Multiple sequence alignment - TraesCS4D01G316900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G316900 chr4D 100.000 3668 0 0 1 3668 482157333 482161000 0.000000e+00 6774.0
1 TraesCS4D01G316900 chr5A 89.637 2924 120 73 108 2961 660443996 660441186 0.000000e+00 3552.0
2 TraesCS4D01G316900 chr5A 92.778 180 11 2 3113 3291 382566802 382566624 3.630000e-65 259.0
3 TraesCS4D01G316900 chr4B 93.770 2183 68 24 108 2254 611852326 611854476 0.000000e+00 3216.0
4 TraesCS4D01G316900 chr4B 91.506 624 18 20 2364 2960 611854628 611855243 0.000000e+00 826.0
5 TraesCS4D01G316900 chr4B 87.960 299 13 8 3277 3555 611855248 611855543 7.590000e-87 331.0
6 TraesCS4D01G316900 chr4B 91.758 182 14 1 3110 3291 145214654 145214834 6.080000e-63 252.0
7 TraesCS4D01G316900 chr4B 90.411 73 3 3 2252 2321 611854599 611854670 3.900000e-15 93.5
8 TraesCS4D01G316900 chr6D 86.220 254 26 6 3032 3278 470958771 470958520 2.170000e-67 267.0
9 TraesCS4D01G316900 chr6D 92.265 181 10 4 3113 3293 206560274 206560450 1.690000e-63 254.0
10 TraesCS4D01G316900 chr6D 97.744 133 3 0 3536 3668 397169286 397169418 2.850000e-56 230.0
11 TraesCS4D01G316900 chr6D 100.000 106 0 0 1 106 114768304 114768199 2.890000e-46 196.0
12 TraesCS4D01G316900 chr6D 100.000 106 0 0 1 106 201536524 201536419 2.890000e-46 196.0
13 TraesCS4D01G316900 chr6D 100.000 106 0 0 1 106 450007572 450007677 2.890000e-46 196.0
14 TraesCS4D01G316900 chr6D 99.057 106 1 0 1 106 232770665 232770770 1.340000e-44 191.0
15 TraesCS4D01G316900 chr6D 99.057 106 1 0 1 106 301274292 301274397 1.340000e-44 191.0
16 TraesCS4D01G316900 chr6D 99.057 106 1 0 1 106 451070521 451070416 1.340000e-44 191.0
17 TraesCS4D01G316900 chr6D 99.057 106 1 0 1 106 463217263 463217368 1.340000e-44 191.0
18 TraesCS4D01G316900 chr6D 99.065 107 0 1 1 106 470957821 470957927 1.340000e-44 191.0
19 TraesCS4D01G316900 chr6D 93.827 81 5 0 3335 3415 155601967 155602047 4.970000e-24 122.0
20 TraesCS4D01G316900 chr7D 93.678 174 10 1 3113 3286 39001449 39001277 3.630000e-65 259.0
21 TraesCS4D01G316900 chr7D 100.000 106 0 0 1 106 587546529 587546634 2.890000e-46 196.0
22 TraesCS4D01G316900 chr7D 100.000 106 0 0 1 106 604582844 604582949 2.890000e-46 196.0
23 TraesCS4D01G316900 chr7D 92.857 84 5 1 3331 3413 81361903 81361820 1.790000e-23 121.0
24 TraesCS4D01G316900 chr6B 93.678 174 9 2 3109 3282 211161646 211161475 3.630000e-65 259.0
25 TraesCS4D01G316900 chr6B 95.062 81 4 0 3335 3415 278674619 278674699 1.070000e-25 128.0
26 TraesCS4D01G316900 chr6A 92.265 181 10 4 3113 3293 276304325 276304149 1.690000e-63 254.0
27 TraesCS4D01G316900 chr6A 95.062 81 4 0 3335 3415 209391347 209391427 1.070000e-25 128.0
28 TraesCS4D01G316900 chr3B 92.222 180 12 2 3106 3285 621150210 621150033 1.690000e-63 254.0
29 TraesCS4D01G316900 chr3B 85.207 169 16 6 2953 3112 20000054 19999886 8.150000e-37 165.0
30 TraesCS4D01G316900 chr3B 84.524 168 17 5 2958 3116 821851329 821851162 1.360000e-34 158.0
31 TraesCS4D01G316900 chr2B 93.529 170 10 1 3122 3291 736423907 736423739 6.080000e-63 252.0
32 TraesCS4D01G316900 chr2B 83.523 176 17 8 2950 3114 650282203 650282377 1.760000e-33 154.0
33 TraesCS4D01G316900 chr3D 99.219 128 1 0 3541 3668 459212037 459211910 7.920000e-57 231.0
34 TraesCS4D01G316900 chr3D 85.119 168 16 5 2957 3115 132929902 132930069 2.930000e-36 163.0
35 TraesCS4D01G316900 chr2D 97.778 135 1 2 3534 3668 270844047 270843915 7.920000e-57 231.0
36 TraesCS4D01G316900 chr2D 97.080 137 2 1 3534 3668 44329490 44329626 2.850000e-56 230.0
37 TraesCS4D01G316900 chr2D 100.000 106 0 0 1 106 31669665 31669560 2.890000e-46 196.0
38 TraesCS4D01G316900 chr2D 100.000 106 0 0 1 106 197865221 197865326 2.890000e-46 196.0
39 TraesCS4D01G316900 chr2D 93.421 76 5 0 3338 3413 649145936 649145861 2.990000e-21 113.0
40 TraesCS4D01G316900 chr1D 99.219 128 1 0 3541 3668 410734755 410734628 7.920000e-57 231.0
41 TraesCS4D01G316900 chr1D 98.462 130 1 1 3539 3668 208825844 208825716 1.020000e-55 228.0
42 TraesCS4D01G316900 chr1D 77.576 330 37 19 2959 3278 267804304 267804002 8.150000e-37 165.0
43 TraesCS4D01G316900 chr1D 87.324 142 18 0 1491 1632 263072786 263072927 2.930000e-36 163.0
44 TraesCS4D01G316900 chr1D 90.110 91 9 0 1730 1820 263073046 263073136 6.430000e-23 119.0
45 TraesCS4D01G316900 chr1D 92.405 79 6 0 3335 3413 141705982 141706060 2.990000e-21 113.0
46 TraesCS4D01G316900 chr5D 97.059 136 2 2 3535 3668 486175125 486175260 1.020000e-55 228.0
47 TraesCS4D01G316900 chr5D 94.483 145 6 2 3526 3668 504063827 504063971 4.770000e-54 222.0
48 TraesCS4D01G316900 chr5D 100.000 106 0 0 1 106 481071339 481071234 2.890000e-46 196.0
49 TraesCS4D01G316900 chr5D 88.554 166 10 6 2958 3114 537178350 537178185 3.740000e-45 193.0
50 TraesCS4D01G316900 chr7A 91.975 162 10 3 3509 3668 556571236 556571396 1.330000e-54 224.0
51 TraesCS4D01G316900 chr7A 96.000 75 3 0 3337 3411 205123830 205123904 4.970000e-24 122.0
52 TraesCS4D01G316900 chr1B 83.884 242 24 10 1106 1344 348862312 348862541 2.220000e-52 217.0
53 TraesCS4D01G316900 chr1B 89.431 123 13 0 1491 1613 348862632 348862754 4.900000e-34 156.0
54 TraesCS4D01G316900 chr1B 90.110 91 9 0 1730 1820 348862893 348862983 6.430000e-23 119.0
55 TraesCS4D01G316900 chr1A 83.673 245 19 10 1106 1344 337150716 337150945 1.030000e-50 211.0
56 TraesCS4D01G316900 chr1A 88.028 142 17 0 1491 1632 337151038 337151179 6.300000e-38 169.0
57 TraesCS4D01G316900 chr1A 86.164 159 14 7 2962 3112 255753633 255753791 8.150000e-37 165.0
58 TraesCS4D01G316900 chr1A 91.209 91 8 0 1730 1820 337151304 337151394 1.380000e-24 124.0
59 TraesCS4D01G316900 chrUn 100.000 106 0 0 1 106 98338650 98338545 2.890000e-46 196.0
60 TraesCS4D01G316900 chrUn 99.029 103 1 0 4 106 21941754 21941856 6.260000e-43 185.0
61 TraesCS4D01G316900 chrUn 98.058 103 2 0 4 106 235914091 235913989 2.910000e-41 180.0
62 TraesCS4D01G316900 chrUn 95.283 106 5 0 1 106 50072318 50072423 6.300000e-38 169.0
63 TraesCS4D01G316900 chrUn 95.283 106 5 0 1 106 475007005 475007110 6.300000e-38 169.0
64 TraesCS4D01G316900 chrUn 95.050 101 5 0 6 106 17018801 17018901 3.790000e-35 159.0
65 TraesCS4D01G316900 chrUn 93.458 107 5 2 1 106 234336930 234336825 1.360000e-34 158.0
66 TraesCS4D01G316900 chrUn 93.396 106 7 0 1 106 303376373 303376478 1.360000e-34 158.0
67 TraesCS4D01G316900 chrUn 94.231 104 5 1 4 106 475007229 475007332 1.360000e-34 158.0
68 TraesCS4D01G316900 chrUn 92.857 84 5 1 3331 3413 341187276 341187359 1.790000e-23 121.0
69 TraesCS4D01G316900 chr3A 85.276 163 14 7 2955 3108 253228562 253228723 3.790000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G316900 chr4D 482157333 482161000 3667 False 6774.000 6774 100.00000 1 3668 1 chr4D.!!$F1 3667
1 TraesCS4D01G316900 chr5A 660441186 660443996 2810 True 3552.000 3552 89.63700 108 2961 1 chr5A.!!$R2 2853
2 TraesCS4D01G316900 chr4B 611852326 611855543 3217 False 1116.625 3216 90.91175 108 3555 4 chr4B.!!$F2 3447

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.107508 ATGAAGTGGGAGCACGGATG 60.108 55.000 0.00 0.00 0.00 3.51 F
90 91 0.765903 GATGGGAGCATGGAGAGGGA 60.766 60.000 0.00 0.00 0.00 4.20 F
91 92 0.767446 ATGGGAGCATGGAGAGGGAG 60.767 60.000 0.00 0.00 0.00 4.30 F
1405 1438 1.134699 TCAAGATCGCGAATCCTTGCT 60.135 47.619 28.75 8.91 34.67 3.91 F
2355 2565 0.815734 GTGCTGGCTTAGTCCGAGTA 59.184 55.000 0.00 0.00 0.00 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1640 1677 0.256464 GAGGTCGAGAGGAGGAGGAA 59.744 60.000 0.00 0.0 0.00 3.36 R
1873 1935 0.399806 TCGGTGGATGGATGGATGGA 60.400 55.000 0.00 0.0 0.00 3.41 R
2012 2086 1.069358 CTACCGAGGGAATTCAGAGCC 59.931 57.143 7.93 0.0 0.00 4.70 R
2613 2836 0.464193 TCTGCTGCTGCTGTTGTTGA 60.464 50.000 17.00 0.0 40.48 3.18 R
3507 3761 1.078759 CACGGATGCGTCACCTCTTC 61.079 60.000 10.14 0.0 0.00 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.978925 GGGGGAGATGATTAGATTAGAAAAGA 58.021 38.462 0.00 0.00 0.00 2.52
31 32 8.440771 GGGGGAGATGATTAGATTAGAAAAGAA 58.559 37.037 0.00 0.00 0.00 2.52
32 33 9.853177 GGGGAGATGATTAGATTAGAAAAGAAA 57.147 33.333 0.00 0.00 0.00 2.52
47 48 9.869757 TTAGAAAAGAAAAAGGGAAAAGAACAG 57.130 29.630 0.00 0.00 0.00 3.16
48 49 6.818644 AGAAAAGAAAAAGGGAAAAGAACAGC 59.181 34.615 0.00 0.00 0.00 4.40
49 50 4.672587 AGAAAAAGGGAAAAGAACAGCC 57.327 40.909 0.00 0.00 0.00 4.85
50 51 3.068165 AGAAAAAGGGAAAAGAACAGCCG 59.932 43.478 0.00 0.00 0.00 5.52
51 52 2.067365 AAAGGGAAAAGAACAGCCGT 57.933 45.000 0.00 0.00 0.00 5.68
52 53 2.943036 AAGGGAAAAGAACAGCCGTA 57.057 45.000 0.00 0.00 0.00 4.02
53 54 2.474410 AGGGAAAAGAACAGCCGTAG 57.526 50.000 0.00 0.00 0.00 3.51
67 68 3.669354 CGTAGGATGAAGTGGGAGC 57.331 57.895 0.00 0.00 0.00 4.70
68 69 0.824109 CGTAGGATGAAGTGGGAGCA 59.176 55.000 0.00 0.00 0.00 4.26
69 70 1.471676 CGTAGGATGAAGTGGGAGCAC 60.472 57.143 0.00 0.00 0.00 4.40
70 71 0.824109 TAGGATGAAGTGGGAGCACG 59.176 55.000 0.00 0.00 0.00 5.34
71 72 1.450312 GGATGAAGTGGGAGCACGG 60.450 63.158 0.00 0.00 0.00 4.94
72 73 1.596934 GATGAAGTGGGAGCACGGA 59.403 57.895 0.00 0.00 0.00 4.69
73 74 0.179000 GATGAAGTGGGAGCACGGAT 59.821 55.000 0.00 0.00 0.00 4.18
74 75 0.107508 ATGAAGTGGGAGCACGGATG 60.108 55.000 0.00 0.00 0.00 3.51
75 76 1.450312 GAAGTGGGAGCACGGATGG 60.450 63.158 0.00 0.00 0.00 3.51
76 77 2.876368 GAAGTGGGAGCACGGATGGG 62.876 65.000 0.00 0.00 0.00 4.00
77 78 3.399181 GTGGGAGCACGGATGGGA 61.399 66.667 0.00 0.00 0.00 4.37
78 79 3.083349 TGGGAGCACGGATGGGAG 61.083 66.667 0.00 0.00 0.00 4.30
79 80 4.554036 GGGAGCACGGATGGGAGC 62.554 72.222 0.00 0.00 0.00 4.70
80 81 3.785859 GGAGCACGGATGGGAGCA 61.786 66.667 0.00 0.00 0.00 4.26
81 82 2.507944 GAGCACGGATGGGAGCAT 59.492 61.111 0.00 0.00 0.00 3.79
82 83 1.890979 GAGCACGGATGGGAGCATG 60.891 63.158 0.00 0.00 0.00 4.06
83 84 2.903855 GCACGGATGGGAGCATGG 60.904 66.667 0.00 0.00 0.00 3.66
84 85 2.910360 CACGGATGGGAGCATGGA 59.090 61.111 0.00 0.00 0.00 3.41
85 86 1.227764 CACGGATGGGAGCATGGAG 60.228 63.158 0.00 0.00 0.00 3.86
86 87 1.383109 ACGGATGGGAGCATGGAGA 60.383 57.895 0.00 0.00 0.00 3.71
87 88 1.370437 CGGATGGGAGCATGGAGAG 59.630 63.158 0.00 0.00 0.00 3.20
88 89 1.759881 GGATGGGAGCATGGAGAGG 59.240 63.158 0.00 0.00 0.00 3.69
89 90 1.759881 GATGGGAGCATGGAGAGGG 59.240 63.158 0.00 0.00 0.00 4.30
90 91 0.765903 GATGGGAGCATGGAGAGGGA 60.766 60.000 0.00 0.00 0.00 4.20
91 92 0.767446 ATGGGAGCATGGAGAGGGAG 60.767 60.000 0.00 0.00 0.00 4.30
92 93 2.817056 GGGAGCATGGAGAGGGAGC 61.817 68.421 0.00 0.00 0.00 4.70
93 94 2.068821 GGAGCATGGAGAGGGAGCA 61.069 63.158 0.00 0.00 0.00 4.26
94 95 1.446791 GAGCATGGAGAGGGAGCAG 59.553 63.158 0.00 0.00 0.00 4.24
95 96 2.042404 GAGCATGGAGAGGGAGCAGG 62.042 65.000 0.00 0.00 0.00 4.85
96 97 2.509916 CATGGAGAGGGAGCAGGC 59.490 66.667 0.00 0.00 0.00 4.85
97 98 2.041762 ATGGAGAGGGAGCAGGCA 59.958 61.111 0.00 0.00 0.00 4.75
98 99 1.617536 ATGGAGAGGGAGCAGGCAA 60.618 57.895 0.00 0.00 0.00 4.52
99 100 1.633915 ATGGAGAGGGAGCAGGCAAG 61.634 60.000 0.00 0.00 0.00 4.01
100 101 2.124778 GAGAGGGAGCAGGCAAGC 60.125 66.667 0.00 0.00 0.00 4.01
101 102 3.695747 GAGAGGGAGCAGGCAAGCC 62.696 68.421 2.02 2.02 34.23 4.35
105 106 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
106 107 2.439156 GAGCAGGCAAGCCGGATT 60.439 61.111 15.46 0.00 41.95 3.01
150 151 3.402681 CCCACAGCCGTCCATCCT 61.403 66.667 0.00 0.00 0.00 3.24
343 344 3.809832 CGAGCTCACCAAAGAAAGAAAGA 59.190 43.478 15.40 0.00 0.00 2.52
512 524 1.595993 CCATCACCACCGTCTCGACT 61.596 60.000 0.00 0.00 0.00 4.18
589 606 3.248171 GCGCGAACGAGCAGGTAG 61.248 66.667 12.10 0.00 43.93 3.18
590 607 2.483745 CGCGAACGAGCAGGTAGA 59.516 61.111 0.00 0.00 43.93 2.59
591 608 1.583967 CGCGAACGAGCAGGTAGAG 60.584 63.158 0.00 0.00 43.93 2.43
592 609 1.226717 GCGAACGAGCAGGTAGAGG 60.227 63.158 0.00 0.00 37.05 3.69
593 610 1.935327 GCGAACGAGCAGGTAGAGGT 61.935 60.000 0.00 0.00 37.05 3.85
594 611 1.376543 CGAACGAGCAGGTAGAGGTA 58.623 55.000 0.00 0.00 0.00 3.08
1381 1414 4.610007 CGATCATCGCCTCAATCAATCAAC 60.610 45.833 0.00 0.00 31.14 3.18
1405 1438 1.134699 TCAAGATCGCGAATCCTTGCT 60.135 47.619 28.75 8.91 34.67 3.91
1455 1488 2.164219 GCTGCTTGCCTAAAATGTGCTA 59.836 45.455 0.00 0.00 35.15 3.49
1624 1659 1.448540 CGCGCAGATCAACCTCCTT 60.449 57.895 8.75 0.00 0.00 3.36
1771 1812 1.775962 GACGCAGAACAACGAGCTC 59.224 57.895 2.73 2.73 0.00 4.09
1873 1935 2.177531 CGTCAACGTCCGACCGAT 59.822 61.111 11.30 0.00 34.11 4.18
1875 1937 1.515736 GTCAACGTCCGACCGATCC 60.516 63.158 6.78 0.00 0.00 3.36
1941 2015 6.777213 ACATAGATGGTCCTTATCGTATCC 57.223 41.667 0.00 0.00 0.00 2.59
2009 2083 3.295273 TGTGCTCCGCTCACGACT 61.295 61.111 0.00 0.00 43.93 4.18
2050 2124 1.227002 GGTACGCAGGTAGCTGAGC 60.227 63.158 25.66 10.08 42.46 4.26
2089 2163 1.588404 CGTTGGCATGTACTCGATGTC 59.412 52.381 0.00 0.00 0.00 3.06
2218 2298 7.148188 TGCAGATAAAATAGGTTGCTTTCTCTG 60.148 37.037 0.00 0.00 32.60 3.35
2220 2300 8.610896 CAGATAAAATAGGTTGCTTTCTCTGAG 58.389 37.037 0.00 0.00 31.89 3.35
2286 2491 6.888632 AGAAATAGATTGATTTGGACTGCAGT 59.111 34.615 21.88 21.88 0.00 4.40
2293 2498 1.581934 TTTGGACTGCAGTGTCTTCG 58.418 50.000 27.27 0.00 37.16 3.79
2297 2502 1.538204 GGACTGCAGTGTCTTCGTTCA 60.538 52.381 27.27 0.00 37.16 3.18
2306 2516 5.059710 GCAGTGTCTTCGTTCATAATTTTGC 59.940 40.000 0.00 0.00 0.00 3.68
2355 2565 0.815734 GTGCTGGCTTAGTCCGAGTA 59.184 55.000 0.00 0.00 0.00 2.59
2373 2583 3.543665 AGTACACGTATCTCCAGAGTCC 58.456 50.000 0.00 0.00 0.00 3.85
2382 2592 5.707764 CGTATCTCCAGAGTCCTCATTCATA 59.292 44.000 0.00 0.00 0.00 2.15
2432 2643 7.939039 TCATGGTTCTAACATTCACTTCTTCTT 59.061 33.333 0.00 0.00 0.00 2.52
2433 2644 9.219603 CATGGTTCTAACATTCACTTCTTCTTA 57.780 33.333 0.00 0.00 0.00 2.10
2457 2671 1.066914 CTTGAGCAGCTCTGAACGAC 58.933 55.000 23.15 0.00 0.00 4.34
2534 2748 2.125350 CTCCTGCTCCTCCAACGC 60.125 66.667 0.00 0.00 0.00 4.84
2574 2788 1.610038 CTCATGTTTCAGCACCAGCAA 59.390 47.619 0.00 0.00 45.49 3.91
2613 2836 1.676746 CATTCTACCAGCTGCAGCAT 58.323 50.000 38.24 25.30 45.16 3.79
2852 3088 0.842467 AGCCCCTGCCTGTACTTTCT 60.842 55.000 0.00 0.00 38.69 2.52
2933 3169 3.073062 ACTGGTGGAGCAGTAGTTGATTT 59.927 43.478 9.71 0.00 0.00 2.17
2934 3170 4.286032 ACTGGTGGAGCAGTAGTTGATTTA 59.714 41.667 9.71 0.00 0.00 1.40
2935 3171 5.221843 ACTGGTGGAGCAGTAGTTGATTTAA 60.222 40.000 9.71 0.00 0.00 1.52
2936 3172 5.815581 TGGTGGAGCAGTAGTTGATTTAAT 58.184 37.500 0.00 0.00 0.00 1.40
2937 3173 6.245408 TGGTGGAGCAGTAGTTGATTTAATT 58.755 36.000 0.00 0.00 0.00 1.40
2967 3203 3.967332 TTCTTTTGTAGTACCCCTCCG 57.033 47.619 0.00 0.00 0.00 4.63
2971 3207 1.560505 TTGTAGTACCCCTCCGTTCC 58.439 55.000 0.00 0.00 0.00 3.62
2972 3208 0.706433 TGTAGTACCCCTCCGTTCCT 59.294 55.000 0.00 0.00 0.00 3.36
2973 3209 1.922447 TGTAGTACCCCTCCGTTCCTA 59.078 52.381 0.00 0.00 0.00 2.94
2974 3210 2.311542 TGTAGTACCCCTCCGTTCCTAA 59.688 50.000 0.00 0.00 0.00 2.69
2975 3211 2.629017 AGTACCCCTCCGTTCCTAAA 57.371 50.000 0.00 0.00 0.00 1.85
2976 3212 3.126323 AGTACCCCTCCGTTCCTAAAT 57.874 47.619 0.00 0.00 0.00 1.40
2977 3213 4.270317 AGTACCCCTCCGTTCCTAAATA 57.730 45.455 0.00 0.00 0.00 1.40
2978 3214 4.824276 AGTACCCCTCCGTTCCTAAATAT 58.176 43.478 0.00 0.00 0.00 1.28
2979 3215 5.969086 AGTACCCCTCCGTTCCTAAATATA 58.031 41.667 0.00 0.00 0.00 0.86
2980 3216 6.384603 AGTACCCCTCCGTTCCTAAATATAA 58.615 40.000 0.00 0.00 0.00 0.98
2981 3217 5.820404 ACCCCTCCGTTCCTAAATATAAG 57.180 43.478 0.00 0.00 0.00 1.73
2982 3218 4.041321 ACCCCTCCGTTCCTAAATATAAGC 59.959 45.833 0.00 0.00 0.00 3.09
2983 3219 4.286291 CCCCTCCGTTCCTAAATATAAGCT 59.714 45.833 0.00 0.00 0.00 3.74
2984 3220 5.221864 CCCCTCCGTTCCTAAATATAAGCTT 60.222 44.000 3.48 3.48 0.00 3.74
2985 3221 6.296803 CCCTCCGTTCCTAAATATAAGCTTT 58.703 40.000 3.20 0.00 0.00 3.51
2986 3222 7.447594 CCCTCCGTTCCTAAATATAAGCTTTA 58.552 38.462 3.20 0.00 0.00 1.85
2987 3223 7.603024 CCCTCCGTTCCTAAATATAAGCTTTAG 59.397 40.741 3.20 0.00 36.42 1.85
2988 3224 8.365647 CCTCCGTTCCTAAATATAAGCTTTAGA 58.634 37.037 3.20 0.00 38.07 2.10
2989 3225 9.413048 CTCCGTTCCTAAATATAAGCTTTAGAG 57.587 37.037 3.20 0.00 38.07 2.43
2990 3226 9.139734 TCCGTTCCTAAATATAAGCTTTAGAGA 57.860 33.333 3.20 0.00 38.07 3.10
2991 3227 9.930693 CCGTTCCTAAATATAAGCTTTAGAGAT 57.069 33.333 3.20 0.00 38.07 2.75
3001 3237 7.856145 ATAAGCTTTAGAGATTTCACTGTGG 57.144 36.000 3.20 0.00 32.86 4.17
3002 3238 5.489792 AGCTTTAGAGATTTCACTGTGGA 57.510 39.130 8.11 0.00 0.00 4.02
3003 3239 5.241662 AGCTTTAGAGATTTCACTGTGGAC 58.758 41.667 8.11 0.00 0.00 4.02
3004 3240 4.393371 GCTTTAGAGATTTCACTGTGGACC 59.607 45.833 8.11 0.00 0.00 4.46
3005 3241 5.551233 CTTTAGAGATTTCACTGTGGACCA 58.449 41.667 8.11 0.00 0.00 4.02
3006 3242 3.409026 AGAGATTTCACTGTGGACCAC 57.591 47.619 18.28 18.28 34.56 4.16
3007 3243 2.705658 AGAGATTTCACTGTGGACCACA 59.294 45.455 25.61 25.61 42.45 4.17
3008 3244 3.328931 AGAGATTTCACTGTGGACCACAT 59.671 43.478 27.28 11.84 43.71 3.21
3009 3245 4.532126 AGAGATTTCACTGTGGACCACATA 59.468 41.667 27.28 13.32 43.71 2.29
3010 3246 4.579869 AGATTTCACTGTGGACCACATAC 58.420 43.478 27.28 12.95 43.71 2.39
3011 3247 4.287067 AGATTTCACTGTGGACCACATACT 59.713 41.667 27.28 14.69 43.71 2.12
3012 3248 3.401033 TTCACTGTGGACCACATACTG 57.599 47.619 27.28 20.61 43.71 2.74
3013 3249 2.325484 TCACTGTGGACCACATACTGT 58.675 47.619 27.28 18.28 43.71 3.55
3014 3250 2.703536 TCACTGTGGACCACATACTGTT 59.296 45.455 27.28 5.59 43.71 3.16
3015 3251 3.135712 TCACTGTGGACCACATACTGTTT 59.864 43.478 27.28 3.90 43.71 2.83
3016 3252 3.250762 CACTGTGGACCACATACTGTTTG 59.749 47.826 27.28 15.16 43.71 2.93
3017 3253 3.118038 ACTGTGGACCACATACTGTTTGT 60.118 43.478 27.28 15.80 43.71 2.83
3018 3254 4.101898 ACTGTGGACCACATACTGTTTGTA 59.898 41.667 27.28 0.15 43.71 2.41
3019 3255 4.637276 TGTGGACCACATACTGTTTGTAG 58.363 43.478 23.72 0.00 39.62 2.74
3020 3256 4.345547 TGTGGACCACATACTGTTTGTAGA 59.654 41.667 23.72 0.00 39.62 2.59
3021 3257 5.012664 TGTGGACCACATACTGTTTGTAGAT 59.987 40.000 23.72 0.00 39.62 1.98
3022 3258 5.351465 GTGGACCACATACTGTTTGTAGATG 59.649 44.000 20.14 0.00 34.24 2.90
3023 3259 4.332819 GGACCACATACTGTTTGTAGATGC 59.667 45.833 3.58 0.00 34.24 3.91
3024 3260 4.905429 ACCACATACTGTTTGTAGATGCA 58.095 39.130 3.58 0.00 34.24 3.96
3025 3261 5.500234 ACCACATACTGTTTGTAGATGCAT 58.500 37.500 0.00 0.00 34.24 3.96
3026 3262 5.945784 ACCACATACTGTTTGTAGATGCATT 59.054 36.000 0.00 0.00 34.24 3.56
3027 3263 6.434028 ACCACATACTGTTTGTAGATGCATTT 59.566 34.615 0.00 0.00 34.24 2.32
3028 3264 6.968904 CCACATACTGTTTGTAGATGCATTTC 59.031 38.462 0.00 0.00 34.24 2.17
3029 3265 7.361971 CCACATACTGTTTGTAGATGCATTTCA 60.362 37.037 0.00 0.00 34.24 2.69
3030 3266 7.695201 CACATACTGTTTGTAGATGCATTTCAG 59.305 37.037 0.00 0.85 34.24 3.02
3031 3267 7.607607 ACATACTGTTTGTAGATGCATTTCAGA 59.392 33.333 0.00 0.00 34.24 3.27
3032 3268 6.492007 ACTGTTTGTAGATGCATTTCAGAG 57.508 37.500 0.00 1.90 0.00 3.35
3033 3269 6.000219 ACTGTTTGTAGATGCATTTCAGAGT 59.000 36.000 0.00 2.44 0.00 3.24
3034 3270 6.072838 ACTGTTTGTAGATGCATTTCAGAGTG 60.073 38.462 0.00 0.00 0.00 3.51
3035 3271 5.764686 TGTTTGTAGATGCATTTCAGAGTGT 59.235 36.000 0.00 0.00 0.00 3.55
3036 3272 6.934083 TGTTTGTAGATGCATTTCAGAGTGTA 59.066 34.615 0.00 0.00 0.00 2.90
3037 3273 7.118245 TGTTTGTAGATGCATTTCAGAGTGTAG 59.882 37.037 0.00 0.00 0.00 2.74
3038 3274 6.530019 TGTAGATGCATTTCAGAGTGTAGA 57.470 37.500 0.00 0.00 0.00 2.59
3039 3275 7.117285 TGTAGATGCATTTCAGAGTGTAGAT 57.883 36.000 0.00 0.00 0.00 1.98
3040 3276 7.559486 TGTAGATGCATTTCAGAGTGTAGATT 58.441 34.615 0.00 0.00 0.00 2.40
3041 3277 7.708322 TGTAGATGCATTTCAGAGTGTAGATTC 59.292 37.037 0.00 0.00 0.00 2.52
3042 3278 6.647229 AGATGCATTTCAGAGTGTAGATTCA 58.353 36.000 0.00 0.00 0.00 2.57
3043 3279 6.538021 AGATGCATTTCAGAGTGTAGATTCAC 59.462 38.462 0.00 0.00 38.46 3.18
3052 3288 3.931578 AGTGTAGATTCACTCACTTGGC 58.068 45.455 0.00 0.00 44.07 4.52
3053 3289 3.580458 AGTGTAGATTCACTCACTTGGCT 59.420 43.478 0.00 0.00 44.07 4.75
3054 3290 3.929610 GTGTAGATTCACTCACTTGGCTC 59.070 47.826 0.00 0.00 35.68 4.70
3055 3291 3.834813 TGTAGATTCACTCACTTGGCTCT 59.165 43.478 0.00 0.00 0.00 4.09
3056 3292 3.331478 AGATTCACTCACTTGGCTCTG 57.669 47.619 0.00 0.00 0.00 3.35
3057 3293 2.636893 AGATTCACTCACTTGGCTCTGT 59.363 45.455 0.00 0.00 0.00 3.41
3058 3294 3.834813 AGATTCACTCACTTGGCTCTGTA 59.165 43.478 0.00 0.00 0.00 2.74
3059 3295 4.469227 AGATTCACTCACTTGGCTCTGTAT 59.531 41.667 0.00 0.00 0.00 2.29
3060 3296 3.599730 TCACTCACTTGGCTCTGTATG 57.400 47.619 0.00 0.00 0.00 2.39
3061 3297 2.899900 TCACTCACTTGGCTCTGTATGT 59.100 45.455 0.00 0.00 0.00 2.29
3062 3298 4.086457 TCACTCACTTGGCTCTGTATGTA 58.914 43.478 0.00 0.00 0.00 2.29
3063 3299 4.526650 TCACTCACTTGGCTCTGTATGTAA 59.473 41.667 0.00 0.00 0.00 2.41
3064 3300 5.187772 TCACTCACTTGGCTCTGTATGTAAT 59.812 40.000 0.00 0.00 0.00 1.89
3065 3301 5.521735 CACTCACTTGGCTCTGTATGTAATC 59.478 44.000 0.00 0.00 0.00 1.75
3066 3302 5.023533 TCACTTGGCTCTGTATGTAATCC 57.976 43.478 0.00 0.00 0.00 3.01
3067 3303 4.469586 TCACTTGGCTCTGTATGTAATCCA 59.530 41.667 0.00 0.00 0.00 3.41
3068 3304 5.130975 TCACTTGGCTCTGTATGTAATCCAT 59.869 40.000 0.00 0.00 37.58 3.41
3069 3305 6.326323 TCACTTGGCTCTGTATGTAATCCATA 59.674 38.462 0.00 0.00 34.86 2.74
3070 3306 6.648310 CACTTGGCTCTGTATGTAATCCATAG 59.352 42.308 0.00 0.00 36.71 2.23
3071 3307 6.327626 ACTTGGCTCTGTATGTAATCCATAGT 59.672 38.462 0.00 0.00 36.71 2.12
3072 3308 6.101650 TGGCTCTGTATGTAATCCATAGTG 57.898 41.667 0.00 0.00 36.71 2.74
3073 3309 5.838521 TGGCTCTGTATGTAATCCATAGTGA 59.161 40.000 0.00 0.00 36.71 3.41
3074 3310 6.326323 TGGCTCTGTATGTAATCCATAGTGAA 59.674 38.462 0.00 0.00 36.71 3.18
3075 3311 7.147567 TGGCTCTGTATGTAATCCATAGTGAAA 60.148 37.037 0.00 0.00 36.71 2.69
3076 3312 7.880195 GGCTCTGTATGTAATCCATAGTGAAAT 59.120 37.037 0.00 0.00 36.71 2.17
3077 3313 8.930760 GCTCTGTATGTAATCCATAGTGAAATC 58.069 37.037 0.00 0.00 36.71 2.17
3126 3362 3.736720 GGAATATTACTCCCACCGTTCC 58.263 50.000 0.00 0.00 0.00 3.62
3127 3363 3.390311 GGAATATTACTCCCACCGTTCCT 59.610 47.826 0.00 0.00 33.00 3.36
3128 3364 4.590222 GGAATATTACTCCCACCGTTCCTA 59.410 45.833 0.00 0.00 33.00 2.94
3129 3365 5.070847 GGAATATTACTCCCACCGTTCCTAA 59.929 44.000 0.00 0.00 33.00 2.69
3130 3366 6.408434 GGAATATTACTCCCACCGTTCCTAAA 60.408 42.308 0.00 0.00 33.00 1.85
3131 3367 6.758806 ATATTACTCCCACCGTTCCTAAAT 57.241 37.500 0.00 0.00 0.00 1.40
3132 3368 7.860649 ATATTACTCCCACCGTTCCTAAATA 57.139 36.000 0.00 0.00 0.00 1.40
3133 3369 6.758806 ATTACTCCCACCGTTCCTAAATAT 57.241 37.500 0.00 0.00 0.00 1.28
3134 3370 6.564557 TTACTCCCACCGTTCCTAAATATT 57.435 37.500 0.00 0.00 0.00 1.28
3135 3371 5.446260 ACTCCCACCGTTCCTAAATATTT 57.554 39.130 5.89 5.89 0.00 1.40
3136 3372 5.190677 ACTCCCACCGTTCCTAAATATTTG 58.809 41.667 11.05 1.40 0.00 2.32
3137 3373 5.182169 TCCCACCGTTCCTAAATATTTGT 57.818 39.130 11.05 0.00 0.00 2.83
3138 3374 5.187687 TCCCACCGTTCCTAAATATTTGTC 58.812 41.667 11.05 0.00 0.00 3.18
3139 3375 5.045432 TCCCACCGTTCCTAAATATTTGTCT 60.045 40.000 11.05 0.00 0.00 3.41
3140 3376 5.650703 CCCACCGTTCCTAAATATTTGTCTT 59.349 40.000 11.05 0.00 0.00 3.01
3141 3377 6.152154 CCCACCGTTCCTAAATATTTGTCTTT 59.848 38.462 11.05 0.00 0.00 2.52
3142 3378 7.248437 CCACCGTTCCTAAATATTTGTCTTTC 58.752 38.462 11.05 0.00 0.00 2.62
3143 3379 7.120726 CCACCGTTCCTAAATATTTGTCTTTCT 59.879 37.037 11.05 0.00 0.00 2.52
3144 3380 9.158233 CACCGTTCCTAAATATTTGTCTTTCTA 57.842 33.333 11.05 0.00 0.00 2.10
3145 3381 9.379791 ACCGTTCCTAAATATTTGTCTTTCTAG 57.620 33.333 11.05 0.00 0.00 2.43
3146 3382 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3157 3393 8.833231 ATTTGTCTTTCTAGAGATTTCGACAA 57.167 30.769 10.14 10.14 38.08 3.18
3158 3394 7.875316 TTGTCTTTCTAGAGATTTCGACAAG 57.125 36.000 10.14 1.62 35.84 3.16
3159 3395 6.982852 TGTCTTTCTAGAGATTTCGACAAGT 58.017 36.000 0.00 0.00 0.00 3.16
3160 3396 6.863645 TGTCTTTCTAGAGATTTCGACAAGTG 59.136 38.462 0.00 0.00 0.00 3.16
3161 3397 6.309251 GTCTTTCTAGAGATTTCGACAAGTGG 59.691 42.308 0.00 0.00 0.00 4.00
3162 3398 4.111375 TCTAGAGATTTCGACAAGTGGC 57.889 45.455 0.00 0.00 0.00 5.01
3163 3399 3.764434 TCTAGAGATTTCGACAAGTGGCT 59.236 43.478 0.00 0.00 0.00 4.75
3164 3400 4.948004 TCTAGAGATTTCGACAAGTGGCTA 59.052 41.667 0.00 0.00 0.00 3.93
3165 3401 3.851098 AGAGATTTCGACAAGTGGCTAC 58.149 45.455 0.00 0.00 0.00 3.58
3166 3402 3.258372 AGAGATTTCGACAAGTGGCTACA 59.742 43.478 2.02 0.00 0.00 2.74
3167 3403 4.081420 AGAGATTTCGACAAGTGGCTACAT 60.081 41.667 2.02 0.00 0.00 2.29
3168 3404 5.127194 AGAGATTTCGACAAGTGGCTACATA 59.873 40.000 2.02 0.00 0.00 2.29
3169 3405 5.109903 AGATTTCGACAAGTGGCTACATAC 58.890 41.667 2.02 0.00 0.00 2.39
3170 3406 2.554806 TCGACAAGTGGCTACATACG 57.445 50.000 2.02 3.07 0.00 3.06
3171 3407 1.133598 TCGACAAGTGGCTACATACGG 59.866 52.381 2.02 0.00 0.00 4.02
3172 3408 1.133598 CGACAAGTGGCTACATACGGA 59.866 52.381 2.02 0.00 0.00 4.69
3173 3409 2.794981 CGACAAGTGGCTACATACGGAG 60.795 54.545 2.02 0.00 0.00 4.63
3174 3410 1.134788 ACAAGTGGCTACATACGGAGC 60.135 52.381 2.02 0.00 38.00 4.70
3175 3411 1.134818 CAAGTGGCTACATACGGAGCA 60.135 52.381 2.02 0.00 40.64 4.26
3176 3412 1.191535 AGTGGCTACATACGGAGCAA 58.808 50.000 2.02 0.00 40.64 3.91
3177 3413 1.553248 AGTGGCTACATACGGAGCAAA 59.447 47.619 2.02 0.00 40.64 3.68
3178 3414 2.027561 AGTGGCTACATACGGAGCAAAA 60.028 45.455 2.02 0.00 40.64 2.44
3179 3415 2.943033 GTGGCTACATACGGAGCAAAAT 59.057 45.455 0.00 0.00 40.64 1.82
3180 3416 2.942376 TGGCTACATACGGAGCAAAATG 59.058 45.455 0.00 0.00 40.64 2.32
3181 3417 3.202906 GGCTACATACGGAGCAAAATGA 58.797 45.455 0.00 0.00 40.64 2.57
3182 3418 3.248602 GGCTACATACGGAGCAAAATGAG 59.751 47.826 0.00 0.00 40.64 2.90
3183 3419 3.871594 GCTACATACGGAGCAAAATGAGT 59.128 43.478 0.00 0.00 38.62 3.41
3184 3420 4.260375 GCTACATACGGAGCAAAATGAGTG 60.260 45.833 0.00 0.00 38.62 3.51
3185 3421 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3186 3422 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3187 3423 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3188 3424 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3189 3425 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3190 3426 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3191 3427 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3192 3428 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3193 3429 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3229 3465 9.511272 TGTCTATATACATTCGTATGTGGTAGT 57.489 33.333 16.91 2.71 44.56 2.73
3230 3466 9.985318 GTCTATATACATTCGTATGTGGTAGTC 57.015 37.037 16.91 9.92 44.56 2.59
3231 3467 9.170734 TCTATATACATTCGTATGTGGTAGTCC 57.829 37.037 16.91 0.00 44.56 3.85
3232 3468 7.770366 ATATACATTCGTATGTGGTAGTCCA 57.230 36.000 16.91 0.00 44.56 4.02
3233 3469 6.665992 ATACATTCGTATGTGGTAGTCCAT 57.334 37.500 16.91 0.00 44.56 3.41
3234 3470 5.353394 ACATTCGTATGTGGTAGTCCATT 57.647 39.130 6.89 0.00 46.20 3.16
3235 3471 5.741011 ACATTCGTATGTGGTAGTCCATTT 58.259 37.500 6.89 0.00 46.20 2.32
3236 3472 5.584649 ACATTCGTATGTGGTAGTCCATTTG 59.415 40.000 6.89 0.00 46.20 2.32
3237 3473 5.408880 TTCGTATGTGGTAGTCCATTTGA 57.591 39.130 0.00 0.00 46.20 2.69
3238 3474 5.408880 TCGTATGTGGTAGTCCATTTGAA 57.591 39.130 0.00 0.00 46.20 2.69
3239 3475 5.795972 TCGTATGTGGTAGTCCATTTGAAA 58.204 37.500 0.00 0.00 46.20 2.69
3240 3476 6.231951 TCGTATGTGGTAGTCCATTTGAAAA 58.768 36.000 0.00 0.00 46.20 2.29
3241 3477 6.882140 TCGTATGTGGTAGTCCATTTGAAAAT 59.118 34.615 0.00 0.00 46.20 1.82
3242 3478 8.041919 TCGTATGTGGTAGTCCATTTGAAAATA 58.958 33.333 0.00 0.00 46.20 1.40
3243 3479 8.836413 CGTATGTGGTAGTCCATTTGAAAATAT 58.164 33.333 0.00 0.00 46.20 1.28
3279 3515 8.625467 AAATATTTAGGAACAGAGGGAGTAGT 57.375 34.615 0.00 0.00 0.00 2.73
3280 3516 8.625467 AATATTTAGGAACAGAGGGAGTAGTT 57.375 34.615 0.00 0.00 0.00 2.24
3281 3517 6.954352 ATTTAGGAACAGAGGGAGTAGTTT 57.046 37.500 0.00 0.00 0.00 2.66
3282 3518 5.997384 TTAGGAACAGAGGGAGTAGTTTC 57.003 43.478 0.00 0.00 0.00 2.78
3286 3522 6.265304 AGGAACAGAGGGAGTAGTTTCTATT 58.735 40.000 0.00 0.00 28.33 1.73
3296 3532 6.596888 GGGAGTAGTTTCTATTTGTTGGGTAC 59.403 42.308 0.00 0.00 0.00 3.34
3404 3643 8.915654 GCCAAAACATCTTACATTTAGAAACAG 58.084 33.333 0.00 0.00 0.00 3.16
3409 3648 7.101054 ACATCTTACATTTAGAAACAGCGGTA 58.899 34.615 0.00 0.00 0.00 4.02
3426 3665 6.877322 ACAGCGGTAGTACAAAATAAGAATGT 59.123 34.615 2.06 0.00 0.00 2.71
3427 3666 8.036575 ACAGCGGTAGTACAAAATAAGAATGTA 58.963 33.333 2.06 0.00 0.00 2.29
3461 3715 0.108756 GTGGCTAGACAAGGTCCGTC 60.109 60.000 0.00 0.00 32.18 4.79
3467 3721 2.821991 AGACAAGGTCCGTCTTCTTG 57.178 50.000 0.00 0.00 40.89 3.02
3478 3732 5.287992 GGTCCGTCTTCTTGTAACTAAATCG 59.712 44.000 0.00 0.00 0.00 3.34
3495 3749 1.173444 TCGAATCTCGCCTAGGCCTC 61.173 60.000 28.09 14.75 40.21 4.70
3497 3751 1.882780 CGAATCTCGCCTAGGCCTCTA 60.883 57.143 28.09 11.48 37.98 2.43
3506 3760 3.491104 CGCCTAGGCCTCTAGTACTTTTG 60.491 52.174 28.09 4.63 40.98 2.44
3507 3761 3.181464 GCCTAGGCCTCTAGTACTTTTGG 60.181 52.174 24.19 1.93 40.98 3.28
3511 3765 4.426704 AGGCCTCTAGTACTTTTGGAAGA 58.573 43.478 0.00 0.00 36.69 2.87
3544 3798 5.820131 TCCGTGCATGAATCAAAATCATAC 58.180 37.500 7.72 0.00 35.80 2.39
3545 3799 5.589855 TCCGTGCATGAATCAAAATCATACT 59.410 36.000 7.72 0.00 35.80 2.12
3546 3800 5.911280 CCGTGCATGAATCAAAATCATACTC 59.089 40.000 7.72 0.00 35.80 2.59
3547 3801 5.911280 CGTGCATGAATCAAAATCATACTCC 59.089 40.000 0.00 0.00 35.80 3.85
3549 3803 6.040166 GTGCATGAATCAAAATCATACTCCCT 59.960 38.462 0.00 0.00 35.80 4.20
3550 3804 6.263842 TGCATGAATCAAAATCATACTCCCTC 59.736 38.462 0.00 0.00 35.80 4.30
3551 3805 6.294397 GCATGAATCAAAATCATACTCCCTCC 60.294 42.308 0.00 0.00 35.80 4.30
3552 3806 5.368145 TGAATCAAAATCATACTCCCTCCG 58.632 41.667 0.00 0.00 0.00 4.63
3553 3807 5.104527 TGAATCAAAATCATACTCCCTCCGT 60.105 40.000 0.00 0.00 0.00 4.69
3554 3808 4.837093 TCAAAATCATACTCCCTCCGTT 57.163 40.909 0.00 0.00 0.00 4.44
3555 3809 4.766375 TCAAAATCATACTCCCTCCGTTC 58.234 43.478 0.00 0.00 0.00 3.95
3556 3810 3.840124 AAATCATACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
3557 3811 2.777459 ATCATACTCCCTCCGTTCCT 57.223 50.000 0.00 0.00 0.00 3.36
3558 3812 3.897657 ATCATACTCCCTCCGTTCCTA 57.102 47.619 0.00 0.00 0.00 2.94
3559 3813 3.675348 TCATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
3560 3814 3.985127 TCATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
3561 3815 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
3562 3816 5.708544 TCATACTCCCTCCGTTCCTAAATA 58.291 41.667 0.00 0.00 0.00 1.40
3563 3817 5.537674 TCATACTCCCTCCGTTCCTAAATAC 59.462 44.000 0.00 0.00 0.00 1.89
3564 3818 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
3565 3819 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
3566 3820 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
3567 3821 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
3568 3822 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
3569 3823 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
3570 3824 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
3571 3825 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
3572 3826 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
3573 3827 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
3574 3828 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
3575 3829 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
3576 3830 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
3577 3831 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
3578 3832 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
3579 3833 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
3580 3834 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
3581 3835 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
3583 3837 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
3584 3838 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
3585 3839 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
3586 3840 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
3587 3841 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
3588 3842 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
3589 3843 5.827797 TGTCTTTCTAGGCATTTCAACAAGT 59.172 36.000 0.00 0.00 29.10 3.16
3590 3844 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
3591 3845 6.017109 GTCTTTCTAGGCATTTCAACAAGTGA 60.017 38.462 0.00 0.00 0.00 3.41
3592 3846 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
3593 3847 4.973168 TCTAGGCATTTCAACAAGTGACT 58.027 39.130 0.00 0.00 40.60 3.41
3594 3848 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
3595 3849 5.932303 TCTAGGCATTTCAACAAGTGACTAC 59.068 40.000 0.00 0.00 38.51 2.73
3596 3850 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
3597 3851 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
3598 3852 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
3599 3853 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
3600 3854 6.015504 GCATTTCAACAAGTGACTACATACG 58.984 40.000 0.00 0.00 35.39 3.06
3601 3855 6.534059 CATTTCAACAAGTGACTACATACGG 58.466 40.000 0.00 0.00 35.39 4.02
3602 3856 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3603 3857 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3604 3858 5.010314 TTCAACAAGTGACTACATACGGAGT 59.990 40.000 0.00 0.00 39.84 3.85
3605 3859 6.207221 TTCAACAAGTGACTACATACGGAGTA 59.793 38.462 0.00 0.00 41.66 2.59
3606 3860 7.255555 TTCAACAAGTGACTACATACGGAGTAA 60.256 37.037 0.00 0.00 41.03 2.24
3622 3876 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
3623 3877 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.978925 TCTTTTCTAATCTAATCATCTCCCCC 58.021 38.462 0.00 0.00 0.00 5.40
6 7 9.853177 TTTCTTTTCTAATCTAATCATCTCCCC 57.147 33.333 0.00 0.00 0.00 4.81
21 22 9.869757 CTGTTCTTTTCCCTTTTTCTTTTCTAA 57.130 29.630 0.00 0.00 0.00 2.10
22 23 7.979537 GCTGTTCTTTTCCCTTTTTCTTTTCTA 59.020 33.333 0.00 0.00 0.00 2.10
23 24 6.818644 GCTGTTCTTTTCCCTTTTTCTTTTCT 59.181 34.615 0.00 0.00 0.00 2.52
24 25 6.037172 GGCTGTTCTTTTCCCTTTTTCTTTTC 59.963 38.462 0.00 0.00 0.00 2.29
25 26 5.880332 GGCTGTTCTTTTCCCTTTTTCTTTT 59.120 36.000 0.00 0.00 0.00 2.27
26 27 5.428253 GGCTGTTCTTTTCCCTTTTTCTTT 58.572 37.500 0.00 0.00 0.00 2.52
27 28 4.441495 CGGCTGTTCTTTTCCCTTTTTCTT 60.441 41.667 0.00 0.00 0.00 2.52
28 29 3.068165 CGGCTGTTCTTTTCCCTTTTTCT 59.932 43.478 0.00 0.00 0.00 2.52
29 30 3.181479 ACGGCTGTTCTTTTCCCTTTTTC 60.181 43.478 0.00 0.00 0.00 2.29
30 31 2.764010 ACGGCTGTTCTTTTCCCTTTTT 59.236 40.909 0.00 0.00 0.00 1.94
31 32 2.384828 ACGGCTGTTCTTTTCCCTTTT 58.615 42.857 0.00 0.00 0.00 2.27
32 33 2.067365 ACGGCTGTTCTTTTCCCTTT 57.933 45.000 0.00 0.00 0.00 3.11
33 34 2.552373 CCTACGGCTGTTCTTTTCCCTT 60.552 50.000 1.99 0.00 0.00 3.95
34 35 1.003233 CCTACGGCTGTTCTTTTCCCT 59.997 52.381 1.99 0.00 0.00 4.20
35 36 1.002773 TCCTACGGCTGTTCTTTTCCC 59.997 52.381 1.99 0.00 0.00 3.97
36 37 2.467566 TCCTACGGCTGTTCTTTTCC 57.532 50.000 1.99 0.00 0.00 3.13
37 38 3.596214 TCATCCTACGGCTGTTCTTTTC 58.404 45.455 1.99 0.00 0.00 2.29
38 39 3.695830 TCATCCTACGGCTGTTCTTTT 57.304 42.857 1.99 0.00 0.00 2.27
39 40 3.008049 ACTTCATCCTACGGCTGTTCTTT 59.992 43.478 1.99 0.00 0.00 2.52
40 41 2.567615 ACTTCATCCTACGGCTGTTCTT 59.432 45.455 1.99 0.00 0.00 2.52
41 42 2.093973 CACTTCATCCTACGGCTGTTCT 60.094 50.000 1.99 0.00 0.00 3.01
42 43 2.271800 CACTTCATCCTACGGCTGTTC 58.728 52.381 1.99 0.00 0.00 3.18
43 44 1.066143 CCACTTCATCCTACGGCTGTT 60.066 52.381 1.99 0.00 0.00 3.16
44 45 0.537188 CCACTTCATCCTACGGCTGT 59.463 55.000 2.42 2.42 0.00 4.40
45 46 0.179073 CCCACTTCATCCTACGGCTG 60.179 60.000 0.00 0.00 0.00 4.85
46 47 0.325296 TCCCACTTCATCCTACGGCT 60.325 55.000 0.00 0.00 0.00 5.52
47 48 0.105039 CTCCCACTTCATCCTACGGC 59.895 60.000 0.00 0.00 0.00 5.68
48 49 0.105039 GCTCCCACTTCATCCTACGG 59.895 60.000 0.00 0.00 0.00 4.02
49 50 0.824109 TGCTCCCACTTCATCCTACG 59.176 55.000 0.00 0.00 0.00 3.51
50 51 1.471676 CGTGCTCCCACTTCATCCTAC 60.472 57.143 0.00 0.00 39.86 3.18
51 52 0.824109 CGTGCTCCCACTTCATCCTA 59.176 55.000 0.00 0.00 39.86 2.94
52 53 1.599047 CGTGCTCCCACTTCATCCT 59.401 57.895 0.00 0.00 39.86 3.24
53 54 1.450312 CCGTGCTCCCACTTCATCC 60.450 63.158 0.00 0.00 39.86 3.51
54 55 0.179000 ATCCGTGCTCCCACTTCATC 59.821 55.000 0.00 0.00 39.86 2.92
55 56 0.107508 CATCCGTGCTCCCACTTCAT 60.108 55.000 0.00 0.00 39.86 2.57
56 57 1.296392 CATCCGTGCTCCCACTTCA 59.704 57.895 0.00 0.00 39.86 3.02
57 58 1.450312 CCATCCGTGCTCCCACTTC 60.450 63.158 0.00 0.00 39.86 3.01
58 59 2.671070 CCATCCGTGCTCCCACTT 59.329 61.111 0.00 0.00 39.86 3.16
59 60 3.402681 CCCATCCGTGCTCCCACT 61.403 66.667 0.00 0.00 39.86 4.00
60 61 3.391665 CTCCCATCCGTGCTCCCAC 62.392 68.421 0.00 0.00 38.62 4.61
61 62 3.083349 CTCCCATCCGTGCTCCCA 61.083 66.667 0.00 0.00 0.00 4.37
62 63 4.554036 GCTCCCATCCGTGCTCCC 62.554 72.222 0.00 0.00 0.00 4.30
63 64 3.112205 ATGCTCCCATCCGTGCTCC 62.112 63.158 0.00 0.00 0.00 4.70
64 65 1.890979 CATGCTCCCATCCGTGCTC 60.891 63.158 0.00 0.00 0.00 4.26
65 66 2.191375 CATGCTCCCATCCGTGCT 59.809 61.111 0.00 0.00 0.00 4.40
66 67 2.903855 CCATGCTCCCATCCGTGC 60.904 66.667 0.00 0.00 0.00 5.34
67 68 1.227764 CTCCATGCTCCCATCCGTG 60.228 63.158 0.00 0.00 0.00 4.94
68 69 1.383109 TCTCCATGCTCCCATCCGT 60.383 57.895 0.00 0.00 0.00 4.69
69 70 1.370437 CTCTCCATGCTCCCATCCG 59.630 63.158 0.00 0.00 0.00 4.18
70 71 1.759881 CCTCTCCATGCTCCCATCC 59.240 63.158 0.00 0.00 0.00 3.51
71 72 0.765903 TCCCTCTCCATGCTCCCATC 60.766 60.000 0.00 0.00 0.00 3.51
72 73 0.767446 CTCCCTCTCCATGCTCCCAT 60.767 60.000 0.00 0.00 0.00 4.00
73 74 1.383664 CTCCCTCTCCATGCTCCCA 60.384 63.158 0.00 0.00 0.00 4.37
74 75 2.817056 GCTCCCTCTCCATGCTCCC 61.817 68.421 0.00 0.00 0.00 4.30
75 76 2.042404 CTGCTCCCTCTCCATGCTCC 62.042 65.000 0.00 0.00 0.00 4.70
76 77 1.446791 CTGCTCCCTCTCCATGCTC 59.553 63.158 0.00 0.00 0.00 4.26
77 78 2.071262 CCTGCTCCCTCTCCATGCT 61.071 63.158 0.00 0.00 0.00 3.79
78 79 2.509916 CCTGCTCCCTCTCCATGC 59.490 66.667 0.00 0.00 0.00 4.06
79 80 1.918467 TTGCCTGCTCCCTCTCCATG 61.918 60.000 0.00 0.00 0.00 3.66
80 81 1.617536 TTGCCTGCTCCCTCTCCAT 60.618 57.895 0.00 0.00 0.00 3.41
81 82 2.203983 TTGCCTGCTCCCTCTCCA 60.204 61.111 0.00 0.00 0.00 3.86
82 83 2.588989 CTTGCCTGCTCCCTCTCC 59.411 66.667 0.00 0.00 0.00 3.71
83 84 2.124778 GCTTGCCTGCTCCCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
84 85 3.726144 GGCTTGCCTGCTCCCTCT 61.726 66.667 4.11 0.00 0.00 3.69
88 89 2.608970 TAATCCGGCTTGCCTGCTCC 62.609 60.000 10.12 0.00 0.00 4.70
89 90 1.153168 TAATCCGGCTTGCCTGCTC 60.153 57.895 10.12 0.00 0.00 4.26
90 91 1.452108 GTAATCCGGCTTGCCTGCT 60.452 57.895 10.12 0.00 0.00 4.24
91 92 1.103398 ATGTAATCCGGCTTGCCTGC 61.103 55.000 10.12 0.00 0.00 4.85
92 93 2.146342 CTATGTAATCCGGCTTGCCTG 58.854 52.381 10.12 3.29 0.00 4.85
93 94 1.072331 CCTATGTAATCCGGCTTGCCT 59.928 52.381 10.12 0.00 0.00 4.75
94 95 1.202770 ACCTATGTAATCCGGCTTGCC 60.203 52.381 0.00 0.75 0.00 4.52
95 96 1.873591 CACCTATGTAATCCGGCTTGC 59.126 52.381 0.00 0.00 0.00 4.01
96 97 1.873591 GCACCTATGTAATCCGGCTTG 59.126 52.381 0.00 0.00 0.00 4.01
97 98 1.768870 AGCACCTATGTAATCCGGCTT 59.231 47.619 0.00 0.00 0.00 4.35
98 99 1.070758 CAGCACCTATGTAATCCGGCT 59.929 52.381 0.00 0.00 0.00 5.52
99 100 1.512926 CAGCACCTATGTAATCCGGC 58.487 55.000 0.00 0.00 0.00 6.13
100 101 1.691976 TCCAGCACCTATGTAATCCGG 59.308 52.381 0.00 0.00 0.00 5.14
101 102 3.006859 TGATCCAGCACCTATGTAATCCG 59.993 47.826 0.00 0.00 0.00 4.18
102 103 4.319177 GTGATCCAGCACCTATGTAATCC 58.681 47.826 0.00 0.00 32.68 3.01
103 104 3.990469 CGTGATCCAGCACCTATGTAATC 59.010 47.826 0.00 0.00 35.37 1.75
104 105 3.641436 TCGTGATCCAGCACCTATGTAAT 59.359 43.478 0.00 0.00 35.37 1.89
105 106 3.028130 TCGTGATCCAGCACCTATGTAA 58.972 45.455 0.00 0.00 35.37 2.41
106 107 2.623416 CTCGTGATCCAGCACCTATGTA 59.377 50.000 0.00 0.00 35.37 2.29
165 166 4.445545 GCGGCAGCGGAAACTTCG 62.446 66.667 3.69 0.00 0.00 3.79
343 344 4.572571 TCCGGCCCGTTTGCTTGT 62.573 61.111 0.85 0.00 0.00 3.16
367 368 2.202557 TGCGCGTGTTCGATCGAT 60.203 55.556 20.18 0.00 39.71 3.59
368 369 3.169924 GTGCGCGTGTTCGATCGA 61.170 61.111 15.15 15.15 39.71 3.59
512 524 1.448893 GCGGAAATGGGTCGTGCTA 60.449 57.895 0.00 0.00 0.00 3.49
571 588 3.685214 CTACCTGCTCGTTCGCGCT 62.685 63.158 5.56 0.00 41.05 5.92
578 595 1.104630 GCTTACCTCTACCTGCTCGT 58.895 55.000 0.00 0.00 0.00 4.18
581 598 1.765314 CCATGCTTACCTCTACCTGCT 59.235 52.381 0.00 0.00 0.00 4.24
589 606 0.533755 ATGCGCTCCATGCTTACCTC 60.534 55.000 9.73 0.00 40.11 3.85
590 607 0.107017 AATGCGCTCCATGCTTACCT 60.107 50.000 9.73 0.00 40.11 3.08
591 608 0.029834 CAATGCGCTCCATGCTTACC 59.970 55.000 9.73 0.00 40.11 2.85
592 609 0.029834 CCAATGCGCTCCATGCTTAC 59.970 55.000 9.73 0.00 40.11 2.34
593 610 1.727511 GCCAATGCGCTCCATGCTTA 61.728 55.000 9.73 0.00 40.11 3.09
594 611 3.072486 GCCAATGCGCTCCATGCTT 62.072 57.895 9.73 0.00 40.11 3.91
1180 1206 3.479269 GGACGCGAAGTTGAGCCG 61.479 66.667 15.93 0.00 0.00 5.52
1381 1414 1.063806 GGATTCGCGATCTTGATCGG 58.936 55.000 27.17 19.23 43.66 4.18
1455 1488 5.541868 ACTCGATCTCAGTTCCATAATCCAT 59.458 40.000 0.00 0.00 0.00 3.41
1634 1671 1.788229 GAGAGGAGGAGGAAGGAAGG 58.212 60.000 0.00 0.00 0.00 3.46
1639 1676 0.257616 AGGTCGAGAGGAGGAGGAAG 59.742 60.000 0.00 0.00 0.00 3.46
1640 1677 0.256464 GAGGTCGAGAGGAGGAGGAA 59.744 60.000 0.00 0.00 0.00 3.36
1641 1678 1.916738 GAGGTCGAGAGGAGGAGGA 59.083 63.158 0.00 0.00 0.00 3.71
1642 1679 1.525077 CGAGGTCGAGAGGAGGAGG 60.525 68.421 0.00 0.00 43.02 4.30
1643 1680 1.092921 CACGAGGTCGAGAGGAGGAG 61.093 65.000 6.35 0.00 43.02 3.69
1873 1935 0.399806 TCGGTGGATGGATGGATGGA 60.400 55.000 0.00 0.00 0.00 3.41
1875 1937 1.817357 CATCGGTGGATGGATGGATG 58.183 55.000 0.00 0.00 45.15 3.51
1941 2015 2.432628 GTCAACGTCAGGAGCCGG 60.433 66.667 0.00 0.00 0.00 6.13
2009 2083 1.221840 GAGGGAATTCAGAGCCGCA 59.778 57.895 7.93 0.00 0.00 5.69
2012 2086 1.069358 CTACCGAGGGAATTCAGAGCC 59.931 57.143 7.93 0.00 0.00 4.70
2089 2163 3.314553 CTGGCGTAATGGATTAGTACCG 58.685 50.000 0.00 0.00 0.00 4.02
2189 2269 6.442513 AAGCAACCTATTTTATCTGCAGAC 57.557 37.500 20.97 0.84 32.21 3.51
2218 2298 1.028868 GGCAACTCCACAGCATCCTC 61.029 60.000 0.00 0.00 34.01 3.71
2220 2300 1.303561 TGGCAACTCCACAGCATCC 60.304 57.895 0.00 0.00 40.72 3.51
2282 2487 5.059710 GCAAAATTATGAACGAAGACACTGC 59.940 40.000 0.00 0.00 0.00 4.40
2286 2491 6.636447 CACTTGCAAAATTATGAACGAAGACA 59.364 34.615 0.00 0.00 0.00 3.41
2297 2502 8.760569 CGGTTAAAGAAACACTTGCAAAATTAT 58.239 29.630 0.00 0.00 40.08 1.28
2306 2516 3.541711 CGAGCGGTTAAAGAAACACTTG 58.458 45.455 0.00 0.00 40.08 3.16
2355 2565 2.026169 TGAGGACTCTGGAGATACGTGT 60.026 50.000 0.00 0.00 0.00 4.49
2373 2583 9.199982 AGAAACACTTGCAAAATTATGAATGAG 57.800 29.630 0.00 0.00 0.00 2.90
2382 2592 9.213799 TGAGTTTAAAGAAACACTTGCAAAATT 57.786 25.926 0.00 0.00 46.30 1.82
2432 2643 4.248859 GTTCAGAGCTGCTCAAGAACATA 58.751 43.478 36.21 19.10 42.12 2.29
2433 2644 3.072944 GTTCAGAGCTGCTCAAGAACAT 58.927 45.455 36.21 17.10 42.12 2.71
2574 2788 0.541863 GTATGGGTGTAGCCTGCAGT 59.458 55.000 13.81 0.00 37.43 4.40
2613 2836 0.464193 TCTGCTGCTGCTGTTGTTGA 60.464 50.000 17.00 0.00 40.48 3.18
2943 3179 6.840705 ACGGAGGGGTACTACAAAAGAATATA 59.159 38.462 0.00 0.00 0.00 0.86
2961 3197 5.485209 AGCTTATATTTAGGAACGGAGGG 57.515 43.478 0.00 0.00 0.00 4.30
2962 3198 8.365647 TCTAAAGCTTATATTTAGGAACGGAGG 58.634 37.037 0.00 0.00 39.59 4.30
2963 3199 9.413048 CTCTAAAGCTTATATTTAGGAACGGAG 57.587 37.037 0.00 0.00 39.59 4.63
2965 3201 9.930693 ATCTCTAAAGCTTATATTTAGGAACGG 57.069 33.333 0.00 0.00 39.59 4.44
2975 3211 9.553064 CCACAGTGAAATCTCTAAAGCTTATAT 57.447 33.333 0.00 0.00 0.00 0.86
2976 3212 8.758829 TCCACAGTGAAATCTCTAAAGCTTATA 58.241 33.333 0.00 0.00 0.00 0.98
2977 3213 7.550906 GTCCACAGTGAAATCTCTAAAGCTTAT 59.449 37.037 0.00 0.00 0.00 1.73
2978 3214 6.874134 GTCCACAGTGAAATCTCTAAAGCTTA 59.126 38.462 0.00 0.00 0.00 3.09
2979 3215 5.703130 GTCCACAGTGAAATCTCTAAAGCTT 59.297 40.000 0.62 0.00 0.00 3.74
2980 3216 5.241662 GTCCACAGTGAAATCTCTAAAGCT 58.758 41.667 0.62 0.00 0.00 3.74
2981 3217 4.393371 GGTCCACAGTGAAATCTCTAAAGC 59.607 45.833 0.62 0.00 0.00 3.51
2982 3218 5.409826 GTGGTCCACAGTGAAATCTCTAAAG 59.590 44.000 17.59 0.00 34.08 1.85
2983 3219 5.163248 TGTGGTCCACAGTGAAATCTCTAAA 60.163 40.000 21.21 0.00 39.62 1.85
2984 3220 4.346709 TGTGGTCCACAGTGAAATCTCTAA 59.653 41.667 21.21 0.00 39.62 2.10
2985 3221 3.901222 TGTGGTCCACAGTGAAATCTCTA 59.099 43.478 21.21 0.00 39.62 2.43
2986 3222 2.705658 TGTGGTCCACAGTGAAATCTCT 59.294 45.455 21.21 0.00 39.62 3.10
2987 3223 3.126001 TGTGGTCCACAGTGAAATCTC 57.874 47.619 21.21 0.00 39.62 2.75
3006 3242 7.977904 TCTGAAATGCATCTACAAACAGTATG 58.022 34.615 0.00 0.00 46.00 2.39
3007 3243 7.826252 ACTCTGAAATGCATCTACAAACAGTAT 59.174 33.333 0.00 0.00 30.93 2.12
3008 3244 7.118245 CACTCTGAAATGCATCTACAAACAGTA 59.882 37.037 0.00 0.00 0.00 2.74
3009 3245 6.000219 ACTCTGAAATGCATCTACAAACAGT 59.000 36.000 0.00 1.25 0.00 3.55
3010 3246 6.072838 ACACTCTGAAATGCATCTACAAACAG 60.073 38.462 0.00 2.92 0.00 3.16
3011 3247 5.764686 ACACTCTGAAATGCATCTACAAACA 59.235 36.000 0.00 0.00 0.00 2.83
3012 3248 6.246420 ACACTCTGAAATGCATCTACAAAC 57.754 37.500 0.00 0.00 0.00 2.93
3013 3249 7.386059 TCTACACTCTGAAATGCATCTACAAA 58.614 34.615 0.00 0.00 0.00 2.83
3014 3250 6.935167 TCTACACTCTGAAATGCATCTACAA 58.065 36.000 0.00 0.00 0.00 2.41
3015 3251 6.530019 TCTACACTCTGAAATGCATCTACA 57.470 37.500 0.00 0.00 0.00 2.74
3016 3252 7.708322 TGAATCTACACTCTGAAATGCATCTAC 59.292 37.037 0.00 0.00 0.00 2.59
3017 3253 7.708322 GTGAATCTACACTCTGAAATGCATCTA 59.292 37.037 0.00 0.00 37.73 1.98
3018 3254 6.538021 GTGAATCTACACTCTGAAATGCATCT 59.462 38.462 0.00 0.00 37.73 2.90
3019 3255 6.538021 AGTGAATCTACACTCTGAAATGCATC 59.462 38.462 0.00 0.00 46.36 3.91
3020 3256 6.413052 AGTGAATCTACACTCTGAAATGCAT 58.587 36.000 0.00 0.00 46.36 3.96
3021 3257 5.798132 AGTGAATCTACACTCTGAAATGCA 58.202 37.500 0.00 0.00 46.36 3.96
3032 3268 3.929610 GAGCCAAGTGAGTGAATCTACAC 59.070 47.826 0.00 0.00 40.60 2.90
3033 3269 3.834813 AGAGCCAAGTGAGTGAATCTACA 59.165 43.478 0.00 0.00 0.00 2.74
3034 3270 4.180057 CAGAGCCAAGTGAGTGAATCTAC 58.820 47.826 0.00 0.00 0.00 2.59
3035 3271 3.834813 ACAGAGCCAAGTGAGTGAATCTA 59.165 43.478 0.00 0.00 0.00 1.98
3036 3272 2.636893 ACAGAGCCAAGTGAGTGAATCT 59.363 45.455 0.00 0.00 0.00 2.40
3037 3273 3.051081 ACAGAGCCAAGTGAGTGAATC 57.949 47.619 0.00 0.00 0.00 2.52
3038 3274 4.019860 ACATACAGAGCCAAGTGAGTGAAT 60.020 41.667 0.00 0.00 0.00 2.57
3039 3275 3.324846 ACATACAGAGCCAAGTGAGTGAA 59.675 43.478 0.00 0.00 0.00 3.18
3040 3276 2.899900 ACATACAGAGCCAAGTGAGTGA 59.100 45.455 0.00 0.00 0.00 3.41
3041 3277 3.325293 ACATACAGAGCCAAGTGAGTG 57.675 47.619 0.00 0.00 0.00 3.51
3042 3278 5.395768 GGATTACATACAGAGCCAAGTGAGT 60.396 44.000 0.00 0.00 0.00 3.41
3043 3279 5.053145 GGATTACATACAGAGCCAAGTGAG 58.947 45.833 0.00 0.00 0.00 3.51
3044 3280 4.469586 TGGATTACATACAGAGCCAAGTGA 59.530 41.667 0.00 0.00 0.00 3.41
3045 3281 4.769688 TGGATTACATACAGAGCCAAGTG 58.230 43.478 0.00 0.00 0.00 3.16
3046 3282 5.636903 ATGGATTACATACAGAGCCAAGT 57.363 39.130 0.00 0.00 38.26 3.16
3047 3283 6.648310 CACTATGGATTACATACAGAGCCAAG 59.352 42.308 0.00 0.00 35.86 3.61
3048 3284 6.326323 TCACTATGGATTACATACAGAGCCAA 59.674 38.462 0.00 0.00 35.86 4.52
3049 3285 5.838521 TCACTATGGATTACATACAGAGCCA 59.161 40.000 0.00 0.00 35.86 4.75
3050 3286 6.346477 TCACTATGGATTACATACAGAGCC 57.654 41.667 0.00 0.00 35.86 4.70
3051 3287 8.839310 ATTTCACTATGGATTACATACAGAGC 57.161 34.615 0.00 0.00 35.86 4.09
3105 3341 3.390311 AGGAACGGTGGGAGTAATATTCC 59.610 47.826 0.00 0.00 35.60 3.01
3106 3342 4.684484 AGGAACGGTGGGAGTAATATTC 57.316 45.455 0.00 0.00 0.00 1.75
3107 3343 6.564557 TTTAGGAACGGTGGGAGTAATATT 57.435 37.500 0.00 0.00 0.00 1.28
3108 3344 6.758806 ATTTAGGAACGGTGGGAGTAATAT 57.241 37.500 0.00 0.00 0.00 1.28
3109 3345 7.860649 ATATTTAGGAACGGTGGGAGTAATA 57.139 36.000 0.00 0.00 0.00 0.98
3110 3346 6.758806 ATATTTAGGAACGGTGGGAGTAAT 57.241 37.500 0.00 0.00 0.00 1.89
3111 3347 6.564557 AATATTTAGGAACGGTGGGAGTAA 57.435 37.500 0.00 0.00 0.00 2.24
3112 3348 6.070078 ACAAATATTTAGGAACGGTGGGAGTA 60.070 38.462 0.00 0.00 0.00 2.59
3113 3349 5.190677 CAAATATTTAGGAACGGTGGGAGT 58.809 41.667 0.00 0.00 0.00 3.85
3114 3350 5.190677 ACAAATATTTAGGAACGGTGGGAG 58.809 41.667 0.00 0.00 0.00 4.30
3115 3351 5.045432 AGACAAATATTTAGGAACGGTGGGA 60.045 40.000 0.00 0.00 0.00 4.37
3116 3352 5.190677 AGACAAATATTTAGGAACGGTGGG 58.809 41.667 0.00 0.00 0.00 4.61
3117 3353 6.753107 AAGACAAATATTTAGGAACGGTGG 57.247 37.500 0.00 0.00 0.00 4.61
3118 3354 8.040716 AGAAAGACAAATATTTAGGAACGGTG 57.959 34.615 0.00 0.00 0.00 4.94
3119 3355 9.379791 CTAGAAAGACAAATATTTAGGAACGGT 57.620 33.333 0.00 0.00 0.00 4.83
3120 3356 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3131 3367 9.923143 TTGTCGAAATCTCTAGAAAGACAAATA 57.077 29.630 15.51 2.34 42.14 1.40
3132 3368 8.833231 TTGTCGAAATCTCTAGAAAGACAAAT 57.167 30.769 15.51 0.00 42.14 2.32
3133 3369 7.926555 ACTTGTCGAAATCTCTAGAAAGACAAA 59.073 33.333 17.13 8.26 43.67 2.83
3134 3370 7.382488 CACTTGTCGAAATCTCTAGAAAGACAA 59.618 37.037 16.28 16.28 42.63 3.18
3135 3371 6.863645 CACTTGTCGAAATCTCTAGAAAGACA 59.136 38.462 0.00 1.29 35.86 3.41
3136 3372 6.309251 CCACTTGTCGAAATCTCTAGAAAGAC 59.691 42.308 0.00 0.00 0.00 3.01
3137 3373 6.390721 CCACTTGTCGAAATCTCTAGAAAGA 58.609 40.000 0.00 0.00 0.00 2.52
3138 3374 5.062809 GCCACTTGTCGAAATCTCTAGAAAG 59.937 44.000 0.00 0.00 0.00 2.62
3139 3375 4.929808 GCCACTTGTCGAAATCTCTAGAAA 59.070 41.667 0.00 0.00 0.00 2.52
3140 3376 4.220821 AGCCACTTGTCGAAATCTCTAGAA 59.779 41.667 0.00 0.00 0.00 2.10
3141 3377 3.764434 AGCCACTTGTCGAAATCTCTAGA 59.236 43.478 0.00 0.00 0.00 2.43
3142 3378 4.116747 AGCCACTTGTCGAAATCTCTAG 57.883 45.455 0.00 0.00 0.00 2.43
3143 3379 4.461431 TGTAGCCACTTGTCGAAATCTCTA 59.539 41.667 0.00 0.00 0.00 2.43
3144 3380 3.258372 TGTAGCCACTTGTCGAAATCTCT 59.742 43.478 0.00 0.00 0.00 3.10
3145 3381 3.585862 TGTAGCCACTTGTCGAAATCTC 58.414 45.455 0.00 0.00 0.00 2.75
3146 3382 3.678056 TGTAGCCACTTGTCGAAATCT 57.322 42.857 0.00 0.00 0.00 2.40
3147 3383 4.026804 CGTATGTAGCCACTTGTCGAAATC 60.027 45.833 0.00 0.00 0.00 2.17
3148 3384 3.863424 CGTATGTAGCCACTTGTCGAAAT 59.137 43.478 0.00 0.00 0.00 2.17
3149 3385 3.247442 CGTATGTAGCCACTTGTCGAAA 58.753 45.455 0.00 0.00 0.00 3.46
3150 3386 2.416296 CCGTATGTAGCCACTTGTCGAA 60.416 50.000 0.00 0.00 0.00 3.71
3151 3387 1.133598 CCGTATGTAGCCACTTGTCGA 59.866 52.381 0.00 0.00 0.00 4.20
3152 3388 1.133598 TCCGTATGTAGCCACTTGTCG 59.866 52.381 0.00 0.00 0.00 4.35
3153 3389 2.810650 CTCCGTATGTAGCCACTTGTC 58.189 52.381 0.00 0.00 0.00 3.18
3154 3390 1.134788 GCTCCGTATGTAGCCACTTGT 60.135 52.381 0.00 0.00 32.40 3.16
3155 3391 1.134818 TGCTCCGTATGTAGCCACTTG 60.135 52.381 0.00 0.00 37.97 3.16
3156 3392 1.191535 TGCTCCGTATGTAGCCACTT 58.808 50.000 0.00 0.00 37.97 3.16
3157 3393 1.191535 TTGCTCCGTATGTAGCCACT 58.808 50.000 0.00 0.00 37.97 4.00
3158 3394 2.018542 TTTGCTCCGTATGTAGCCAC 57.981 50.000 0.00 0.00 37.97 5.01
3159 3395 2.772077 TTTTGCTCCGTATGTAGCCA 57.228 45.000 0.00 0.00 37.97 4.75
3160 3396 3.202906 TCATTTTGCTCCGTATGTAGCC 58.797 45.455 0.00 0.00 37.97 3.93
3161 3397 3.871594 ACTCATTTTGCTCCGTATGTAGC 59.128 43.478 0.00 0.00 39.25 3.58
3162 3398 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3163 3399 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3164 3400 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3165 3401 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3166 3402 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3167 3403 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3168 3404 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3169 3405 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3170 3406 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3171 3407 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3203 3439 9.511272 ACTACCACATACGAATGTATATAGACA 57.489 33.333 2.07 2.07 44.70 3.41
3204 3440 9.985318 GACTACCACATACGAATGTATATAGAC 57.015 37.037 0.00 0.00 44.70 2.59
3205 3441 9.170734 GGACTACCACATACGAATGTATATAGA 57.829 37.037 0.00 0.00 44.70 1.98
3206 3442 8.953313 TGGACTACCACATACGAATGTATATAG 58.047 37.037 0.00 0.00 44.70 1.31
3207 3443 8.866970 TGGACTACCACATACGAATGTATATA 57.133 34.615 0.00 0.00 44.70 0.86
3208 3444 7.770366 TGGACTACCACATACGAATGTATAT 57.230 36.000 0.00 0.00 44.70 0.86
3253 3489 9.725206 ACTACTCCCTCTGTTCCTAAATATTTA 57.275 33.333 7.66 7.66 0.00 1.40
3254 3490 8.625467 ACTACTCCCTCTGTTCCTAAATATTT 57.375 34.615 5.89 5.89 0.00 1.40
3255 3491 8.625467 AACTACTCCCTCTGTTCCTAAATATT 57.375 34.615 0.00 0.00 0.00 1.28
3256 3492 8.625467 AAACTACTCCCTCTGTTCCTAAATAT 57.375 34.615 0.00 0.00 0.00 1.28
3257 3493 7.899709 AGAAACTACTCCCTCTGTTCCTAAATA 59.100 37.037 0.00 0.00 0.00 1.40
3258 3494 6.731448 AGAAACTACTCCCTCTGTTCCTAAAT 59.269 38.462 0.00 0.00 0.00 1.40
3259 3495 6.082707 AGAAACTACTCCCTCTGTTCCTAAA 58.917 40.000 0.00 0.00 0.00 1.85
3260 3496 5.652324 AGAAACTACTCCCTCTGTTCCTAA 58.348 41.667 0.00 0.00 0.00 2.69
3261 3497 5.272405 AGAAACTACTCCCTCTGTTCCTA 57.728 43.478 0.00 0.00 0.00 2.94
3262 3498 4.134933 AGAAACTACTCCCTCTGTTCCT 57.865 45.455 0.00 0.00 0.00 3.36
3263 3499 6.547930 AATAGAAACTACTCCCTCTGTTCC 57.452 41.667 0.00 0.00 0.00 3.62
3264 3500 7.387643 ACAAATAGAAACTACTCCCTCTGTTC 58.612 38.462 0.00 0.00 0.00 3.18
3265 3501 7.317722 ACAAATAGAAACTACTCCCTCTGTT 57.682 36.000 0.00 0.00 0.00 3.16
3266 3502 6.936968 ACAAATAGAAACTACTCCCTCTGT 57.063 37.500 0.00 0.00 0.00 3.41
3267 3503 6.595716 CCAACAAATAGAAACTACTCCCTCTG 59.404 42.308 0.00 0.00 0.00 3.35
3268 3504 6.296489 CCCAACAAATAGAAACTACTCCCTCT 60.296 42.308 0.00 0.00 0.00 3.69
3269 3505 5.880887 CCCAACAAATAGAAACTACTCCCTC 59.119 44.000 0.00 0.00 0.00 4.30
3270 3506 5.312443 ACCCAACAAATAGAAACTACTCCCT 59.688 40.000 0.00 0.00 0.00 4.20
3271 3507 5.567430 ACCCAACAAATAGAAACTACTCCC 58.433 41.667 0.00 0.00 0.00 4.30
3272 3508 7.392418 AGTACCCAACAAATAGAAACTACTCC 58.608 38.462 0.00 0.00 0.00 3.85
3273 3509 8.843885 AAGTACCCAACAAATAGAAACTACTC 57.156 34.615 0.00 0.00 0.00 2.59
3274 3510 9.281371 GAAAGTACCCAACAAATAGAAACTACT 57.719 33.333 0.00 0.00 0.00 2.57
3275 3511 9.281371 AGAAAGTACCCAACAAATAGAAACTAC 57.719 33.333 0.00 0.00 0.00 2.73
3276 3512 9.280174 CAGAAAGTACCCAACAAATAGAAACTA 57.720 33.333 0.00 0.00 0.00 2.24
3277 3513 7.255486 GCAGAAAGTACCCAACAAATAGAAACT 60.255 37.037 0.00 0.00 0.00 2.66
3278 3514 6.861572 GCAGAAAGTACCCAACAAATAGAAAC 59.138 38.462 0.00 0.00 0.00 2.78
3279 3515 6.547880 TGCAGAAAGTACCCAACAAATAGAAA 59.452 34.615 0.00 0.00 0.00 2.52
3280 3516 6.065374 TGCAGAAAGTACCCAACAAATAGAA 58.935 36.000 0.00 0.00 0.00 2.10
3281 3517 5.626142 TGCAGAAAGTACCCAACAAATAGA 58.374 37.500 0.00 0.00 0.00 1.98
3282 3518 5.619981 GCTGCAGAAAGTACCCAACAAATAG 60.620 44.000 20.43 0.00 0.00 1.73
3286 3522 1.953686 GCTGCAGAAAGTACCCAACAA 59.046 47.619 20.43 0.00 0.00 2.83
3296 3532 1.131420 GCGACGAAGCTGCAGAAAG 59.869 57.895 20.43 7.64 0.00 2.62
3392 3631 6.715344 TTGTACTACCGCTGTTTCTAAATG 57.285 37.500 0.00 0.00 0.00 2.32
3426 3665 6.826741 GTCTAGCCACACCCTTCAAAATAATA 59.173 38.462 0.00 0.00 0.00 0.98
3427 3666 5.652452 GTCTAGCCACACCCTTCAAAATAAT 59.348 40.000 0.00 0.00 0.00 1.28
3461 3715 7.331055 GCGAGATTCGATTTAGTTACAAGAAG 58.669 38.462 2.20 0.00 43.74 2.85
3467 3721 5.857517 CCTAGGCGAGATTCGATTTAGTTAC 59.142 44.000 0.00 0.00 43.74 2.50
3478 3732 1.816224 CTAGAGGCCTAGGCGAGATTC 59.184 57.143 27.24 17.69 43.06 2.52
3495 3749 5.162075 CGTCACCTCTTCCAAAAGTACTAG 58.838 45.833 0.00 0.00 33.95 2.57
3497 3751 3.802675 GCGTCACCTCTTCCAAAAGTACT 60.803 47.826 0.00 0.00 33.95 2.73
3506 3760 1.519455 CGGATGCGTCACCTCTTCC 60.519 63.158 8.47 0.00 0.00 3.46
3507 3761 1.078759 CACGGATGCGTCACCTCTTC 61.079 60.000 10.14 0.00 0.00 2.87
3544 3798 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
3545 3799 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
3546 3800 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
3547 3801 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
3549 3803 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
3550 3804 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
3551 3805 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
3552 3806 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
3553 3807 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
3554 3808 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
3555 3809 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
3557 3811 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
3558 3812 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
3559 3813 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
3560 3814 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
3561 3815 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
3562 3816 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
3563 3817 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
3564 3818 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
3565 3819 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
3566 3820 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
3567 3821 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
3568 3822 6.016777 AGTCACTTGTTGAAATGCCTAGAAAG 60.017 38.462 0.00 0.00 35.39 2.62
3569 3823 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
3570 3824 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
3571 3825 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
3572 3826 5.700832 TGTAGTCACTTGTTGAAATGCCTAG 59.299 40.000 0.00 0.00 35.39 3.02
3573 3827 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
3574 3828 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
3575 3829 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
3576 3830 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
3577 3831 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
3578 3832 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3579 3833 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3580 3834 5.010314 ACTCCGTATGTAGTCACTTGTTGAA 59.990 40.000 0.00 0.00 35.39 2.69
3581 3835 4.521639 ACTCCGTATGTAGTCACTTGTTGA 59.478 41.667 0.00 0.00 0.00 3.18
3582 3836 4.806330 ACTCCGTATGTAGTCACTTGTTG 58.194 43.478 0.00 0.00 0.00 3.33
3583 3837 6.579666 TTACTCCGTATGTAGTCACTTGTT 57.420 37.500 0.00 0.00 0.00 2.83
3584 3838 6.579666 TTTACTCCGTATGTAGTCACTTGT 57.420 37.500 0.00 0.00 0.00 3.16
3585 3839 7.758076 TCATTTTACTCCGTATGTAGTCACTTG 59.242 37.037 0.00 0.00 0.00 3.16
3586 3840 7.833786 TCATTTTACTCCGTATGTAGTCACTT 58.166 34.615 0.00 0.00 0.00 3.16
3587 3841 7.122353 ACTCATTTTACTCCGTATGTAGTCACT 59.878 37.037 0.00 0.00 0.00 3.41
3588 3842 7.220300 CACTCATTTTACTCCGTATGTAGTCAC 59.780 40.741 0.00 0.00 0.00 3.67
3589 3843 7.121611 TCACTCATTTTACTCCGTATGTAGTCA 59.878 37.037 0.00 0.00 0.00 3.41
3590 3844 7.478322 TCACTCATTTTACTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
3591 3845 7.400599 TCACTCATTTTACTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
3592 3846 8.873215 ATTCACTCATTTTACTCCGTATGTAG 57.127 34.615 0.00 0.00 0.00 2.74
3593 3847 8.692710 AGATTCACTCATTTTACTCCGTATGTA 58.307 33.333 0.00 0.00 0.00 2.29
3594 3848 7.556844 AGATTCACTCATTTTACTCCGTATGT 58.443 34.615 0.00 0.00 0.00 2.29
3595 3849 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
3596 3850 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
3597 3851 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
3598 3852 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
3599 3853 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.