.00 0.00 0.00 3.85
138 139 4.033776 CCATGACGCCCACCACCT 62.034 66.667 0.00 0.00 0.00 4.00
143 144 4.460683 TACCGCCATGACGCCCAC 62.461 66.667 0.00 0.00 0.00 4.61
144 145 4.460683 GTACCGCCATGACGCCCA 62.461 66.667 0.00 0.00 0.00 5.36
145 146 4.460683 TGTACCGCCATGACGCCC 62.461 66.667 0.00 0.00 0.00 6.13
146 147 2.890474 CTGTACCGCCATGACGCC 60.890 66.667 0.00 0.00 0.00 5.68
147 148 2.890474 CCTGTACCGCCATGACGC 60.890 66.667 0.00 0.00 0.00 5.19
148 149 2.202878 CCCTGTACCGCCATGACG 60.203 66.667 0.00 0.00 0.00 4.35
149 150 0.180406 ATTCCCTGTACCGCCATGAC 59.820 55.000 0.00 0.00 0.00 3.06
150 151 0.468226 GATTCCCTGTACCGCCATGA 59.532 55.000 0.00 0.00 0.00 3.07
151 152 0.880278 CGATTCCCTGTACCGCCATG 60.880 60.000 0.00 0.00 0.00 3.66
152 153 1.046472 TCGATTCCCTGTACCGCCAT 61.046 55.000 0.00 0.00 0.00 4.40
153 154 1.672854 CTCGATTCCCTGTACCGCCA 61.673 60.000 0.00 0.00 0.00 5.69
154 155 1.067582 CTCGATTCCCTGTACCGCC 59.932 63.158 0.00 0.00 0.00 6.13
155 156 1.067582 CCTCGATTCCCTGTACCGC 59.932 63.158 0.00 0.00 0.00 5.68
156 157 1.067582 GCCTCGATTCCCTGTACCG 59.932 63.158 0.00 0.00 0.00 4.02
157 158 1.335132 TGGCCTCGATTCCCTGTACC 61.335 60.000 3.32 0.00 0.00 3.34
158 159 0.179081 GTGGCCTCGATTCCCTGTAC 60.179 60.000 3.32 0.00 0.00 2.90
159 160 0.616395 TGTGGCCTCGATTCCCTGTA 60.616 55.000 3.32 0.00 0.00 2.74
160 161 1.488705 TTGTGGCCTCGATTCCCTGT 61.489 55.000 3.32 0.00 0.00 4.00
161 162 0.322456 TTTGTGGCCTCGATTCCCTG 60.322 55.000 3.32 0.00 0.00 4.45
162 163 0.035056 CTTTGTGGCCTCGATTCCCT 60.035 55.000 3.32 0.00 0.00 4.20
163 164 1.032114 CCTTTGTGGCCTCGATTCCC 61.032 60.000 3.32 0.00 0.00 3.97
164 165 0.322546 ACCTTTGTGGCCTCGATTCC 60.323 55.000 3.32 0.00 40.22 3.01
165 166 1.200020 CAACCTTTGTGGCCTCGATTC 59.800 52.381 3.32 0.00 40.22 2.52
166 167 1.202879 TCAACCTTTGTGGCCTCGATT 60.203 47.619 3.32 0.00 40.22 3.34
167 168 0.400213 TCAACCTTTGTGGCCTCGAT 59.600 50.000 3.32 0.00 40.22 3.59
168 169 0.181587 TTCAACCTTTGTGGCCTCGA 59.818 50.000 3.32 0.00 40.22 4.04
169 170 0.310854 GTTCAACCTTTGTGGCCTCG 59.689 55.000 3.32 0.00 40.22 4.63
170 171 0.673985 GGTTCAACCTTTGTGGCCTC 59.326 55.000 3.32 0.00 40.22 4.70
171 172 0.032615 TGGTTCAACCTTTGTGGCCT 60.033 50.000 8.40 0.00 39.58 5.19
172 173 1.047801 ATGGTTCAACCTTTGTGGCC 58.952 50.000 8.40 0.00 39.58 5.36
173 174 1.412343 ACATGGTTCAACCTTTGTGGC 59.588 47.619 8.40 0.00 39.58 5.01
174 175 2.802774 GCACATGGTTCAACCTTTGTGG 60.803 50.000 29.28 18.39 45.12 4.17
175 176 2.472816 GCACATGGTTCAACCTTTGTG 58.527 47.619 26.59 26.59 46.40 3.33
176 177 1.066908 CGCACATGGTTCAACCTTTGT 59.933 47.619 8.40 8.92 39.58 2.83
177 178 1.769733 CGCACATGGTTCAACCTTTG 58.230 50.000 8.40 8.26 39.58 2.77
178 179 0.031994 GCGCACATGGTTCAACCTTT 59.968 50.000 8.40 0.00 39.58 3.11
179 180 0.823356 AGCGCACATGGTTCAACCTT 60.823 50.000 11.47 0.00 39.58 3.50
180 181 0.823356 AAGCGCACATGGTTCAACCT 60.823 50.000 11.47 0.00 39.58 3.50
181 182 0.664166 CAAGCGCACATGGTTCAACC 60.664 55.000 11.47 0.00 39.22 3.77
182 183 0.030638 ACAAGCGCACATGGTTCAAC 59.969 50.000 11.47 0.00 0.00 3.18
183 184 0.030504 CACAAGCGCACATGGTTCAA 59.969 50.000 11.47 0.00 0.00 2.69
184 185 1.653667 CACAAGCGCACATGGTTCA 59.346 52.632 11.47 0.00 0.00 3.18
185 186 1.081242 CCACAAGCGCACATGGTTC 60.081 57.895 11.47 0.00 0.00 3.62
186 187 0.895100 ATCCACAAGCGCACATGGTT 60.895 50.000 19.46 11.31 33.67 3.67
187 188 0.035534 TATCCACAAGCGCACATGGT 60.036 50.000 19.46 11.71 33.67 3.55
188 189 1.093972 TTATCCACAAGCGCACATGG 58.906 50.000 11.47 14.01 0.00 3.66
189 190 2.917701 TTTATCCACAAGCGCACATG 57.082 45.000 11.47 8.37 0.00 3.21
190 191 2.480073 GCATTTATCCACAAGCGCACAT 60.480 45.455 11.47 0.00 0.00 3.21
191 192 1.135431 GCATTTATCCACAAGCGCACA 60.135 47.619 11.47 0.00 0.00 4.57
192 193 1.135431 TGCATTTATCCACAAGCGCAC 60.135 47.619 11.47 0.00 0.00 5.34
193 194 1.132834 CTGCATTTATCCACAAGCGCA 59.867 47.619 11.47 0.00 0.00 6.09
194 195 1.534595 CCTGCATTTATCCACAAGCGC 60.535 52.381 0.00 0.00 0.00 5.92
195 196 2.016318 TCCTGCATTTATCCACAAGCG 58.984 47.619 0.00 0.00 0.00 4.68
196 197 3.887716 AGATCCTGCATTTATCCACAAGC 59.112 43.478 0.00 0.00 0.00 4.01
197 198 4.212847 CGAGATCCTGCATTTATCCACAAG 59.787 45.833 0.00 0.00 0.00 3.16
213 214 2.029844 GCTTATGCCGGCGAGATCC 61.030 63.158 23.90 4.37 0.00 3.36
226 227 0.098376 GTCGTCGTCACGGAGCTTAT 59.902 55.000 0.00 0.00 46.70 1.73
229 230 3.735029 GGTCGTCGTCACGGAGCT 61.735 66.667 0.00 0.00 46.70 4.09
233 234 2.086426 CATGTGGTCGTCGTCACGG 61.086 63.158 0.00 7.38 46.70 4.94
262 263 4.041198 CCTCGACCTCTCCTTATCTCTACT 59.959 50.000 0.00 0.00 0.00 2.57
285 286 1.190643 CTCCCAGACAAGACCTCCTC 58.809 60.000 0.00 0.00 0.00 3.71
304 305 2.368011 GGTGACCTAGGCACTCCCC 61.368 68.421 25.60 9.27 41.75 4.81
310 311 0.981183 AAACGATGGTGACCTAGGCA 59.019 50.000 9.30 5.14 0.00 4.75
350 351 0.600255 GGTTATCCCCATCGTCGCAG 60.600 60.000 0.00 0.00 0.00 5.18
370 371 4.899239 CGGGTCCGCTGCTCATCC 62.899 72.222 0.00 0.00 0.00 3.51
408 409 2.152699 CGATCTGCGCGAACTTCGT 61.153 57.895 12.10 0.00 42.81 3.85
409 410 2.152699 ACGATCTGCGCGAACTTCG 61.153 57.895 12.10 15.13 46.04 3.79
412 413 2.507102 CCACGATCTGCGCGAACT 60.507 61.111 12.10 0.00 46.04 3.01
414 415 3.699955 CTCCCACGATCTGCGCGAA 62.700 63.158 12.10 0.00 46.04 4.70
419 420 0.383949 GTCTCTCTCCCACGATCTGC 59.616 60.000 0.00 0.00 0.00 4.26
420 421 0.660488 CGTCTCTCTCCCACGATCTG 59.340 60.000 0.00 0.00 35.49 2.90
422 423 0.941542 CTCGTCTCTCTCCCACGATC 59.058 60.000 0.00 0.00 41.47 3.69
440 441 1.306970 CTACCCCTCACCGACCTCT 59.693 63.158 0.00 0.00 0.00 3.69
456 457 2.674754 CCAAGAAAGCCGCCCCTA 59.325 61.111 0.00 0.00 0.00 3.53
472 473 2.028733 CAAACCATGCGGCAAAGCC 61.029 57.895 6.82 0.00 46.75 4.35
482 483 3.426191 CACAAGAACAATCGCAAACCATG 59.574 43.478 0.00 0.00 0.00 3.66
496 497 7.703328 TGAATGTCTTACTTTTCCACAAGAAC 58.297 34.615 0.00 0.00 32.95 3.01
527 528 2.154462 CAACACATTCGAAGCCCTTCT 58.846 47.619 3.35 0.00 37.44 2.85
528 529 1.401539 GCAACACATTCGAAGCCCTTC 60.402 52.381 3.35 0.00 36.29 3.46
530 531 0.537143 TGCAACACATTCGAAGCCCT 60.537 50.000 3.35 0.00 0.00 5.19
541 621 2.682856 GACCAAACTCTCTTGCAACACA 59.317 45.455 0.00 0.00 0.00 3.72
543 623 1.939934 CGACCAAACTCTCTTGCAACA 59.060 47.619 0.00 0.00 0.00 3.33
548 628 2.224066 ACTGTCCGACCAAACTCTCTTG 60.224 50.000 0.00 0.00 0.00 3.02
551 631 1.068741 ACACTGTCCGACCAAACTCTC 59.931 52.381 0.00 0.00 0.00 3.20
587 674 1.069978 TGAGATGTTCACAGCCGTTGA 59.930 47.619 0.00 0.00 31.57 3.18
589 676 1.609061 CCTGAGATGTTCACAGCCGTT 60.609 52.381 0.00 0.00 34.41 4.44
601 688 6.037281 CACTCTTTTGTCATGATCCTGAGATG 59.963 42.308 16.77 0.00 30.90 2.90
602 689 6.114089 CACTCTTTTGTCATGATCCTGAGAT 58.886 40.000 16.77 0.00 34.57 2.75
604 691 4.094590 GCACTCTTTTGTCATGATCCTGAG 59.905 45.833 0.00 6.44 0.00 3.35
605 692 4.005650 GCACTCTTTTGTCATGATCCTGA 58.994 43.478 0.00 0.00 0.00 3.86
606 693 3.128242 GGCACTCTTTTGTCATGATCCTG 59.872 47.826 0.00 0.00 0.00 3.86
607 694 3.245016 TGGCACTCTTTTGTCATGATCCT 60.245 43.478 0.00 0.00 0.00 3.24
609 696 4.771590 TTGGCACTCTTTTGTCATGATC 57.228 40.909 0.00 0.00 29.27 2.92
610 697 5.733620 AATTGGCACTCTTTTGTCATGAT 57.266 34.783 0.00 0.00 29.27 2.45
611 698 5.769662 AGTAATTGGCACTCTTTTGTCATGA 59.230 36.000 0.00 0.00 29.27 3.07
612 699 6.017400 AGTAATTGGCACTCTTTTGTCATG 57.983 37.500 0.00 0.00 29.27 3.07
613 700 7.759489 TTAGTAATTGGCACTCTTTTGTCAT 57.241 32.000 0.00 0.00 29.27 3.06
614 701 7.575414 TTTAGTAATTGGCACTCTTTTGTCA 57.425 32.000 0.00 0.00 0.00 3.58
617 704 6.251376 GCGATTTAGTAATTGGCACTCTTTTG 59.749 38.462 6.84 0.00 0.00 2.44
618 705 6.322491 GCGATTTAGTAATTGGCACTCTTTT 58.678 36.000 6.84 0.00 0.00 2.27
622 709 4.210832 GGCGATTTAGTAATTGGCACTC 57.789 45.455 12.05 0.00 45.52 3.51
628 715 6.795399 ACTGGAAATGGCGATTTAGTAATTG 58.205 36.000 6.67 0.00 31.58 2.32
1283 1418 2.205074 GCAGATAGGAACATGACACGG 58.795 52.381 0.00 0.00 0.00 4.94
1284 1419 2.892374 TGCAGATAGGAACATGACACG 58.108 47.619 0.00 0.00 0.00 4.49
1298 1433 6.710597 AACAGATTAATGAGCAATGCAGAT 57.289 33.333 8.35 0.00 0.00 2.90
1332 1487 3.693085 CAGATGTACAATGCTTGCCTCTT 59.307 43.478 0.00 0.00 0.00 2.85
1352 1511 4.778534 TCTTCACGGGTAAAGAGTACAG 57.221 45.455 0.00 0.00 0.00 2.74
1366 1525 3.941483 AGATGCCAGGTAAATTCTTCACG 59.059 43.478 0.00 0.00 0.00 4.35
1416 1575 5.523916 GGCATTACTGTACTGGTATCAACAG 59.476 44.000 6.32 6.32 43.90 3.16
1494 1653 8.764524 ATCTTGCTTTACACTAACAGTTAGAG 57.235 34.615 24.59 19.26 36.73 2.43
1509 1668 6.147864 AGCAAAGTGTGAAATCTTGCTTTA 57.852 33.333 1.91 0.00 30.41 1.85
1529 1688 6.492429 ACATAGTTATATACTCCGTGGAAGCA 59.508 38.462 0.00 0.00 38.33 3.91
1530 1689 6.921914 ACATAGTTATATACTCCGTGGAAGC 58.078 40.000 0.00 0.00 38.33 3.86
1531 1690 9.837525 GTTACATAGTTATATACTCCGTGGAAG 57.162 37.037 0.00 0.00 38.33 3.46
1534 1693 8.345724 AGGTTACATAGTTATATACTCCGTGG 57.654 38.462 0.00 0.00 38.33 4.94
1555 1714 3.384789 GCCAAGAAAGTTCCTTGAAGGTT 59.615 43.478 11.60 0.00 42.57 3.50
1648 1808 5.060506 TCCTTATTACAATGGTGGTATGCG 58.939 41.667 0.00 0.00 0.00 4.73
1859 2019 0.111061 AAACAGGCACAGGCTCATCA 59.889 50.000 0.00 0.00 40.87 3.07
1950 2110 4.574892 TGCACAGCTACAGCAAGTTAATA 58.425 39.130 3.70 0.00 45.16 0.98
2040 2200 4.695455 GTGGTAAATGATATGATGTCCCCG 59.305 45.833 0.00 0.00 0.00 5.73
2137 2301 2.487265 CCAGGTACAGGCCAATGGATAC 60.487 54.545 5.01 0.00 0.00 2.24
2168 2332 2.706339 ATAGAGAACAGCAAGCCAGG 57.294 50.000 0.00 0.00 0.00 4.45
2465 2646 2.780014 GCGAAATGTGATGAGCAAATCG 59.220 45.455 0.00 0.00 33.88 3.34
2484 2665 0.179225 GAACATGCGGTGTAGTTGCG 60.179 55.000 0.00 0.00 41.14 4.85
2679 2862 3.645053 AGATCATGGAGATACAGGGGT 57.355 47.619 0.00 0.00 37.00 4.95
2695 2878 9.837525 CTGCATGGATTTTAGCTAAATAAGATC 57.162 33.333 19.27 17.17 36.59 2.75
2704 2887 3.137176 AGCTCCTGCATGGATTTTAGCTA 59.863 43.478 9.84 0.00 45.16 3.32
2790 2973 1.808945 ACCTTTTCATGCTGCTCTTCG 59.191 47.619 0.00 0.00 0.00 3.79
2832 3015 9.531942 CATATATCTTGCAAAACCATAAGCAAA 57.468 29.630 0.00 0.00 45.18 3.68
2848 3031 8.579863 TGATATGCGGGATACTCATATATCTTG 58.420 37.037 0.00 0.00 40.30 3.02
2862 3045 1.140312 AACCCTGTGATATGCGGGAT 58.860 50.000 0.00 0.00 39.08 3.85
2864 3047 2.859165 ATAACCCTGTGATATGCGGG 57.141 50.000 0.00 0.00 42.53 6.13
3049 3233 9.695526 CTGAAAACAGATGGACAATTTTAATCA 57.304 29.630 0.00 0.00 0.00 2.57
3102 3286 1.204146 TACAGGGAAGGGCAGTCATC 58.796 55.000 0.00 0.00 0.00 2.92
3176 3360 6.266323 TGCTCGAGATAAGAACTTGATGTAC 58.734 40.000 18.75 0.00 0.00 2.90
3455 3639 6.953520 ACCCAGGAATTTTTCACAGATTATGA 59.046 34.615 0.00 0.00 0.00 2.15
3481 3666 9.650714 AGAATTCCTATCAAAATCATGATTCCA 57.349 29.630 20.95 8.63 40.44 3.53
3553 3741 3.857157 AACTTAGACTTGGCCTGTTCA 57.143 42.857 3.32 0.00 0.00 3.18
3593 3781 3.621558 GTTAACCTTTCATCCCTGGAGG 58.378 50.000 0.00 0.00 34.31 4.30
3931 4122 6.920569 ATCACGAACATGAATTAGTTACCC 57.079 37.500 0.00 0.00 30.82 3.69
3996 4187 2.357952 GAGCAAACGGGTGTCTTTTTCT 59.642 45.455 0.00 0.00 0.00 2.52
4096 4287 4.155462 AGAATGCAGCAGTTGAAGTACATG 59.845 41.667 0.00 0.00 0.00 3.21
4097 4288 4.330250 AGAATGCAGCAGTTGAAGTACAT 58.670 39.130 0.00 0.00 0.00 2.29
4240 4431 6.857956 AGTTGTACAAAGTTTAACATGTGCA 58.142 32.000 10.51 16.04 36.77 4.57
4538 4734 5.009854 ACAACTTCAAACCCATGAACAAG 57.990 39.130 0.00 0.00 35.55 3.16
4539 4735 6.322456 TGATACAACTTCAAACCCATGAACAA 59.678 34.615 0.00 0.00 35.55 2.83
4603 4800 0.468771 GCCCCTCAAAGGATGGATGG 60.469 60.000 0.00 0.00 37.67 3.51
4604 4801 0.554792 AGCCCCTCAAAGGATGGATG 59.445 55.000 0.00 0.00 37.67 3.51
4826 5023 3.315191 AGTTCCACAAAATTGGACTCACG 59.685 43.478 0.00 0.00 45.80 4.35
4987 5184 6.285224 TCTCATAGTTCTCTTCGTCCTCTAG 58.715 44.000 0.00 0.00 0.00 2.43
5064 5261 1.378531 GCTTTACACGGGCATCATCA 58.621 50.000 0.00 0.00 0.00 3.07
5084 5281 3.240861 CGTATCTTTTGCGTAGTCTGCTC 59.759 47.826 0.00 0.00 0.00 4.26
5112 5309 3.435186 GCTGAAGCACCCGAAGCC 61.435 66.667 0.00 0.00 41.59 4.35
5175 5372 0.665670 CCTGCTGCTCGGTCATATCG 60.666 60.000 0.00 0.00 0.00 2.92
5480 5677 5.221843 TGTTGTTCCTCATTAACTAGTGGCT 60.222 40.000 0.00 0.00 0.00 4.75
6063 6260 6.317893 ACAAGGAGACACAACGATAAAAGTTT 59.682 34.615 0.00 0.00 0.00 2.66
6074 6271 2.565841 AGAAGCACAAGGAGACACAAC 58.434 47.619 0.00 0.00 0.00 3.32
6112 6309 9.605275 CAAGAACTAGATATTTCAGATTGGACA 57.395 33.333 0.00 0.00 0.00 4.02
6149 6359 1.647702 GGAAGACGTAGAACGAAAGCG 59.352 52.381 6.44 0.00 46.05 4.68
6152 6362 6.366877 CCATTTTAGGAAGACGTAGAACGAAA 59.633 38.462 6.44 0.00 46.05 3.46
6175 6385 8.976353 AGTAATAACAATTGCCATAATGTTCCA 58.024 29.630 5.05 0.00 37.25 3.53
6180 6390 8.632679 ACTGGAGTAATAACAATTGCCATAATG 58.367 33.333 5.05 0.00 0.00 1.90
6476 6687 4.847990 CCCATGGGTTTTGTAGGTACTA 57.152 45.455 23.93 0.00 41.75 1.82
6489 6701 6.786843 ATCTTGAGATAAATACCCATGGGT 57.213 37.500 37.92 37.92 41.56 4.51
6503 6715 9.756571 ATTCCTACCGTTATACTATCTTGAGAT 57.243 33.333 0.00 0.00 38.51 2.75
6507 6719 8.582437 TCCAATTCCTACCGTTATACTATCTTG 58.418 37.037 0.00 0.00 0.00 3.02
6572 6784 6.072119 TCGACTGAGATTTAGCAAGACTGTAA 60.072 38.462 0.00 0.00 0.00 2.41
6602 6814 5.047660 ACTGAGACTGAGACATAACCAAGTC 60.048 44.000 0.00 0.00 35.02 3.01
6603 6815 4.835615 ACTGAGACTGAGACATAACCAAGT 59.164 41.667 0.00 0.00 0.00 3.16
6604 6816 5.398603 ACTGAGACTGAGACATAACCAAG 57.601 43.478 0.00 0.00 0.00 3.61
6605 6817 4.082733 CGACTGAGACTGAGACATAACCAA 60.083 45.833 0.00 0.00 0.00 3.67
6606 6818 3.440522 CGACTGAGACTGAGACATAACCA 59.559 47.826 0.00 0.00 0.00 3.67
6607 6819 3.690139 TCGACTGAGACTGAGACATAACC 59.310 47.826 0.00 0.00 0.00 2.85
6608 6820 4.948608 TCGACTGAGACTGAGACATAAC 57.051 45.455 0.00 0.00 0.00 1.89
6609 6821 4.944317 ACATCGACTGAGACTGAGACATAA 59.056 41.667 0.00 0.00 0.00 1.90
6610 6822 4.518249 ACATCGACTGAGACTGAGACATA 58.482 43.478 0.00 0.00 0.00 2.29
6611 6823 3.351740 ACATCGACTGAGACTGAGACAT 58.648 45.455 0.00 0.00 0.00 3.06
6612 6824 2.784347 ACATCGACTGAGACTGAGACA 58.216 47.619 0.00 0.00 0.00 3.41
6613 6825 3.057876 ACAACATCGACTGAGACTGAGAC 60.058 47.826 0.00 0.00 0.00 3.36
6614 6826 3.149981 ACAACATCGACTGAGACTGAGA 58.850 45.455 0.00 0.00 0.00 3.27
6615 6827 3.567576 ACAACATCGACTGAGACTGAG 57.432 47.619 0.00 0.00 0.00 3.35
6616 6828 5.183140 TGAATACAACATCGACTGAGACTGA 59.817 40.000 0.00 0.00 0.00 3.41
6617 6829 5.402398 TGAATACAACATCGACTGAGACTG 58.598 41.667 0.00 0.00 0.00 3.51
6618 6830 5.644977 TGAATACAACATCGACTGAGACT 57.355 39.130 0.00 0.00 0.00 3.24
6625 6837 7.706281 AAGATCTCATGAATACAACATCGAC 57.294 36.000 0.00 0.00 0.00 4.20
6697 6909 6.014584 ACCAAGTCTGACATGACATGTAAGTA 60.015 38.462 25.93 14.08 45.03 2.24
6698 6910 5.221722 ACCAAGTCTGACATGACATGTAAGT 60.222 40.000 25.93 13.68 45.03 2.24
6699 6911 5.240891 ACCAAGTCTGACATGACATGTAAG 58.759 41.667 22.65 22.65 45.03 2.34
6700 6912 5.227569 ACCAAGTCTGACATGACATGTAA 57.772 39.130 20.85 13.14 45.03 2.41
6701 6913 4.890158 ACCAAGTCTGACATGACATGTA 57.110 40.909 20.85 3.18 45.03 2.29
6703 6915 5.122869 CCTTAACCAAGTCTGACATGACATG 59.877 44.000 14.02 14.02 39.27 3.21
6704 6916 5.248640 CCTTAACCAAGTCTGACATGACAT 58.751 41.667 14.09 3.21 39.27 3.06
6705 6917 4.641396 CCTTAACCAAGTCTGACATGACA 58.359 43.478 14.09 0.00 39.27 3.58
6706 6918 3.437049 GCCTTAACCAAGTCTGACATGAC 59.563 47.826 14.09 0.00 37.23 3.06
6707 6919 3.674997 GCCTTAACCAAGTCTGACATGA 58.325 45.455 14.09 0.00 0.00 3.07
6708 6920 2.416547 CGCCTTAACCAAGTCTGACATG 59.583 50.000 10.88 8.34 0.00 3.21
6709 6921 2.301870 TCGCCTTAACCAAGTCTGACAT 59.698 45.455 10.88 0.00 0.00 3.06
6710 6922 1.689813 TCGCCTTAACCAAGTCTGACA 59.310 47.619 10.88 0.00 0.00 3.58
6711 6923 2.338500 CTCGCCTTAACCAAGTCTGAC 58.662 52.381 0.00 0.00 0.00 3.51
6735 6947 1.376553 GTTCAGGGAGCCAGCAGTC 60.377 63.158 0.00 0.00 0.00 3.51
6736 6948 1.708993 TTGTTCAGGGAGCCAGCAGT 61.709 55.000 0.00 0.00 0.00 4.40
6737 6949 0.959372 CTTGTTCAGGGAGCCAGCAG 60.959 60.000 0.00 0.00 0.00 4.24
6738 6950 1.073722 CTTGTTCAGGGAGCCAGCA 59.926 57.895 0.00 0.00 0.00 4.41
6739 6951 2.338785 GCTTGTTCAGGGAGCCAGC 61.339 63.158 0.00 0.00 0.00 4.85
6740 6952 0.959372 CAGCTTGTTCAGGGAGCCAG 60.959 60.000 0.00 0.00 37.11 4.85
6741 6953 1.073722 CAGCTTGTTCAGGGAGCCA 59.926 57.895 0.00 0.00 37.11 4.75
6742 6954 0.250901 TTCAGCTTGTTCAGGGAGCC 60.251 55.000 0.00 0.00 37.11 4.70
6743 6955 1.471684 CATTCAGCTTGTTCAGGGAGC 59.528 52.381 0.00 0.00 36.68 4.70
6744 6956 2.486982 CACATTCAGCTTGTTCAGGGAG 59.513 50.000 0.00 0.00 0.00 4.30
6765 6977 6.583806 CACAAACTGAAAAGGCTATCAATCAC 59.416 38.462 4.70 0.00 0.00 3.06
6766 6978 6.489700 TCACAAACTGAAAAGGCTATCAATCA 59.510 34.615 4.70 0.00 0.00 2.57
6767 6979 6.913170 TCACAAACTGAAAAGGCTATCAATC 58.087 36.000 4.70 0.00 0.00 2.67
6768 6980 6.716628 TCTCACAAACTGAAAAGGCTATCAAT 59.283 34.615 4.70 0.00 0.00 2.57
6769 6981 6.061441 TCTCACAAACTGAAAAGGCTATCAA 58.939 36.000 4.70 0.00 0.00 2.57
6770 6982 5.620206 TCTCACAAACTGAAAAGGCTATCA 58.380 37.500 3.28 3.28 0.00 2.15
6771 6983 6.749923 ATCTCACAAACTGAAAAGGCTATC 57.250 37.500 0.00 0.00 0.00 2.08
6772 6984 7.148407 CGTAATCTCACAAACTGAAAAGGCTAT 60.148 37.037 0.00 0.00 0.00 2.97
6773 6985 6.147164 CGTAATCTCACAAACTGAAAAGGCTA 59.853 38.462 0.00 0.00 0.00 3.93
6774 6986 5.049405 CGTAATCTCACAAACTGAAAAGGCT 60.049 40.000 0.00 0.00 0.00 4.58
6775 6987 5.147162 CGTAATCTCACAAACTGAAAAGGC 58.853 41.667 0.00 0.00 0.00 4.35
6776 6988 5.147162 GCGTAATCTCACAAACTGAAAAGG 58.853 41.667 0.00 0.00 0.00 3.11
6777 6989 5.747565 TGCGTAATCTCACAAACTGAAAAG 58.252 37.500 0.00 0.00 0.00 2.27
6778 6990 5.743026 TGCGTAATCTCACAAACTGAAAA 57.257 34.783 0.00 0.00 0.00 2.29
6779 6991 5.525745 TCTTGCGTAATCTCACAAACTGAAA 59.474 36.000 0.00 0.00 0.00 2.69
6780 6992 5.050363 GTCTTGCGTAATCTCACAAACTGAA 60.050 40.000 0.00 0.00 0.00 3.02
6781 6993 4.447724 GTCTTGCGTAATCTCACAAACTGA 59.552 41.667 0.00 0.00 0.00 3.41
6782 6994 4.211164 TGTCTTGCGTAATCTCACAAACTG 59.789 41.667 0.00 0.00 0.00 3.16
6783 6995 4.377021 TGTCTTGCGTAATCTCACAAACT 58.623 39.130 0.00 0.00 0.00 2.66
6784 6996 4.725556 TGTCTTGCGTAATCTCACAAAC 57.274 40.909 0.00 0.00 0.00 2.93
6785 6997 7.609760 AATATGTCTTGCGTAATCTCACAAA 57.390 32.000 0.00 0.00 0.00 2.83
6786 6998 7.609760 AAATATGTCTTGCGTAATCTCACAA 57.390 32.000 0.00 0.00 0.00 3.33
6787 6999 8.194769 TCTAAATATGTCTTGCGTAATCTCACA 58.805 33.333 0.00 0.00 0.00 3.58
6788 7000 8.575565 TCTAAATATGTCTTGCGTAATCTCAC 57.424 34.615 0.00 0.00 0.00 3.51
6789 7001 9.031360 GTTCTAAATATGTCTTGCGTAATCTCA 57.969 33.333 0.00 0.00 0.00 3.27
6790 7002 8.488764 GGTTCTAAATATGTCTTGCGTAATCTC 58.511 37.037 0.00 0.00 0.00 2.75
6791 7003 7.985184 TGGTTCTAAATATGTCTTGCGTAATCT 59.015 33.333 0.00 0.00 0.00 2.40
6792 7004 8.138365 TGGTTCTAAATATGTCTTGCGTAATC 57.862 34.615 0.00 0.00 0.00 1.75
6793 7005 8.677148 ATGGTTCTAAATATGTCTTGCGTAAT 57.323 30.769 0.00 0.00 0.00 1.89
6794 7006 7.985184 AGATGGTTCTAAATATGTCTTGCGTAA 59.015 33.333 0.00 0.00 0.00 3.18
6795 7007 7.497595 AGATGGTTCTAAATATGTCTTGCGTA 58.502 34.615 0.00 0.00 0.00 4.42
6796 7008 6.349300 AGATGGTTCTAAATATGTCTTGCGT 58.651 36.000 0.00 0.00 0.00 5.24
6797 7009 6.851222 AGATGGTTCTAAATATGTCTTGCG 57.149 37.500 0.00 0.00 0.00 4.85
6798 7010 8.677300 TCAAAGATGGTTCTAAATATGTCTTGC 58.323 33.333 0.00 0.00 0.00 4.01
6821 7033 3.805066 TGGGGTGAATGAGTGAATCAA 57.195 42.857 0.00 0.00 42.53 2.57
6840 7052 4.316025 TGGAAATCCCCTACTCCTTTTG 57.684 45.455 0.00 0.00 34.29 2.44
6901 7113 3.116862 AGGAACGGAGGGAGTATATTCCA 60.117 47.826 15.53 0.00 39.09 3.53
6906 7118 6.856757 AGTATTTAGGAACGGAGGGAGTATA 58.143 40.000 0.00 0.00 0.00 1.47
6910 7122 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
6911 7123 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
6912 7124 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
6913 7125 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
6914 7126 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
6915 7127 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
6916 7128 7.010275 GCTAGAAAGACAAGTATTTAGGAACGG 59.990 40.741 0.00 0.00 0.00 4.44
6917 7129 7.010275 GGCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 0.00 0.00 0.00 3.95
6918 7130 7.822822 TGGCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 0.00 0.00 38.01 3.62
6919 7131 7.913789 TGGCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 0.00 0.00 38.01 3.36
6920 7132 7.490657 TGGCTAGAAAGACAAGTATTTAGGA 57.509 36.000 0.00 0.00 38.01 2.94
6921 7133 8.738645 AATGGCTAGAAAGACAAGTATTTAGG 57.261 34.615 0.00 0.00 46.32 2.69
6923 7135 9.733556 TGAAATGGCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 46.32 1.40
6924 7136 8.635765 TGAAATGGCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 46.32 1.40
6925 7137 8.635765 TTGAAATGGCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 46.32 1.89
6926 7138 8.635765 TTTGAAATGGCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 46.32 2.12
6927 7139 8.514594 CATTTGAAATGGCTAGAAAGACAAGTA 58.485 33.333 9.98 0.00 46.32 2.24
6928 7140 6.959639 TTTGAAATGGCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 46.32 3.16
6929 7141 7.596494 TCATTTGAAATGGCTAGAAAGACAAG 58.404 34.615 17.01 0.00 46.32 3.16
6930 7142 7.523293 TCATTTGAAATGGCTAGAAAGACAA 57.477 32.000 17.01 0.00 46.32 3.18
6931 7143 8.125978 ATTCATTTGAAATGGCTAGAAAGACA 57.874 30.769 17.01 0.00 39.56 3.41
6940 7152 9.897744 CGTATGTAATATTCATTTGAAATGGCT 57.102 29.630 17.01 7.94 37.61 4.75
6941 7153 9.128107 CCGTATGTAATATTCATTTGAAATGGC 57.872 33.333 17.01 1.82 37.61 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.