Multiple sequence alignment - TraesCS4D01G312700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G312700 chr4D 100.000 2564 0 0 1 2564 478991289 478993852 0.000000e+00 4735.0
1 TraesCS4D01G312700 chr4D 84.429 289 43 2 1028 1315 478999194 478998907 1.500000e-72 283.0
2 TraesCS4D01G312700 chr4D 81.579 266 45 4 1033 1296 382738013 382738276 1.540000e-52 217.0
3 TraesCS4D01G312700 chr4B 92.667 1500 80 15 572 2049 605682442 605683933 0.000000e+00 2134.0
4 TraesCS4D01G312700 chr4B 96.383 470 13 3 1 468 605681865 605682332 0.000000e+00 771.0
5 TraesCS4D01G312700 chr4B 100.000 31 0 0 2033 2063 605683949 605683979 9.910000e-05 58.4
6 TraesCS4D01G312700 chr4A 89.073 1208 50 21 717 1913 685371844 685372980 0.000000e+00 1424.0
7 TraesCS4D01G312700 chr4A 93.314 344 15 2 1 336 685371147 685371490 3.810000e-138 501.0
8 TraesCS4D01G312700 chr4A 84.667 300 44 2 1017 1315 685381459 685381161 5.360000e-77 298.0
9 TraesCS4D01G312700 chr4A 81.203 266 46 4 1033 1296 64956723 64956986 7.190000e-51 211.0
10 TraesCS4D01G312700 chr4A 77.273 264 47 11 1031 1289 544047785 544047530 2.660000e-30 143.0
11 TraesCS4D01G312700 chr4A 97.500 40 1 0 1962 2001 685373076 685373115 4.580000e-08 69.4
12 TraesCS4D01G312700 chr4A 93.182 44 3 0 2021 2064 685373118 685373161 5.920000e-07 65.8
13 TraesCS4D01G312700 chr6D 86.813 273 32 4 1026 1296 462273021 462272751 4.150000e-78 302.0
14 TraesCS4D01G312700 chr6D 91.228 57 5 0 2067 2123 91845208 91845152 7.610000e-11 78.7
15 TraesCS4D01G312700 chr6B 86.029 272 36 2 1026 1296 704751359 704751629 8.970000e-75 291.0
16 TraesCS4D01G312700 chr6B 97.778 45 1 0 2066 2110 543853547 543853591 7.610000e-11 78.7
17 TraesCS4D01G312700 chr5A 96.154 52 2 0 2066 2117 31271742 31271691 4.550000e-13 86.1
18 TraesCS4D01G312700 chr5A 100.000 45 0 0 2065 2109 687352398 687352442 1.630000e-12 84.2
19 TraesCS4D01G312700 chr5A 96.000 50 1 1 2066 2115 459334814 459334862 2.110000e-11 80.5
20 TraesCS4D01G312700 chr2A 95.918 49 2 0 2066 2114 337719142 337719190 2.110000e-11 80.5
21 TraesCS4D01G312700 chr2A 95.918 49 2 0 2066 2114 337856529 337856481 2.110000e-11 80.5
22 TraesCS4D01G312700 chr2A 95.918 49 2 0 2066 2114 337858935 337858983 2.110000e-11 80.5
23 TraesCS4D01G312700 chr7D 91.071 56 5 0 2053 2108 554684104 554684159 2.740000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G312700 chr4D 478991289 478993852 2563 False 4735.00 4735 100.00000 1 2564 1 chr4D.!!$F2 2563
1 TraesCS4D01G312700 chr4B 605681865 605683979 2114 False 987.80 2134 96.35000 1 2063 3 chr4B.!!$F1 2062
2 TraesCS4D01G312700 chr4A 685371147 685373161 2014 False 515.05 1424 93.26725 1 2064 4 chr4A.!!$F2 2063

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
256 261 0.249398 ACGTCCCAGCTAACACATCC 59.751 55.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2022 2230 0.036875 AGAGTTTACTGTGCCAGGCC 59.963 55.0 9.64 0.0 35.51 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
256 261 0.249398 ACGTCCCAGCTAACACATCC 59.751 55.000 0.00 0.00 0.00 3.51
257 262 0.537188 CGTCCCAGCTAACACATCCT 59.463 55.000 0.00 0.00 0.00 3.24
267 272 2.760634 AACACATCCTATCACACGCA 57.239 45.000 0.00 0.00 0.00 5.24
272 277 2.205074 CATCCTATCACACGCAACCTC 58.795 52.381 0.00 0.00 0.00 3.85
407 418 2.279741 TGACAGTGCAGTGTGTTTCTC 58.720 47.619 31.24 15.82 0.00 2.87
502 562 9.899226 ATTTCTAGTAAAAAGACATTTCAGTGC 57.101 29.630 0.00 0.00 0.00 4.40
517 577 8.147058 ACATTTCAGTGCTCTAGTCCTATAATG 58.853 37.037 0.00 0.00 0.00 1.90
519 579 8.484214 TTTCAGTGCTCTAGTCCTATAATGAT 57.516 34.615 0.00 0.00 0.00 2.45
520 580 8.484214 TTCAGTGCTCTAGTCCTATAATGATT 57.516 34.615 0.00 0.00 0.00 2.57
525 585 9.547753 GTGCTCTAGTCCTATAATGATTTTTCA 57.452 33.333 0.00 0.00 0.00 2.69
575 635 0.457166 TCGTAACGTCGCATCAAGGG 60.457 55.000 0.00 0.00 0.00 3.95
601 742 2.759538 AGCATAGCGAGTTCGTCTAC 57.240 50.000 3.27 0.00 42.22 2.59
613 754 1.575244 TCGTCTACGATCAGTACCCG 58.425 55.000 0.14 0.00 44.22 5.28
671 812 3.065233 GTGAGCCGTCAATCATGCAAATA 59.935 43.478 0.00 0.00 33.27 1.40
711 852 6.143438 CACACATGTGCATTTCTTCTTCTTTC 59.857 38.462 25.68 0.00 39.39 2.62
747 889 7.112779 AGTTTAATGGCACTATTCAAGTAGCT 58.887 34.615 0.00 0.00 35.76 3.32
793 935 1.742768 CCTCGCCCTCCTGTACATC 59.257 63.158 0.00 0.00 0.00 3.06
809 951 1.945394 ACATCATGCGCATTCTTCTCC 59.055 47.619 22.81 0.00 0.00 3.71
947 1089 4.331968 AGCTCGATCATAAGCTAGCTAGT 58.668 43.478 19.70 5.83 46.73 2.57
959 1101 4.537433 GCTAGTCAGGCCAGGCGG 62.537 72.222 5.01 0.00 0.00 6.13
980 1122 2.181584 GATCGGACGATCGGGCTAT 58.818 57.895 20.98 7.50 41.09 2.97
1149 1291 0.960364 CCATCCACAAGGTGTTCGGG 60.960 60.000 0.00 0.00 35.89 5.14
1567 1712 0.180642 GGAAGGCAGCTACTAACCCC 59.819 60.000 0.00 0.00 0.00 4.95
1611 1756 1.145803 CGTTCGTTCCCCTGAGAAAC 58.854 55.000 0.00 0.00 0.00 2.78
1618 1766 1.645710 TCCCCTGAGAAACCTGAGAC 58.354 55.000 0.00 0.00 0.00 3.36
1623 1772 3.332919 CCTGAGAAACCTGAGACATGTG 58.667 50.000 1.15 0.00 0.00 3.21
1698 1851 1.810030 CGGTCTCGGCTGTAAAGGC 60.810 63.158 0.00 0.00 0.00 4.35
1702 1855 0.901827 TCTCGGCTGTAAAGGCATCA 59.098 50.000 7.33 0.00 0.00 3.07
1868 2021 0.947960 TGTTCGGCGAAATTTCAGCA 59.052 45.000 25.48 13.19 0.00 4.41
1911 2066 3.552068 GGTTACGCTTGTGCTGGAATTTT 60.552 43.478 0.00 0.00 36.97 1.82
1912 2067 2.888834 ACGCTTGTGCTGGAATTTTT 57.111 40.000 0.00 0.00 36.97 1.94
1949 2147 0.106708 GAGGTTGCAGTGGAGTGACA 59.893 55.000 0.00 0.00 0.00 3.58
1950 2148 0.179045 AGGTTGCAGTGGAGTGACAC 60.179 55.000 0.00 0.00 41.63 3.67
1951 2149 1.498865 GGTTGCAGTGGAGTGACACG 61.499 60.000 0.00 0.00 45.80 4.49
1952 2150 1.227527 TTGCAGTGGAGTGACACGG 60.228 57.895 0.00 0.00 45.80 4.94
1955 2153 2.923035 AGTGGAGTGACACGGGGG 60.923 66.667 0.00 0.00 45.80 5.40
1956 2154 3.239253 GTGGAGTGACACGGGGGT 61.239 66.667 0.00 0.00 0.00 4.95
1957 2155 3.238497 TGGAGTGACACGGGGGTG 61.238 66.667 0.00 0.00 0.00 4.61
1958 2156 4.699522 GGAGTGACACGGGGGTGC 62.700 72.222 0.00 0.00 0.00 5.01
1959 2157 3.626924 GAGTGACACGGGGGTGCT 61.627 66.667 0.00 0.00 0.00 4.40
1960 2158 3.591254 GAGTGACACGGGGGTGCTC 62.591 68.421 0.00 0.00 0.00 4.26
2005 2212 3.314635 CAGGCTCTAATCCAGCAACATTC 59.685 47.826 0.00 0.00 38.77 2.67
2017 2225 4.401519 CCAGCAACATTCATGAAGAGGAAT 59.598 41.667 14.54 0.00 32.79 3.01
2022 2230 6.510799 GCAACATTCATGAAGAGGAATAGTCG 60.511 42.308 14.54 0.00 30.82 4.18
2027 2235 1.757118 TGAAGAGGAATAGTCGGCCTG 59.243 52.381 0.00 0.00 30.70 4.85
2029 2237 1.069935 GAGGAATAGTCGGCCTGGC 59.930 63.158 11.05 11.05 30.70 4.85
2030 2238 1.686325 GAGGAATAGTCGGCCTGGCA 61.686 60.000 22.05 0.00 30.70 4.92
2064 2304 7.841956 TCTACTCTTTGTTCTCCTTCCAATAG 58.158 38.462 0.00 0.00 0.00 1.73
2065 2305 5.249420 ACTCTTTGTTCTCCTTCCAATAGC 58.751 41.667 0.00 0.00 0.00 2.97
2066 2306 5.221925 ACTCTTTGTTCTCCTTCCAATAGCA 60.222 40.000 0.00 0.00 0.00 3.49
2067 2307 5.003804 TCTTTGTTCTCCTTCCAATAGCAC 58.996 41.667 0.00 0.00 0.00 4.40
2068 2308 4.640771 TTGTTCTCCTTCCAATAGCACT 57.359 40.909 0.00 0.00 0.00 4.40
2069 2309 5.755409 TTGTTCTCCTTCCAATAGCACTA 57.245 39.130 0.00 0.00 0.00 2.74
2070 2310 5.344743 TGTTCTCCTTCCAATAGCACTAG 57.655 43.478 0.00 0.00 0.00 2.57
2071 2311 4.777896 TGTTCTCCTTCCAATAGCACTAGT 59.222 41.667 0.00 0.00 0.00 2.57
2072 2312 5.112686 GTTCTCCTTCCAATAGCACTAGTG 58.887 45.833 18.93 18.93 0.00 2.74
2073 2313 4.353777 TCTCCTTCCAATAGCACTAGTGT 58.646 43.478 23.44 12.90 29.96 3.55
2074 2314 4.402793 TCTCCTTCCAATAGCACTAGTGTC 59.597 45.833 23.44 15.50 29.96 3.67
2075 2315 4.093743 TCCTTCCAATAGCACTAGTGTCA 58.906 43.478 23.44 12.25 29.96 3.58
2076 2316 4.530553 TCCTTCCAATAGCACTAGTGTCAA 59.469 41.667 23.44 10.14 29.96 3.18
2077 2317 5.012664 TCCTTCCAATAGCACTAGTGTCAAA 59.987 40.000 23.44 7.75 29.96 2.69
2078 2318 5.705441 CCTTCCAATAGCACTAGTGTCAAAA 59.295 40.000 23.44 8.78 29.96 2.44
2079 2319 6.206634 CCTTCCAATAGCACTAGTGTCAAAAA 59.793 38.462 23.44 9.22 29.96 1.94
2080 2320 6.554334 TCCAATAGCACTAGTGTCAAAAAC 57.446 37.500 23.44 5.58 29.96 2.43
2081 2321 6.058833 TCCAATAGCACTAGTGTCAAAAACA 58.941 36.000 23.44 0.40 34.78 2.83
2102 2342 9.751542 AAAACACTCTTATATTATGAGACGGAG 57.248 33.333 0.00 0.00 34.90 4.63
2103 2343 7.455641 ACACTCTTATATTATGAGACGGAGG 57.544 40.000 0.00 0.00 34.90 4.30
2104 2344 6.434652 ACACTCTTATATTATGAGACGGAGGG 59.565 42.308 0.00 0.00 34.90 4.30
2105 2345 6.659668 CACTCTTATATTATGAGACGGAGGGA 59.340 42.308 0.00 0.00 34.90 4.20
2106 2346 6.887545 ACTCTTATATTATGAGACGGAGGGAG 59.112 42.308 0.00 0.00 34.90 4.30
2107 2347 6.791371 TCTTATATTATGAGACGGAGGGAGT 58.209 40.000 0.00 0.00 0.00 3.85
2108 2348 7.925622 TCTTATATTATGAGACGGAGGGAGTA 58.074 38.462 0.00 0.00 0.00 2.59
2109 2349 7.828223 TCTTATATTATGAGACGGAGGGAGTAC 59.172 40.741 0.00 0.00 0.00 2.73
2110 2350 2.653234 TATGAGACGGAGGGAGTACC 57.347 55.000 0.00 0.00 40.67 3.34
2128 2368 2.879103 CCTCTTAAGGGCAACTCCAA 57.121 50.000 1.85 0.00 39.21 3.53
2129 2369 2.437413 CCTCTTAAGGGCAACTCCAAC 58.563 52.381 1.85 0.00 39.21 3.77
2130 2370 2.076863 CTCTTAAGGGCAACTCCAACG 58.923 52.381 1.85 0.00 36.21 4.10
2131 2371 1.165270 CTTAAGGGCAACTCCAACGG 58.835 55.000 0.00 0.00 36.21 4.44
2132 2372 0.250989 TTAAGGGCAACTCCAACGGG 60.251 55.000 0.00 0.00 36.21 5.28
2133 2373 1.420532 TAAGGGCAACTCCAACGGGT 61.421 55.000 0.00 0.00 36.21 5.28
2134 2374 2.203437 GGGCAACTCCAACGGGTT 60.203 61.111 0.00 0.00 36.21 4.11
2135 2375 2.265904 GGGCAACTCCAACGGGTTC 61.266 63.158 0.00 0.00 36.21 3.62
2136 2376 1.527380 GGCAACTCCAACGGGTTCA 60.527 57.895 0.00 0.00 34.93 3.18
2137 2377 1.652563 GCAACTCCAACGGGTTCAC 59.347 57.895 0.00 0.00 34.93 3.18
2138 2378 1.938861 CAACTCCAACGGGTTCACG 59.061 57.895 0.00 0.00 40.31 4.35
2139 2379 1.227734 AACTCCAACGGGTTCACGG 60.228 57.895 0.00 0.00 38.39 4.94
2140 2380 1.688269 AACTCCAACGGGTTCACGGA 61.688 55.000 0.00 0.00 38.39 4.69
2141 2381 1.070105 CTCCAACGGGTTCACGGAA 59.930 57.895 0.00 0.00 38.39 4.30
2142 2382 1.226030 CTCCAACGGGTTCACGGAAC 61.226 60.000 7.90 7.90 41.32 3.62
2158 2398 2.484889 GGAACGGATAGCATCAAGTCC 58.515 52.381 0.00 0.00 0.00 3.85
2159 2399 2.158957 GGAACGGATAGCATCAAGTCCA 60.159 50.000 0.00 0.00 0.00 4.02
2160 2400 3.495100 GGAACGGATAGCATCAAGTCCAT 60.495 47.826 0.00 0.00 0.00 3.41
2161 2401 4.262463 GGAACGGATAGCATCAAGTCCATA 60.262 45.833 0.00 0.00 0.00 2.74
2162 2402 4.955811 ACGGATAGCATCAAGTCCATAA 57.044 40.909 0.00 0.00 0.00 1.90
2163 2403 5.290493 ACGGATAGCATCAAGTCCATAAA 57.710 39.130 0.00 0.00 0.00 1.40
2164 2404 5.057149 ACGGATAGCATCAAGTCCATAAAC 58.943 41.667 0.00 0.00 0.00 2.01
2165 2405 5.056480 CGGATAGCATCAAGTCCATAAACA 58.944 41.667 0.00 0.00 0.00 2.83
2166 2406 5.050091 CGGATAGCATCAAGTCCATAAACAC 60.050 44.000 0.00 0.00 0.00 3.32
2167 2407 5.050091 GGATAGCATCAAGTCCATAAACACG 60.050 44.000 0.00 0.00 0.00 4.49
2168 2408 3.674997 AGCATCAAGTCCATAAACACGT 58.325 40.909 0.00 0.00 0.00 4.49
2169 2409 3.684788 AGCATCAAGTCCATAAACACGTC 59.315 43.478 0.00 0.00 0.00 4.34
2170 2410 3.181510 GCATCAAGTCCATAAACACGTCC 60.182 47.826 0.00 0.00 0.00 4.79
2171 2411 3.755112 TCAAGTCCATAAACACGTCCA 57.245 42.857 0.00 0.00 0.00 4.02
2172 2412 4.074627 TCAAGTCCATAAACACGTCCAA 57.925 40.909 0.00 0.00 0.00 3.53
2173 2413 4.452825 TCAAGTCCATAAACACGTCCAAA 58.547 39.130 0.00 0.00 0.00 3.28
2174 2414 5.067273 TCAAGTCCATAAACACGTCCAAAT 58.933 37.500 0.00 0.00 0.00 2.32
2175 2415 5.049060 TCAAGTCCATAAACACGTCCAAATG 60.049 40.000 0.00 0.00 0.00 2.32
2176 2416 4.394729 AGTCCATAAACACGTCCAAATGT 58.605 39.130 0.00 0.00 0.00 2.71
2177 2417 4.215399 AGTCCATAAACACGTCCAAATGTG 59.785 41.667 0.00 0.00 46.07 3.21
2183 2423 2.017357 CACGTCCAAATGTGTTCGTG 57.983 50.000 13.07 13.07 40.60 4.35
2184 2424 0.306533 ACGTCCAAATGTGTTCGTGC 59.693 50.000 2.53 0.00 33.24 5.34
2185 2425 0.306228 CGTCCAAATGTGTTCGTGCA 59.694 50.000 0.00 0.00 0.00 4.57
2186 2426 1.753956 GTCCAAATGTGTTCGTGCAC 58.246 50.000 6.82 6.82 39.65 4.57
2191 2431 3.268603 TGTGTTCGTGCACAGCGG 61.269 61.111 18.64 0.00 43.54 5.52
2192 2432 3.269347 GTGTTCGTGCACAGCGGT 61.269 61.111 18.64 0.00 39.07 5.68
2193 2433 1.952133 GTGTTCGTGCACAGCGGTA 60.952 57.895 18.64 0.00 39.07 4.02
2194 2434 1.952133 TGTTCGTGCACAGCGGTAC 60.952 57.895 18.64 5.04 0.00 3.34
2207 2447 3.522808 GGTACGAGAGCCGACCAT 58.477 61.111 0.00 0.00 41.76 3.55
2208 2448 1.359475 GGTACGAGAGCCGACCATC 59.641 63.158 0.00 0.00 41.76 3.51
2209 2449 1.359475 GTACGAGAGCCGACCATCC 59.641 63.158 0.00 0.00 41.76 3.51
2210 2450 2.184830 TACGAGAGCCGACCATCCG 61.185 63.158 0.00 0.00 41.76 4.18
2211 2451 2.598098 TACGAGAGCCGACCATCCGA 62.598 60.000 0.00 0.00 41.76 4.55
2212 2452 2.413765 GAGAGCCGACCATCCGAC 59.586 66.667 0.00 0.00 0.00 4.79
2213 2453 3.140225 GAGAGCCGACCATCCGACC 62.140 68.421 0.00 0.00 0.00 4.79
2214 2454 3.458163 GAGCCGACCATCCGACCA 61.458 66.667 0.00 0.00 0.00 4.02
2215 2455 2.764128 AGCCGACCATCCGACCAT 60.764 61.111 0.00 0.00 0.00 3.55
2216 2456 1.456892 AGCCGACCATCCGACCATA 60.457 57.895 0.00 0.00 0.00 2.74
2217 2457 0.832135 AGCCGACCATCCGACCATAT 60.832 55.000 0.00 0.00 0.00 1.78
2218 2458 0.389948 GCCGACCATCCGACCATATC 60.390 60.000 0.00 0.00 0.00 1.63
2219 2459 0.246635 CCGACCATCCGACCATATCC 59.753 60.000 0.00 0.00 0.00 2.59
2220 2460 0.966179 CGACCATCCGACCATATCCA 59.034 55.000 0.00 0.00 0.00 3.41
2221 2461 1.550524 CGACCATCCGACCATATCCAT 59.449 52.381 0.00 0.00 0.00 3.41
2222 2462 2.417379 CGACCATCCGACCATATCCATC 60.417 54.545 0.00 0.00 0.00 3.51
2223 2463 2.567169 GACCATCCGACCATATCCATCA 59.433 50.000 0.00 0.00 0.00 3.07
2224 2464 2.978978 ACCATCCGACCATATCCATCAA 59.021 45.455 0.00 0.00 0.00 2.57
2225 2465 3.394274 ACCATCCGACCATATCCATCAAA 59.606 43.478 0.00 0.00 0.00 2.69
2226 2466 4.043310 ACCATCCGACCATATCCATCAAAT 59.957 41.667 0.00 0.00 0.00 2.32
2227 2467 4.397103 CCATCCGACCATATCCATCAAATG 59.603 45.833 0.00 0.00 0.00 2.32
2228 2468 4.705110 TCCGACCATATCCATCAAATGT 57.295 40.909 0.00 0.00 0.00 2.71
2229 2469 5.047566 TCCGACCATATCCATCAAATGTT 57.952 39.130 0.00 0.00 0.00 2.71
2230 2470 5.063204 TCCGACCATATCCATCAAATGTTC 58.937 41.667 0.00 0.00 0.00 3.18
2231 2471 4.083855 CCGACCATATCCATCAAATGTTCG 60.084 45.833 0.00 0.00 35.91 3.95
2232 2472 4.611355 CGACCATATCCATCAAATGTTCGC 60.611 45.833 0.00 0.00 30.65 4.70
2233 2473 4.464008 ACCATATCCATCAAATGTTCGCT 58.536 39.130 0.00 0.00 0.00 4.93
2234 2474 4.516698 ACCATATCCATCAAATGTTCGCTC 59.483 41.667 0.00 0.00 0.00 5.03
2235 2475 4.758674 CCATATCCATCAAATGTTCGCTCT 59.241 41.667 0.00 0.00 0.00 4.09
2236 2476 5.240183 CCATATCCATCAAATGTTCGCTCTT 59.760 40.000 0.00 0.00 0.00 2.85
2237 2477 6.238842 CCATATCCATCAAATGTTCGCTCTTT 60.239 38.462 0.00 0.00 0.00 2.52
2238 2478 4.424061 TCCATCAAATGTTCGCTCTTTG 57.576 40.909 0.00 0.00 0.00 2.77
2239 2479 3.820467 TCCATCAAATGTTCGCTCTTTGT 59.180 39.130 0.00 0.00 32.89 2.83
2240 2480 4.083324 TCCATCAAATGTTCGCTCTTTGTC 60.083 41.667 0.00 0.00 32.89 3.18
2241 2481 3.896648 TCAAATGTTCGCTCTTTGTCC 57.103 42.857 0.00 0.00 32.89 4.02
2242 2482 3.210227 TCAAATGTTCGCTCTTTGTCCA 58.790 40.909 0.00 0.00 32.89 4.02
2243 2483 3.629855 TCAAATGTTCGCTCTTTGTCCAA 59.370 39.130 0.00 0.00 32.89 3.53
2244 2484 4.278170 TCAAATGTTCGCTCTTTGTCCAAT 59.722 37.500 0.00 0.00 32.89 3.16
2245 2485 5.471797 TCAAATGTTCGCTCTTTGTCCAATA 59.528 36.000 0.00 0.00 32.89 1.90
2246 2486 5.957842 AATGTTCGCTCTTTGTCCAATAA 57.042 34.783 0.00 0.00 0.00 1.40
2247 2487 5.957842 ATGTTCGCTCTTTGTCCAATAAA 57.042 34.783 0.00 0.00 0.00 1.40
2248 2488 5.759506 TGTTCGCTCTTTGTCCAATAAAA 57.240 34.783 0.00 0.00 0.00 1.52
2249 2489 6.137794 TGTTCGCTCTTTGTCCAATAAAAA 57.862 33.333 0.00 0.00 0.00 1.94
2250 2490 6.205784 TGTTCGCTCTTTGTCCAATAAAAAG 58.794 36.000 0.00 0.00 33.19 2.27
2251 2491 6.038825 TGTTCGCTCTTTGTCCAATAAAAAGA 59.961 34.615 0.00 0.00 37.54 2.52
2252 2492 6.817765 TCGCTCTTTGTCCAATAAAAAGAT 57.182 33.333 0.00 0.00 38.77 2.40
2253 2493 6.611381 TCGCTCTTTGTCCAATAAAAAGATG 58.389 36.000 0.00 0.00 38.77 2.90
2254 2494 5.801947 CGCTCTTTGTCCAATAAAAAGATGG 59.198 40.000 0.00 0.00 38.77 3.51
2255 2495 6.101997 GCTCTTTGTCCAATAAAAAGATGGG 58.898 40.000 0.00 0.00 38.77 4.00
2256 2496 6.071391 GCTCTTTGTCCAATAAAAAGATGGGA 60.071 38.462 0.00 0.00 38.77 4.37
2257 2497 7.466746 TCTTTGTCCAATAAAAAGATGGGAG 57.533 36.000 0.00 0.00 35.54 4.30
2258 2498 7.237982 TCTTTGTCCAATAAAAAGATGGGAGA 58.762 34.615 0.00 0.00 35.54 3.71
2259 2499 7.394359 TCTTTGTCCAATAAAAAGATGGGAGAG 59.606 37.037 0.00 0.00 35.54 3.20
2260 2500 6.387192 TGTCCAATAAAAAGATGGGAGAGA 57.613 37.500 0.00 0.00 28.83 3.10
2261 2501 6.789268 TGTCCAATAAAAAGATGGGAGAGAA 58.211 36.000 0.00 0.00 28.83 2.87
2262 2502 7.413446 TGTCCAATAAAAAGATGGGAGAGAAT 58.587 34.615 0.00 0.00 28.83 2.40
2263 2503 7.340232 TGTCCAATAAAAAGATGGGAGAGAATG 59.660 37.037 0.00 0.00 28.83 2.67
2264 2504 7.557719 GTCCAATAAAAAGATGGGAGAGAATGA 59.442 37.037 0.00 0.00 28.83 2.57
2265 2505 8.115384 TCCAATAAAAAGATGGGAGAGAATGAA 58.885 33.333 0.00 0.00 34.89 2.57
2266 2506 8.411683 CCAATAAAAAGATGGGAGAGAATGAAG 58.588 37.037 0.00 0.00 0.00 3.02
2267 2507 8.411683 CAATAAAAAGATGGGAGAGAATGAAGG 58.588 37.037 0.00 0.00 0.00 3.46
2268 2508 5.786121 AAAAGATGGGAGAGAATGAAGGA 57.214 39.130 0.00 0.00 0.00 3.36
2269 2509 5.370875 AAAGATGGGAGAGAATGAAGGAG 57.629 43.478 0.00 0.00 0.00 3.69
2270 2510 3.316501 AGATGGGAGAGAATGAAGGAGG 58.683 50.000 0.00 0.00 0.00 4.30
2271 2511 2.948889 TGGGAGAGAATGAAGGAGGA 57.051 50.000 0.00 0.00 0.00 3.71
2272 2512 2.756907 TGGGAGAGAATGAAGGAGGAG 58.243 52.381 0.00 0.00 0.00 3.69
2273 2513 1.416030 GGGAGAGAATGAAGGAGGAGC 59.584 57.143 0.00 0.00 0.00 4.70
2274 2514 1.068434 GGAGAGAATGAAGGAGGAGCG 59.932 57.143 0.00 0.00 0.00 5.03
2275 2515 2.028130 GAGAGAATGAAGGAGGAGCGA 58.972 52.381 0.00 0.00 0.00 4.93
2276 2516 2.428890 GAGAGAATGAAGGAGGAGCGAA 59.571 50.000 0.00 0.00 0.00 4.70
2277 2517 2.430332 AGAGAATGAAGGAGGAGCGAAG 59.570 50.000 0.00 0.00 0.00 3.79
2278 2518 1.484240 AGAATGAAGGAGGAGCGAAGG 59.516 52.381 0.00 0.00 0.00 3.46
2279 2519 1.208293 GAATGAAGGAGGAGCGAAGGT 59.792 52.381 0.00 0.00 46.54 3.50
2280 2520 2.160721 ATGAAGGAGGAGCGAAGGTA 57.839 50.000 0.00 0.00 39.88 3.08
2281 2521 1.475403 TGAAGGAGGAGCGAAGGTAG 58.525 55.000 0.00 0.00 39.88 3.18
2282 2522 0.747852 GAAGGAGGAGCGAAGGTAGG 59.252 60.000 0.00 0.00 39.88 3.18
2283 2523 0.041386 AAGGAGGAGCGAAGGTAGGT 59.959 55.000 0.00 0.00 39.88 3.08
2284 2524 0.041386 AGGAGGAGCGAAGGTAGGTT 59.959 55.000 0.00 0.00 39.88 3.50
2285 2525 0.903236 GGAGGAGCGAAGGTAGGTTT 59.097 55.000 0.00 0.00 39.88 3.27
2286 2526 1.134759 GGAGGAGCGAAGGTAGGTTTC 60.135 57.143 0.00 0.00 39.88 2.78
2287 2527 1.826096 GAGGAGCGAAGGTAGGTTTCT 59.174 52.381 0.00 0.00 39.88 2.52
2288 2528 1.550976 AGGAGCGAAGGTAGGTTTCTG 59.449 52.381 0.00 0.00 39.88 3.02
2289 2529 1.405661 GGAGCGAAGGTAGGTTTCTGG 60.406 57.143 0.00 0.00 39.88 3.86
2290 2530 1.275573 GAGCGAAGGTAGGTTTCTGGT 59.724 52.381 0.00 0.00 39.88 4.00
2291 2531 1.002087 AGCGAAGGTAGGTTTCTGGTG 59.998 52.381 0.00 0.00 35.08 4.17
2292 2532 1.944430 GCGAAGGTAGGTTTCTGGTGG 60.944 57.143 0.00 0.00 0.00 4.61
2293 2533 1.338769 CGAAGGTAGGTTTCTGGTGGG 60.339 57.143 0.00 0.00 0.00 4.61
2294 2534 1.703513 GAAGGTAGGTTTCTGGTGGGT 59.296 52.381 0.00 0.00 0.00 4.51
2295 2535 1.829138 AGGTAGGTTTCTGGTGGGTT 58.171 50.000 0.00 0.00 0.00 4.11
2296 2536 2.141067 AGGTAGGTTTCTGGTGGGTTT 58.859 47.619 0.00 0.00 0.00 3.27
2297 2537 2.158519 AGGTAGGTTTCTGGTGGGTTTG 60.159 50.000 0.00 0.00 0.00 2.93
2298 2538 2.158579 GGTAGGTTTCTGGTGGGTTTGA 60.159 50.000 0.00 0.00 0.00 2.69
2299 2539 2.364972 AGGTTTCTGGTGGGTTTGAG 57.635 50.000 0.00 0.00 0.00 3.02
2300 2540 1.133482 AGGTTTCTGGTGGGTTTGAGG 60.133 52.381 0.00 0.00 0.00 3.86
2301 2541 0.673985 GTTTCTGGTGGGTTTGAGGC 59.326 55.000 0.00 0.00 0.00 4.70
2302 2542 0.555769 TTTCTGGTGGGTTTGAGGCT 59.444 50.000 0.00 0.00 0.00 4.58
2303 2543 0.178992 TTCTGGTGGGTTTGAGGCTG 60.179 55.000 0.00 0.00 0.00 4.85
2304 2544 1.059584 TCTGGTGGGTTTGAGGCTGA 61.060 55.000 0.00 0.00 0.00 4.26
2305 2545 0.607489 CTGGTGGGTTTGAGGCTGAG 60.607 60.000 0.00 0.00 0.00 3.35
2306 2546 1.352622 TGGTGGGTTTGAGGCTGAGT 61.353 55.000 0.00 0.00 0.00 3.41
2307 2547 0.606673 GGTGGGTTTGAGGCTGAGTC 60.607 60.000 0.00 0.00 0.00 3.36
2308 2548 0.951040 GTGGGTTTGAGGCTGAGTCG 60.951 60.000 0.00 0.00 0.00 4.18
2309 2549 1.118965 TGGGTTTGAGGCTGAGTCGA 61.119 55.000 0.00 0.00 0.00 4.20
2310 2550 0.670854 GGGTTTGAGGCTGAGTCGAC 60.671 60.000 7.70 7.70 0.00 4.20
2311 2551 1.009389 GGTTTGAGGCTGAGTCGACG 61.009 60.000 10.46 0.00 0.00 5.12
2312 2552 0.318784 GTTTGAGGCTGAGTCGACGT 60.319 55.000 10.46 0.00 0.00 4.34
2313 2553 1.068748 GTTTGAGGCTGAGTCGACGTA 60.069 52.381 10.46 2.08 0.00 3.57
2314 2554 1.460504 TTGAGGCTGAGTCGACGTAT 58.539 50.000 10.46 0.00 0.00 3.06
2315 2555 1.015109 TGAGGCTGAGTCGACGTATC 58.985 55.000 10.46 2.91 0.00 2.24
2316 2556 1.301423 GAGGCTGAGTCGACGTATCT 58.699 55.000 10.46 5.60 0.00 1.98
2317 2557 1.003331 GAGGCTGAGTCGACGTATCTG 60.003 57.143 10.46 7.77 0.00 2.90
2318 2558 0.733729 GGCTGAGTCGACGTATCTGT 59.266 55.000 10.46 0.00 0.00 3.41
2319 2559 1.532090 GGCTGAGTCGACGTATCTGTG 60.532 57.143 10.46 0.00 0.00 3.66
2320 2560 1.532090 GCTGAGTCGACGTATCTGTGG 60.532 57.143 10.46 0.00 0.00 4.17
2321 2561 0.450583 TGAGTCGACGTATCTGTGGC 59.549 55.000 10.46 0.00 0.00 5.01
2322 2562 0.450583 GAGTCGACGTATCTGTGGCA 59.549 55.000 10.46 0.00 0.00 4.92
2323 2563 1.065701 GAGTCGACGTATCTGTGGCAT 59.934 52.381 10.46 0.00 0.00 4.40
2324 2564 1.476891 AGTCGACGTATCTGTGGCATT 59.523 47.619 10.46 0.00 0.00 3.56
2325 2565 1.852895 GTCGACGTATCTGTGGCATTC 59.147 52.381 0.00 0.00 0.00 2.67
2326 2566 1.749063 TCGACGTATCTGTGGCATTCT 59.251 47.619 0.00 0.00 0.00 2.40
2327 2567 1.854743 CGACGTATCTGTGGCATTCTG 59.145 52.381 0.00 0.00 0.00 3.02
2328 2568 2.735444 CGACGTATCTGTGGCATTCTGT 60.735 50.000 0.00 0.00 0.00 3.41
2329 2569 3.488553 CGACGTATCTGTGGCATTCTGTA 60.489 47.826 0.00 0.00 0.00 2.74
2330 2570 3.782046 ACGTATCTGTGGCATTCTGTAC 58.218 45.455 0.00 0.00 0.00 2.90
2331 2571 3.447586 ACGTATCTGTGGCATTCTGTACT 59.552 43.478 0.00 0.00 0.00 2.73
2332 2572 4.045104 CGTATCTGTGGCATTCTGTACTC 58.955 47.826 0.00 0.00 0.00 2.59
2333 2573 3.550437 ATCTGTGGCATTCTGTACTCC 57.450 47.619 0.00 0.00 0.00 3.85
2334 2574 1.555075 TCTGTGGCATTCTGTACTCCC 59.445 52.381 0.00 0.00 0.00 4.30
2335 2575 0.618458 TGTGGCATTCTGTACTCCCC 59.382 55.000 0.00 0.00 0.00 4.81
2336 2576 0.618458 GTGGCATTCTGTACTCCCCA 59.382 55.000 0.00 0.00 0.00 4.96
2337 2577 1.004277 GTGGCATTCTGTACTCCCCAA 59.996 52.381 0.00 0.00 0.00 4.12
2338 2578 1.707989 TGGCATTCTGTACTCCCCAAA 59.292 47.619 0.00 0.00 0.00 3.28
2339 2579 2.092323 GGCATTCTGTACTCCCCAAAC 58.908 52.381 0.00 0.00 0.00 2.93
2340 2580 2.092323 GCATTCTGTACTCCCCAAACC 58.908 52.381 0.00 0.00 0.00 3.27
2341 2581 2.290960 GCATTCTGTACTCCCCAAACCT 60.291 50.000 0.00 0.00 0.00 3.50
2342 2582 3.610911 CATTCTGTACTCCCCAAACCTC 58.389 50.000 0.00 0.00 0.00 3.85
2343 2583 1.652947 TCTGTACTCCCCAAACCTCC 58.347 55.000 0.00 0.00 0.00 4.30
2344 2584 0.618981 CTGTACTCCCCAAACCTCCC 59.381 60.000 0.00 0.00 0.00 4.30
2345 2585 0.104356 TGTACTCCCCAAACCTCCCA 60.104 55.000 0.00 0.00 0.00 4.37
2346 2586 0.327259 GTACTCCCCAAACCTCCCAC 59.673 60.000 0.00 0.00 0.00 4.61
2347 2587 0.104356 TACTCCCCAAACCTCCCACA 60.104 55.000 0.00 0.00 0.00 4.17
2348 2588 0.996762 ACTCCCCAAACCTCCCACAA 60.997 55.000 0.00 0.00 0.00 3.33
2349 2589 0.251341 CTCCCCAAACCTCCCACAAG 60.251 60.000 0.00 0.00 0.00 3.16
2350 2590 0.996762 TCCCCAAACCTCCCACAAGT 60.997 55.000 0.00 0.00 0.00 3.16
2351 2591 0.105709 CCCCAAACCTCCCACAAGTT 60.106 55.000 0.00 0.00 0.00 2.66
2352 2592 1.691163 CCCCAAACCTCCCACAAGTTT 60.691 52.381 0.00 0.00 34.13 2.66
2353 2593 2.425102 CCCCAAACCTCCCACAAGTTTA 60.425 50.000 0.00 0.00 32.64 2.01
2354 2594 3.506398 CCCAAACCTCCCACAAGTTTAT 58.494 45.455 0.00 0.00 32.64 1.40
2355 2595 3.258123 CCCAAACCTCCCACAAGTTTATG 59.742 47.826 0.00 0.00 32.64 1.90
2356 2596 3.895041 CCAAACCTCCCACAAGTTTATGT 59.105 43.478 0.00 0.00 32.64 2.29
2365 2605 3.701241 CACAAGTTTATGTGCCGTTTGT 58.299 40.909 0.00 0.00 43.67 2.83
2366 2606 3.485378 CACAAGTTTATGTGCCGTTTGTG 59.515 43.478 0.79 0.79 43.67 3.33
2367 2607 3.049206 CAAGTTTATGTGCCGTTTGTGG 58.951 45.455 0.00 0.00 0.00 4.17
2368 2608 1.611491 AGTTTATGTGCCGTTTGTGGG 59.389 47.619 0.00 0.00 0.00 4.61
2369 2609 1.609555 GTTTATGTGCCGTTTGTGGGA 59.390 47.619 0.00 0.00 0.00 4.37
2370 2610 2.208132 TTATGTGCCGTTTGTGGGAT 57.792 45.000 0.00 0.00 0.00 3.85
2371 2611 2.208132 TATGTGCCGTTTGTGGGATT 57.792 45.000 0.00 0.00 0.00 3.01
2372 2612 1.337118 ATGTGCCGTTTGTGGGATTT 58.663 45.000 0.00 0.00 0.00 2.17
2373 2613 1.115467 TGTGCCGTTTGTGGGATTTT 58.885 45.000 0.00 0.00 0.00 1.82
2374 2614 1.202463 TGTGCCGTTTGTGGGATTTTG 60.202 47.619 0.00 0.00 0.00 2.44
2375 2615 0.390860 TGCCGTTTGTGGGATTTTGG 59.609 50.000 0.00 0.00 0.00 3.28
2376 2616 0.676736 GCCGTTTGTGGGATTTTGGA 59.323 50.000 0.00 0.00 0.00 3.53
2377 2617 1.604438 GCCGTTTGTGGGATTTTGGAC 60.604 52.381 0.00 0.00 0.00 4.02
2378 2618 1.683917 CCGTTTGTGGGATTTTGGACA 59.316 47.619 0.00 0.00 0.00 4.02
2379 2619 2.298729 CCGTTTGTGGGATTTTGGACAT 59.701 45.455 0.00 0.00 0.00 3.06
2380 2620 3.574614 CGTTTGTGGGATTTTGGACATC 58.425 45.455 0.00 0.00 0.00 3.06
2381 2621 3.613910 CGTTTGTGGGATTTTGGACATCC 60.614 47.826 0.00 0.00 39.80 3.51
2382 2622 1.832883 TGTGGGATTTTGGACATCCG 58.167 50.000 0.00 0.00 41.26 4.18
2383 2623 1.352687 TGTGGGATTTTGGACATCCGA 59.647 47.619 0.00 0.00 41.26 4.55
2384 2624 2.224892 TGTGGGATTTTGGACATCCGAA 60.225 45.455 0.00 0.00 41.26 4.30
2385 2625 2.163613 GTGGGATTTTGGACATCCGAAC 59.836 50.000 0.00 0.00 41.26 3.95
2386 2626 1.400494 GGGATTTTGGACATCCGAACG 59.600 52.381 0.00 0.00 41.26 3.95
2387 2627 1.400494 GGATTTTGGACATCCGAACGG 59.600 52.381 6.94 6.94 39.06 4.44
2398 2638 2.083167 TCCGAACGGATTTGGTACAC 57.917 50.000 12.04 0.00 40.07 2.90
2399 2639 0.717224 CCGAACGGATTTGGTACACG 59.283 55.000 7.53 0.00 35.69 4.49
2400 2640 0.717224 CGAACGGATTTGGTACACGG 59.283 55.000 0.00 0.00 39.29 4.94
2401 2641 0.445043 GAACGGATTTGGTACACGGC 59.555 55.000 0.00 0.00 39.29 5.68
2402 2642 1.293267 AACGGATTTGGTACACGGCG 61.293 55.000 4.80 4.80 39.29 6.46
2403 2643 1.738830 CGGATTTGGTACACGGCGT 60.739 57.895 6.77 6.77 39.29 5.68
2404 2644 1.293267 CGGATTTGGTACACGGCGTT 61.293 55.000 11.19 4.75 39.29 4.84
2405 2645 0.167251 GGATTTGGTACACGGCGTTG 59.833 55.000 11.19 8.99 39.29 4.10
2406 2646 0.167251 GATTTGGTACACGGCGTTGG 59.833 55.000 11.19 1.91 39.29 3.77
2407 2647 0.250381 ATTTGGTACACGGCGTTGGA 60.250 50.000 11.19 0.00 39.29 3.53
2408 2648 0.250381 TTTGGTACACGGCGTTGGAT 60.250 50.000 11.19 0.00 39.29 3.41
2409 2649 0.951525 TTGGTACACGGCGTTGGATG 60.952 55.000 11.19 0.15 39.29 3.51
2410 2650 2.104253 GGTACACGGCGTTGGATGG 61.104 63.158 11.19 0.00 0.00 3.51
2411 2651 1.375013 GTACACGGCGTTGGATGGT 60.375 57.895 11.19 6.75 0.00 3.55
2412 2652 1.374885 TACACGGCGTTGGATGGTG 60.375 57.895 11.19 0.00 34.87 4.17
2413 2653 1.817911 TACACGGCGTTGGATGGTGA 61.818 55.000 11.19 0.00 33.08 4.02
2414 2654 1.963855 CACGGCGTTGGATGGTGAA 60.964 57.895 11.19 0.00 0.00 3.18
2415 2655 1.228003 ACGGCGTTGGATGGTGAAA 60.228 52.632 6.77 0.00 0.00 2.69
2416 2656 0.820074 ACGGCGTTGGATGGTGAAAA 60.820 50.000 6.77 0.00 0.00 2.29
2417 2657 0.109781 CGGCGTTGGATGGTGAAAAG 60.110 55.000 0.00 0.00 0.00 2.27
2418 2658 0.958822 GGCGTTGGATGGTGAAAAGT 59.041 50.000 0.00 0.00 0.00 2.66
2419 2659 1.335872 GGCGTTGGATGGTGAAAAGTG 60.336 52.381 0.00 0.00 0.00 3.16
2420 2660 1.336755 GCGTTGGATGGTGAAAAGTGT 59.663 47.619 0.00 0.00 0.00 3.55
2421 2661 2.858260 GCGTTGGATGGTGAAAAGTGTG 60.858 50.000 0.00 0.00 0.00 3.82
2422 2662 2.357637 CGTTGGATGGTGAAAAGTGTGT 59.642 45.455 0.00 0.00 0.00 3.72
2423 2663 3.705604 GTTGGATGGTGAAAAGTGTGTG 58.294 45.455 0.00 0.00 0.00 3.82
2424 2664 2.305928 TGGATGGTGAAAAGTGTGTGG 58.694 47.619 0.00 0.00 0.00 4.17
2425 2665 2.306847 GGATGGTGAAAAGTGTGTGGT 58.693 47.619 0.00 0.00 0.00 4.16
2426 2666 2.293399 GGATGGTGAAAAGTGTGTGGTC 59.707 50.000 0.00 0.00 0.00 4.02
2427 2667 1.757682 TGGTGAAAAGTGTGTGGTCC 58.242 50.000 0.00 0.00 0.00 4.46
2428 2668 1.004862 TGGTGAAAAGTGTGTGGTCCA 59.995 47.619 0.00 0.00 0.00 4.02
2429 2669 1.404035 GGTGAAAAGTGTGTGGTCCAC 59.596 52.381 15.64 15.64 44.78 4.02
2439 2679 3.862991 TGGTCCACGCGGTCCAAA 61.863 61.111 12.47 0.00 46.10 3.28
2440 2680 3.351416 GGTCCACGCGGTCCAAAC 61.351 66.667 12.47 0.00 40.04 2.93
2441 2681 2.589442 GTCCACGCGGTCCAAACA 60.589 61.111 12.47 0.00 0.00 2.83
2442 2682 1.964373 GTCCACGCGGTCCAAACAT 60.964 57.895 12.47 0.00 0.00 2.71
2443 2683 1.228003 TCCACGCGGTCCAAACATT 60.228 52.632 12.47 0.00 0.00 2.71
2444 2684 0.820074 TCCACGCGGTCCAAACATTT 60.820 50.000 12.47 0.00 0.00 2.32
2445 2685 0.662970 CCACGCGGTCCAAACATTTG 60.663 55.000 12.47 0.00 37.90 2.32
2458 2698 5.886960 CAAACATTTGGGGTTGTTTCAAA 57.113 34.783 0.00 0.00 42.52 2.69
2459 2699 5.878133 CAAACATTTGGGGTTGTTTCAAAG 58.122 37.500 0.00 0.00 42.52 2.77
2460 2700 5.428184 AACATTTGGGGTTGTTTCAAAGA 57.572 34.783 0.00 0.00 32.28 2.52
2461 2701 5.428184 ACATTTGGGGTTGTTTCAAAGAA 57.572 34.783 0.00 0.00 34.47 2.52
2462 2702 5.182487 ACATTTGGGGTTGTTTCAAAGAAC 58.818 37.500 1.43 1.43 34.47 3.01
2467 2707 3.497297 GGTTGTTTCAAAGAACCGTGT 57.503 42.857 13.12 0.00 43.71 4.49
2468 2708 3.840468 GGTTGTTTCAAAGAACCGTGTT 58.160 40.909 13.12 0.00 43.71 3.32
2469 2709 3.610677 GGTTGTTTCAAAGAACCGTGTTG 59.389 43.478 13.12 0.00 43.71 3.33
2470 2710 4.477780 GTTGTTTCAAAGAACCGTGTTGA 58.522 39.130 0.00 0.00 0.00 3.18
2471 2711 4.768130 TGTTTCAAAGAACCGTGTTGAA 57.232 36.364 0.00 0.00 39.00 2.69
2472 2712 4.728534 TGTTTCAAAGAACCGTGTTGAAG 58.271 39.130 0.00 0.00 41.06 3.02
2473 2713 4.216687 TGTTTCAAAGAACCGTGTTGAAGT 59.783 37.500 0.00 0.00 41.06 3.01
2474 2714 5.158494 GTTTCAAAGAACCGTGTTGAAGTT 58.842 37.500 0.00 0.00 41.06 2.66
2475 2715 4.349663 TCAAAGAACCGTGTTGAAGTTG 57.650 40.909 0.00 0.00 0.00 3.16
2476 2716 2.844122 AAGAACCGTGTTGAAGTTGC 57.156 45.000 0.00 0.00 0.00 4.17
2477 2717 1.021968 AGAACCGTGTTGAAGTTGCC 58.978 50.000 0.00 0.00 0.00 4.52
2478 2718 0.030235 GAACCGTGTTGAAGTTGCCC 59.970 55.000 0.00 0.00 0.00 5.36
2479 2719 0.395173 AACCGTGTTGAAGTTGCCCT 60.395 50.000 0.00 0.00 0.00 5.19
2480 2720 1.101049 ACCGTGTTGAAGTTGCCCTG 61.101 55.000 0.00 0.00 0.00 4.45
2481 2721 0.817634 CCGTGTTGAAGTTGCCCTGA 60.818 55.000 0.00 0.00 0.00 3.86
2482 2722 0.307760 CGTGTTGAAGTTGCCCTGAC 59.692 55.000 0.00 0.00 0.00 3.51
2483 2723 0.307760 GTGTTGAAGTTGCCCTGACG 59.692 55.000 0.00 0.00 0.00 4.35
2484 2724 0.107410 TGTTGAAGTTGCCCTGACGT 60.107 50.000 0.00 0.00 0.00 4.34
2485 2725 0.586802 GTTGAAGTTGCCCTGACGTC 59.413 55.000 9.11 9.11 0.00 4.34
2486 2726 0.534203 TTGAAGTTGCCCTGACGTCC 60.534 55.000 14.12 0.00 0.00 4.79
2487 2727 1.671379 GAAGTTGCCCTGACGTCCC 60.671 63.158 14.12 0.00 0.00 4.46
2488 2728 2.113243 GAAGTTGCCCTGACGTCCCT 62.113 60.000 14.12 0.00 0.00 4.20
2489 2729 0.834687 AAGTTGCCCTGACGTCCCTA 60.835 55.000 14.12 0.00 0.00 3.53
2490 2730 1.218316 GTTGCCCTGACGTCCCTAG 59.782 63.158 14.12 3.56 0.00 3.02
2491 2731 1.229082 TTGCCCTGACGTCCCTAGT 60.229 57.895 14.12 0.00 0.00 2.57
2492 2732 0.040058 TTGCCCTGACGTCCCTAGTA 59.960 55.000 14.12 0.00 0.00 1.82
2493 2733 0.040058 TGCCCTGACGTCCCTAGTAA 59.960 55.000 14.12 0.00 0.00 2.24
2494 2734 1.188863 GCCCTGACGTCCCTAGTAAA 58.811 55.000 14.12 0.00 0.00 2.01
2495 2735 1.551883 GCCCTGACGTCCCTAGTAAAA 59.448 52.381 14.12 0.00 0.00 1.52
2496 2736 2.027837 GCCCTGACGTCCCTAGTAAAAA 60.028 50.000 14.12 0.00 0.00 1.94
2557 2797 9.660180 TTACCATTTATTTAGGGTCAATTTTGC 57.340 29.630 0.00 0.00 34.88 3.68
2558 2798 7.684529 ACCATTTATTTAGGGTCAATTTTGCA 58.315 30.769 0.00 0.00 0.00 4.08
2559 2799 7.606073 ACCATTTATTTAGGGTCAATTTTGCAC 59.394 33.333 0.00 0.00 0.00 4.57
2560 2800 7.605691 CCATTTATTTAGGGTCAATTTTGCACA 59.394 33.333 0.00 0.00 0.00 4.57
2561 2801 8.658609 CATTTATTTAGGGTCAATTTTGCACAG 58.341 33.333 0.00 0.00 0.00 3.66
2562 2802 7.531857 TTATTTAGGGTCAATTTTGCACAGA 57.468 32.000 0.00 0.00 0.00 3.41
2563 2803 5.860941 TTTAGGGTCAATTTTGCACAGAA 57.139 34.783 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.079888 CCAGTTGCGCAAAATCCCC 60.080 57.895 26.87 11.46 0.00 4.81
256 261 1.471676 GGAGGAGGTTGCGTGTGATAG 60.472 57.143 0.00 0.00 0.00 2.08
257 262 0.535335 GGAGGAGGTTGCGTGTGATA 59.465 55.000 0.00 0.00 0.00 2.15
334 343 7.028361 GCTTGACTTGTAGTAGTAATTCGACT 58.972 38.462 0.00 0.00 36.13 4.18
337 346 7.813852 AAGCTTGACTTGTAGTAGTAATTCG 57.186 36.000 0.00 0.00 37.17 3.34
407 418 1.209504 TCAGGCTGATACTTTTCGGGG 59.790 52.381 14.43 0.00 0.00 5.73
486 544 5.703130 GGACTAGAGCACTGAAATGTCTTTT 59.297 40.000 0.00 0.00 0.00 2.27
488 546 4.530161 AGGACTAGAGCACTGAAATGTCTT 59.470 41.667 0.00 0.00 0.00 3.01
490 548 4.464069 AGGACTAGAGCACTGAAATGTC 57.536 45.455 0.00 0.00 0.00 3.06
498 558 9.771534 GAAAAATCATTATAGGACTAGAGCACT 57.228 33.333 0.00 0.00 0.00 4.40
499 559 9.547753 TGAAAAATCATTATAGGACTAGAGCAC 57.452 33.333 0.00 0.00 0.00 4.40
537 597 8.857216 CGTTACGACTCAATAAGACTTACATTT 58.143 33.333 0.00 0.00 0.00 2.32
538 598 8.025445 ACGTTACGACTCAATAAGACTTACATT 58.975 33.333 13.03 0.00 0.00 2.71
539 599 7.533426 ACGTTACGACTCAATAAGACTTACAT 58.467 34.615 13.03 0.00 0.00 2.29
540 600 6.902341 ACGTTACGACTCAATAAGACTTACA 58.098 36.000 13.03 0.00 0.00 2.41
541 601 6.191775 CGACGTTACGACTCAATAAGACTTAC 59.808 42.308 13.03 0.00 35.09 2.34
542 602 6.243551 CGACGTTACGACTCAATAAGACTTA 58.756 40.000 13.03 0.00 35.09 2.24
543 603 5.084722 CGACGTTACGACTCAATAAGACTT 58.915 41.667 13.03 0.00 35.09 3.01
544 604 4.645956 CGACGTTACGACTCAATAAGACT 58.354 43.478 13.03 0.00 35.09 3.24
545 605 3.236980 GCGACGTTACGACTCAATAAGAC 59.763 47.826 13.03 0.00 35.09 3.01
546 606 3.120234 TGCGACGTTACGACTCAATAAGA 60.120 43.478 13.03 0.00 35.09 2.10
547 607 3.165890 TGCGACGTTACGACTCAATAAG 58.834 45.455 13.03 0.00 35.09 1.73
548 608 3.200294 TGCGACGTTACGACTCAATAA 57.800 42.857 13.03 0.00 35.09 1.40
549 609 2.898181 TGCGACGTTACGACTCAATA 57.102 45.000 13.03 0.00 35.09 1.90
550 610 2.182825 GATGCGACGTTACGACTCAAT 58.817 47.619 13.03 0.00 35.09 2.57
558 618 0.108520 TCCCCTTGATGCGACGTTAC 60.109 55.000 0.00 0.00 0.00 2.50
562 622 0.104120 TGTATCCCCTTGATGCGACG 59.896 55.000 0.00 0.00 38.78 5.12
575 635 2.726760 CGAACTCGCTATGCTTGTATCC 59.273 50.000 0.00 0.00 0.00 2.59
601 742 1.092348 TGTCAGACGGGTACTGATCG 58.908 55.000 0.00 0.00 44.41 3.69
610 751 0.038159 GAGAACTGGTGTCAGACGGG 60.038 60.000 0.00 0.00 43.49 5.28
611 752 0.962489 AGAGAACTGGTGTCAGACGG 59.038 55.000 0.00 0.00 43.49 4.79
613 754 2.625790 ACAGAGAGAACTGGTGTCAGAC 59.374 50.000 0.00 0.00 43.49 3.51
671 812 0.661020 GTGTGCCTTGCGTACTGTTT 59.339 50.000 0.00 0.00 0.00 2.83
703 844 4.156455 ACTTGTGCCAAGAGAAAGAAGA 57.844 40.909 18.22 0.00 0.00 2.87
704 845 4.907879 AACTTGTGCCAAGAGAAAGAAG 57.092 40.909 18.22 0.00 0.00 2.85
705 846 6.767524 TTAAACTTGTGCCAAGAGAAAGAA 57.232 33.333 18.22 4.63 0.00 2.52
706 847 6.239008 CCATTAAACTTGTGCCAAGAGAAAGA 60.239 38.462 18.22 3.73 0.00 2.52
707 848 5.922544 CCATTAAACTTGTGCCAAGAGAAAG 59.077 40.000 18.22 8.26 0.00 2.62
711 852 3.005684 TGCCATTAAACTTGTGCCAAGAG 59.994 43.478 18.22 0.00 0.00 2.85
730 872 2.939103 CACCAGCTACTTGAATAGTGCC 59.061 50.000 0.00 0.00 37.73 5.01
781 923 0.179076 TGCGCATGATGTACAGGAGG 60.179 55.000 5.66 0.00 31.36 4.30
793 935 1.645455 CCGGAGAAGAATGCGCATG 59.355 57.895 26.09 8.46 32.04 4.06
980 1122 1.396648 TCGTCGCCGTAGTCGAAATTA 59.603 47.619 0.00 0.00 41.80 1.40
1215 1357 2.675423 TGCGCCTCGTAGGTCACT 60.675 61.111 4.18 0.00 37.80 3.41
1422 1567 2.734591 GACTGGTGGTCGTGCTGA 59.265 61.111 0.00 0.00 35.07 4.26
1567 1712 4.272018 GGAACGAGTGAATCAATCATCTGG 59.728 45.833 11.33 0.00 40.97 3.86
1618 1766 4.021719 AGGAGAAACTTTTCATGGCACATG 60.022 41.667 8.41 8.41 39.61 3.21
1623 1772 3.742882 GCAAAGGAGAAACTTTTCATGGC 59.257 43.478 4.58 0.00 38.56 4.40
1698 1851 4.488126 AACAACACAAGACCGATTGATG 57.512 40.909 2.59 0.00 34.20 3.07
1702 1855 2.360801 CCCAAACAACACAAGACCGATT 59.639 45.455 0.00 0.00 0.00 3.34
1868 2021 3.508793 CCTCAAGCAAAACATGTCTGGAT 59.491 43.478 0.00 0.00 0.00 3.41
1952 2150 3.946126 GAAGCCCAAGGAGCACCCC 62.946 68.421 0.00 0.00 36.73 4.95
1955 2153 1.203287 GAAATGAAGCCCAAGGAGCAC 59.797 52.381 0.00 0.00 0.00 4.40
1956 2154 1.076024 AGAAATGAAGCCCAAGGAGCA 59.924 47.619 0.00 0.00 0.00 4.26
1957 2155 1.475682 CAGAAATGAAGCCCAAGGAGC 59.524 52.381 0.00 0.00 0.00 4.70
1958 2156 1.475682 GCAGAAATGAAGCCCAAGGAG 59.524 52.381 0.00 0.00 0.00 3.69
1959 2157 1.549203 GCAGAAATGAAGCCCAAGGA 58.451 50.000 0.00 0.00 0.00 3.36
1960 2158 0.533951 GGCAGAAATGAAGCCCAAGG 59.466 55.000 0.00 0.00 42.58 3.61
1992 2199 3.952323 CCTCTTCATGAATGTTGCTGGAT 59.048 43.478 8.96 0.00 0.00 3.41
2005 2212 2.366916 AGGCCGACTATTCCTCTTCATG 59.633 50.000 0.00 0.00 0.00 3.07
2017 2225 0.901114 TTACTGTGCCAGGCCGACTA 60.901 55.000 9.64 0.00 35.51 2.59
2022 2230 0.036875 AGAGTTTACTGTGCCAGGCC 59.963 55.000 9.64 0.00 35.51 5.19
2027 2235 5.298347 ACAAAGAGTAGAGTTTACTGTGCC 58.702 41.667 0.00 0.00 0.00 5.01
2029 2237 7.382759 GGAGAACAAAGAGTAGAGTTTACTGTG 59.617 40.741 0.00 0.00 0.00 3.66
2030 2238 7.288158 AGGAGAACAAAGAGTAGAGTTTACTGT 59.712 37.037 0.00 0.00 0.00 3.55
2076 2316 9.751542 CTCCGTCTCATAATATAAGAGTGTTTT 57.248 33.333 0.00 0.00 0.00 2.43
2077 2317 8.361139 CCTCCGTCTCATAATATAAGAGTGTTT 58.639 37.037 0.00 0.00 0.00 2.83
2078 2318 7.039644 CCCTCCGTCTCATAATATAAGAGTGTT 60.040 40.741 0.00 0.00 0.00 3.32
2079 2319 6.434652 CCCTCCGTCTCATAATATAAGAGTGT 59.565 42.308 0.00 0.00 0.00 3.55
2080 2320 6.659668 TCCCTCCGTCTCATAATATAAGAGTG 59.340 42.308 0.00 0.00 0.00 3.51
2081 2321 6.791371 TCCCTCCGTCTCATAATATAAGAGT 58.209 40.000 0.00 0.00 0.00 3.24
2082 2322 6.887545 ACTCCCTCCGTCTCATAATATAAGAG 59.112 42.308 0.00 0.00 0.00 2.85
2083 2323 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
2084 2324 7.067251 GGTACTCCCTCCGTCTCATAATATAAG 59.933 44.444 0.00 0.00 0.00 1.73
2085 2325 6.888632 GGTACTCCCTCCGTCTCATAATATAA 59.111 42.308 0.00 0.00 0.00 0.98
2086 2326 6.217074 AGGTACTCCCTCCGTCTCATAATATA 59.783 42.308 0.00 0.00 40.71 0.86
2087 2327 5.015391 AGGTACTCCCTCCGTCTCATAATAT 59.985 44.000 0.00 0.00 40.71 1.28
2088 2328 4.353191 AGGTACTCCCTCCGTCTCATAATA 59.647 45.833 0.00 0.00 40.71 0.98
2089 2329 3.140519 AGGTACTCCCTCCGTCTCATAAT 59.859 47.826 0.00 0.00 40.71 1.28
2090 2330 2.512896 AGGTACTCCCTCCGTCTCATAA 59.487 50.000 0.00 0.00 40.71 1.90
2091 2331 2.133520 AGGTACTCCCTCCGTCTCATA 58.866 52.381 0.00 0.00 40.71 2.15
2092 2332 0.927767 AGGTACTCCCTCCGTCTCAT 59.072 55.000 0.00 0.00 40.71 2.90
2093 2333 2.395613 AGGTACTCCCTCCGTCTCA 58.604 57.895 0.00 0.00 40.71 3.27
2105 2345 3.760787 TGGAGTTGCCCTTAAGAGGTACT 60.761 47.826 3.36 10.72 41.85 2.73
2106 2346 2.570302 TGGAGTTGCCCTTAAGAGGTAC 59.430 50.000 3.36 6.65 41.85 3.34
2107 2347 2.910544 TGGAGTTGCCCTTAAGAGGTA 58.089 47.619 3.36 0.23 41.85 3.08
2108 2348 1.742308 TGGAGTTGCCCTTAAGAGGT 58.258 50.000 3.36 0.00 41.85 3.85
2109 2349 2.437413 GTTGGAGTTGCCCTTAAGAGG 58.563 52.381 3.36 4.85 43.15 3.69
2110 2350 2.076863 CGTTGGAGTTGCCCTTAAGAG 58.923 52.381 3.36 0.00 34.97 2.85
2111 2351 1.271163 CCGTTGGAGTTGCCCTTAAGA 60.271 52.381 3.36 0.00 34.97 2.10
2112 2352 1.165270 CCGTTGGAGTTGCCCTTAAG 58.835 55.000 0.00 0.00 34.97 1.85
2113 2353 0.250989 CCCGTTGGAGTTGCCCTTAA 60.251 55.000 0.00 0.00 34.97 1.85
2114 2354 1.377229 CCCGTTGGAGTTGCCCTTA 59.623 57.895 0.00 0.00 34.97 2.69
2115 2355 2.115266 CCCGTTGGAGTTGCCCTT 59.885 61.111 0.00 0.00 34.97 3.95
2116 2356 2.692273 GAACCCGTTGGAGTTGCCCT 62.692 60.000 0.00 0.00 34.97 5.19
2117 2357 2.203437 AACCCGTTGGAGTTGCCC 60.203 61.111 0.00 0.00 34.97 5.36
2118 2358 1.527380 TGAACCCGTTGGAGTTGCC 60.527 57.895 0.00 0.00 34.81 4.52
2119 2359 1.652563 GTGAACCCGTTGGAGTTGC 59.347 57.895 0.00 0.00 34.81 4.17
2120 2360 1.503818 CCGTGAACCCGTTGGAGTTG 61.504 60.000 0.00 0.00 34.81 3.16
2121 2361 1.227734 CCGTGAACCCGTTGGAGTT 60.228 57.895 0.00 0.00 34.81 3.01
2122 2362 1.688269 TTCCGTGAACCCGTTGGAGT 61.688 55.000 0.00 0.00 34.81 3.85
2123 2363 1.070105 TTCCGTGAACCCGTTGGAG 59.930 57.895 0.00 0.00 34.81 3.86
2124 2364 1.227615 GTTCCGTGAACCCGTTGGA 60.228 57.895 5.71 0.00 36.65 3.53
2125 2365 2.600475 CGTTCCGTGAACCCGTTGG 61.600 63.158 10.07 0.00 39.14 3.77
2126 2366 2.600475 CCGTTCCGTGAACCCGTTG 61.600 63.158 10.07 0.00 39.14 4.10
2127 2367 2.103339 ATCCGTTCCGTGAACCCGTT 62.103 55.000 10.07 0.00 39.14 4.44
2128 2368 1.250154 TATCCGTTCCGTGAACCCGT 61.250 55.000 10.07 1.57 39.14 5.28
2129 2369 0.526954 CTATCCGTTCCGTGAACCCG 60.527 60.000 10.07 1.97 39.14 5.28
2130 2370 0.808847 GCTATCCGTTCCGTGAACCC 60.809 60.000 10.07 0.00 39.14 4.11
2131 2371 0.108520 TGCTATCCGTTCCGTGAACC 60.109 55.000 10.07 0.00 39.14 3.62
2132 2372 1.859080 GATGCTATCCGTTCCGTGAAC 59.141 52.381 6.68 6.68 38.97 3.18
2133 2373 1.478916 TGATGCTATCCGTTCCGTGAA 59.521 47.619 0.00 0.00 0.00 3.18
2134 2374 1.107945 TGATGCTATCCGTTCCGTGA 58.892 50.000 0.00 0.00 0.00 4.35
2135 2375 1.860950 CTTGATGCTATCCGTTCCGTG 59.139 52.381 0.00 0.00 0.00 4.94
2136 2376 1.480954 ACTTGATGCTATCCGTTCCGT 59.519 47.619 0.00 0.00 0.00 4.69
2137 2377 2.128035 GACTTGATGCTATCCGTTCCG 58.872 52.381 0.00 0.00 0.00 4.30
2138 2378 2.158957 TGGACTTGATGCTATCCGTTCC 60.159 50.000 0.00 0.00 33.63 3.62
2139 2379 3.179443 TGGACTTGATGCTATCCGTTC 57.821 47.619 0.00 0.00 33.63 3.95
2140 2380 3.845781 ATGGACTTGATGCTATCCGTT 57.154 42.857 0.00 0.00 33.63 4.44
2141 2381 4.955811 TTATGGACTTGATGCTATCCGT 57.044 40.909 0.00 0.00 33.63 4.69
2142 2382 5.050091 GTGTTTATGGACTTGATGCTATCCG 60.050 44.000 0.00 0.00 33.63 4.18
2143 2383 5.050091 CGTGTTTATGGACTTGATGCTATCC 60.050 44.000 0.00 0.00 0.00 2.59
2144 2384 5.523916 ACGTGTTTATGGACTTGATGCTATC 59.476 40.000 0.00 0.00 0.00 2.08
2145 2385 5.428253 ACGTGTTTATGGACTTGATGCTAT 58.572 37.500 0.00 0.00 0.00 2.97
2146 2386 4.827692 ACGTGTTTATGGACTTGATGCTA 58.172 39.130 0.00 0.00 0.00 3.49
2147 2387 3.674997 ACGTGTTTATGGACTTGATGCT 58.325 40.909 0.00 0.00 0.00 3.79
2148 2388 3.181510 GGACGTGTTTATGGACTTGATGC 60.182 47.826 0.00 0.00 0.00 3.91
2149 2389 4.000325 TGGACGTGTTTATGGACTTGATG 59.000 43.478 0.00 0.00 0.00 3.07
2150 2390 4.280436 TGGACGTGTTTATGGACTTGAT 57.720 40.909 0.00 0.00 0.00 2.57
2151 2391 3.755112 TGGACGTGTTTATGGACTTGA 57.245 42.857 0.00 0.00 0.00 3.02
2152 2392 4.822036 TTTGGACGTGTTTATGGACTTG 57.178 40.909 0.00 0.00 0.00 3.16
2153 2393 4.825085 ACATTTGGACGTGTTTATGGACTT 59.175 37.500 0.00 0.00 0.00 3.01
2154 2394 4.215399 CACATTTGGACGTGTTTATGGACT 59.785 41.667 0.00 0.00 0.00 3.85
2155 2395 4.023536 ACACATTTGGACGTGTTTATGGAC 60.024 41.667 0.00 0.00 43.71 4.02
2156 2396 4.138290 ACACATTTGGACGTGTTTATGGA 58.862 39.130 0.00 0.00 43.71 3.41
2157 2397 4.497473 ACACATTTGGACGTGTTTATGG 57.503 40.909 0.00 0.00 43.71 2.74
2164 2404 2.017357 CACGAACACATTTGGACGTG 57.983 50.000 14.75 14.75 43.87 4.49
2165 2405 0.306533 GCACGAACACATTTGGACGT 59.693 50.000 0.00 0.00 38.49 4.34
2166 2406 0.306228 TGCACGAACACATTTGGACG 59.694 50.000 0.00 0.00 0.00 4.79
2167 2407 1.064803 TGTGCACGAACACATTTGGAC 59.935 47.619 13.13 0.00 45.36 4.02
2168 2408 1.383523 TGTGCACGAACACATTTGGA 58.616 45.000 13.13 0.00 45.36 3.53
2169 2409 3.934521 TGTGCACGAACACATTTGG 57.065 47.368 13.13 0.00 45.36 3.28
2175 2415 1.952133 TACCGCTGTGCACGAACAC 60.952 57.895 13.13 5.76 41.10 3.32
2176 2416 1.952133 GTACCGCTGTGCACGAACA 60.952 57.895 13.13 0.00 0.00 3.18
2177 2417 2.851104 GTACCGCTGTGCACGAAC 59.149 61.111 13.13 2.77 0.00 3.95
2178 2418 2.731721 CGTACCGCTGTGCACGAA 60.732 61.111 13.13 0.00 36.53 3.85
2179 2419 3.604494 CTCGTACCGCTGTGCACGA 62.604 63.158 13.13 13.20 40.78 4.35
2180 2420 3.172575 CTCGTACCGCTGTGCACG 61.173 66.667 13.13 8.32 35.78 5.34
2181 2421 1.801913 CTCTCGTACCGCTGTGCAC 60.802 63.158 10.75 10.75 0.00 4.57
2182 2422 2.566529 CTCTCGTACCGCTGTGCA 59.433 61.111 0.00 0.00 0.00 4.57
2183 2423 2.881352 GCTCTCGTACCGCTGTGC 60.881 66.667 0.00 0.00 0.00 4.57
2184 2424 2.202623 GGCTCTCGTACCGCTGTG 60.203 66.667 0.00 0.00 0.00 3.66
2185 2425 3.812019 CGGCTCTCGTACCGCTGT 61.812 66.667 0.00 0.00 43.44 4.40
2190 2430 1.359475 GATGGTCGGCTCTCGTACC 59.641 63.158 0.00 0.00 40.32 3.34
2191 2431 1.359475 GGATGGTCGGCTCTCGTAC 59.641 63.158 0.00 0.00 40.32 3.67
2192 2432 2.184830 CGGATGGTCGGCTCTCGTA 61.185 63.158 0.00 0.00 40.32 3.43
2193 2433 3.518998 CGGATGGTCGGCTCTCGT 61.519 66.667 0.00 0.00 40.32 4.18
2194 2434 3.209812 TCGGATGGTCGGCTCTCG 61.210 66.667 0.00 0.00 40.90 4.04
2195 2435 2.413765 GTCGGATGGTCGGCTCTC 59.586 66.667 0.00 0.00 0.00 3.20
2196 2436 3.148279 GGTCGGATGGTCGGCTCT 61.148 66.667 0.00 0.00 34.85 4.09
2197 2437 1.461091 TATGGTCGGATGGTCGGCTC 61.461 60.000 0.00 0.00 34.85 4.70
2198 2438 0.832135 ATATGGTCGGATGGTCGGCT 60.832 55.000 0.00 0.00 34.85 5.52
2199 2439 0.389948 GATATGGTCGGATGGTCGGC 60.390 60.000 0.00 0.00 0.00 5.54
2200 2440 0.246635 GGATATGGTCGGATGGTCGG 59.753 60.000 0.00 0.00 0.00 4.79
2201 2441 0.966179 TGGATATGGTCGGATGGTCG 59.034 55.000 0.00 0.00 0.00 4.79
2202 2442 2.567169 TGATGGATATGGTCGGATGGTC 59.433 50.000 0.00 0.00 0.00 4.02
2203 2443 2.619931 TGATGGATATGGTCGGATGGT 58.380 47.619 0.00 0.00 0.00 3.55
2204 2444 3.701205 TTGATGGATATGGTCGGATGG 57.299 47.619 0.00 0.00 0.00 3.51
2205 2445 5.005740 ACATTTGATGGATATGGTCGGATG 58.994 41.667 0.00 0.00 33.60 3.51
2206 2446 5.246981 ACATTTGATGGATATGGTCGGAT 57.753 39.130 0.00 0.00 33.60 4.18
2207 2447 4.705110 ACATTTGATGGATATGGTCGGA 57.295 40.909 0.00 0.00 33.60 4.55
2208 2448 5.362556 GAACATTTGATGGATATGGTCGG 57.637 43.478 0.00 0.00 33.60 4.79
2210 2450 4.516698 AGCGAACATTTGATGGATATGGTC 59.483 41.667 0.00 0.00 33.64 4.02
2211 2451 4.464008 AGCGAACATTTGATGGATATGGT 58.536 39.130 0.00 0.00 33.60 3.55
2212 2452 4.758674 AGAGCGAACATTTGATGGATATGG 59.241 41.667 0.00 0.00 33.60 2.74
2213 2453 5.936686 AGAGCGAACATTTGATGGATATG 57.063 39.130 0.00 0.00 33.60 1.78
2214 2454 6.319658 ACAAAGAGCGAACATTTGATGGATAT 59.680 34.615 4.08 0.00 37.37 1.63
2215 2455 5.647658 ACAAAGAGCGAACATTTGATGGATA 59.352 36.000 4.08 0.00 37.37 2.59
2216 2456 4.460382 ACAAAGAGCGAACATTTGATGGAT 59.540 37.500 4.08 0.00 37.37 3.41
2217 2457 3.820467 ACAAAGAGCGAACATTTGATGGA 59.180 39.130 4.08 0.00 37.37 3.41
2218 2458 4.161333 GACAAAGAGCGAACATTTGATGG 58.839 43.478 4.08 0.00 37.37 3.51
2219 2459 4.161333 GGACAAAGAGCGAACATTTGATG 58.839 43.478 4.08 0.00 37.37 3.07
2220 2460 3.820467 TGGACAAAGAGCGAACATTTGAT 59.180 39.130 4.08 0.00 37.37 2.57
2221 2461 3.210227 TGGACAAAGAGCGAACATTTGA 58.790 40.909 4.08 0.00 37.37 2.69
2222 2462 3.624326 TGGACAAAGAGCGAACATTTG 57.376 42.857 0.00 0.00 39.32 2.32
2223 2463 4.853924 ATTGGACAAAGAGCGAACATTT 57.146 36.364 0.00 0.00 0.00 2.32
2224 2464 5.957842 TTATTGGACAAAGAGCGAACATT 57.042 34.783 0.00 0.00 0.00 2.71
2225 2465 5.957842 TTTATTGGACAAAGAGCGAACAT 57.042 34.783 0.00 0.00 0.00 2.71
2226 2466 5.759506 TTTTATTGGACAAAGAGCGAACA 57.240 34.783 0.00 0.00 0.00 3.18
2227 2467 6.435428 TCTTTTTATTGGACAAAGAGCGAAC 58.565 36.000 0.00 0.00 32.72 3.95
2228 2468 6.627395 TCTTTTTATTGGACAAAGAGCGAA 57.373 33.333 0.00 0.00 32.72 4.70
2229 2469 6.349280 CCATCTTTTTATTGGACAAAGAGCGA 60.349 38.462 0.00 0.00 39.34 4.93
2230 2470 5.801947 CCATCTTTTTATTGGACAAAGAGCG 59.198 40.000 0.00 0.00 39.34 5.03
2231 2471 6.071391 TCCCATCTTTTTATTGGACAAAGAGC 60.071 38.462 0.00 0.00 39.34 4.09
2232 2472 7.394359 TCTCCCATCTTTTTATTGGACAAAGAG 59.606 37.037 0.00 0.00 39.34 2.85
2233 2473 7.237982 TCTCCCATCTTTTTATTGGACAAAGA 58.762 34.615 0.00 0.00 40.07 2.52
2234 2474 7.394359 TCTCTCCCATCTTTTTATTGGACAAAG 59.606 37.037 0.00 0.00 31.94 2.77
2235 2475 7.237982 TCTCTCCCATCTTTTTATTGGACAAA 58.762 34.615 0.00 0.00 31.94 2.83
2236 2476 6.789268 TCTCTCCCATCTTTTTATTGGACAA 58.211 36.000 0.00 0.00 31.94 3.18
2237 2477 6.387192 TCTCTCCCATCTTTTTATTGGACA 57.613 37.500 0.00 0.00 31.94 4.02
2238 2478 7.557719 TCATTCTCTCCCATCTTTTTATTGGAC 59.442 37.037 0.00 0.00 31.94 4.02
2239 2479 7.642186 TCATTCTCTCCCATCTTTTTATTGGA 58.358 34.615 0.00 0.00 31.94 3.53
2240 2480 7.886629 TCATTCTCTCCCATCTTTTTATTGG 57.113 36.000 0.00 0.00 0.00 3.16
2241 2481 8.411683 CCTTCATTCTCTCCCATCTTTTTATTG 58.588 37.037 0.00 0.00 0.00 1.90
2242 2482 8.339247 TCCTTCATTCTCTCCCATCTTTTTATT 58.661 33.333 0.00 0.00 0.00 1.40
2243 2483 7.876371 TCCTTCATTCTCTCCCATCTTTTTAT 58.124 34.615 0.00 0.00 0.00 1.40
2244 2484 7.270832 TCCTTCATTCTCTCCCATCTTTTTA 57.729 36.000 0.00 0.00 0.00 1.52
2245 2485 6.144845 TCCTTCATTCTCTCCCATCTTTTT 57.855 37.500 0.00 0.00 0.00 1.94
2246 2486 5.339861 CCTCCTTCATTCTCTCCCATCTTTT 60.340 44.000 0.00 0.00 0.00 2.27
2247 2487 4.165758 CCTCCTTCATTCTCTCCCATCTTT 59.834 45.833 0.00 0.00 0.00 2.52
2248 2488 3.715834 CCTCCTTCATTCTCTCCCATCTT 59.284 47.826 0.00 0.00 0.00 2.40
2249 2489 3.051496 TCCTCCTTCATTCTCTCCCATCT 60.051 47.826 0.00 0.00 0.00 2.90
2250 2490 3.312890 TCCTCCTTCATTCTCTCCCATC 58.687 50.000 0.00 0.00 0.00 3.51
2251 2491 3.316501 CTCCTCCTTCATTCTCTCCCAT 58.683 50.000 0.00 0.00 0.00 4.00
2252 2492 2.756907 CTCCTCCTTCATTCTCTCCCA 58.243 52.381 0.00 0.00 0.00 4.37
2253 2493 1.416030 GCTCCTCCTTCATTCTCTCCC 59.584 57.143 0.00 0.00 0.00 4.30
2254 2494 1.068434 CGCTCCTCCTTCATTCTCTCC 59.932 57.143 0.00 0.00 0.00 3.71
2255 2495 2.028130 TCGCTCCTCCTTCATTCTCTC 58.972 52.381 0.00 0.00 0.00 3.20
2256 2496 2.151502 TCGCTCCTCCTTCATTCTCT 57.848 50.000 0.00 0.00 0.00 3.10
2257 2497 2.482839 CCTTCGCTCCTCCTTCATTCTC 60.483 54.545 0.00 0.00 0.00 2.87
2258 2498 1.484240 CCTTCGCTCCTCCTTCATTCT 59.516 52.381 0.00 0.00 0.00 2.40
2259 2499 1.208293 ACCTTCGCTCCTCCTTCATTC 59.792 52.381 0.00 0.00 0.00 2.67
2260 2500 1.280457 ACCTTCGCTCCTCCTTCATT 58.720 50.000 0.00 0.00 0.00 2.57
2261 2501 2.035632 CTACCTTCGCTCCTCCTTCAT 58.964 52.381 0.00 0.00 0.00 2.57
2262 2502 1.475403 CTACCTTCGCTCCTCCTTCA 58.525 55.000 0.00 0.00 0.00 3.02
2263 2503 0.747852 CCTACCTTCGCTCCTCCTTC 59.252 60.000 0.00 0.00 0.00 3.46
2264 2504 0.041386 ACCTACCTTCGCTCCTCCTT 59.959 55.000 0.00 0.00 0.00 3.36
2265 2505 0.041386 AACCTACCTTCGCTCCTCCT 59.959 55.000 0.00 0.00 0.00 3.69
2266 2506 0.903236 AAACCTACCTTCGCTCCTCC 59.097 55.000 0.00 0.00 0.00 4.30
2267 2507 1.826096 AGAAACCTACCTTCGCTCCTC 59.174 52.381 0.00 0.00 0.00 3.71
2268 2508 1.550976 CAGAAACCTACCTTCGCTCCT 59.449 52.381 0.00 0.00 0.00 3.69
2269 2509 1.405661 CCAGAAACCTACCTTCGCTCC 60.406 57.143 0.00 0.00 0.00 4.70
2270 2510 1.275573 ACCAGAAACCTACCTTCGCTC 59.724 52.381 0.00 0.00 0.00 5.03
2271 2511 1.002087 CACCAGAAACCTACCTTCGCT 59.998 52.381 0.00 0.00 0.00 4.93
2272 2512 1.439679 CACCAGAAACCTACCTTCGC 58.560 55.000 0.00 0.00 0.00 4.70
2273 2513 1.338769 CCCACCAGAAACCTACCTTCG 60.339 57.143 0.00 0.00 0.00 3.79
2274 2514 1.703513 ACCCACCAGAAACCTACCTTC 59.296 52.381 0.00 0.00 0.00 3.46
2275 2515 1.829138 ACCCACCAGAAACCTACCTT 58.171 50.000 0.00 0.00 0.00 3.50
2276 2516 1.829138 AACCCACCAGAAACCTACCT 58.171 50.000 0.00 0.00 0.00 3.08
2277 2517 2.158579 TCAAACCCACCAGAAACCTACC 60.159 50.000 0.00 0.00 0.00 3.18
2278 2518 3.146847 CTCAAACCCACCAGAAACCTAC 58.853 50.000 0.00 0.00 0.00 3.18
2279 2519 2.107552 CCTCAAACCCACCAGAAACCTA 59.892 50.000 0.00 0.00 0.00 3.08
2280 2520 1.133482 CCTCAAACCCACCAGAAACCT 60.133 52.381 0.00 0.00 0.00 3.50
2281 2521 1.328279 CCTCAAACCCACCAGAAACC 58.672 55.000 0.00 0.00 0.00 3.27
2282 2522 0.673985 GCCTCAAACCCACCAGAAAC 59.326 55.000 0.00 0.00 0.00 2.78
2283 2523 0.555769 AGCCTCAAACCCACCAGAAA 59.444 50.000 0.00 0.00 0.00 2.52
2284 2524 0.178992 CAGCCTCAAACCCACCAGAA 60.179 55.000 0.00 0.00 0.00 3.02
2285 2525 1.059584 TCAGCCTCAAACCCACCAGA 61.060 55.000 0.00 0.00 0.00 3.86
2286 2526 0.607489 CTCAGCCTCAAACCCACCAG 60.607 60.000 0.00 0.00 0.00 4.00
2287 2527 1.352622 ACTCAGCCTCAAACCCACCA 61.353 55.000 0.00 0.00 0.00 4.17
2288 2528 0.606673 GACTCAGCCTCAAACCCACC 60.607 60.000 0.00 0.00 0.00 4.61
2289 2529 0.951040 CGACTCAGCCTCAAACCCAC 60.951 60.000 0.00 0.00 0.00 4.61
2290 2530 1.118965 TCGACTCAGCCTCAAACCCA 61.119 55.000 0.00 0.00 0.00 4.51
2291 2531 0.670854 GTCGACTCAGCCTCAAACCC 60.671 60.000 8.70 0.00 0.00 4.11
2292 2532 1.009389 CGTCGACTCAGCCTCAAACC 61.009 60.000 14.70 0.00 0.00 3.27
2293 2533 0.318784 ACGTCGACTCAGCCTCAAAC 60.319 55.000 14.70 0.00 0.00 2.93
2294 2534 1.241165 TACGTCGACTCAGCCTCAAA 58.759 50.000 14.70 0.00 0.00 2.69
2295 2535 1.400846 GATACGTCGACTCAGCCTCAA 59.599 52.381 14.70 0.00 0.00 3.02
2296 2536 1.015109 GATACGTCGACTCAGCCTCA 58.985 55.000 14.70 0.00 0.00 3.86
2297 2537 1.003331 CAGATACGTCGACTCAGCCTC 60.003 57.143 14.70 2.07 0.00 4.70
2298 2538 1.018148 CAGATACGTCGACTCAGCCT 58.982 55.000 14.70 1.46 0.00 4.58
2299 2539 0.733729 ACAGATACGTCGACTCAGCC 59.266 55.000 14.70 0.00 0.00 4.85
2300 2540 1.532090 CCACAGATACGTCGACTCAGC 60.532 57.143 14.70 3.64 0.00 4.26
2301 2541 1.532090 GCCACAGATACGTCGACTCAG 60.532 57.143 14.70 4.12 0.00 3.35
2302 2542 0.450583 GCCACAGATACGTCGACTCA 59.549 55.000 14.70 0.76 0.00 3.41
2303 2543 0.450583 TGCCACAGATACGTCGACTC 59.549 55.000 14.70 4.49 0.00 3.36
2304 2544 1.103803 ATGCCACAGATACGTCGACT 58.896 50.000 14.70 3.37 0.00 4.18
2305 2545 1.852895 GAATGCCACAGATACGTCGAC 59.147 52.381 5.18 5.18 0.00 4.20
2306 2546 1.749063 AGAATGCCACAGATACGTCGA 59.251 47.619 0.00 0.00 0.00 4.20
2307 2547 1.854743 CAGAATGCCACAGATACGTCG 59.145 52.381 0.00 0.00 0.00 5.12
2308 2548 2.893637 ACAGAATGCCACAGATACGTC 58.106 47.619 0.00 0.00 42.53 4.34
2309 2549 3.447586 AGTACAGAATGCCACAGATACGT 59.552 43.478 0.00 0.00 42.53 3.57
2310 2550 4.045104 GAGTACAGAATGCCACAGATACG 58.955 47.826 0.00 0.00 42.53 3.06
2311 2551 4.372656 GGAGTACAGAATGCCACAGATAC 58.627 47.826 0.00 0.00 42.53 2.24
2312 2552 3.388024 GGGAGTACAGAATGCCACAGATA 59.612 47.826 0.00 0.00 42.53 1.98
2313 2553 2.171448 GGGAGTACAGAATGCCACAGAT 59.829 50.000 0.00 0.00 42.53 2.90
2314 2554 1.555075 GGGAGTACAGAATGCCACAGA 59.445 52.381 0.00 0.00 42.53 3.41
2315 2555 1.407437 GGGGAGTACAGAATGCCACAG 60.407 57.143 0.00 0.00 42.53 3.66
2316 2556 0.618458 GGGGAGTACAGAATGCCACA 59.382 55.000 0.00 0.00 42.53 4.17
2317 2557 0.618458 TGGGGAGTACAGAATGCCAC 59.382 55.000 0.00 0.00 42.53 5.01
2318 2558 1.367346 TTGGGGAGTACAGAATGCCA 58.633 50.000 0.00 0.00 42.53 4.92
2319 2559 2.092323 GTTTGGGGAGTACAGAATGCC 58.908 52.381 0.00 0.00 42.53 4.40
2320 2560 2.092323 GGTTTGGGGAGTACAGAATGC 58.908 52.381 0.00 0.00 42.53 3.56
2321 2561 3.610911 GAGGTTTGGGGAGTACAGAATG 58.389 50.000 0.00 0.00 46.00 2.67
2322 2562 2.576648 GGAGGTTTGGGGAGTACAGAAT 59.423 50.000 0.00 0.00 0.00 2.40
2323 2563 1.982958 GGAGGTTTGGGGAGTACAGAA 59.017 52.381 0.00 0.00 0.00 3.02
2324 2564 1.652947 GGAGGTTTGGGGAGTACAGA 58.347 55.000 0.00 0.00 0.00 3.41
2325 2565 0.618981 GGGAGGTTTGGGGAGTACAG 59.381 60.000 0.00 0.00 0.00 2.74
2326 2566 0.104356 TGGGAGGTTTGGGGAGTACA 60.104 55.000 0.00 0.00 0.00 2.90
2327 2567 0.327259 GTGGGAGGTTTGGGGAGTAC 59.673 60.000 0.00 0.00 0.00 2.73
2328 2568 0.104356 TGTGGGAGGTTTGGGGAGTA 60.104 55.000 0.00 0.00 0.00 2.59
2329 2569 0.996762 TTGTGGGAGGTTTGGGGAGT 60.997 55.000 0.00 0.00 0.00 3.85
2330 2570 0.251341 CTTGTGGGAGGTTTGGGGAG 60.251 60.000 0.00 0.00 0.00 4.30
2331 2571 0.996762 ACTTGTGGGAGGTTTGGGGA 60.997 55.000 0.00 0.00 0.00 4.81
2332 2572 0.105709 AACTTGTGGGAGGTTTGGGG 60.106 55.000 0.00 0.00 0.00 4.96
2333 2573 1.788229 AAACTTGTGGGAGGTTTGGG 58.212 50.000 0.00 0.00 32.84 4.12
2334 2574 3.895041 ACATAAACTTGTGGGAGGTTTGG 59.105 43.478 0.00 0.00 35.29 3.28
2335 2575 4.795962 GCACATAAACTTGTGGGAGGTTTG 60.796 45.833 6.70 0.00 45.69 2.93
2336 2576 3.320826 GCACATAAACTTGTGGGAGGTTT 59.679 43.478 6.70 0.00 45.69 3.27
2337 2577 2.890945 GCACATAAACTTGTGGGAGGTT 59.109 45.455 6.70 0.00 45.69 3.50
2338 2578 2.514803 GCACATAAACTTGTGGGAGGT 58.485 47.619 6.70 0.00 45.69 3.85
2339 2579 1.818674 GGCACATAAACTTGTGGGAGG 59.181 52.381 6.70 0.00 45.69 4.30
2340 2580 1.468520 CGGCACATAAACTTGTGGGAG 59.531 52.381 6.70 0.00 45.69 4.30
2341 2581 1.202830 ACGGCACATAAACTTGTGGGA 60.203 47.619 6.70 0.00 45.69 4.37
2342 2582 1.243902 ACGGCACATAAACTTGTGGG 58.756 50.000 6.70 0.00 45.69 4.61
2343 2583 3.049206 CAAACGGCACATAAACTTGTGG 58.951 45.455 6.70 0.00 45.69 4.17
2345 2585 3.490078 CCACAAACGGCACATAAACTTGT 60.490 43.478 0.00 0.00 0.00 3.16
2346 2586 3.049206 CCACAAACGGCACATAAACTTG 58.951 45.455 0.00 0.00 0.00 3.16
2347 2587 2.035321 CCCACAAACGGCACATAAACTT 59.965 45.455 0.00 0.00 0.00 2.66
2348 2588 1.611491 CCCACAAACGGCACATAAACT 59.389 47.619 0.00 0.00 0.00 2.66
2349 2589 1.609555 TCCCACAAACGGCACATAAAC 59.390 47.619 0.00 0.00 0.00 2.01
2350 2590 1.982660 TCCCACAAACGGCACATAAA 58.017 45.000 0.00 0.00 0.00 1.40
2351 2591 2.208132 ATCCCACAAACGGCACATAA 57.792 45.000 0.00 0.00 0.00 1.90
2352 2592 2.208132 AATCCCACAAACGGCACATA 57.792 45.000 0.00 0.00 0.00 2.29
2353 2593 1.337118 AAATCCCACAAACGGCACAT 58.663 45.000 0.00 0.00 0.00 3.21
2354 2594 1.115467 AAAATCCCACAAACGGCACA 58.885 45.000 0.00 0.00 0.00 4.57
2355 2595 1.496934 CAAAATCCCACAAACGGCAC 58.503 50.000 0.00 0.00 0.00 5.01
2356 2596 0.390860 CCAAAATCCCACAAACGGCA 59.609 50.000 0.00 0.00 0.00 5.69
2357 2597 0.676736 TCCAAAATCCCACAAACGGC 59.323 50.000 0.00 0.00 0.00 5.68
2358 2598 1.683917 TGTCCAAAATCCCACAAACGG 59.316 47.619 0.00 0.00 0.00 4.44
2359 2599 3.574614 GATGTCCAAAATCCCACAAACG 58.425 45.455 0.00 0.00 0.00 3.60
2360 2600 3.613910 CGGATGTCCAAAATCCCACAAAC 60.614 47.826 0.00 0.00 40.56 2.93
2361 2601 2.560542 CGGATGTCCAAAATCCCACAAA 59.439 45.455 0.00 0.00 40.56 2.83
2362 2602 2.166829 CGGATGTCCAAAATCCCACAA 58.833 47.619 0.00 0.00 40.56 3.33
2363 2603 1.352687 TCGGATGTCCAAAATCCCACA 59.647 47.619 0.00 0.00 40.56 4.17
2364 2604 2.122783 TCGGATGTCCAAAATCCCAC 57.877 50.000 0.00 0.00 40.56 4.61
2365 2605 2.442413 GTTCGGATGTCCAAAATCCCA 58.558 47.619 0.00 0.00 40.56 4.37
2366 2606 1.400494 CGTTCGGATGTCCAAAATCCC 59.600 52.381 0.00 0.00 40.56 3.85
2367 2607 1.400494 CCGTTCGGATGTCCAAAATCC 59.600 52.381 5.19 0.00 40.30 3.01
2368 2608 2.352388 TCCGTTCGGATGTCCAAAATC 58.648 47.619 10.00 0.00 35.14 2.17
2369 2609 2.483014 TCCGTTCGGATGTCCAAAAT 57.517 45.000 10.00 0.00 35.14 1.82
2370 2610 2.483014 ATCCGTTCGGATGTCCAAAA 57.517 45.000 23.22 0.00 42.83 2.44
2371 2611 2.483014 AATCCGTTCGGATGTCCAAA 57.517 45.000 24.28 0.00 43.58 3.28
2372 2612 2.080693 CAAATCCGTTCGGATGTCCAA 58.919 47.619 24.28 0.00 43.58 3.53
2373 2613 1.677518 CCAAATCCGTTCGGATGTCCA 60.678 52.381 24.28 0.00 43.58 4.02
2374 2614 1.014352 CCAAATCCGTTCGGATGTCC 58.986 55.000 24.28 0.00 43.58 4.02
2375 2615 1.734163 ACCAAATCCGTTCGGATGTC 58.266 50.000 24.28 0.00 43.58 3.06
2376 2616 2.027929 TGTACCAAATCCGTTCGGATGT 60.028 45.455 24.28 17.75 43.58 3.06
2377 2617 2.350498 GTGTACCAAATCCGTTCGGATG 59.650 50.000 24.28 15.59 43.58 3.51
2378 2618 2.624636 GTGTACCAAATCCGTTCGGAT 58.375 47.619 19.24 19.24 46.06 4.18
2379 2619 1.669502 CGTGTACCAAATCCGTTCGGA 60.670 52.381 16.22 16.22 38.82 4.55
2380 2620 0.717224 CGTGTACCAAATCCGTTCGG 59.283 55.000 4.74 4.74 0.00 4.30
2381 2621 0.717224 CCGTGTACCAAATCCGTTCG 59.283 55.000 0.00 0.00 0.00 3.95
2382 2622 0.445043 GCCGTGTACCAAATCCGTTC 59.555 55.000 0.00 0.00 0.00 3.95
2383 2623 1.293267 CGCCGTGTACCAAATCCGTT 61.293 55.000 0.00 0.00 0.00 4.44
2384 2624 1.738830 CGCCGTGTACCAAATCCGT 60.739 57.895 0.00 0.00 0.00 4.69
2385 2625 1.293267 AACGCCGTGTACCAAATCCG 61.293 55.000 0.00 0.00 0.00 4.18
2386 2626 0.167251 CAACGCCGTGTACCAAATCC 59.833 55.000 0.00 0.00 0.00 3.01
2387 2627 0.167251 CCAACGCCGTGTACCAAATC 59.833 55.000 0.00 0.00 0.00 2.17
2388 2628 0.250381 TCCAACGCCGTGTACCAAAT 60.250 50.000 0.00 0.00 0.00 2.32
2389 2629 0.250381 ATCCAACGCCGTGTACCAAA 60.250 50.000 0.00 0.00 0.00 3.28
2390 2630 0.951525 CATCCAACGCCGTGTACCAA 60.952 55.000 0.00 0.00 0.00 3.67
2391 2631 1.374885 CATCCAACGCCGTGTACCA 60.375 57.895 0.00 0.00 0.00 3.25
2392 2632 2.104253 CCATCCAACGCCGTGTACC 61.104 63.158 0.00 0.00 0.00 3.34
2393 2633 1.375013 ACCATCCAACGCCGTGTAC 60.375 57.895 0.00 0.00 0.00 2.90
2394 2634 1.374885 CACCATCCAACGCCGTGTA 60.375 57.895 0.00 0.00 0.00 2.90
2395 2635 2.668185 TTCACCATCCAACGCCGTGT 62.668 55.000 0.00 0.00 0.00 4.49
2396 2636 1.511318 TTTCACCATCCAACGCCGTG 61.511 55.000 0.00 0.00 0.00 4.94
2397 2637 0.820074 TTTTCACCATCCAACGCCGT 60.820 50.000 0.00 0.00 0.00 5.68
2398 2638 0.109781 CTTTTCACCATCCAACGCCG 60.110 55.000 0.00 0.00 0.00 6.46
2399 2639 0.958822 ACTTTTCACCATCCAACGCC 59.041 50.000 0.00 0.00 0.00 5.68
2400 2640 1.336755 ACACTTTTCACCATCCAACGC 59.663 47.619 0.00 0.00 0.00 4.84
2401 2641 2.357637 ACACACTTTTCACCATCCAACG 59.642 45.455 0.00 0.00 0.00 4.10
2402 2642 3.490761 CCACACACTTTTCACCATCCAAC 60.491 47.826 0.00 0.00 0.00 3.77
2403 2643 2.692557 CCACACACTTTTCACCATCCAA 59.307 45.455 0.00 0.00 0.00 3.53
2404 2644 2.305928 CCACACACTTTTCACCATCCA 58.694 47.619 0.00 0.00 0.00 3.41
2405 2645 2.293399 GACCACACACTTTTCACCATCC 59.707 50.000 0.00 0.00 0.00 3.51
2406 2646 2.293399 GGACCACACACTTTTCACCATC 59.707 50.000 0.00 0.00 0.00 3.51
2407 2647 2.306847 GGACCACACACTTTTCACCAT 58.693 47.619 0.00 0.00 0.00 3.55
2408 2648 1.004862 TGGACCACACACTTTTCACCA 59.995 47.619 0.00 0.00 0.00 4.17
2409 2649 1.757682 TGGACCACACACTTTTCACC 58.242 50.000 0.00 0.00 0.00 4.02
2424 2664 1.512156 AATGTTTGGACCGCGTGGAC 61.512 55.000 24.59 16.46 39.21 4.02
2425 2665 0.820074 AAATGTTTGGACCGCGTGGA 60.820 50.000 24.59 0.00 39.21 4.02
2426 2666 0.662970 CAAATGTTTGGACCGCGTGG 60.663 55.000 14.93 14.93 36.50 4.94
2427 2667 2.794941 CAAATGTTTGGACCGCGTG 58.205 52.632 4.92 0.00 34.59 5.34
2436 2676 5.645497 TCTTTGAAACAACCCCAAATGTTTG 59.355 36.000 8.45 0.00 46.60 2.93
2438 2678 5.428184 TCTTTGAAACAACCCCAAATGTT 57.572 34.783 0.00 0.00 41.31 2.71
2439 2679 5.182487 GTTCTTTGAAACAACCCCAAATGT 58.818 37.500 0.00 0.00 0.00 2.71
2440 2680 4.574421 GGTTCTTTGAAACAACCCCAAATG 59.426 41.667 4.01 0.00 34.55 2.32
2441 2681 4.682050 CGGTTCTTTGAAACAACCCCAAAT 60.682 41.667 9.10 0.00 36.93 2.32
2442 2682 3.368531 CGGTTCTTTGAAACAACCCCAAA 60.369 43.478 9.10 0.00 36.93 3.28
2443 2683 2.166664 CGGTTCTTTGAAACAACCCCAA 59.833 45.455 9.10 0.00 36.93 4.12
2444 2684 1.751924 CGGTTCTTTGAAACAACCCCA 59.248 47.619 9.10 0.00 36.93 4.96
2445 2685 1.752498 ACGGTTCTTTGAAACAACCCC 59.248 47.619 9.10 0.00 36.93 4.95
2446 2686 2.164827 ACACGGTTCTTTGAAACAACCC 59.835 45.455 9.10 0.00 36.93 4.11
2447 2687 3.497297 ACACGGTTCTTTGAAACAACC 57.503 42.857 5.18 5.18 36.91 3.77
2448 2688 4.477780 TCAACACGGTTCTTTGAAACAAC 58.522 39.130 0.00 0.00 0.00 3.32
2449 2689 4.768130 TCAACACGGTTCTTTGAAACAA 57.232 36.364 0.00 0.00 0.00 2.83
2450 2690 4.216687 ACTTCAACACGGTTCTTTGAAACA 59.783 37.500 9.41 0.00 38.45 2.83
2451 2691 4.729595 ACTTCAACACGGTTCTTTGAAAC 58.270 39.130 9.41 0.00 38.45 2.78
2452 2692 5.157781 CAACTTCAACACGGTTCTTTGAAA 58.842 37.500 9.41 0.00 38.45 2.69
2453 2693 4.728534 CAACTTCAACACGGTTCTTTGAA 58.271 39.130 8.33 8.33 37.00 2.69
2454 2694 3.426963 GCAACTTCAACACGGTTCTTTGA 60.427 43.478 0.00 0.00 0.00 2.69
2455 2695 2.851824 GCAACTTCAACACGGTTCTTTG 59.148 45.455 0.00 0.00 0.00 2.77
2456 2696 2.159296 GGCAACTTCAACACGGTTCTTT 60.159 45.455 0.00 0.00 0.00 2.52
2457 2697 1.404035 GGCAACTTCAACACGGTTCTT 59.596 47.619 0.00 0.00 0.00 2.52
2458 2698 1.021968 GGCAACTTCAACACGGTTCT 58.978 50.000 0.00 0.00 0.00 3.01
2459 2699 0.030235 GGGCAACTTCAACACGGTTC 59.970 55.000 0.00 0.00 0.00 3.62
2460 2700 0.395173 AGGGCAACTTCAACACGGTT 60.395 50.000 0.00 0.00 0.00 4.44
2461 2701 1.101049 CAGGGCAACTTCAACACGGT 61.101 55.000 0.00 0.00 0.00 4.83
2462 2702 0.817634 TCAGGGCAACTTCAACACGG 60.818 55.000 0.00 0.00 0.00 4.94
2463 2703 0.307760 GTCAGGGCAACTTCAACACG 59.692 55.000 0.00 0.00 0.00 4.49
2464 2704 0.307760 CGTCAGGGCAACTTCAACAC 59.692 55.000 0.00 0.00 0.00 3.32
2465 2705 0.107410 ACGTCAGGGCAACTTCAACA 60.107 50.000 0.00 0.00 0.00 3.33
2466 2706 0.586802 GACGTCAGGGCAACTTCAAC 59.413 55.000 11.55 0.00 0.00 3.18
2467 2707 0.534203 GGACGTCAGGGCAACTTCAA 60.534 55.000 18.91 0.00 0.00 2.69
2468 2708 1.070786 GGACGTCAGGGCAACTTCA 59.929 57.895 18.91 0.00 0.00 3.02
2469 2709 1.671379 GGGACGTCAGGGCAACTTC 60.671 63.158 18.91 0.00 0.00 3.01
2470 2710 0.834687 TAGGGACGTCAGGGCAACTT 60.835 55.000 18.91 0.00 0.00 2.66
2471 2711 1.229082 TAGGGACGTCAGGGCAACT 60.229 57.895 18.91 5.82 0.00 3.16
2472 2712 1.218316 CTAGGGACGTCAGGGCAAC 59.782 63.158 18.91 0.00 0.00 4.17
2473 2713 0.040058 TACTAGGGACGTCAGGGCAA 59.960 55.000 18.91 0.00 0.00 4.52
2474 2714 0.040058 TTACTAGGGACGTCAGGGCA 59.960 55.000 18.91 0.00 0.00 5.36
2475 2715 1.188863 TTTACTAGGGACGTCAGGGC 58.811 55.000 18.91 0.00 0.00 5.19
2476 2716 3.967332 TTTTTACTAGGGACGTCAGGG 57.033 47.619 18.91 6.69 0.00 4.45
2531 2771 9.660180 GCAAAATTGACCCTAAATAAATGGTAA 57.340 29.630 0.00 0.00 0.00 2.85
2532 2772 8.816894 TGCAAAATTGACCCTAAATAAATGGTA 58.183 29.630 0.00 0.00 0.00 3.25
2533 2773 7.606073 GTGCAAAATTGACCCTAAATAAATGGT 59.394 33.333 0.00 0.00 0.00 3.55
2534 2774 7.605691 TGTGCAAAATTGACCCTAAATAAATGG 59.394 33.333 0.00 0.00 0.00 3.16
2535 2775 8.545229 TGTGCAAAATTGACCCTAAATAAATG 57.455 30.769 0.00 0.00 0.00 2.32
2536 2776 8.592809 TCTGTGCAAAATTGACCCTAAATAAAT 58.407 29.630 0.00 0.00 0.00 1.40
2537 2777 7.957002 TCTGTGCAAAATTGACCCTAAATAAA 58.043 30.769 0.00 0.00 0.00 1.40
2538 2778 7.531857 TCTGTGCAAAATTGACCCTAAATAA 57.468 32.000 0.00 0.00 0.00 1.40
2539 2779 7.531857 TTCTGTGCAAAATTGACCCTAAATA 57.468 32.000 0.00 0.00 0.00 1.40
2540 2780 6.418057 TTCTGTGCAAAATTGACCCTAAAT 57.582 33.333 0.00 0.00 0.00 1.40
2541 2781 5.860941 TTCTGTGCAAAATTGACCCTAAA 57.139 34.783 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.