Multiple sequence alignment - TraesCS4D01G311300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G311300 chr4D 100.000 3901 0 0 1 3901 477896213 477900113 0.000000e+00 7204.0
1 TraesCS4D01G311300 chr4D 91.111 90 8 0 168 257 185081050 185080961 5.290000e-24 122.0
2 TraesCS4D01G311300 chr4D 85.981 107 10 2 3265 3371 478025106 478025207 4.120000e-20 110.0
3 TraesCS4D01G311300 chr4D 96.825 63 1 1 3004 3066 477899152 477899213 1.920000e-18 104.0
4 TraesCS4D01G311300 chr4D 96.825 63 1 1 2940 3001 477899216 477899278 1.920000e-18 104.0
5 TraesCS4D01G311300 chr4B 93.152 1358 62 12 1 1339 604053163 604054508 0.000000e+00 1964.0
6 TraesCS4D01G311300 chr4B 92.672 696 25 7 1414 2109 604054568 604055237 0.000000e+00 979.0
7 TraesCS4D01G311300 chr4B 90.079 504 35 9 3000 3497 604056151 604056645 1.180000e-179 640.0
8 TraesCS4D01G311300 chr4B 92.308 338 5 10 2105 2437 604055439 604055760 9.880000e-126 460.0
9 TraesCS4D01G311300 chr4B 90.882 340 26 4 3557 3896 664042509 664042843 5.940000e-123 451.0
10 TraesCS4D01G311300 chr4B 92.520 254 11 1 2748 3001 604055972 604056217 1.330000e-94 357.0
11 TraesCS4D01G311300 chr4B 97.253 182 1 4 2572 2751 488893110 488893289 4.900000e-79 305.0
12 TraesCS4D01G311300 chr4B 94.215 121 5 1 2463 2583 604055852 604055970 2.390000e-42 183.0
13 TraesCS4D01G311300 chr4B 85.047 107 11 2 3265 3371 604150269 604150370 1.920000e-18 104.0
14 TraesCS4D01G311300 chr4A 87.608 1275 97 22 89 1339 684589020 684590257 0.000000e+00 1423.0
15 TraesCS4D01G311300 chr4A 90.786 369 24 6 3004 3369 684604460 684604821 5.860000e-133 484.0
16 TraesCS4D01G311300 chr4A 78.042 756 98 26 1411 2103 684590319 684591069 7.800000e-112 414.0
17 TraesCS4D01G311300 chr4A 95.703 256 11 0 2746 3001 684604266 684604521 2.800000e-111 412.0
18 TraesCS4D01G311300 chr4A 83.117 77 10 2 3295 3371 684638407 684638480 2.520000e-07 67.6
19 TraesCS4D01G311300 chr2B 90.278 360 25 6 3539 3892 673677733 673678088 2.750000e-126 462.0
20 TraesCS4D01G311300 chr2B 89.674 368 24 11 3534 3892 673610033 673610395 1.280000e-124 457.0
21 TraesCS4D01G311300 chr3A 90.909 341 20 6 3562 3896 423601228 423601563 7.690000e-122 448.0
22 TraesCS4D01G311300 chr3A 97.753 178 3 1 2580 2757 264047577 264047753 4.900000e-79 305.0
23 TraesCS4D01G311300 chr6B 90.801 337 26 3 3560 3896 151840796 151840465 2.770000e-121 446.0
24 TraesCS4D01G311300 chr5B 90.671 343 21 5 3560 3896 67024619 67024956 2.770000e-121 446.0
25 TraesCS4D01G311300 chr3B 90.855 339 21 5 3564 3896 416273326 416272992 2.770000e-121 446.0
26 TraesCS4D01G311300 chr3B 99.398 166 1 0 2582 2747 655849420 655849585 6.330000e-78 302.0
27 TraesCS4D01G311300 chr2D 90.671 343 21 7 3560 3896 180089467 180089804 2.770000e-121 446.0
28 TraesCS4D01G311300 chr2D 97.207 179 3 1 2581 2757 425287099 425286921 6.330000e-78 302.0
29 TraesCS4D01G311300 chr2D 86.321 212 20 8 154 362 41851065 41850860 5.070000e-54 222.0
30 TraesCS4D01G311300 chr2D 82.353 204 20 8 164 366 392353718 392353530 3.120000e-36 163.0
31 TraesCS4D01G311300 chr3D 90.202 347 23 5 3557 3897 554948583 554948924 3.580000e-120 442.0
32 TraesCS4D01G311300 chr5A 98.889 180 1 1 2572 2751 382566813 382566635 1.750000e-83 320.0
33 TraesCS4D01G311300 chr2A 98.857 175 2 0 2580 2754 746756987 746757161 2.930000e-81 313.0
34 TraesCS4D01G311300 chr5D 98.851 174 2 0 2579 2752 92111717 92111544 1.050000e-80 311.0
35 TraesCS4D01G311300 chr6D 98.851 174 0 2 2580 2752 32865337 32865165 3.790000e-80 309.0
36 TraesCS4D01G311300 chr6D 82.779 331 28 14 50 366 19273011 19273326 6.420000e-68 268.0
37 TraesCS4D01G311300 chr1D 100.000 166 0 0 2583 2748 238940380 238940215 1.360000e-79 307.0
38 TraesCS4D01G311300 chr1A 79.147 211 26 10 164 373 383751687 383751880 3.160000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G311300 chr4D 477896213 477900113 3900 False 2470.666667 7204 97.883333 1 3901 3 chr4D.!!$F2 3900
1 TraesCS4D01G311300 chr4B 604053163 604056645 3482 False 763.833333 1964 92.491000 1 3497 6 chr4B.!!$F4 3496
2 TraesCS4D01G311300 chr4A 684589020 684591069 2049 False 918.500000 1423 82.825000 89 2103 2 chr4A.!!$F2 2014
3 TraesCS4D01G311300 chr4A 684604266 684604821 555 False 448.000000 484 93.244500 2746 3369 2 chr4A.!!$F3 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.031449 AAACGCCCCAAATTCGTGTG 59.969 50.0 0.0 0.0 36.49 3.82 F
271 281 0.103208 AGAGATTTCCTAGCCGCACG 59.897 55.0 0.0 0.0 0.00 5.34 F
1403 1442 0.179240 GATGCGTTGACTCGTGCAAG 60.179 55.0 0.0 0.0 41.22 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 2070 0.038166 CCAGGAAGCTTGCCAGGTTA 59.962 55.0 15.04 0.0 40.97 2.85 R
2094 2219 0.185901 TTGCAAGAACCAGGAGGCTT 59.814 50.0 0.00 0.0 39.06 4.35 R
3008 3418 0.404040 TCTGGTAGCCCCAAAACAGG 59.596 55.0 0.00 0.0 44.65 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 1.538075 CTAAACGCCCCAAATTCGTGT 59.462 47.619 0.00 0.00 36.49 4.49
62 63 0.031449 AAACGCCCCAAATTCGTGTG 59.969 50.000 0.00 0.00 36.49 3.82
71 72 2.226437 CCAAATTCGTGTGAAGACAGGG 59.774 50.000 0.00 0.00 38.32 4.45
73 74 0.324943 ATTCGTGTGAAGACAGGGGG 59.675 55.000 0.00 0.00 38.32 5.40
128 137 7.170320 TGAAGTAAATCACTGGACGACTAAAAC 59.830 37.037 0.00 0.00 37.63 2.43
134 143 0.675083 TGGACGACTAAAACCTCGCA 59.325 50.000 0.00 0.00 32.98 5.10
152 161 4.429108 TCGCACATCACTAAATCAATCGA 58.571 39.130 0.00 0.00 0.00 3.59
261 271 1.069358 CGGGCTACAGGAGAGATTTCC 59.931 57.143 0.00 0.00 37.52 3.13
271 281 0.103208 AGAGATTTCCTAGCCGCACG 59.897 55.000 0.00 0.00 0.00 5.34
335 350 0.793617 TTGGGAGAGGAGGGAAGAGT 59.206 55.000 0.00 0.00 0.00 3.24
427 442 4.368543 GTCGGTGGGGTGGTCGTC 62.369 72.222 0.00 0.00 0.00 4.20
484 499 2.890766 TTTGGGTGAGGGTCGGAGC 61.891 63.158 0.00 0.00 0.00 4.70
602 618 4.589798 TCGCTAATTATACCCTGTGGCTTA 59.410 41.667 0.00 0.00 33.59 3.09
604 620 5.617252 GCTAATTATACCCTGTGGCTTACA 58.383 41.667 0.00 0.00 37.78 2.41
652 674 4.936823 ACCACACACCGTCGTCGC 62.937 66.667 0.00 0.00 35.54 5.19
754 779 1.359848 CACGGAACCGAGGAAGATTG 58.640 55.000 20.14 1.28 42.83 2.67
772 797 3.121019 CTCGGTAAGAGCCTCGGG 58.879 66.667 0.00 0.00 40.54 5.14
788 813 4.270008 CCTCGGGTGATTGGATTAGTTTT 58.730 43.478 0.00 0.00 0.00 2.43
789 814 4.335594 CCTCGGGTGATTGGATTAGTTTTC 59.664 45.833 0.00 0.00 0.00 2.29
904 929 3.671008 ACCGTACATCTTTGCAGTGTA 57.329 42.857 0.00 0.00 0.00 2.90
906 931 4.575885 ACCGTACATCTTTGCAGTGTATT 58.424 39.130 0.00 0.00 31.71 1.89
908 933 4.034048 CCGTACATCTTTGCAGTGTATTCC 59.966 45.833 0.00 0.00 31.71 3.01
1044 1074 1.209275 CGATCGCCAAGATGTCGGTC 61.209 60.000 0.26 0.00 40.26 4.79
1063 1093 4.903010 CCGGGGGTGTAATCGGCG 62.903 72.222 0.00 0.00 35.95 6.46
1107 1137 1.153706 CGTGGTCGCGATAAAGGGT 60.154 57.895 14.06 0.00 0.00 4.34
1209 1243 3.979347 AGGCATGGAGAGTTGGATTATCT 59.021 43.478 0.00 0.00 0.00 1.98
1213 1247 3.797039 TGGAGAGTTGGATTATCTTGCG 58.203 45.455 0.00 0.00 0.00 4.85
1339 1378 5.009110 TGGCGATGTGATTTTGTTCAAGTAA 59.991 36.000 0.00 0.00 0.00 2.24
1340 1379 6.092748 GGCGATGTGATTTTGTTCAAGTAAT 58.907 36.000 0.00 0.00 0.00 1.89
1341 1380 6.033831 GGCGATGTGATTTTGTTCAAGTAATG 59.966 38.462 0.00 0.00 0.00 1.90
1342 1381 6.452872 GCGATGTGATTTTGTTCAAGTAATGC 60.453 38.462 0.00 0.00 0.00 3.56
1344 1383 7.326789 CGATGTGATTTTGTTCAAGTAATGCTT 59.673 33.333 0.00 0.00 38.08 3.91
1345 1384 8.891671 ATGTGATTTTGTTCAAGTAATGCTTT 57.108 26.923 0.00 0.00 34.69 3.51
1346 1385 8.129161 TGTGATTTTGTTCAAGTAATGCTTTG 57.871 30.769 0.00 0.00 34.69 2.77
1347 1386 7.978414 TGTGATTTTGTTCAAGTAATGCTTTGA 59.022 29.630 0.00 0.00 34.69 2.69
1348 1387 8.482429 GTGATTTTGTTCAAGTAATGCTTTGAG 58.518 33.333 0.00 0.00 34.69 3.02
1350 1389 7.985634 TTTTGTTCAAGTAATGCTTTGAGTC 57.014 32.000 0.00 0.00 34.69 3.36
1351 1390 6.691754 TTGTTCAAGTAATGCTTTGAGTCA 57.308 33.333 0.00 0.00 34.69 3.41
1355 1394 4.761227 TCAAGTAATGCTTTGAGTCATGCA 59.239 37.500 19.17 19.17 39.83 3.96
1356 1395 5.241285 TCAAGTAATGCTTTGAGTCATGCAA 59.759 36.000 20.26 7.03 38.96 4.08
1358 1397 4.763793 AGTAATGCTTTGAGTCATGCAAGT 59.236 37.500 20.26 15.00 38.96 3.16
1359 1398 3.570926 ATGCTTTGAGTCATGCAAGTG 57.429 42.857 20.26 0.00 38.96 3.16
1361 1400 3.151554 TGCTTTGAGTCATGCAAGTGAT 58.848 40.909 15.94 0.00 32.12 3.06
1362 1401 3.057806 TGCTTTGAGTCATGCAAGTGATG 60.058 43.478 15.94 0.00 32.12 3.07
1378 1417 5.841957 AGTGATGCTTCTTTGTTTTCTGT 57.158 34.783 0.88 0.00 0.00 3.41
1380 1419 6.633856 AGTGATGCTTCTTTGTTTTCTGTTT 58.366 32.000 0.88 0.00 0.00 2.83
1381 1420 6.532657 AGTGATGCTTCTTTGTTTTCTGTTTG 59.467 34.615 0.88 0.00 0.00 2.93
1383 1422 4.564041 TGCTTCTTTGTTTTCTGTTTGCA 58.436 34.783 0.00 0.00 0.00 4.08
1384 1423 4.626604 TGCTTCTTTGTTTTCTGTTTGCAG 59.373 37.500 0.00 0.00 43.87 4.41
1395 1434 1.265095 CTGTTTGCAGATGCGTTGACT 59.735 47.619 0.00 0.00 45.28 3.41
1396 1435 1.264020 TGTTTGCAGATGCGTTGACTC 59.736 47.619 0.00 0.00 45.83 3.36
1397 1436 0.512518 TTTGCAGATGCGTTGACTCG 59.487 50.000 0.00 0.00 45.83 4.18
1399 1438 1.284297 TGCAGATGCGTTGACTCGTG 61.284 55.000 0.00 0.00 45.83 4.35
1400 1439 1.417592 CAGATGCGTTGACTCGTGC 59.582 57.895 0.00 0.00 0.00 5.34
1401 1440 1.006220 AGATGCGTTGACTCGTGCA 60.006 52.632 0.00 0.00 42.22 4.57
1402 1441 0.599991 AGATGCGTTGACTCGTGCAA 60.600 50.000 0.00 0.00 41.22 4.08
1403 1442 0.179240 GATGCGTTGACTCGTGCAAG 60.179 55.000 0.00 0.00 41.22 4.01
1404 1443 0.880278 ATGCGTTGACTCGTGCAAGT 60.880 50.000 0.00 0.00 41.22 3.16
1405 1444 1.083401 GCGTTGACTCGTGCAAGTG 60.083 57.895 0.00 0.00 0.00 3.16
1406 1445 1.487452 GCGTTGACTCGTGCAAGTGA 61.487 55.000 8.69 0.00 0.00 3.41
1407 1446 1.139989 CGTTGACTCGTGCAAGTGAT 58.860 50.000 8.69 0.00 0.00 3.06
1408 1447 1.136529 CGTTGACTCGTGCAAGTGATG 60.137 52.381 8.69 0.00 0.00 3.07
1446 1485 4.712051 TTGCAGATGCCCTAGTAATCAT 57.288 40.909 1.72 0.00 41.18 2.45
1676 1715 4.374689 TGGCTGTTCTGGGTAAATGTTA 57.625 40.909 0.00 0.00 0.00 2.41
1696 1742 5.941058 TGTTAAAGTCCAGTTGTTTGAGTGA 59.059 36.000 0.00 0.00 0.00 3.41
1853 1934 9.797642 ATGCATATATTGGTGAAGTCTTATTGA 57.202 29.630 0.00 0.00 0.00 2.57
1919 2002 6.183360 GCTTTGTACCAGAAATATGTGGAGAC 60.183 42.308 6.11 4.73 42.60 3.36
1927 2010 5.064452 CAGAAATATGTGGAGACTTGCAGTC 59.936 44.000 7.88 7.88 45.38 3.51
1947 2054 5.239306 CAGTCAACAGTTCTAAGAATTGGCA 59.761 40.000 0.00 0.00 0.00 4.92
1948 2055 6.006449 AGTCAACAGTTCTAAGAATTGGCAT 58.994 36.000 0.00 0.00 0.00 4.40
1949 2056 6.150140 AGTCAACAGTTCTAAGAATTGGCATC 59.850 38.462 0.00 0.00 0.00 3.91
1950 2057 6.003326 TCAACAGTTCTAAGAATTGGCATCA 58.997 36.000 0.00 0.00 0.00 3.07
1951 2058 6.489700 TCAACAGTTCTAAGAATTGGCATCAA 59.510 34.615 0.00 0.00 37.28 2.57
1952 2059 6.506500 ACAGTTCTAAGAATTGGCATCAAG 57.493 37.500 0.00 0.00 36.19 3.02
1953 2060 6.006449 ACAGTTCTAAGAATTGGCATCAAGT 58.994 36.000 0.00 0.00 36.19 3.16
1954 2061 6.072286 ACAGTTCTAAGAATTGGCATCAAGTG 60.072 38.462 0.00 0.00 36.19 3.16
1955 2062 5.416952 AGTTCTAAGAATTGGCATCAAGTGG 59.583 40.000 0.00 0.00 36.19 4.00
1956 2063 4.922206 TCTAAGAATTGGCATCAAGTGGT 58.078 39.130 0.00 0.00 36.19 4.16
1957 2064 6.061022 TCTAAGAATTGGCATCAAGTGGTA 57.939 37.500 0.00 0.00 36.19 3.25
1958 2065 6.662755 TCTAAGAATTGGCATCAAGTGGTAT 58.337 36.000 0.00 0.00 36.19 2.73
1959 2066 7.118723 TCTAAGAATTGGCATCAAGTGGTATT 58.881 34.615 0.00 0.00 36.19 1.89
1960 2067 5.587388 AGAATTGGCATCAAGTGGTATTG 57.413 39.130 0.00 0.00 36.19 1.90
1961 2068 5.263599 AGAATTGGCATCAAGTGGTATTGA 58.736 37.500 0.00 0.00 43.04 2.57
1962 2069 5.716228 AGAATTGGCATCAAGTGGTATTGAA 59.284 36.000 0.00 0.00 42.21 2.69
1963 2070 6.381994 AGAATTGGCATCAAGTGGTATTGAAT 59.618 34.615 0.00 0.00 42.21 2.57
1964 2071 7.560991 AGAATTGGCATCAAGTGGTATTGAATA 59.439 33.333 0.00 0.00 42.21 1.75
1965 2072 7.658525 ATTGGCATCAAGTGGTATTGAATAA 57.341 32.000 0.00 0.00 42.21 1.40
1966 2073 6.449635 TGGCATCAAGTGGTATTGAATAAC 57.550 37.500 0.00 0.00 42.21 1.89
1967 2074 5.359576 TGGCATCAAGTGGTATTGAATAACC 59.640 40.000 0.00 0.00 42.21 2.85
1968 2075 5.594317 GGCATCAAGTGGTATTGAATAACCT 59.406 40.000 0.00 0.00 42.21 3.50
1969 2076 6.460123 GGCATCAAGTGGTATTGAATAACCTG 60.460 42.308 0.00 0.00 42.21 4.00
1970 2077 6.460123 GCATCAAGTGGTATTGAATAACCTGG 60.460 42.308 0.00 0.00 42.21 4.45
1971 2078 4.947388 TCAAGTGGTATTGAATAACCTGGC 59.053 41.667 0.00 0.00 36.28 4.85
1981 2088 2.134789 ATAACCTGGCAAGCTTCCTG 57.865 50.000 13.76 12.86 0.00 3.86
2023 2130 7.222872 TGTACGGTTCCTTCTTAATGGTTTTA 58.777 34.615 0.00 0.00 0.00 1.52
2028 2138 9.483916 CGGTTCCTTCTTAATGGTTTTAAAAAT 57.516 29.630 1.31 0.00 0.00 1.82
2094 2219 4.382040 GCAGAACATAGTACTTGAGCTCCA 60.382 45.833 12.15 0.00 0.00 3.86
2155 2486 6.145535 GTGTATTTGAGGTCTGAAGCAAAAG 58.854 40.000 0.00 0.00 34.38 2.27
2159 2490 5.913137 TTGAGGTCTGAAGCAAAAGAAAA 57.087 34.783 0.00 0.00 0.00 2.29
2160 2491 5.913137 TGAGGTCTGAAGCAAAAGAAAAA 57.087 34.783 0.00 0.00 0.00 1.94
2206 2537 6.778834 TCAGCATGTGGTGATTCATAAAAT 57.221 33.333 10.56 0.00 46.24 1.82
2207 2538 7.878547 TCAGCATGTGGTGATTCATAAAATA 57.121 32.000 10.56 0.00 46.24 1.40
2208 2539 8.291191 TCAGCATGTGGTGATTCATAAAATAA 57.709 30.769 10.56 0.00 46.24 1.40
2209 2540 8.747471 TCAGCATGTGGTGATTCATAAAATAAA 58.253 29.630 10.56 0.00 46.24 1.40
2210 2541 9.368674 CAGCATGTGGTGATTCATAAAATAAAA 57.631 29.630 6.35 0.00 45.66 1.52
2415 2750 1.829533 CCAGGCTGCAGTGGTGTTT 60.830 57.895 16.64 0.00 0.00 2.83
2416 2751 1.394266 CCAGGCTGCAGTGGTGTTTT 61.394 55.000 16.64 0.00 0.00 2.43
2417 2752 0.031178 CAGGCTGCAGTGGTGTTTTC 59.969 55.000 16.64 0.00 0.00 2.29
2420 2755 1.953686 GGCTGCAGTGGTGTTTTCTTA 59.046 47.619 16.64 0.00 0.00 2.10
2434 2769 6.446318 GTGTTTTCTTATTCATGTTGCTGGA 58.554 36.000 0.00 0.00 0.00 3.86
2435 2770 7.092716 GTGTTTTCTTATTCATGTTGCTGGAT 58.907 34.615 0.00 0.00 0.00 3.41
2437 2772 7.599621 TGTTTTCTTATTCATGTTGCTGGATTG 59.400 33.333 0.00 0.00 0.00 2.67
2438 2773 5.840243 TCTTATTCATGTTGCTGGATTGG 57.160 39.130 0.00 0.00 0.00 3.16
2439 2774 5.263599 TCTTATTCATGTTGCTGGATTGGT 58.736 37.500 0.00 0.00 0.00 3.67
2440 2775 5.716228 TCTTATTCATGTTGCTGGATTGGTT 59.284 36.000 0.00 0.00 0.00 3.67
2441 2776 3.663995 TTCATGTTGCTGGATTGGTTG 57.336 42.857 0.00 0.00 0.00 3.77
2442 2777 2.596346 TCATGTTGCTGGATTGGTTGT 58.404 42.857 0.00 0.00 0.00 3.32
2443 2778 3.760738 TCATGTTGCTGGATTGGTTGTA 58.239 40.909 0.00 0.00 0.00 2.41
2444 2779 4.148079 TCATGTTGCTGGATTGGTTGTAA 58.852 39.130 0.00 0.00 0.00 2.41
2445 2780 4.586421 TCATGTTGCTGGATTGGTTGTAAA 59.414 37.500 0.00 0.00 0.00 2.01
2447 2782 5.543507 TGTTGCTGGATTGGTTGTAAATT 57.456 34.783 0.00 0.00 0.00 1.82
2448 2783 5.923204 TGTTGCTGGATTGGTTGTAAATTT 58.077 33.333 0.00 0.00 0.00 1.82
2450 2785 4.314121 TGCTGGATTGGTTGTAAATTTGC 58.686 39.130 0.00 0.00 0.00 3.68
2452 2787 5.244851 TGCTGGATTGGTTGTAAATTTGCTA 59.755 36.000 7.80 0.00 0.00 3.49
2453 2788 6.162777 GCTGGATTGGTTGTAAATTTGCTAA 58.837 36.000 7.80 0.00 0.00 3.09
2454 2789 6.818142 GCTGGATTGGTTGTAAATTTGCTAAT 59.182 34.615 7.80 3.79 0.00 1.73
2455 2790 7.334171 GCTGGATTGGTTGTAAATTTGCTAATT 59.666 33.333 7.80 0.00 35.49 1.40
2456 2791 8.770438 TGGATTGGTTGTAAATTTGCTAATTC 57.230 30.769 6.58 3.59 32.85 2.17
2457 2792 8.370940 TGGATTGGTTGTAAATTTGCTAATTCA 58.629 29.630 6.58 5.71 32.85 2.57
2458 2793 8.872845 GGATTGGTTGTAAATTTGCTAATTCAG 58.127 33.333 6.58 0.00 32.85 3.02
2486 2888 8.354711 TGTCCTAGAATTAGCATAGGATACAG 57.645 38.462 3.67 0.00 45.14 2.74
2498 2900 5.694006 GCATAGGATACAGTAGAGCAAACAG 59.306 44.000 0.00 0.00 41.41 3.16
2513 2915 5.555017 AGCAAACAGAGTGTTGTGATAGAT 58.445 37.500 0.00 0.00 40.14 1.98
2573 2975 5.175856 CGCAGGGAATTCTTAATTCGACTAG 59.824 44.000 5.23 0.00 46.45 2.57
2585 2987 9.781633 TCTTAATTCGACTAGCTCTATTCTACT 57.218 33.333 0.00 0.00 0.00 2.57
2587 2989 7.443259 AATTCGACTAGCTCTATTCTACTCC 57.557 40.000 0.00 0.00 0.00 3.85
2588 2990 4.897140 TCGACTAGCTCTATTCTACTCCC 58.103 47.826 0.00 0.00 0.00 4.30
2589 2991 4.594062 TCGACTAGCTCTATTCTACTCCCT 59.406 45.833 0.00 0.00 0.00 4.20
2590 2992 4.933400 CGACTAGCTCTATTCTACTCCCTC 59.067 50.000 0.00 0.00 0.00 4.30
2591 2993 5.250982 GACTAGCTCTATTCTACTCCCTCC 58.749 50.000 0.00 0.00 0.00 4.30
2592 2994 3.149005 AGCTCTATTCTACTCCCTCCG 57.851 52.381 0.00 0.00 0.00 4.63
2593 2995 2.444010 AGCTCTATTCTACTCCCTCCGT 59.556 50.000 0.00 0.00 0.00 4.69
2594 2996 3.117436 AGCTCTATTCTACTCCCTCCGTT 60.117 47.826 0.00 0.00 0.00 4.44
2595 2997 3.253921 GCTCTATTCTACTCCCTCCGTTC 59.746 52.174 0.00 0.00 0.00 3.95
2596 2998 3.822167 CTCTATTCTACTCCCTCCGTTCC 59.178 52.174 0.00 0.00 0.00 3.62
2597 2999 2.850695 ATTCTACTCCCTCCGTTCCT 57.149 50.000 0.00 0.00 0.00 3.36
2598 3000 3.967467 ATTCTACTCCCTCCGTTCCTA 57.033 47.619 0.00 0.00 0.00 2.94
2599 3001 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
2600 3002 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2601 3003 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2602 3004 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
2603 3005 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
2604 3006 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
2605 3007 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2606 3008 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2607 3009 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2608 3010 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2609 3011 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2610 3012 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2611 3013 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2612 3014 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2613 3015 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2614 3016 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2615 3017 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2616 3018 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2629 3031 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2630 3032 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2631 3033 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2632 3034 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2633 3035 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2634 3036 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2635 3037 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2636 3038 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2637 3039 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2639 3041 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2640 3042 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2641 3043 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
2642 3044 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2643 3045 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2644 3046 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2645 3047 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2646 3048 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2647 3049 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2648 3050 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2649 3051 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2650 3052 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2651 3053 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2652 3054 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2653 3055 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2654 3056 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2655 3057 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2656 3058 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2657 3059 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2658 3060 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2659 3061 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2660 3062 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2661 3063 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2662 3064 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2663 3065 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2696 3098 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2698 3100 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2699 3101 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2700 3102 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
2701 3103 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
2702 3104 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
2703 3105 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
2704 3106 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
2705 3107 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
2706 3108 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
2707 3109 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
2708 3110 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
2709 3111 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
2710 3112 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
2711 3113 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
2712 3114 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
2713 3115 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
2714 3116 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
2715 3117 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
2716 3118 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
2717 3119 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
2718 3120 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
2719 3121 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
2723 3125 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
2724 3126 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
2741 3143 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
2742 3144 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2743 3145 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2744 3146 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2781 3183 6.612247 ATGACTTGTTTCATTAACGTGTGA 57.388 33.333 0.00 0.00 39.72 3.58
2822 3224 1.476291 GGCCTAATAAACGGGAGGGTG 60.476 57.143 0.00 0.00 0.00 4.61
2917 3319 0.171231 TGATTCGACTCCTCACTGCG 59.829 55.000 0.00 0.00 0.00 5.18
2928 3330 3.784746 CACTGCGCGTGATGATGA 58.215 55.556 22.18 0.00 46.81 2.92
2929 3331 2.304428 CACTGCGCGTGATGATGAT 58.696 52.632 22.18 0.00 46.81 2.45
2930 3332 0.231534 CACTGCGCGTGATGATGATC 59.768 55.000 22.18 0.00 46.81 2.92
2931 3333 0.877649 ACTGCGCGTGATGATGATCC 60.878 55.000 8.43 0.00 0.00 3.36
2932 3334 0.877213 CTGCGCGTGATGATGATCCA 60.877 55.000 8.43 0.00 0.00 3.41
2933 3335 0.249996 TGCGCGTGATGATGATCCAT 60.250 50.000 8.43 0.00 0.00 3.41
2934 3336 0.441533 GCGCGTGATGATGATCCATC 59.558 55.000 8.43 5.31 42.38 3.51
2935 3337 1.073964 CGCGTGATGATGATCCATCC 58.926 55.000 0.00 1.83 41.60 3.51
2952 3362 3.056607 CCATCCAGTTTAGCCTGTTTTGG 60.057 47.826 0.00 0.00 0.00 3.28
2973 3383 3.181464 GGGGCTACCAGAAGTTTAGCTAG 60.181 52.174 4.70 0.00 38.64 3.42
2974 3384 3.459145 GGCTACCAGAAGTTTAGCTAGC 58.541 50.000 6.62 6.62 38.64 3.42
2975 3385 3.459145 GCTACCAGAAGTTTAGCTAGCC 58.541 50.000 12.13 0.00 36.17 3.93
2976 3386 2.674796 ACCAGAAGTTTAGCTAGCCG 57.325 50.000 12.13 0.00 0.00 5.52
2977 3387 1.900486 ACCAGAAGTTTAGCTAGCCGT 59.100 47.619 12.13 0.00 0.00 5.68
2978 3388 2.302157 ACCAGAAGTTTAGCTAGCCGTT 59.698 45.455 12.13 0.00 0.00 4.44
2979 3389 2.673368 CCAGAAGTTTAGCTAGCCGTTG 59.327 50.000 12.13 0.00 0.00 4.10
2980 3390 3.326747 CAGAAGTTTAGCTAGCCGTTGT 58.673 45.455 12.13 0.00 0.00 3.32
2981 3391 3.746492 CAGAAGTTTAGCTAGCCGTTGTT 59.254 43.478 12.13 0.00 0.00 2.83
2982 3392 3.995048 AGAAGTTTAGCTAGCCGTTGTTC 59.005 43.478 12.13 9.62 0.00 3.18
2983 3393 3.396260 AGTTTAGCTAGCCGTTGTTCA 57.604 42.857 12.13 0.00 0.00 3.18
2984 3394 3.064931 AGTTTAGCTAGCCGTTGTTCAC 58.935 45.455 12.13 0.00 0.00 3.18
2994 3404 2.529136 CGTTGTTCACGTTTTGGTGA 57.471 45.000 0.00 0.00 44.49 4.02
2995 3405 2.436670 CGTTGTTCACGTTTTGGTGAG 58.563 47.619 0.00 0.00 46.68 3.51
2996 3406 2.094575 CGTTGTTCACGTTTTGGTGAGA 59.905 45.455 0.00 0.00 46.68 3.27
2997 3407 3.242608 CGTTGTTCACGTTTTGGTGAGAT 60.243 43.478 0.00 0.00 46.68 2.75
2998 3408 4.668289 GTTGTTCACGTTTTGGTGAGATT 58.332 39.130 0.00 0.00 46.68 2.40
2999 3409 4.974368 TGTTCACGTTTTGGTGAGATTT 57.026 36.364 0.00 0.00 46.68 2.17
3000 3410 4.667262 TGTTCACGTTTTGGTGAGATTTG 58.333 39.130 0.00 0.00 46.68 2.32
3001 3411 4.396478 TGTTCACGTTTTGGTGAGATTTGA 59.604 37.500 0.00 0.00 46.68 2.69
3002 3412 4.811555 TCACGTTTTGGTGAGATTTGAG 57.188 40.909 0.00 0.00 41.76 3.02
3003 3413 4.196193 TCACGTTTTGGTGAGATTTGAGT 58.804 39.130 0.00 0.00 41.76 3.41
3004 3414 4.638421 TCACGTTTTGGTGAGATTTGAGTT 59.362 37.500 0.00 0.00 41.76 3.01
3005 3415 5.818336 TCACGTTTTGGTGAGATTTGAGTTA 59.182 36.000 0.00 0.00 41.76 2.24
3006 3416 6.485313 TCACGTTTTGGTGAGATTTGAGTTAT 59.515 34.615 0.00 0.00 41.76 1.89
3007 3417 6.578545 CACGTTTTGGTGAGATTTGAGTTATG 59.421 38.462 0.00 0.00 40.38 1.90
3008 3418 5.569059 CGTTTTGGTGAGATTTGAGTTATGC 59.431 40.000 0.00 0.00 0.00 3.14
3009 3419 5.643379 TTTGGTGAGATTTGAGTTATGCC 57.357 39.130 0.00 0.00 0.00 4.40
3010 3420 4.574674 TGGTGAGATTTGAGTTATGCCT 57.425 40.909 0.00 0.00 0.00 4.75
3011 3421 4.264253 TGGTGAGATTTGAGTTATGCCTG 58.736 43.478 0.00 0.00 0.00 4.85
3012 3422 4.263462 TGGTGAGATTTGAGTTATGCCTGT 60.263 41.667 0.00 0.00 0.00 4.00
3013 3423 4.702131 GGTGAGATTTGAGTTATGCCTGTT 59.298 41.667 0.00 0.00 0.00 3.16
3014 3424 5.183904 GGTGAGATTTGAGTTATGCCTGTTT 59.816 40.000 0.00 0.00 0.00 2.83
3015 3425 6.294731 GGTGAGATTTGAGTTATGCCTGTTTT 60.295 38.462 0.00 0.00 0.00 2.43
3016 3426 6.583806 GTGAGATTTGAGTTATGCCTGTTTTG 59.416 38.462 0.00 0.00 0.00 2.44
3017 3427 6.029346 AGATTTGAGTTATGCCTGTTTTGG 57.971 37.500 0.00 0.00 0.00 3.28
3018 3428 4.599047 TTTGAGTTATGCCTGTTTTGGG 57.401 40.909 0.00 0.00 0.00 4.12
3019 3429 2.524306 TGAGTTATGCCTGTTTTGGGG 58.476 47.619 0.00 0.00 0.00 4.96
3024 3434 3.694746 GCCTGTTTTGGGGCTACC 58.305 61.111 0.00 0.00 44.48 3.18
3035 3445 1.280998 TGGGGCTACCAGAAGTTTAGC 59.719 52.381 0.00 0.00 46.80 3.09
3036 3446 1.560146 GGGGCTACCAGAAGTTTAGCT 59.440 52.381 0.00 0.00 38.64 3.32
3037 3447 2.770232 GGGGCTACCAGAAGTTTAGCTA 59.230 50.000 4.70 0.00 38.64 3.32
3038 3448 3.181464 GGGGCTACCAGAAGTTTAGCTAG 60.181 52.174 4.70 0.00 38.64 3.42
3069 3479 6.773976 TCAAGTTTTGGTGAGATTTGTTCT 57.226 33.333 0.00 0.00 37.41 3.01
3078 3488 7.345422 TGGTGAGATTTGTTCTGAAATTTCA 57.655 32.000 19.45 19.45 35.29 2.69
3130 3543 7.130269 GCTTACTCGTGTAAACAATTGTCTTT 58.870 34.615 12.39 6.14 38.09 2.52
3133 3546 7.259290 ACTCGTGTAAACAATTGTCTTTGAT 57.741 32.000 12.39 0.00 0.00 2.57
3178 3591 1.672881 GAGGCCCTTCACATTCAATCG 59.327 52.381 0.00 0.00 0.00 3.34
3382 3796 8.925161 TGAAATCCTAATTTATCTTTTTGCCG 57.075 30.769 0.00 0.00 35.21 5.69
3402 3816 1.594862 GGAATTCCAAGCTCGATGTCG 59.405 52.381 20.04 0.00 36.98 4.35
3403 3817 2.738643 GGAATTCCAAGCTCGATGTCGA 60.739 50.000 20.04 4.91 40.14 4.20
3404 3818 4.047448 GGAATTCCAAGCTCGATGTCGAT 61.047 47.826 20.04 0.00 40.97 3.59
3405 3819 6.075780 GGAATTCCAAGCTCGATGTCGATG 62.076 50.000 20.04 1.87 40.97 3.84
3420 3834 1.226773 GATGGTAACGACGACGGGG 60.227 63.158 12.58 0.00 44.46 5.73
3437 3852 4.166888 GGCGCAGATGCTCTCCCA 62.167 66.667 10.83 0.00 39.32 4.37
3440 3855 1.220206 CGCAGATGCTCTCCCAGTT 59.780 57.895 2.95 0.00 39.32 3.16
3447 3862 1.985116 GCTCTCCCAGTTCCCTCGT 60.985 63.158 0.00 0.00 0.00 4.18
3450 3865 0.898789 TCTCCCAGTTCCCTCGTCAC 60.899 60.000 0.00 0.00 0.00 3.67
3454 3869 0.038159 CCAGTTCCCTCGTCACTGTC 60.038 60.000 0.00 0.00 36.90 3.51
3470 3885 4.100963 TCACTGTCAATCTACCAACACACT 59.899 41.667 0.00 0.00 0.00 3.55
3471 3886 4.212004 CACTGTCAATCTACCAACACACTG 59.788 45.833 0.00 0.00 0.00 3.66
3490 3905 4.399618 CACTGTAGAGTGCTAGCTCCTTAA 59.600 45.833 17.23 1.80 43.24 1.85
3493 3908 3.390175 AGAGTGCTAGCTCCTTAAGGA 57.610 47.619 22.94 22.94 43.08 3.36
3494 3909 3.922375 AGAGTGCTAGCTCCTTAAGGAT 58.078 45.455 24.48 13.41 44.46 3.24
3495 3910 3.640967 AGAGTGCTAGCTCCTTAAGGATG 59.359 47.826 24.48 18.12 44.46 3.51
3496 3911 3.379452 AGTGCTAGCTCCTTAAGGATGT 58.621 45.455 24.48 16.31 44.46 3.06
3498 3913 3.873952 GTGCTAGCTCCTTAAGGATGTTG 59.126 47.826 24.48 13.75 44.46 3.33
3499 3914 3.774766 TGCTAGCTCCTTAAGGATGTTGA 59.225 43.478 24.48 7.91 44.46 3.18
3500 3915 4.141846 TGCTAGCTCCTTAAGGATGTTGAG 60.142 45.833 24.48 16.76 44.46 3.02
3501 3916 4.141824 GCTAGCTCCTTAAGGATGTTGAGT 60.142 45.833 24.48 6.81 44.46 3.41
3502 3917 4.479786 AGCTCCTTAAGGATGTTGAGTC 57.520 45.455 24.48 8.21 44.46 3.36
3503 3918 4.100373 AGCTCCTTAAGGATGTTGAGTCT 58.900 43.478 24.48 10.09 44.46 3.24
3504 3919 4.081198 AGCTCCTTAAGGATGTTGAGTCTG 60.081 45.833 24.48 9.85 44.46 3.51
3505 3920 4.187694 CTCCTTAAGGATGTTGAGTCTGC 58.812 47.826 24.48 0.00 44.46 4.26
3506 3921 3.840666 TCCTTAAGGATGTTGAGTCTGCT 59.159 43.478 20.72 0.00 39.78 4.24
3507 3922 3.937706 CCTTAAGGATGTTGAGTCTGCTG 59.062 47.826 17.21 0.00 37.39 4.41
3508 3923 4.564406 CCTTAAGGATGTTGAGTCTGCTGT 60.564 45.833 17.21 0.00 37.39 4.40
3509 3924 5.337571 CCTTAAGGATGTTGAGTCTGCTGTA 60.338 44.000 17.21 0.00 37.39 2.74
3510 3925 3.883830 AGGATGTTGAGTCTGCTGTAG 57.116 47.619 0.00 0.00 0.00 2.74
3511 3926 3.169099 AGGATGTTGAGTCTGCTGTAGT 58.831 45.455 0.00 0.00 0.00 2.73
3512 3927 4.344978 AGGATGTTGAGTCTGCTGTAGTA 58.655 43.478 0.00 0.00 0.00 1.82
3513 3928 4.400884 AGGATGTTGAGTCTGCTGTAGTAG 59.599 45.833 0.00 0.00 0.00 2.57
3526 3941 4.715520 CTGTAGTAGCAACGGCAATATG 57.284 45.455 0.00 0.00 44.61 1.78
3527 3942 2.869801 TGTAGTAGCAACGGCAATATGC 59.130 45.455 0.00 0.00 44.61 3.14
3541 3956 7.462109 CGGCAATATGCTGCTTAAATTAAAA 57.538 32.000 0.00 0.00 43.46 1.52
3542 3957 7.904094 CGGCAATATGCTGCTTAAATTAAAAA 58.096 30.769 0.00 0.00 43.46 1.94
3543 3958 7.845622 CGGCAATATGCTGCTTAAATTAAAAAC 59.154 33.333 0.00 0.00 43.46 2.43
3544 3959 8.122330 GGCAATATGCTGCTTAAATTAAAAACC 58.878 33.333 0.00 0.00 44.28 3.27
3545 3960 8.882736 GCAATATGCTGCTTAAATTAAAAACCT 58.117 29.630 0.00 0.00 40.96 3.50
3548 3963 9.807649 ATATGCTGCTTAAATTAAAAACCTCAG 57.192 29.630 0.00 0.00 0.00 3.35
3549 3964 6.454795 TGCTGCTTAAATTAAAAACCTCAGG 58.545 36.000 0.00 0.00 0.00 3.86
3550 3965 5.348724 GCTGCTTAAATTAAAAACCTCAGGC 59.651 40.000 0.00 0.00 0.00 4.85
3551 3966 5.789521 TGCTTAAATTAAAAACCTCAGGCC 58.210 37.500 0.00 0.00 0.00 5.19
3552 3967 5.305644 TGCTTAAATTAAAAACCTCAGGCCA 59.694 36.000 5.01 0.00 0.00 5.36
3553 3968 5.637810 GCTTAAATTAAAAACCTCAGGCCAC 59.362 40.000 5.01 0.00 0.00 5.01
3554 3969 6.732896 TTAAATTAAAAACCTCAGGCCACA 57.267 33.333 5.01 0.00 0.00 4.17
3555 3970 5.622346 AAATTAAAAACCTCAGGCCACAA 57.378 34.783 5.01 0.00 0.00 3.33
3556 3971 4.871933 ATTAAAAACCTCAGGCCACAAG 57.128 40.909 5.01 0.00 0.00 3.16
3557 3972 0.752658 AAAAACCTCAGGCCACAAGC 59.247 50.000 5.01 0.00 42.60 4.01
3558 3973 0.396974 AAAACCTCAGGCCACAAGCA 60.397 50.000 5.01 0.00 46.50 3.91
3559 3974 0.825010 AAACCTCAGGCCACAAGCAG 60.825 55.000 5.01 0.00 46.50 4.24
3560 3975 3.060615 CCTCAGGCCACAAGCAGC 61.061 66.667 5.01 0.00 46.50 5.25
3568 3983 4.711949 CACAAGCAGCCGCCTCCT 62.712 66.667 0.00 0.00 39.83 3.69
3569 3984 4.400961 ACAAGCAGCCGCCTCCTC 62.401 66.667 0.00 0.00 39.83 3.71
3575 3990 3.430497 AGCCGCCTCCTCCTCCTA 61.430 66.667 0.00 0.00 0.00 2.94
3576 3991 3.228017 GCCGCCTCCTCCTCCTAC 61.228 72.222 0.00 0.00 0.00 3.18
3577 3992 2.279073 CCGCCTCCTCCTCCTACA 59.721 66.667 0.00 0.00 0.00 2.74
3578 3993 1.381327 CCGCCTCCTCCTCCTACAA 60.381 63.158 0.00 0.00 0.00 2.41
3579 3994 1.395826 CCGCCTCCTCCTCCTACAAG 61.396 65.000 0.00 0.00 0.00 3.16
3580 3995 0.395862 CGCCTCCTCCTCCTACAAGA 60.396 60.000 0.00 0.00 0.00 3.02
3581 3996 1.867363 GCCTCCTCCTCCTACAAGAA 58.133 55.000 0.00 0.00 0.00 2.52
3582 3997 2.188817 GCCTCCTCCTCCTACAAGAAA 58.811 52.381 0.00 0.00 0.00 2.52
3583 3998 2.169561 GCCTCCTCCTCCTACAAGAAAG 59.830 54.545 0.00 0.00 0.00 2.62
3584 3999 3.714144 CCTCCTCCTCCTACAAGAAAGA 58.286 50.000 0.00 0.00 0.00 2.52
3585 4000 4.097418 CCTCCTCCTCCTACAAGAAAGAA 58.903 47.826 0.00 0.00 0.00 2.52
3586 4001 4.532521 CCTCCTCCTCCTACAAGAAAGAAA 59.467 45.833 0.00 0.00 0.00 2.52
3587 4002 5.337975 CCTCCTCCTCCTACAAGAAAGAAAG 60.338 48.000 0.00 0.00 0.00 2.62
3588 4003 5.155905 TCCTCCTCCTACAAGAAAGAAAGT 58.844 41.667 0.00 0.00 0.00 2.66
3589 4004 5.607171 TCCTCCTCCTACAAGAAAGAAAGTT 59.393 40.000 0.00 0.00 0.00 2.66
3590 4005 6.785963 TCCTCCTCCTACAAGAAAGAAAGTTA 59.214 38.462 0.00 0.00 0.00 2.24
3591 4006 7.038941 TCCTCCTCCTACAAGAAAGAAAGTTAG 60.039 40.741 0.00 0.00 0.00 2.34
3592 4007 7.005709 TCCTCCTACAAGAAAGAAAGTTAGG 57.994 40.000 0.00 0.00 0.00 2.69
3593 4008 6.013639 TCCTCCTACAAGAAAGAAAGTTAGGG 60.014 42.308 0.00 0.00 0.00 3.53
3594 4009 6.239915 CCTCCTACAAGAAAGAAAGTTAGGGT 60.240 42.308 0.00 0.00 0.00 4.34
3595 4010 7.145474 TCCTACAAGAAAGAAAGTTAGGGTT 57.855 36.000 0.00 0.00 0.00 4.11
3596 4011 7.222161 TCCTACAAGAAAGAAAGTTAGGGTTC 58.778 38.462 0.00 0.00 0.00 3.62
3597 4012 6.147328 CCTACAAGAAAGAAAGTTAGGGTTCG 59.853 42.308 0.00 0.00 0.00 3.95
3598 4013 5.434408 ACAAGAAAGAAAGTTAGGGTTCGT 58.566 37.500 0.00 0.00 0.00 3.85
3599 4014 5.296035 ACAAGAAAGAAAGTTAGGGTTCGTG 59.704 40.000 0.00 0.00 32.86 4.35
3600 4015 3.813724 AGAAAGAAAGTTAGGGTTCGTGC 59.186 43.478 0.00 0.00 0.00 5.34
3601 4016 2.180432 AGAAAGTTAGGGTTCGTGCC 57.820 50.000 0.00 0.00 0.00 5.01
3602 4017 1.697982 AGAAAGTTAGGGTTCGTGCCT 59.302 47.619 0.00 0.00 0.00 4.75
3603 4018 2.074576 GAAAGTTAGGGTTCGTGCCTC 58.925 52.381 0.00 0.00 0.00 4.70
3604 4019 0.323957 AAGTTAGGGTTCGTGCCTCC 59.676 55.000 0.00 0.00 0.00 4.30
3605 4020 1.078637 GTTAGGGTTCGTGCCTCCC 60.079 63.158 0.00 0.00 41.36 4.30
3606 4021 2.652095 TTAGGGTTCGTGCCTCCCG 61.652 63.158 0.00 0.00 45.27 5.14
3628 4043 3.790437 CGCTGGTCTGCCCCATCT 61.790 66.667 0.00 0.00 33.00 2.90
3629 4044 2.191641 GCTGGTCTGCCCCATCTC 59.808 66.667 0.00 0.00 33.00 2.75
3630 4045 2.914289 CTGGTCTGCCCCATCTCC 59.086 66.667 0.00 0.00 33.00 3.71
3631 4046 3.083349 TGGTCTGCCCCATCTCCG 61.083 66.667 0.00 0.00 0.00 4.63
3632 4047 3.866582 GGTCTGCCCCATCTCCGG 61.867 72.222 0.00 0.00 0.00 5.14
3633 4048 3.083997 GTCTGCCCCATCTCCGGT 61.084 66.667 0.00 0.00 0.00 5.28
3634 4049 3.083349 TCTGCCCCATCTCCGGTG 61.083 66.667 0.00 0.00 0.00 4.94
3635 4050 4.181010 CTGCCCCATCTCCGGTGG 62.181 72.222 0.00 1.00 36.47 4.61
3640 4055 2.445845 CCATCTCCGGTGGCCCTA 60.446 66.667 0.00 0.00 0.00 3.53
3641 4056 2.511452 CCATCTCCGGTGGCCCTAG 61.511 68.421 0.00 0.00 0.00 3.02
3642 4057 2.122813 ATCTCCGGTGGCCCTAGG 60.123 66.667 0.06 0.06 0.00 3.02
3643 4058 3.776016 ATCTCCGGTGGCCCTAGGG 62.776 68.421 24.89 24.89 38.57 3.53
3653 4068 2.039405 CCCTAGGGCCATGGAGGT 60.039 66.667 16.90 0.00 40.61 3.85
3654 4069 2.455565 CCCTAGGGCCATGGAGGTG 61.456 68.421 16.90 3.76 40.61 4.00
3655 4070 2.512896 CTAGGGCCATGGAGGTGC 59.487 66.667 18.40 0.00 40.61 5.01
3656 4071 3.466791 CTAGGGCCATGGAGGTGCG 62.467 68.421 18.40 0.00 40.61 5.34
3661 4076 3.716195 CCATGGAGGTGCGGTGGA 61.716 66.667 5.56 0.00 31.59 4.02
3662 4077 2.591753 CATGGAGGTGCGGTGGAT 59.408 61.111 0.00 0.00 0.00 3.41
3663 4078 1.524621 CATGGAGGTGCGGTGGATC 60.525 63.158 0.00 0.00 0.00 3.36
3664 4079 2.746375 ATGGAGGTGCGGTGGATCC 61.746 63.158 4.20 4.20 0.00 3.36
3665 4080 3.083997 GGAGGTGCGGTGGATCCT 61.084 66.667 14.23 0.00 0.00 3.24
3666 4081 2.187946 GAGGTGCGGTGGATCCTG 59.812 66.667 14.23 4.04 0.00 3.86
3667 4082 3.391665 GAGGTGCGGTGGATCCTGG 62.392 68.421 14.23 3.07 0.00 4.45
3669 4084 4.408821 GTGCGGTGGATCCTGGCA 62.409 66.667 14.23 16.07 31.83 4.92
3670 4085 3.645660 TGCGGTGGATCCTGGCAA 61.646 61.111 18.43 6.45 31.46 4.52
3671 4086 2.825836 GCGGTGGATCCTGGCAAG 60.826 66.667 14.23 0.00 0.00 4.01
3672 4087 2.124570 CGGTGGATCCTGGCAAGG 60.125 66.667 14.23 0.00 46.06 3.61
3673 4088 2.276740 GGTGGATCCTGGCAAGGG 59.723 66.667 14.23 0.00 44.62 3.95
3674 4089 2.440980 GTGGATCCTGGCAAGGGC 60.441 66.667 14.23 0.00 44.62 5.19
3696 4111 2.045340 GGCAGGGCTCCGCTTTTA 60.045 61.111 0.00 0.00 0.00 1.52
3697 4112 2.407428 GGCAGGGCTCCGCTTTTAC 61.407 63.158 0.00 0.00 0.00 2.01
3698 4113 1.377333 GCAGGGCTCCGCTTTTACT 60.377 57.895 0.00 0.00 0.00 2.24
3699 4114 1.369839 GCAGGGCTCCGCTTTTACTC 61.370 60.000 0.00 0.00 0.00 2.59
3700 4115 1.084370 CAGGGCTCCGCTTTTACTCG 61.084 60.000 0.00 0.00 0.00 4.18
3701 4116 1.814169 GGGCTCCGCTTTTACTCGG 60.814 63.158 0.00 0.00 46.52 4.63
3702 4117 1.079336 GGCTCCGCTTTTACTCGGT 60.079 57.895 0.47 0.00 45.44 4.69
3703 4118 0.672711 GGCTCCGCTTTTACTCGGTT 60.673 55.000 0.47 0.00 45.44 4.44
3704 4119 1.154197 GCTCCGCTTTTACTCGGTTT 58.846 50.000 0.47 0.00 45.44 3.27
3705 4120 1.534163 GCTCCGCTTTTACTCGGTTTT 59.466 47.619 0.47 0.00 45.44 2.43
3706 4121 2.031420 GCTCCGCTTTTACTCGGTTTTT 60.031 45.455 0.47 0.00 45.44 1.94
3729 4144 9.674068 TTTTTCTTTAATTTTGCTAGGGTTTGT 57.326 25.926 0.00 0.00 0.00 2.83
3730 4145 8.655651 TTTCTTTAATTTTGCTAGGGTTTGTG 57.344 30.769 0.00 0.00 0.00 3.33
3731 4146 7.354751 TCTTTAATTTTGCTAGGGTTTGTGT 57.645 32.000 0.00 0.00 0.00 3.72
3732 4147 7.430441 TCTTTAATTTTGCTAGGGTTTGTGTC 58.570 34.615 0.00 0.00 0.00 3.67
3733 4148 4.600692 AATTTTGCTAGGGTTTGTGTCC 57.399 40.909 0.00 0.00 0.00 4.02
3734 4149 3.306472 TTTTGCTAGGGTTTGTGTCCT 57.694 42.857 0.00 0.00 37.18 3.85
3735 4150 2.270352 TTGCTAGGGTTTGTGTCCTG 57.730 50.000 0.00 0.00 34.75 3.86
3736 4151 0.250727 TGCTAGGGTTTGTGTCCTGC 60.251 55.000 0.00 0.00 34.75 4.85
3737 4152 0.036875 GCTAGGGTTTGTGTCCTGCT 59.963 55.000 0.00 0.00 34.75 4.24
3738 4153 1.946283 GCTAGGGTTTGTGTCCTGCTC 60.946 57.143 0.00 0.00 34.75 4.26
3739 4154 1.347707 CTAGGGTTTGTGTCCTGCTCA 59.652 52.381 0.00 0.00 34.75 4.26
3740 4155 0.109342 AGGGTTTGTGTCCTGCTCAG 59.891 55.000 0.00 0.00 31.11 3.35
3750 4165 3.292656 CTGCTCAGGAAGGCGAGA 58.707 61.111 0.00 0.00 0.00 4.04
3751 4166 1.153667 CTGCTCAGGAAGGCGAGAC 60.154 63.158 0.00 0.00 0.00 3.36
3752 4167 2.202676 GCTCAGGAAGGCGAGACG 60.203 66.667 0.00 0.00 0.00 4.18
3753 4168 2.492090 CTCAGGAAGGCGAGACGG 59.508 66.667 0.00 0.00 0.00 4.79
3770 4185 4.760047 GCGGCGGCTTCCTGAAGA 62.760 66.667 9.78 0.00 40.79 2.87
3771 4186 2.187946 CGGCGGCTTCCTGAAGAT 59.812 61.111 11.00 0.00 40.79 2.40
3772 4187 2.176273 CGGCGGCTTCCTGAAGATG 61.176 63.158 11.00 3.24 40.79 2.90
3773 4188 1.821332 GGCGGCTTCCTGAAGATGG 60.821 63.158 11.00 0.44 40.79 3.51
3774 4189 1.221840 GCGGCTTCCTGAAGATGGA 59.778 57.895 11.00 0.00 40.79 3.41
3775 4190 0.392998 GCGGCTTCCTGAAGATGGAA 60.393 55.000 11.00 0.00 40.79 3.53
3776 4191 1.748591 GCGGCTTCCTGAAGATGGAAT 60.749 52.381 11.00 0.00 42.03 3.01
3777 4192 2.485479 GCGGCTTCCTGAAGATGGAATA 60.485 50.000 11.00 0.00 42.03 1.75
3778 4193 3.808728 CGGCTTCCTGAAGATGGAATAA 58.191 45.455 11.00 0.00 42.03 1.40
3779 4194 4.199310 CGGCTTCCTGAAGATGGAATAAA 58.801 43.478 11.00 0.00 42.03 1.40
3780 4195 4.274459 CGGCTTCCTGAAGATGGAATAAAG 59.726 45.833 11.00 0.00 42.03 1.85
3781 4196 4.582240 GGCTTCCTGAAGATGGAATAAAGG 59.418 45.833 11.00 0.00 42.03 3.11
3782 4197 5.196695 GCTTCCTGAAGATGGAATAAAGGT 58.803 41.667 11.00 0.00 42.03 3.50
3783 4198 5.298026 GCTTCCTGAAGATGGAATAAAGGTC 59.702 44.000 11.00 0.00 42.03 3.85
3784 4199 6.642733 TTCCTGAAGATGGAATAAAGGTCT 57.357 37.500 0.00 0.00 38.53 3.85
3785 4200 6.240549 TCCTGAAGATGGAATAAAGGTCTC 57.759 41.667 0.00 0.00 0.00 3.36
3786 4201 5.131142 TCCTGAAGATGGAATAAAGGTCTCC 59.869 44.000 0.00 0.00 0.00 3.71
3787 4202 5.372373 CTGAAGATGGAATAAAGGTCTCCC 58.628 45.833 0.00 0.00 0.00 4.30
3788 4203 4.166144 TGAAGATGGAATAAAGGTCTCCCC 59.834 45.833 0.00 0.00 0.00 4.81
3789 4204 2.706190 AGATGGAATAAAGGTCTCCCCG 59.294 50.000 0.00 0.00 38.74 5.73
3790 4205 0.544697 TGGAATAAAGGTCTCCCCGC 59.455 55.000 0.00 0.00 38.74 6.13
3791 4206 0.179026 GGAATAAAGGTCTCCCCGCC 60.179 60.000 0.00 0.00 38.74 6.13
3792 4207 0.837940 GAATAAAGGTCTCCCCGCCT 59.162 55.000 0.00 0.00 38.74 5.52
3793 4208 2.044758 GAATAAAGGTCTCCCCGCCTA 58.955 52.381 0.00 0.00 38.74 3.93
3794 4209 1.718280 ATAAAGGTCTCCCCGCCTAG 58.282 55.000 0.00 0.00 38.74 3.02
3795 4210 1.047034 TAAAGGTCTCCCCGCCTAGC 61.047 60.000 0.00 0.00 38.74 3.42
3796 4211 4.862823 AGGTCTCCCCGCCTAGCC 62.863 72.222 0.00 0.00 38.74 3.93
3803 4218 4.271016 CCCGCCTAGCCCCCATTC 62.271 72.222 0.00 0.00 0.00 2.67
3804 4219 4.271016 CCGCCTAGCCCCCATTCC 62.271 72.222 0.00 0.00 0.00 3.01
3805 4220 4.626081 CGCCTAGCCCCCATTCCG 62.626 72.222 0.00 0.00 0.00 4.30
3806 4221 4.271016 GCCTAGCCCCCATTCCGG 62.271 72.222 0.00 0.00 0.00 5.14
3807 4222 4.271016 CCTAGCCCCCATTCCGGC 62.271 72.222 0.00 0.00 46.09 6.13
3817 4232 3.454573 ATTCCGGCGGTGCGTCTA 61.455 61.111 27.32 0.36 0.00 2.59
3818 4233 3.426117 ATTCCGGCGGTGCGTCTAG 62.426 63.158 27.32 0.00 0.00 2.43
3831 4246 2.787723 CGTCTAGCATCGTTTTGTGG 57.212 50.000 0.00 0.00 0.00 4.17
3832 4247 1.393539 CGTCTAGCATCGTTTTGTGGG 59.606 52.381 0.00 0.00 0.00 4.61
3833 4248 1.130561 GTCTAGCATCGTTTTGTGGGC 59.869 52.381 0.00 0.00 0.00 5.36
3834 4249 0.096976 CTAGCATCGTTTTGTGGGCG 59.903 55.000 0.00 0.00 0.00 6.13
3835 4250 0.604243 TAGCATCGTTTTGTGGGCGT 60.604 50.000 0.00 0.00 0.00 5.68
3836 4251 1.729131 GCATCGTTTTGTGGGCGTG 60.729 57.895 0.00 0.00 0.00 5.34
3837 4252 1.652012 CATCGTTTTGTGGGCGTGT 59.348 52.632 0.00 0.00 0.00 4.49
3838 4253 0.660005 CATCGTTTTGTGGGCGTGTG 60.660 55.000 0.00 0.00 0.00 3.82
3839 4254 1.791103 ATCGTTTTGTGGGCGTGTGG 61.791 55.000 0.00 0.00 0.00 4.17
3840 4255 2.473760 CGTTTTGTGGGCGTGTGGA 61.474 57.895 0.00 0.00 0.00 4.02
3841 4256 1.358759 GTTTTGTGGGCGTGTGGAG 59.641 57.895 0.00 0.00 0.00 3.86
3842 4257 1.826054 TTTTGTGGGCGTGTGGAGG 60.826 57.895 0.00 0.00 0.00 4.30
3843 4258 2.559922 TTTTGTGGGCGTGTGGAGGT 62.560 55.000 0.00 0.00 0.00 3.85
3844 4259 3.765894 TTGTGGGCGTGTGGAGGTG 62.766 63.158 0.00 0.00 0.00 4.00
3845 4260 4.250305 GTGGGCGTGTGGAGGTGT 62.250 66.667 0.00 0.00 0.00 4.16
3846 4261 4.248842 TGGGCGTGTGGAGGTGTG 62.249 66.667 0.00 0.00 0.00 3.82
3847 4262 4.250305 GGGCGTGTGGAGGTGTGT 62.250 66.667 0.00 0.00 0.00 3.72
3848 4263 2.665185 GGCGTGTGGAGGTGTGTC 60.665 66.667 0.00 0.00 0.00 3.67
3849 4264 2.421739 GCGTGTGGAGGTGTGTCT 59.578 61.111 0.00 0.00 0.00 3.41
3850 4265 1.664965 GCGTGTGGAGGTGTGTCTC 60.665 63.158 0.00 0.00 0.00 3.36
3855 4270 3.311110 GGAGGTGTGTCTCCGGCA 61.311 66.667 0.00 0.00 43.19 5.69
3856 4271 2.262915 GAGGTGTGTCTCCGGCAG 59.737 66.667 0.00 0.00 0.00 4.85
3857 4272 2.203640 AGGTGTGTCTCCGGCAGA 60.204 61.111 0.00 0.00 0.00 4.26
3858 4273 1.608717 GAGGTGTGTCTCCGGCAGAT 61.609 60.000 0.00 0.00 32.08 2.90
3859 4274 1.194781 AGGTGTGTCTCCGGCAGATT 61.195 55.000 0.00 0.00 32.08 2.40
3860 4275 0.321653 GGTGTGTCTCCGGCAGATTT 60.322 55.000 0.00 0.00 32.08 2.17
3861 4276 1.066430 GGTGTGTCTCCGGCAGATTTA 60.066 52.381 0.00 0.00 32.08 1.40
3862 4277 2.420129 GGTGTGTCTCCGGCAGATTTAT 60.420 50.000 0.00 0.00 32.08 1.40
3863 4278 2.866762 GTGTGTCTCCGGCAGATTTATC 59.133 50.000 0.00 0.00 32.08 1.75
3864 4279 2.766263 TGTGTCTCCGGCAGATTTATCT 59.234 45.455 0.00 0.00 37.72 1.98
3865 4280 3.197766 TGTGTCTCCGGCAGATTTATCTT 59.802 43.478 0.00 0.00 34.22 2.40
3866 4281 4.192317 GTGTCTCCGGCAGATTTATCTTT 58.808 43.478 0.00 0.00 34.22 2.52
3867 4282 4.034510 GTGTCTCCGGCAGATTTATCTTTG 59.965 45.833 0.00 0.00 34.22 2.77
3868 4283 3.561725 GTCTCCGGCAGATTTATCTTTGG 59.438 47.826 0.00 0.00 34.22 3.28
3869 4284 3.199946 TCTCCGGCAGATTTATCTTTGGT 59.800 43.478 0.00 0.00 34.22 3.67
3870 4285 3.278574 TCCGGCAGATTTATCTTTGGTG 58.721 45.455 0.00 0.00 34.22 4.17
3871 4286 2.358898 CCGGCAGATTTATCTTTGGTGG 59.641 50.000 0.00 0.00 34.22 4.61
3872 4287 3.278574 CGGCAGATTTATCTTTGGTGGA 58.721 45.455 0.00 0.00 34.22 4.02
3873 4288 3.885297 CGGCAGATTTATCTTTGGTGGAT 59.115 43.478 0.00 0.00 34.22 3.41
3874 4289 4.339247 CGGCAGATTTATCTTTGGTGGATT 59.661 41.667 0.00 0.00 34.22 3.01
3875 4290 5.163519 CGGCAGATTTATCTTTGGTGGATTT 60.164 40.000 0.00 0.00 34.22 2.17
3876 4291 6.044682 GGCAGATTTATCTTTGGTGGATTTG 58.955 40.000 0.00 0.00 34.22 2.32
3877 4292 5.521372 GCAGATTTATCTTTGGTGGATTTGC 59.479 40.000 0.00 0.00 34.22 3.68
3878 4293 6.628844 GCAGATTTATCTTTGGTGGATTTGCT 60.629 38.462 0.00 0.00 34.22 3.91
3879 4294 6.976925 CAGATTTATCTTTGGTGGATTTGCTC 59.023 38.462 0.00 0.00 34.22 4.26
3880 4295 4.963276 TTATCTTTGGTGGATTTGCTCG 57.037 40.909 0.00 0.00 0.00 5.03
3881 4296 1.533625 TCTTTGGTGGATTTGCTCGG 58.466 50.000 0.00 0.00 0.00 4.63
3882 4297 1.073125 TCTTTGGTGGATTTGCTCGGA 59.927 47.619 0.00 0.00 0.00 4.55
3883 4298 2.094675 CTTTGGTGGATTTGCTCGGAT 58.905 47.619 0.00 0.00 0.00 4.18
3884 4299 1.750193 TTGGTGGATTTGCTCGGATC 58.250 50.000 0.00 0.00 0.00 3.36
3885 4300 0.911769 TGGTGGATTTGCTCGGATCT 59.088 50.000 0.00 0.00 0.00 2.75
3886 4301 1.134401 TGGTGGATTTGCTCGGATCTC 60.134 52.381 0.00 0.00 0.00 2.75
3887 4302 1.212616 GTGGATTTGCTCGGATCTCG 58.787 55.000 0.00 0.00 40.90 4.04
3888 4303 0.824109 TGGATTTGCTCGGATCTCGT 59.176 50.000 0.00 0.00 40.32 4.18
3889 4304 1.202417 TGGATTTGCTCGGATCTCGTC 60.202 52.381 0.00 0.00 40.32 4.20
3890 4305 1.124462 GATTTGCTCGGATCTCGTCG 58.876 55.000 0.00 0.00 40.32 5.12
3891 4306 0.456221 ATTTGCTCGGATCTCGTCGT 59.544 50.000 0.00 0.00 40.32 4.34
3892 4307 0.179171 TTTGCTCGGATCTCGTCGTC 60.179 55.000 0.00 0.00 40.32 4.20
3893 4308 2.052941 GCTCGGATCTCGTCGTCG 60.053 66.667 0.00 0.00 40.32 5.12
3894 4309 2.811066 GCTCGGATCTCGTCGTCGT 61.811 63.158 1.33 0.00 40.32 4.34
3895 4310 1.714414 CTCGGATCTCGTCGTCGTT 59.286 57.895 1.33 0.00 40.32 3.85
3896 4311 0.586748 CTCGGATCTCGTCGTCGTTG 60.587 60.000 1.33 0.00 40.32 4.10
3897 4312 1.134075 CGGATCTCGTCGTCGTTGT 59.866 57.895 1.33 0.00 38.33 3.32
3898 4313 0.453950 CGGATCTCGTCGTCGTTGTT 60.454 55.000 1.33 0.00 38.33 2.83
3899 4314 1.257539 GGATCTCGTCGTCGTTGTTC 58.742 55.000 1.33 2.14 38.33 3.18
3900 4315 0.899232 GATCTCGTCGTCGTTGTTCG 59.101 55.000 1.33 0.00 41.41 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.406361 ATTTGGGGCGTTTAGGTCCA 59.594 50.000 0.00 0.00 31.63 4.02
82 90 0.804989 CGAATTTGAGGAGTGTGCCC 59.195 55.000 0.00 0.00 0.00 5.36
128 137 4.318333 CGATTGATTTAGTGATGTGCGAGG 60.318 45.833 0.00 0.00 0.00 4.63
134 143 6.253727 GTCTTCGTCGATTGATTTAGTGATGT 59.746 38.462 0.00 0.00 0.00 3.06
348 363 3.925090 CCCATCCCGCTCCGGTAC 61.925 72.222 0.00 0.00 46.80 3.34
484 499 0.250553 TCTGTTGGTTTAGGCCACCG 60.251 55.000 5.01 0.00 38.42 4.94
587 603 2.419021 GCGTTGTAAGCCACAGGGTATA 60.419 50.000 0.00 0.00 38.72 1.47
588 604 1.677820 GCGTTGTAAGCCACAGGGTAT 60.678 52.381 0.00 0.00 38.72 2.73
602 618 2.023414 TTGAGTCGTCAGGGCGTTGT 62.023 55.000 0.00 0.00 32.98 3.32
604 620 0.878961 GTTTGAGTCGTCAGGGCGTT 60.879 55.000 0.00 0.00 32.98 4.84
665 690 2.168666 GAGGAAGAACGGCGGGAGTT 62.169 60.000 13.24 0.00 34.07 3.01
772 797 7.929941 AGGAGAAGAAAACTAATCCAATCAC 57.070 36.000 0.00 0.00 0.00 3.06
788 813 4.813809 AGATGGAGCAGATTAGGAGAAGA 58.186 43.478 0.00 0.00 0.00 2.87
789 814 5.538053 TGTAGATGGAGCAGATTAGGAGAAG 59.462 44.000 0.00 0.00 0.00 2.85
895 920 3.869912 GCTCTGAAGGGAATACACTGCAA 60.870 47.826 0.00 0.00 34.24 4.08
904 929 2.909006 TGAACTGAGCTCTGAAGGGAAT 59.091 45.455 25.49 0.00 0.00 3.01
906 931 1.620819 GTGAACTGAGCTCTGAAGGGA 59.379 52.381 25.49 0.00 0.00 4.20
908 933 2.686235 CAGTGAACTGAGCTCTGAAGG 58.314 52.381 25.49 8.32 46.59 3.46
1063 1093 0.108520 TAGCGGTCGGAAATGGTGAC 60.109 55.000 0.00 0.00 0.00 3.67
1098 1128 4.154918 GGATGCATCGAATGACCCTTTATC 59.845 45.833 20.15 0.00 0.00 1.75
1107 1137 0.545646 TGGTGGGATGCATCGAATGA 59.454 50.000 20.15 1.61 0.00 2.57
1177 1207 0.818445 CTCCATGCCTGCACTGATCC 60.818 60.000 0.00 0.00 0.00 3.36
1209 1243 5.467735 CAGAATCATTGAGTATGGATCGCAA 59.532 40.000 0.95 0.00 34.85 4.85
1213 1247 5.996513 AGCACAGAATCATTGAGTATGGATC 59.003 40.000 12.68 2.43 34.85 3.36
1339 1378 3.151554 TCACTTGCATGACTCAAAGCAT 58.848 40.909 6.60 0.00 36.80 3.79
1340 1379 2.574450 TCACTTGCATGACTCAAAGCA 58.426 42.857 6.60 5.64 34.79 3.91
1341 1380 3.499048 CATCACTTGCATGACTCAAAGC 58.501 45.455 6.60 0.99 0.00 3.51
1355 1394 6.212888 ACAGAAAACAAAGAAGCATCACTT 57.787 33.333 0.00 0.00 42.98 3.16
1356 1395 5.841957 ACAGAAAACAAAGAAGCATCACT 57.158 34.783 0.00 0.00 0.00 3.41
1358 1397 5.291614 GCAAACAGAAAACAAAGAAGCATCA 59.708 36.000 0.00 0.00 0.00 3.07
1359 1398 5.291614 TGCAAACAGAAAACAAAGAAGCATC 59.708 36.000 0.00 0.00 0.00 3.91
1361 1400 4.564041 TGCAAACAGAAAACAAAGAAGCA 58.436 34.783 0.00 0.00 0.00 3.91
1375 1414 1.265095 AGTCAACGCATCTGCAAACAG 59.735 47.619 2.72 0.00 45.95 3.16
1378 1417 0.512518 CGAGTCAACGCATCTGCAAA 59.487 50.000 2.72 0.00 42.21 3.68
1380 1419 1.006220 ACGAGTCAACGCATCTGCA 60.006 52.632 2.72 0.00 42.21 4.41
1381 1420 1.417592 CACGAGTCAACGCATCTGC 59.582 57.895 0.00 0.00 36.70 4.26
1383 1422 0.599991 TTGCACGAGTCAACGCATCT 60.600 50.000 0.00 0.00 33.71 2.90
1384 1423 0.179240 CTTGCACGAGTCAACGCATC 60.179 55.000 0.00 0.00 33.71 3.91
1386 1425 1.520564 ACTTGCACGAGTCAACGCA 60.521 52.632 0.00 0.00 36.70 5.24
1387 1426 1.083401 CACTTGCACGAGTCAACGC 60.083 57.895 0.00 0.00 36.70 4.84
1388 1427 1.136529 CATCACTTGCACGAGTCAACG 60.137 52.381 0.00 0.00 39.31 4.10
1389 1428 2.584166 CATCACTTGCACGAGTCAAC 57.416 50.000 0.00 0.00 0.00 3.18
1446 1485 4.583489 AGTCTCTTCACGAACACTTCCTTA 59.417 41.667 0.00 0.00 0.00 2.69
1503 1542 5.282510 ACCTTAATTATCTCAGAAGACGCG 58.717 41.667 3.53 3.53 33.32 6.01
1676 1715 5.709966 GTTTCACTCAAACAACTGGACTTT 58.290 37.500 0.00 0.00 43.60 2.66
1853 1934 5.045286 GCCAGTGAGATTAATATCCCCATCT 60.045 44.000 7.59 0.00 0.00 2.90
1919 2002 5.991328 TTCTTAGAACTGTTGACTGCAAG 57.009 39.130 0.00 0.00 42.29 4.01
1927 2010 6.258230 TGATGCCAATTCTTAGAACTGTTG 57.742 37.500 2.76 1.86 0.00 3.33
1947 2054 5.594317 GCCAGGTTATTCAATACCACTTGAT 59.406 40.000 0.00 0.00 35.20 2.57
1948 2055 4.947388 GCCAGGTTATTCAATACCACTTGA 59.053 41.667 0.00 0.00 36.87 3.02
1949 2056 4.704540 TGCCAGGTTATTCAATACCACTTG 59.295 41.667 0.00 0.00 36.87 3.16
1950 2057 4.929479 TGCCAGGTTATTCAATACCACTT 58.071 39.130 0.00 0.00 36.87 3.16
1951 2058 4.584638 TGCCAGGTTATTCAATACCACT 57.415 40.909 0.00 0.00 36.87 4.00
1952 2059 4.440112 GCTTGCCAGGTTATTCAATACCAC 60.440 45.833 0.00 0.00 36.87 4.16
1953 2060 3.699038 GCTTGCCAGGTTATTCAATACCA 59.301 43.478 0.00 0.00 36.87 3.25
1954 2061 3.954258 AGCTTGCCAGGTTATTCAATACC 59.046 43.478 0.00 0.00 34.54 2.73
1955 2062 5.450550 GGAAGCTTGCCAGGTTATTCAATAC 60.451 44.000 2.10 0.00 40.97 1.89
1956 2063 4.644685 GGAAGCTTGCCAGGTTATTCAATA 59.355 41.667 2.10 0.00 40.97 1.90
1957 2064 3.448660 GGAAGCTTGCCAGGTTATTCAAT 59.551 43.478 2.10 0.00 40.97 2.57
1958 2065 2.825532 GGAAGCTTGCCAGGTTATTCAA 59.174 45.455 2.10 0.00 40.97 2.69
1959 2066 2.041620 AGGAAGCTTGCCAGGTTATTCA 59.958 45.455 15.04 0.00 40.97 2.57
1960 2067 2.424956 CAGGAAGCTTGCCAGGTTATTC 59.575 50.000 15.04 0.00 40.97 1.75
1961 2068 2.450476 CAGGAAGCTTGCCAGGTTATT 58.550 47.619 15.04 0.00 40.97 1.40
1962 2069 1.341383 CCAGGAAGCTTGCCAGGTTAT 60.341 52.381 15.04 0.00 40.97 1.89
1963 2070 0.038166 CCAGGAAGCTTGCCAGGTTA 59.962 55.000 15.04 0.00 40.97 2.85
1964 2071 1.228675 CCAGGAAGCTTGCCAGGTT 60.229 57.895 15.04 1.27 43.69 3.50
1965 2072 2.134630 CTCCAGGAAGCTTGCCAGGT 62.135 60.000 21.24 0.00 34.02 4.00
1966 2073 1.378250 CTCCAGGAAGCTTGCCAGG 60.378 63.158 15.04 16.55 33.65 4.45
1967 2074 0.615331 TACTCCAGGAAGCTTGCCAG 59.385 55.000 15.04 10.60 0.00 4.85
1968 2075 1.065199 CATACTCCAGGAAGCTTGCCA 60.065 52.381 15.04 0.00 0.00 4.92
1969 2076 1.065126 ACATACTCCAGGAAGCTTGCC 60.065 52.381 15.04 10.33 0.00 4.52
1970 2077 2.284190 GACATACTCCAGGAAGCTTGC 58.716 52.381 10.41 10.41 0.00 4.01
1971 2078 2.237143 TGGACATACTCCAGGAAGCTTG 59.763 50.000 2.10 0.00 44.99 4.01
2094 2219 0.185901 TTGCAAGAACCAGGAGGCTT 59.814 50.000 0.00 0.00 39.06 4.35
2162 2493 7.775093 TGCTGAAGGCTATAGTGTATCATTTTT 59.225 33.333 0.84 0.00 42.39 1.94
2163 2494 7.282585 TGCTGAAGGCTATAGTGTATCATTTT 58.717 34.615 0.84 0.00 42.39 1.82
2164 2495 6.830912 TGCTGAAGGCTATAGTGTATCATTT 58.169 36.000 0.84 0.00 42.39 2.32
2180 2511 2.439409 TGAATCACCACATGCTGAAGG 58.561 47.619 0.00 0.00 0.00 3.46
2218 2549 2.100879 CTATGGGTAGGCACCGAGGC 62.101 65.000 0.00 0.00 46.86 4.70
2328 2660 3.007940 TGCCTTCTAGTGTATTGTGCTGT 59.992 43.478 0.00 0.00 0.00 4.40
2415 2750 5.716228 ACCAATCCAGCAACATGAATAAGAA 59.284 36.000 0.00 0.00 0.00 2.52
2416 2751 5.263599 ACCAATCCAGCAACATGAATAAGA 58.736 37.500 0.00 0.00 0.00 2.10
2417 2752 5.587388 ACCAATCCAGCAACATGAATAAG 57.413 39.130 0.00 0.00 0.00 1.73
2420 2755 3.579586 ACAACCAATCCAGCAACATGAAT 59.420 39.130 0.00 0.00 0.00 2.57
2452 2787 6.359804 TGCTAATTCTAGGACATGCTGAATT 58.640 36.000 12.86 12.86 39.61 2.17
2453 2788 5.933617 TGCTAATTCTAGGACATGCTGAAT 58.066 37.500 0.00 0.00 0.00 2.57
2454 2789 5.357742 TGCTAATTCTAGGACATGCTGAA 57.642 39.130 0.00 0.00 0.00 3.02
2455 2790 5.557576 ATGCTAATTCTAGGACATGCTGA 57.442 39.130 0.00 0.00 0.00 4.26
2456 2791 5.873712 CCTATGCTAATTCTAGGACATGCTG 59.126 44.000 0.00 0.00 35.07 4.41
2457 2792 5.782331 TCCTATGCTAATTCTAGGACATGCT 59.218 40.000 0.00 0.00 36.87 3.79
2458 2793 6.042638 TCCTATGCTAATTCTAGGACATGC 57.957 41.667 0.00 0.00 36.87 4.06
2459 2794 8.753133 TGTATCCTATGCTAATTCTAGGACATG 58.247 37.037 0.00 0.00 42.80 3.21
2460 2795 8.901472 TGTATCCTATGCTAATTCTAGGACAT 57.099 34.615 0.00 0.00 42.80 3.06
2461 2796 7.950684 ACTGTATCCTATGCTAATTCTAGGACA 59.049 37.037 0.00 0.00 42.80 4.02
2486 2888 4.119862 TCACAACACTCTGTTTGCTCTAC 58.880 43.478 0.00 0.00 38.77 2.59
2498 2900 8.668510 ATGTTTCCATATCTATCACAACACTC 57.331 34.615 0.00 0.00 0.00 3.51
2542 2944 2.550830 AGAATTCCCTGCGCGATATT 57.449 45.000 12.10 0.00 0.00 1.28
2543 2945 2.550830 AAGAATTCCCTGCGCGATAT 57.449 45.000 12.10 0.00 0.00 1.63
2564 2966 5.941647 GGGAGTAGAATAGAGCTAGTCGAAT 59.058 44.000 0.00 0.00 38.56 3.34
2573 2975 2.866351 ACGGAGGGAGTAGAATAGAGC 58.134 52.381 0.00 0.00 0.00 4.09
2583 2985 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
2584 2986 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2585 2987 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2586 2988 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2587 2989 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2588 2990 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2589 2991 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2590 2992 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2603 3005 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2604 3006 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2605 3007 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2606 3008 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2607 3009 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2608 3010 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2609 3011 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2610 3012 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2611 3013 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2612 3014 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2613 3015 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2614 3016 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2615 3017 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
2616 3018 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
2617 3019 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
2618 3020 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2619 3021 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2620 3022 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2621 3023 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2622 3024 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2623 3025 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2624 3026 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2625 3027 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2626 3028 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2627 3029 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2628 3030 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2629 3031 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2630 3032 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2631 3033 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2632 3034 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2633 3035 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2634 3036 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2635 3037 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2636 3038 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2637 3039 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2638 3040 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2639 3041 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2640 3042 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2641 3043 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2670 3072 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
2672 3074 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2673 3075 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2674 3076 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2675 3077 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
2676 3078 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
2677 3079 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
2678 3080 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
2679 3081 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
2680 3082 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
2681 3083 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
2697 3099 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
2698 3100 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
2715 3117 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
2716 3118 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2717 3119 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2718 3120 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2719 3121 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2720 3122 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2721 3123 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2722 3124 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2723 3125 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2724 3126 6.557633 ACATACTCCCTCCGTTCCTAAATATT 59.442 38.462 0.00 0.00 0.00 1.28
2725 3127 6.082707 ACATACTCCCTCCGTTCCTAAATAT 58.917 40.000 0.00 0.00 0.00 1.28
2726 3128 5.461327 ACATACTCCCTCCGTTCCTAAATA 58.539 41.667 0.00 0.00 0.00 1.40
2727 3129 4.296056 ACATACTCCCTCCGTTCCTAAAT 58.704 43.478 0.00 0.00 0.00 1.40
2728 3130 3.716431 ACATACTCCCTCCGTTCCTAAA 58.284 45.455 0.00 0.00 0.00 1.85
2729 3131 3.393426 ACATACTCCCTCCGTTCCTAA 57.607 47.619 0.00 0.00 0.00 2.69
2730 3132 3.028850 CAACATACTCCCTCCGTTCCTA 58.971 50.000 0.00 0.00 0.00 2.94
2731 3133 1.831736 CAACATACTCCCTCCGTTCCT 59.168 52.381 0.00 0.00 0.00 3.36
2732 3134 1.742750 GCAACATACTCCCTCCGTTCC 60.743 57.143 0.00 0.00 0.00 3.62
2733 3135 1.066430 TGCAACATACTCCCTCCGTTC 60.066 52.381 0.00 0.00 0.00 3.95
2734 3136 0.981183 TGCAACATACTCCCTCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
2735 3137 1.139058 GATGCAACATACTCCCTCCGT 59.861 52.381 0.00 0.00 0.00 4.69
2736 3138 1.138859 TGATGCAACATACTCCCTCCG 59.861 52.381 0.00 0.00 0.00 4.63
2737 3139 3.498774 ATGATGCAACATACTCCCTCC 57.501 47.619 7.82 0.00 0.00 4.30
2738 3140 5.641209 GTCATATGATGCAACATACTCCCTC 59.359 44.000 17.79 4.01 35.91 4.30
2739 3141 5.309020 AGTCATATGATGCAACATACTCCCT 59.691 40.000 17.79 9.35 35.91 4.20
2740 3142 5.555017 AGTCATATGATGCAACATACTCCC 58.445 41.667 17.79 7.50 35.91 4.30
2741 3143 6.484643 ACAAGTCATATGATGCAACATACTCC 59.515 38.462 17.79 9.03 35.91 3.85
2742 3144 7.488187 ACAAGTCATATGATGCAACATACTC 57.512 36.000 17.79 11.31 35.91 2.59
2743 3145 7.870509 AACAAGTCATATGATGCAACATACT 57.129 32.000 17.79 11.20 35.91 2.12
2744 3146 8.183536 TGAAACAAGTCATATGATGCAACATAC 58.816 33.333 17.79 9.17 35.91 2.39
2781 3183 5.196695 GCCTAAAGGGATCTGAAGAAACAT 58.803 41.667 0.00 0.00 37.23 2.71
2822 3224 1.524621 CGGCCAGATGATGTGGGTC 60.525 63.158 10.88 0.00 35.39 4.46
2917 3319 2.074576 CTGGATGGATCATCATCACGC 58.925 52.381 12.31 0.00 43.82 5.34
2928 3330 4.322057 AAACAGGCTAAACTGGATGGAT 57.678 40.909 0.00 0.00 42.75 3.41
2929 3331 3.806949 AAACAGGCTAAACTGGATGGA 57.193 42.857 0.00 0.00 42.75 3.41
2930 3332 3.056607 CCAAAACAGGCTAAACTGGATGG 60.057 47.826 0.00 0.00 42.75 3.51
2931 3333 3.056607 CCCAAAACAGGCTAAACTGGATG 60.057 47.826 6.47 0.00 42.75 3.51
2932 3334 3.165071 CCCAAAACAGGCTAAACTGGAT 58.835 45.455 6.47 0.00 42.75 3.41
2933 3335 2.593026 CCCAAAACAGGCTAAACTGGA 58.407 47.619 6.47 0.00 42.75 3.86
2934 3336 1.618343 CCCCAAAACAGGCTAAACTGG 59.382 52.381 0.00 0.00 42.75 4.00
2935 3337 1.000843 GCCCCAAAACAGGCTAAACTG 59.999 52.381 0.00 0.00 46.14 3.16
2952 3362 3.741700 GCTAGCTAAACTTCTGGTAGCCC 60.742 52.174 7.70 0.00 46.04 5.19
2976 3386 3.750639 TCTCACCAAAACGTGAACAAC 57.249 42.857 0.00 0.00 42.06 3.32
2977 3387 4.974368 AATCTCACCAAAACGTGAACAA 57.026 36.364 0.00 0.00 42.06 2.83
2978 3388 4.396478 TCAAATCTCACCAAAACGTGAACA 59.604 37.500 0.00 0.00 42.06 3.18
2979 3389 4.915704 TCAAATCTCACCAAAACGTGAAC 58.084 39.130 0.00 0.00 42.06 3.18
2980 3390 4.638421 ACTCAAATCTCACCAAAACGTGAA 59.362 37.500 0.00 0.00 42.06 3.18
2981 3391 4.196193 ACTCAAATCTCACCAAAACGTGA 58.804 39.130 0.00 0.00 40.44 4.35
2982 3392 4.552166 ACTCAAATCTCACCAAAACGTG 57.448 40.909 0.00 0.00 34.93 4.49
2983 3393 6.668323 CATAACTCAAATCTCACCAAAACGT 58.332 36.000 0.00 0.00 0.00 3.99
2984 3394 5.569059 GCATAACTCAAATCTCACCAAAACG 59.431 40.000 0.00 0.00 0.00 3.60
2985 3395 5.863935 GGCATAACTCAAATCTCACCAAAAC 59.136 40.000 0.00 0.00 0.00 2.43
2986 3396 5.774690 AGGCATAACTCAAATCTCACCAAAA 59.225 36.000 0.00 0.00 0.00 2.44
2987 3397 5.183713 CAGGCATAACTCAAATCTCACCAAA 59.816 40.000 0.00 0.00 0.00 3.28
2988 3398 4.701651 CAGGCATAACTCAAATCTCACCAA 59.298 41.667 0.00 0.00 0.00 3.67
2989 3399 4.263462 ACAGGCATAACTCAAATCTCACCA 60.263 41.667 0.00 0.00 0.00 4.17
2990 3400 4.265073 ACAGGCATAACTCAAATCTCACC 58.735 43.478 0.00 0.00 0.00 4.02
2991 3401 5.886960 AACAGGCATAACTCAAATCTCAC 57.113 39.130 0.00 0.00 0.00 3.51
2992 3402 6.294675 CCAAAACAGGCATAACTCAAATCTCA 60.295 38.462 0.00 0.00 0.00 3.27
2993 3403 6.095377 CCAAAACAGGCATAACTCAAATCTC 58.905 40.000 0.00 0.00 0.00 2.75
2994 3404 5.047092 CCCAAAACAGGCATAACTCAAATCT 60.047 40.000 0.00 0.00 0.00 2.40
2995 3405 5.170748 CCCAAAACAGGCATAACTCAAATC 58.829 41.667 0.00 0.00 0.00 2.17
2996 3406 4.020307 CCCCAAAACAGGCATAACTCAAAT 60.020 41.667 0.00 0.00 0.00 2.32
2997 3407 3.323403 CCCCAAAACAGGCATAACTCAAA 59.677 43.478 0.00 0.00 0.00 2.69
2998 3408 2.896685 CCCCAAAACAGGCATAACTCAA 59.103 45.455 0.00 0.00 0.00 3.02
2999 3409 2.524306 CCCCAAAACAGGCATAACTCA 58.476 47.619 0.00 0.00 0.00 3.41
3008 3418 0.404040 TCTGGTAGCCCCAAAACAGG 59.596 55.000 0.00 0.00 44.65 4.00
3009 3419 2.162681 CTTCTGGTAGCCCCAAAACAG 58.837 52.381 0.00 0.00 44.65 3.16
3010 3420 1.497286 ACTTCTGGTAGCCCCAAAACA 59.503 47.619 0.00 0.00 44.65 2.83
3011 3421 2.287977 ACTTCTGGTAGCCCCAAAAC 57.712 50.000 0.00 0.00 44.65 2.43
3012 3422 3.322191 AAACTTCTGGTAGCCCCAAAA 57.678 42.857 0.00 0.00 44.65 2.44
3013 3423 3.812882 GCTAAACTTCTGGTAGCCCCAAA 60.813 47.826 0.00 0.00 44.65 3.28
3014 3424 2.290705 GCTAAACTTCTGGTAGCCCCAA 60.291 50.000 0.00 0.00 44.65 4.12
3015 3425 1.280998 GCTAAACTTCTGGTAGCCCCA 59.719 52.381 0.00 0.00 42.51 4.96
3016 3426 1.560146 AGCTAAACTTCTGGTAGCCCC 59.440 52.381 0.00 0.00 40.96 5.80
3017 3427 3.741700 GCTAGCTAAACTTCTGGTAGCCC 60.742 52.174 7.70 0.00 46.04 5.19
3018 3428 3.459145 GCTAGCTAAACTTCTGGTAGCC 58.541 50.000 7.70 0.00 46.04 3.93
3020 3430 3.130693 ACGGCTAGCTAAACTTCTGGTAG 59.869 47.826 15.72 0.00 35.60 3.18
3021 3431 3.094572 ACGGCTAGCTAAACTTCTGGTA 58.905 45.455 15.72 0.00 0.00 3.25
3022 3432 1.900486 ACGGCTAGCTAAACTTCTGGT 59.100 47.619 15.72 0.00 0.00 4.00
3023 3433 2.673368 CAACGGCTAGCTAAACTTCTGG 59.327 50.000 15.72 0.00 0.00 3.86
3024 3434 3.326747 ACAACGGCTAGCTAAACTTCTG 58.673 45.455 15.72 3.97 0.00 3.02
3025 3435 3.679824 ACAACGGCTAGCTAAACTTCT 57.320 42.857 15.72 0.00 0.00 2.85
3026 3436 3.744426 TGAACAACGGCTAGCTAAACTTC 59.256 43.478 15.72 10.64 0.00 3.01
3027 3437 3.735591 TGAACAACGGCTAGCTAAACTT 58.264 40.909 15.72 0.95 0.00 2.66
3028 3438 3.396260 TGAACAACGGCTAGCTAAACT 57.604 42.857 15.72 0.00 0.00 2.66
3029 3439 3.497262 ACTTGAACAACGGCTAGCTAAAC 59.503 43.478 15.72 0.00 0.00 2.01
3030 3440 3.735591 ACTTGAACAACGGCTAGCTAAA 58.264 40.909 15.72 0.00 0.00 1.85
3031 3441 3.396260 ACTTGAACAACGGCTAGCTAA 57.604 42.857 15.72 0.00 0.00 3.09
3032 3442 3.396260 AACTTGAACAACGGCTAGCTA 57.604 42.857 15.72 0.00 0.00 3.32
3033 3443 2.256117 AACTTGAACAACGGCTAGCT 57.744 45.000 15.72 0.00 0.00 3.32
3034 3444 3.042887 CAAAACTTGAACAACGGCTAGC 58.957 45.455 6.04 6.04 0.00 3.42
3035 3445 3.066203 ACCAAAACTTGAACAACGGCTAG 59.934 43.478 0.00 0.00 0.00 3.42
3036 3446 3.018149 ACCAAAACTTGAACAACGGCTA 58.982 40.909 0.00 0.00 0.00 3.93
3037 3447 1.822371 ACCAAAACTTGAACAACGGCT 59.178 42.857 0.00 0.00 0.00 5.52
3038 3448 1.923864 CACCAAAACTTGAACAACGGC 59.076 47.619 0.00 0.00 0.00 5.68
3078 3488 3.212685 CAACAACAATGGTGGGCAAAAT 58.787 40.909 2.39 0.00 40.75 1.82
3130 3543 7.353414 TGAGGTTTTACATTTGACCAAATCA 57.647 32.000 5.10 0.00 38.84 2.57
3133 3546 6.920758 CGATTGAGGTTTTACATTTGACCAAA 59.079 34.615 0.00 0.00 34.60 3.28
3281 3694 9.241919 TGCAGAATTTGAAGGAGTAATAAATCA 57.758 29.630 0.00 0.00 0.00 2.57
3343 3757 3.711190 AGGATTTCAGTTGGCCTTTTTGT 59.289 39.130 3.32 0.00 0.00 2.83
3382 3796 1.594862 CGACATCGAGCTTGGAATTCC 59.405 52.381 18.17 18.17 43.02 3.01
3402 3816 1.226773 CCCCGTCGTCGTTACCATC 60.227 63.158 0.71 0.00 35.01 3.51
3403 3817 2.713967 CCCCCGTCGTCGTTACCAT 61.714 63.158 0.71 0.00 35.01 3.55
3404 3818 3.372730 CCCCCGTCGTCGTTACCA 61.373 66.667 0.71 0.00 35.01 3.25
3405 3819 4.801624 GCCCCCGTCGTCGTTACC 62.802 72.222 0.71 0.00 35.01 2.85
3424 3838 2.246735 AGGGAACTGGGAGAGCATCTG 61.247 57.143 0.00 0.00 44.47 2.90
3425 3839 0.043940 AGGGAACTGGGAGAGCATCT 59.956 55.000 0.00 0.00 46.97 2.90
3440 3855 1.924731 AGATTGACAGTGACGAGGGA 58.075 50.000 0.00 0.00 0.00 4.20
3447 3862 4.100963 AGTGTGTTGGTAGATTGACAGTGA 59.899 41.667 0.00 0.00 0.00 3.41
3450 3865 4.380531 ACAGTGTGTTGGTAGATTGACAG 58.619 43.478 0.00 0.00 0.00 3.51
3454 3869 5.635280 CACTCTACAGTGTGTTGGTAGATTG 59.365 44.000 5.88 0.44 44.63 2.67
3470 3885 3.954904 CCTTAAGGAGCTAGCACTCTACA 59.045 47.826 17.21 0.52 36.87 2.74
3471 3886 4.208746 TCCTTAAGGAGCTAGCACTCTAC 58.791 47.826 20.72 0.00 39.78 2.59
3490 3905 3.169099 ACTACAGCAGACTCAACATCCT 58.831 45.455 0.00 0.00 0.00 3.24
3504 3919 6.591441 GCATATTGCCGTTGCTACTACAGC 62.591 50.000 0.00 0.00 43.71 4.40
3505 3920 3.059597 GCATATTGCCGTTGCTACTACAG 60.060 47.826 0.00 0.00 37.42 2.74
3506 3921 2.869801 GCATATTGCCGTTGCTACTACA 59.130 45.455 0.00 0.00 37.42 2.74
3507 3922 3.059597 CAGCATATTGCCGTTGCTACTAC 60.060 47.826 0.00 0.00 46.52 2.73
3508 3923 3.130633 CAGCATATTGCCGTTGCTACTA 58.869 45.455 0.00 0.00 46.52 1.82
3509 3924 1.942657 CAGCATATTGCCGTTGCTACT 59.057 47.619 0.00 0.00 46.52 2.57
3510 3925 1.597937 GCAGCATATTGCCGTTGCTAC 60.598 52.381 5.31 0.00 46.52 3.58
3511 3926 0.662619 GCAGCATATTGCCGTTGCTA 59.337 50.000 5.31 0.00 46.52 3.49
3512 3927 1.033746 AGCAGCATATTGCCGTTGCT 61.034 50.000 8.40 8.40 46.52 3.91
3513 3928 0.179129 AAGCAGCATATTGCCGTTGC 60.179 50.000 0.00 4.57 46.52 4.17
3514 3929 3.419264 TTAAGCAGCATATTGCCGTTG 57.581 42.857 0.00 0.00 46.52 4.10
3515 3930 4.654091 ATTTAAGCAGCATATTGCCGTT 57.346 36.364 0.00 0.00 46.52 4.44
3516 3931 4.654091 AATTTAAGCAGCATATTGCCGT 57.346 36.364 0.00 0.00 46.52 5.68
3517 3932 7.462109 TTTTAATTTAAGCAGCATATTGCCG 57.538 32.000 0.00 0.00 46.52 5.69
3518 3933 8.122330 GGTTTTTAATTTAAGCAGCATATTGCC 58.878 33.333 0.00 0.00 46.52 4.52
3519 3934 8.882736 AGGTTTTTAATTTAAGCAGCATATTGC 58.117 29.630 0.00 0.00 45.46 3.56
3522 3937 9.807649 CTGAGGTTTTTAATTTAAGCAGCATAT 57.192 29.630 0.00 0.00 0.00 1.78
3523 3938 8.250332 CCTGAGGTTTTTAATTTAAGCAGCATA 58.750 33.333 0.00 0.00 0.00 3.14
3524 3939 7.099120 CCTGAGGTTTTTAATTTAAGCAGCAT 58.901 34.615 0.00 0.00 0.00 3.79
3525 3940 6.454795 CCTGAGGTTTTTAATTTAAGCAGCA 58.545 36.000 0.00 0.00 0.00 4.41
3526 3941 5.348724 GCCTGAGGTTTTTAATTTAAGCAGC 59.651 40.000 0.00 0.00 0.00 5.25
3527 3942 5.869344 GGCCTGAGGTTTTTAATTTAAGCAG 59.131 40.000 0.00 0.00 0.00 4.24
3528 3943 5.305644 TGGCCTGAGGTTTTTAATTTAAGCA 59.694 36.000 3.32 0.00 0.00 3.91
3529 3944 5.637810 GTGGCCTGAGGTTTTTAATTTAAGC 59.362 40.000 3.32 0.00 0.00 3.09
3530 3945 6.754193 TGTGGCCTGAGGTTTTTAATTTAAG 58.246 36.000 3.32 0.00 0.00 1.85
3531 3946 6.732896 TGTGGCCTGAGGTTTTTAATTTAA 57.267 33.333 3.32 0.00 0.00 1.52
3532 3947 6.732896 TTGTGGCCTGAGGTTTTTAATTTA 57.267 33.333 3.32 0.00 0.00 1.40
3533 3948 5.610398 CTTGTGGCCTGAGGTTTTTAATTT 58.390 37.500 3.32 0.00 0.00 1.82
3534 3949 4.503123 GCTTGTGGCCTGAGGTTTTTAATT 60.503 41.667 3.32 0.00 34.27 1.40
3535 3950 3.006859 GCTTGTGGCCTGAGGTTTTTAAT 59.993 43.478 3.32 0.00 34.27 1.40
3536 3951 2.364002 GCTTGTGGCCTGAGGTTTTTAA 59.636 45.455 3.32 0.00 34.27 1.52
3537 3952 1.960689 GCTTGTGGCCTGAGGTTTTTA 59.039 47.619 3.32 0.00 34.27 1.52
3538 3953 0.752658 GCTTGTGGCCTGAGGTTTTT 59.247 50.000 3.32 0.00 34.27 1.94
3539 3954 0.396974 TGCTTGTGGCCTGAGGTTTT 60.397 50.000 3.32 0.00 40.92 2.43
3540 3955 0.825010 CTGCTTGTGGCCTGAGGTTT 60.825 55.000 3.32 0.00 40.92 3.27
3541 3956 1.228367 CTGCTTGTGGCCTGAGGTT 60.228 57.895 3.32 0.00 40.92 3.50
3542 3957 2.433446 CTGCTTGTGGCCTGAGGT 59.567 61.111 3.32 0.00 40.92 3.85
3543 3958 3.060615 GCTGCTTGTGGCCTGAGG 61.061 66.667 3.32 0.00 40.92 3.86
3544 3959 3.060615 GGCTGCTTGTGGCCTGAG 61.061 66.667 3.32 0.00 44.48 3.35
3551 3966 4.711949 AGGAGGCGGCTGCTTGTG 62.712 66.667 27.47 0.00 42.25 3.33
3552 3967 4.400961 GAGGAGGCGGCTGCTTGT 62.401 66.667 32.65 12.70 42.25 3.16
3557 3972 3.740495 TAGGAGGAGGAGGCGGCTG 62.740 68.421 19.63 0.00 0.00 4.85
3558 3973 3.430497 TAGGAGGAGGAGGCGGCT 61.430 66.667 13.09 13.09 0.00 5.52
3559 3974 3.228017 GTAGGAGGAGGAGGCGGC 61.228 72.222 0.00 0.00 0.00 6.53
3560 3975 1.381327 TTGTAGGAGGAGGAGGCGG 60.381 63.158 0.00 0.00 0.00 6.13
3561 3976 0.395862 TCTTGTAGGAGGAGGAGGCG 60.396 60.000 0.00 0.00 0.00 5.52
3562 3977 1.867363 TTCTTGTAGGAGGAGGAGGC 58.133 55.000 0.00 0.00 0.00 4.70
3563 3978 3.714144 TCTTTCTTGTAGGAGGAGGAGG 58.286 50.000 0.00 0.00 0.00 4.30
3564 3979 5.247337 ACTTTCTTTCTTGTAGGAGGAGGAG 59.753 44.000 0.00 0.00 0.00 3.69
3565 3980 5.155905 ACTTTCTTTCTTGTAGGAGGAGGA 58.844 41.667 0.00 0.00 0.00 3.71
3566 3981 5.491323 ACTTTCTTTCTTGTAGGAGGAGG 57.509 43.478 0.00 0.00 0.00 4.30
3567 3982 7.100409 CCTAACTTTCTTTCTTGTAGGAGGAG 58.900 42.308 0.00 0.00 0.00 3.69
3568 3983 6.013639 CCCTAACTTTCTTTCTTGTAGGAGGA 60.014 42.308 0.00 0.00 0.00 3.71
3569 3984 6.174049 CCCTAACTTTCTTTCTTGTAGGAGG 58.826 44.000 0.00 0.00 0.00 4.30
3570 3985 6.770542 ACCCTAACTTTCTTTCTTGTAGGAG 58.229 40.000 0.00 0.00 0.00 3.69
3571 3986 6.758806 ACCCTAACTTTCTTTCTTGTAGGA 57.241 37.500 0.00 0.00 0.00 2.94
3572 3987 6.147328 CGAACCCTAACTTTCTTTCTTGTAGG 59.853 42.308 0.00 0.00 0.00 3.18
3573 3988 6.704937 ACGAACCCTAACTTTCTTTCTTGTAG 59.295 38.462 0.00 0.00 0.00 2.74
3574 3989 6.480981 CACGAACCCTAACTTTCTTTCTTGTA 59.519 38.462 0.00 0.00 0.00 2.41
3575 3990 5.296035 CACGAACCCTAACTTTCTTTCTTGT 59.704 40.000 0.00 0.00 0.00 3.16
3576 3991 5.748592 CACGAACCCTAACTTTCTTTCTTG 58.251 41.667 0.00 0.00 0.00 3.02
3577 3992 4.275196 GCACGAACCCTAACTTTCTTTCTT 59.725 41.667 0.00 0.00 0.00 2.52
3578 3993 3.813724 GCACGAACCCTAACTTTCTTTCT 59.186 43.478 0.00 0.00 0.00 2.52
3579 3994 3.058432 GGCACGAACCCTAACTTTCTTTC 60.058 47.826 0.00 0.00 0.00 2.62
3580 3995 2.882761 GGCACGAACCCTAACTTTCTTT 59.117 45.455 0.00 0.00 0.00 2.52
3581 3996 2.105993 AGGCACGAACCCTAACTTTCTT 59.894 45.455 0.00 0.00 0.00 2.52
3582 3997 1.697982 AGGCACGAACCCTAACTTTCT 59.302 47.619 0.00 0.00 0.00 2.52
3583 3998 2.074576 GAGGCACGAACCCTAACTTTC 58.925 52.381 0.00 0.00 31.41 2.62
3584 3999 1.271217 GGAGGCACGAACCCTAACTTT 60.271 52.381 0.00 0.00 31.41 2.66
3585 4000 0.323957 GGAGGCACGAACCCTAACTT 59.676 55.000 0.00 0.00 31.41 2.66
3586 4001 1.551019 GGGAGGCACGAACCCTAACT 61.551 60.000 0.00 0.00 40.39 2.24
3587 4002 1.078637 GGGAGGCACGAACCCTAAC 60.079 63.158 0.00 0.00 40.39 2.34
3588 4003 2.652095 CGGGAGGCACGAACCCTAA 61.652 63.158 0.00 0.00 41.28 2.69
3589 4004 3.072468 CGGGAGGCACGAACCCTA 61.072 66.667 0.00 0.00 41.28 3.53
3613 4028 2.914289 GGAGATGGGGCAGACCAG 59.086 66.667 0.00 0.00 45.20 4.00
3614 4029 3.083349 CGGAGATGGGGCAGACCA 61.083 66.667 0.00 0.00 46.24 4.02
3615 4030 3.866582 CCGGAGATGGGGCAGACC 61.867 72.222 0.00 0.00 39.11 3.85
3616 4031 3.083997 ACCGGAGATGGGGCAGAC 61.084 66.667 9.46 0.00 0.00 3.51
3617 4032 3.083349 CACCGGAGATGGGGCAGA 61.083 66.667 9.46 0.00 0.00 4.26
3618 4033 4.181010 CCACCGGAGATGGGGCAG 62.181 72.222 9.46 0.00 0.00 4.85
3623 4038 2.445845 TAGGGCCACCGGAGATGG 60.446 66.667 9.46 6.89 43.47 3.51
3624 4039 2.511452 CCTAGGGCCACCGGAGATG 61.511 68.421 9.46 0.00 43.47 2.90
3625 4040 2.122813 CCTAGGGCCACCGGAGAT 60.123 66.667 9.46 0.00 43.47 2.75
3626 4041 4.475444 CCCTAGGGCCACCGGAGA 62.475 72.222 16.90 0.00 43.47 3.71
3636 4051 2.039405 ACCTCCATGGCCCTAGGG 60.039 66.667 24.89 24.89 40.22 3.53
3637 4052 3.125376 GCACCTCCATGGCCCTAGG 62.125 68.421 14.31 14.31 40.22 3.02
3638 4053 2.512896 GCACCTCCATGGCCCTAG 59.487 66.667 6.96 0.00 40.22 3.02
3639 4054 3.479203 CGCACCTCCATGGCCCTA 61.479 66.667 6.96 0.00 40.22 3.53
3644 4059 2.947938 GATCCACCGCACCTCCATGG 62.948 65.000 4.97 4.97 42.93 3.66
3645 4060 1.524621 GATCCACCGCACCTCCATG 60.525 63.158 0.00 0.00 0.00 3.66
3646 4061 2.746375 GGATCCACCGCACCTCCAT 61.746 63.158 6.95 0.00 0.00 3.41
3647 4062 3.399181 GGATCCACCGCACCTCCA 61.399 66.667 6.95 0.00 0.00 3.86
3648 4063 3.083997 AGGATCCACCGCACCTCC 61.084 66.667 15.82 0.00 44.74 4.30
3649 4064 2.187946 CAGGATCCACCGCACCTC 59.812 66.667 15.82 0.00 44.74 3.85
3650 4065 3.402681 CCAGGATCCACCGCACCT 61.403 66.667 15.82 0.00 44.74 4.00
3652 4067 3.918253 TTGCCAGGATCCACCGCAC 62.918 63.158 15.82 0.00 44.74 5.34
3653 4068 3.626996 CTTGCCAGGATCCACCGCA 62.627 63.158 15.82 14.99 44.74 5.69
3654 4069 2.825836 CTTGCCAGGATCCACCGC 60.826 66.667 15.82 12.41 44.74 5.68
3655 4070 2.124570 CCTTGCCAGGATCCACCG 60.125 66.667 15.82 1.33 44.19 4.94
3656 4071 2.276740 CCCTTGCCAGGATCCACC 59.723 66.667 15.82 1.73 44.19 4.61
3657 4072 2.440980 GCCCTTGCCAGGATCCAC 60.441 66.667 15.82 3.31 44.19 4.02
3703 4118 9.674068 ACAAACCCTAGCAAAATTAAAGAAAAA 57.326 25.926 0.00 0.00 0.00 1.94
3704 4119 9.103861 CACAAACCCTAGCAAAATTAAAGAAAA 57.896 29.630 0.00 0.00 0.00 2.29
3705 4120 8.261522 ACACAAACCCTAGCAAAATTAAAGAAA 58.738 29.630 0.00 0.00 0.00 2.52
3706 4121 7.787028 ACACAAACCCTAGCAAAATTAAAGAA 58.213 30.769 0.00 0.00 0.00 2.52
3707 4122 7.354751 ACACAAACCCTAGCAAAATTAAAGA 57.645 32.000 0.00 0.00 0.00 2.52
3708 4123 6.645003 GGACACAAACCCTAGCAAAATTAAAG 59.355 38.462 0.00 0.00 0.00 1.85
3709 4124 6.325286 AGGACACAAACCCTAGCAAAATTAAA 59.675 34.615 0.00 0.00 0.00 1.52
3710 4125 5.836358 AGGACACAAACCCTAGCAAAATTAA 59.164 36.000 0.00 0.00 0.00 1.40
3711 4126 5.242838 CAGGACACAAACCCTAGCAAAATTA 59.757 40.000 0.00 0.00 0.00 1.40
3712 4127 4.039124 CAGGACACAAACCCTAGCAAAATT 59.961 41.667 0.00 0.00 0.00 1.82
3713 4128 3.573967 CAGGACACAAACCCTAGCAAAAT 59.426 43.478 0.00 0.00 0.00 1.82
3714 4129 2.955660 CAGGACACAAACCCTAGCAAAA 59.044 45.455 0.00 0.00 0.00 2.44
3715 4130 2.582052 CAGGACACAAACCCTAGCAAA 58.418 47.619 0.00 0.00 0.00 3.68
3716 4131 1.817740 GCAGGACACAAACCCTAGCAA 60.818 52.381 0.00 0.00 31.50 3.91
3717 4132 0.250727 GCAGGACACAAACCCTAGCA 60.251 55.000 0.00 0.00 31.50 3.49
3718 4133 0.036875 AGCAGGACACAAACCCTAGC 59.963 55.000 0.00 0.00 0.00 3.42
3719 4134 1.347707 TGAGCAGGACACAAACCCTAG 59.652 52.381 0.00 0.00 0.00 3.02
3720 4135 1.347707 CTGAGCAGGACACAAACCCTA 59.652 52.381 0.00 0.00 0.00 3.53
3721 4136 0.109342 CTGAGCAGGACACAAACCCT 59.891 55.000 0.00 0.00 0.00 4.34
3722 4137 2.633860 CTGAGCAGGACACAAACCC 58.366 57.895 0.00 0.00 0.00 4.11
3733 4148 1.153667 GTCTCGCCTTCCTGAGCAG 60.154 63.158 0.00 0.00 32.20 4.24
3734 4149 2.973899 GTCTCGCCTTCCTGAGCA 59.026 61.111 0.00 0.00 32.20 4.26
3735 4150 2.202676 CGTCTCGCCTTCCTGAGC 60.203 66.667 0.00 0.00 32.20 4.26
3736 4151 2.492090 CCGTCTCGCCTTCCTGAG 59.508 66.667 0.00 0.00 0.00 3.35
3737 4152 3.760035 GCCGTCTCGCCTTCCTGA 61.760 66.667 0.00 0.00 0.00 3.86
3753 4168 4.760047 TCTTCAGGAAGCCGCCGC 62.760 66.667 4.15 0.00 38.28 6.53
3754 4169 2.176273 CATCTTCAGGAAGCCGCCG 61.176 63.158 4.15 0.00 38.28 6.46
3755 4170 1.821332 CCATCTTCAGGAAGCCGCC 60.821 63.158 4.15 0.00 38.28 6.13
3756 4171 0.392998 TTCCATCTTCAGGAAGCCGC 60.393 55.000 4.15 0.00 40.11 6.53
3757 4172 3.861341 TTCCATCTTCAGGAAGCCG 57.139 52.632 4.15 0.00 40.11 5.52
3762 4177 5.131142 GGAGACCTTTATTCCATCTTCAGGA 59.869 44.000 0.00 0.00 0.00 3.86
3763 4178 5.372373 GGAGACCTTTATTCCATCTTCAGG 58.628 45.833 0.00 0.00 0.00 3.86
3786 4201 4.271016 GAATGGGGGCTAGGCGGG 62.271 72.222 10.58 0.00 0.00 6.13
3787 4202 4.271016 GGAATGGGGGCTAGGCGG 62.271 72.222 10.58 0.00 0.00 6.13
3788 4203 4.626081 CGGAATGGGGGCTAGGCG 62.626 72.222 10.58 0.00 0.00 5.52
3789 4204 4.271016 CCGGAATGGGGGCTAGGC 62.271 72.222 8.00 8.00 0.00 3.93
3790 4205 4.271016 GCCGGAATGGGGGCTAGG 62.271 72.222 5.05 0.00 45.93 3.02
3799 4214 3.709880 TAGACGCACCGCCGGAATG 62.710 63.158 11.71 0.00 0.00 2.67
3800 4215 3.426117 CTAGACGCACCGCCGGAAT 62.426 63.158 11.71 0.00 0.00 3.01
3801 4216 4.124351 CTAGACGCACCGCCGGAA 62.124 66.667 11.71 0.00 0.00 4.30
3811 4226 1.201921 CCACAAAACGATGCTAGACGC 60.202 52.381 0.00 0.00 39.77 5.19
3812 4227 1.393539 CCCACAAAACGATGCTAGACG 59.606 52.381 0.00 0.00 0.00 4.18
3813 4228 1.130561 GCCCACAAAACGATGCTAGAC 59.869 52.381 0.00 0.00 0.00 2.59
3814 4229 1.448985 GCCCACAAAACGATGCTAGA 58.551 50.000 0.00 0.00 0.00 2.43
3815 4230 0.096976 CGCCCACAAAACGATGCTAG 59.903 55.000 0.00 0.00 0.00 3.42
3816 4231 0.604243 ACGCCCACAAAACGATGCTA 60.604 50.000 0.00 0.00 0.00 3.49
3817 4232 1.896660 ACGCCCACAAAACGATGCT 60.897 52.632 0.00 0.00 0.00 3.79
3818 4233 1.729131 CACGCCCACAAAACGATGC 60.729 57.895 0.00 0.00 0.00 3.91
3819 4234 0.660005 CACACGCCCACAAAACGATG 60.660 55.000 0.00 0.00 0.00 3.84
3820 4235 1.652012 CACACGCCCACAAAACGAT 59.348 52.632 0.00 0.00 0.00 3.73
3821 4236 2.473760 CCACACGCCCACAAAACGA 61.474 57.895 0.00 0.00 0.00 3.85
3822 4237 2.025441 CCACACGCCCACAAAACG 59.975 61.111 0.00 0.00 0.00 3.60
3823 4238 1.358759 CTCCACACGCCCACAAAAC 59.641 57.895 0.00 0.00 0.00 2.43
3824 4239 1.826054 CCTCCACACGCCCACAAAA 60.826 57.895 0.00 0.00 0.00 2.44
3825 4240 2.203280 CCTCCACACGCCCACAAA 60.203 61.111 0.00 0.00 0.00 2.83
3826 4241 3.484806 ACCTCCACACGCCCACAA 61.485 61.111 0.00 0.00 0.00 3.33
3827 4242 4.248842 CACCTCCACACGCCCACA 62.249 66.667 0.00 0.00 0.00 4.17
3828 4243 4.250305 ACACCTCCACACGCCCAC 62.250 66.667 0.00 0.00 0.00 4.61
3829 4244 4.248842 CACACCTCCACACGCCCA 62.249 66.667 0.00 0.00 0.00 5.36
3830 4245 4.250305 ACACACCTCCACACGCCC 62.250 66.667 0.00 0.00 0.00 6.13
3831 4246 2.665185 GACACACCTCCACACGCC 60.665 66.667 0.00 0.00 0.00 5.68
3832 4247 1.664965 GAGACACACCTCCACACGC 60.665 63.158 0.00 0.00 0.00 5.34
3833 4248 4.655527 GAGACACACCTCCACACG 57.344 61.111 0.00 0.00 0.00 4.49
3839 4254 1.608717 ATCTGCCGGAGACACACCTC 61.609 60.000 5.05 0.00 31.75 3.85
3840 4255 1.194781 AATCTGCCGGAGACACACCT 61.195 55.000 5.05 0.00 31.75 4.00
3841 4256 0.321653 AAATCTGCCGGAGACACACC 60.322 55.000 5.05 0.00 31.75 4.16
3842 4257 2.380084 TAAATCTGCCGGAGACACAC 57.620 50.000 5.05 0.00 31.75 3.82
3843 4258 2.766263 AGATAAATCTGCCGGAGACACA 59.234 45.455 5.05 0.00 35.42 3.72
3844 4259 3.460857 AGATAAATCTGCCGGAGACAC 57.539 47.619 5.05 0.00 35.42 3.67
3845 4260 4.191544 CAAAGATAAATCTGCCGGAGACA 58.808 43.478 5.05 0.00 37.19 3.41
3846 4261 3.561725 CCAAAGATAAATCTGCCGGAGAC 59.438 47.826 5.05 0.00 37.19 3.36
3847 4262 3.199946 ACCAAAGATAAATCTGCCGGAGA 59.800 43.478 5.05 5.76 37.19 3.71
3848 4263 3.313526 CACCAAAGATAAATCTGCCGGAG 59.686 47.826 5.05 0.00 37.19 4.63
3849 4264 3.278574 CACCAAAGATAAATCTGCCGGA 58.721 45.455 5.05 0.00 37.19 5.14
3850 4265 2.358898 CCACCAAAGATAAATCTGCCGG 59.641 50.000 0.00 0.00 37.19 6.13
3851 4266 3.278574 TCCACCAAAGATAAATCTGCCG 58.721 45.455 0.00 0.00 37.19 5.69
3852 4267 5.859205 AATCCACCAAAGATAAATCTGCC 57.141 39.130 0.00 0.00 37.19 4.85
3853 4268 5.521372 GCAAATCCACCAAAGATAAATCTGC 59.479 40.000 0.00 0.00 37.19 4.26
3854 4269 6.870769 AGCAAATCCACCAAAGATAAATCTG 58.129 36.000 0.00 0.00 37.19 2.90
3855 4270 6.183360 CGAGCAAATCCACCAAAGATAAATCT 60.183 38.462 0.00 0.00 39.22 2.40
3856 4271 5.973565 CGAGCAAATCCACCAAAGATAAATC 59.026 40.000 0.00 0.00 0.00 2.17
3857 4272 5.163519 CCGAGCAAATCCACCAAAGATAAAT 60.164 40.000 0.00 0.00 0.00 1.40
3858 4273 4.157656 CCGAGCAAATCCACCAAAGATAAA 59.842 41.667 0.00 0.00 0.00 1.40
3859 4274 3.694072 CCGAGCAAATCCACCAAAGATAA 59.306 43.478 0.00 0.00 0.00 1.75
3860 4275 3.054728 TCCGAGCAAATCCACCAAAGATA 60.055 43.478 0.00 0.00 0.00 1.98
3861 4276 2.094675 CCGAGCAAATCCACCAAAGAT 58.905 47.619 0.00 0.00 0.00 2.40
3862 4277 1.073125 TCCGAGCAAATCCACCAAAGA 59.927 47.619 0.00 0.00 0.00 2.52
3863 4278 1.533625 TCCGAGCAAATCCACCAAAG 58.466 50.000 0.00 0.00 0.00 2.77
3864 4279 2.091541 GATCCGAGCAAATCCACCAAA 58.908 47.619 0.00 0.00 0.00 3.28
3865 4280 1.281867 AGATCCGAGCAAATCCACCAA 59.718 47.619 0.00 0.00 0.00 3.67
3866 4281 0.911769 AGATCCGAGCAAATCCACCA 59.088 50.000 0.00 0.00 0.00 4.17
3867 4282 1.587547 GAGATCCGAGCAAATCCACC 58.412 55.000 0.00 0.00 0.00 4.61
3868 4283 1.212616 CGAGATCCGAGCAAATCCAC 58.787 55.000 0.00 0.00 41.76 4.02
3869 4284 0.824109 ACGAGATCCGAGCAAATCCA 59.176 50.000 10.05 0.00 41.76 3.41
3870 4285 1.492720 GACGAGATCCGAGCAAATCC 58.507 55.000 10.05 0.00 41.76 3.01
3871 4286 1.124462 CGACGAGATCCGAGCAAATC 58.876 55.000 10.05 0.00 41.76 2.17
3872 4287 0.456221 ACGACGAGATCCGAGCAAAT 59.544 50.000 0.00 0.00 41.76 2.32
3873 4288 0.179171 GACGACGAGATCCGAGCAAA 60.179 55.000 0.00 0.00 41.76 3.68
3874 4289 1.428219 GACGACGAGATCCGAGCAA 59.572 57.895 0.00 0.00 41.76 3.91
3875 4290 2.810012 CGACGACGAGATCCGAGCA 61.810 63.158 0.00 0.00 42.66 4.26
3876 4291 2.052941 CGACGACGAGATCCGAGC 60.053 66.667 0.00 2.24 42.66 5.03
3877 4292 0.586748 CAACGACGACGAGATCCGAG 60.587 60.000 15.32 6.49 42.66 4.63
3878 4293 1.293963 ACAACGACGACGAGATCCGA 61.294 55.000 15.32 0.00 42.66 4.55
3879 4294 0.453950 AACAACGACGACGAGATCCG 60.454 55.000 15.32 2.55 42.66 4.18
3880 4295 1.257539 GAACAACGACGACGAGATCC 58.742 55.000 15.32 0.00 42.66 3.36
3881 4296 0.899232 CGAACAACGACGACGAGATC 59.101 55.000 15.32 9.08 45.77 2.75
3882 4297 2.997345 CGAACAACGACGACGAGAT 58.003 52.632 15.32 0.62 45.77 2.75
3883 4298 4.502335 CGAACAACGACGACGAGA 57.498 55.556 15.32 0.00 45.77 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.