Multiple sequence alignment - TraesCS4D01G310700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G310700 chr4D 100.000 5839 0 0 1 5839 477631151 477625313 0.000000e+00 10783
1 TraesCS4D01G310700 chr4D 93.059 461 28 4 1 458 84283807 84284266 0.000000e+00 671
2 TraesCS4D01G310700 chr4D 86.913 298 32 5 2850 3145 477628206 477627914 1.570000e-85 327
3 TraesCS4D01G310700 chr4D 86.913 298 32 5 2946 3238 477628302 477628007 1.570000e-85 327
4 TraesCS4D01G310700 chr4D 77.731 476 78 15 2377 2829 477582441 477581971 3.470000e-67 267
5 TraesCS4D01G310700 chr4D 92.366 131 10 0 3784 3914 477580776 477580646 2.780000e-43 187
6 TraesCS4D01G310700 chr4B 93.596 2686 155 12 463 3145 603190124 603187453 0.000000e+00 3991
7 TraesCS4D01G310700 chr4B 93.088 1794 98 14 2946 4723 603187748 603185965 0.000000e+00 2603
8 TraesCS4D01G310700 chr4B 85.286 367 41 4 5111 5468 603185965 603185603 3.320000e-97 366
9 TraesCS4D01G310700 chr4B 90.435 230 19 3 5507 5735 603185603 603185376 3.420000e-77 300
10 TraesCS4D01G310700 chr4B 74.545 715 127 31 2382 3043 603168897 603168185 1.610000e-65 261
11 TraesCS4D01G310700 chr4B 92.366 131 10 0 3784 3914 603167581 603167451 2.780000e-43 187
12 TraesCS4D01G310700 chr4B 84.865 185 22 5 2097 2276 603169146 603168963 1.290000e-41 182
13 TraesCS4D01G310700 chr4B 84.112 107 17 0 2593 2699 603186083 603185977 2.880000e-18 104
14 TraesCS4D01G310700 chr4A 88.865 1868 175 21 1289 3145 684517889 684516044 0.000000e+00 2266
15 TraesCS4D01G310700 chr4A 90.775 1149 76 13 3716 4863 684515810 684514691 0.000000e+00 1507
16 TraesCS4D01G310700 chr4A 83.574 968 91 23 493 1453 684518469 684517563 0.000000e+00 845
17 TraesCS4D01G310700 chr4A 91.902 531 40 1 2946 3473 684516339 684515809 0.000000e+00 739
18 TraesCS4D01G310700 chr4A 88.717 452 30 6 5398 5839 684514317 684513877 3.100000e-147 532
19 TraesCS4D01G310700 chr4A 85.714 273 34 2 5098 5369 684514585 684514317 3.440000e-72 283
20 TraesCS4D01G310700 chr4A 79.245 371 56 10 2868 3238 684516486 684516137 7.560000e-59 239
21 TraesCS4D01G310700 chr4A 82.178 202 28 7 2105 2299 684506758 684506558 3.620000e-37 167
22 TraesCS4D01G310700 chr4A 91.667 120 9 1 3784 3903 684505331 684505213 1.300000e-36 165
23 TraesCS4D01G310700 chr1D 94.143 461 24 3 1 460 10211331 10210873 0.000000e+00 699
24 TraesCS4D01G310700 chr1D 93.043 460 30 2 1 458 474919857 474919398 0.000000e+00 671
25 TraesCS4D01G310700 chr7D 93.275 461 28 3 1 458 423347325 423347785 0.000000e+00 676
26 TraesCS4D01G310700 chr6D 93.275 461 27 4 1 458 7038905 7039364 0.000000e+00 676
27 TraesCS4D01G310700 chr2D 93.103 464 28 4 1 461 493170671 493170209 0.000000e+00 676
28 TraesCS4D01G310700 chr3D 93.089 463 25 4 1 460 520451964 520451506 0.000000e+00 671
29 TraesCS4D01G310700 chr3D 92.457 464 33 2 1 462 426841573 426841110 0.000000e+00 662
30 TraesCS4D01G310700 chr5D 92.457 464 33 2 1 462 192547676 192547213 0.000000e+00 662
31 TraesCS4D01G310700 chr5D 80.462 476 73 13 2377 2833 94027363 94026889 4.330000e-91 346
32 TraesCS4D01G310700 chr5D 76.776 366 69 4 4235 4597 94025875 94025523 2.150000e-44 191
33 TraesCS4D01G310700 chr5D 77.091 275 40 13 2005 2276 94027677 94027423 2.840000e-28 137
34 TraesCS4D01G310700 chr5D 85.088 114 17 0 3786 3899 449851820 449851707 3.700000e-22 117
35 TraesCS4D01G310700 chr5A 77.536 276 38 15 2005 2276 87934244 87933989 1.700000e-30 145
36 TraesCS4D01G310700 chr5A 78.112 233 40 8 2868 3096 87933307 87933082 2.840000e-28 137
37 TraesCS4D01G310700 chr5A 86.207 116 16 0 3781 3896 569075063 569074948 6.140000e-25 126
38 TraesCS4D01G310700 chr5B 84.127 126 18 1 3781 3904 549674265 549674140 2.860000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G310700 chr4D 477625313 477631151 5838 True 3812.333333 10783 91.275333 1 5839 3 chr4D.!!$R2 5838
1 TraesCS4D01G310700 chr4D 477580646 477582441 1795 True 227.000000 267 85.048500 2377 3914 2 chr4D.!!$R1 1537
2 TraesCS4D01G310700 chr4B 603185376 603190124 4748 True 1472.800000 3991 89.303400 463 5735 5 chr4B.!!$R2 5272
3 TraesCS4D01G310700 chr4B 603167451 603169146 1695 True 210.000000 261 83.925333 2097 3914 3 chr4B.!!$R1 1817
4 TraesCS4D01G310700 chr4A 684513877 684518469 4592 True 915.857143 2266 86.970286 493 5839 7 chr4A.!!$R2 5346
5 TraesCS4D01G310700 chr5D 94025523 94027677 2154 True 224.666667 346 78.109667 2005 4597 3 chr5D.!!$R3 2592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.033504 GGCGGCGAGAAATATGGAGA 59.966 55.0 12.98 0.00 0.00 3.71 F
701 706 0.046397 ATCCCTCTAAACCCCCAGCT 59.954 55.0 0.00 0.00 0.00 4.24 F
1404 1410 0.169009 GGGAGCTGCGTTTTGATGAC 59.831 55.0 0.00 0.00 0.00 3.06 F
2582 2671 0.320683 CCAGCAATGGTGTCACTCGA 60.321 55.0 11.69 0.00 0.00 4.04 F
3118 3228 0.250209 AGAGCCAACTGTCAGTGCAG 60.250 55.0 15.48 11.51 41.92 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1655 1712 0.094901 ATCGTCGTCGTCGTCTTCAG 59.905 55.0 11.41 0.0 38.33 3.02 R
1756 1813 0.815095 TTCTCCGCGACTATCTGCAA 59.185 50.0 8.23 0.0 0.00 4.08 R
3099 3209 0.250209 CTGCACTGACAGTTGGCTCT 60.250 55.0 16.33 0.0 32.78 4.09 R
4559 5221 0.178992 CCCTTGCAACCTTCACTCCA 60.179 55.0 0.00 0.0 0.00 3.86 R
4956 5618 0.034089 GGCAAGGGAGTATGGTGCTT 60.034 55.0 0.00 0.0 35.53 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.479269 GTCTCGCGGCGGTTGAAG 61.479 66.667 23.46 12.07 0.00 3.02
26 27 3.982372 CTCGCGGCGGTTGAAGCTA 62.982 63.158 23.46 0.00 34.52 3.32
27 28 3.554692 CGCGGCGGTTGAAGCTAG 61.555 66.667 15.84 0.00 34.52 3.42
28 29 3.865830 GCGGCGGTTGAAGCTAGC 61.866 66.667 9.78 6.62 34.52 3.42
29 30 3.195698 CGGCGGTTGAAGCTAGCC 61.196 66.667 12.13 3.63 44.00 3.93
30 31 3.195698 GGCGGTTGAAGCTAGCCG 61.196 66.667 12.13 7.36 45.71 5.52
31 32 3.195698 GCGGTTGAAGCTAGCCGG 61.196 66.667 12.13 0.00 43.54 6.13
32 33 3.195698 CGGTTGAAGCTAGCCGGC 61.196 66.667 21.89 21.89 40.25 6.13
33 34 3.195698 GGTTGAAGCTAGCCGGCG 61.196 66.667 23.20 9.22 37.29 6.46
34 35 3.865830 GTTGAAGCTAGCCGGCGC 61.866 66.667 23.20 20.04 37.29 6.53
49 50 3.186047 CGCGACATCCCGTGGTTC 61.186 66.667 0.00 0.00 36.51 3.62
50 51 3.186047 GCGACATCCCGTGGTTCG 61.186 66.667 0.00 0.00 39.52 3.95
51 52 2.260434 CGACATCCCGTGGTTCGT 59.740 61.111 0.00 0.00 37.94 3.85
52 53 1.804326 CGACATCCCGTGGTTCGTC 60.804 63.158 0.00 0.00 37.94 4.20
53 54 1.447314 GACATCCCGTGGTTCGTCC 60.447 63.158 0.00 0.00 37.94 4.79
54 55 2.162338 GACATCCCGTGGTTCGTCCA 62.162 60.000 0.00 0.00 45.01 4.02
61 62 2.738480 TGGTTCGTCCACTTCCGG 59.262 61.111 0.00 0.00 41.93 5.14
62 63 2.047560 GGTTCGTCCACTTCCGGG 60.048 66.667 0.00 0.00 35.97 5.73
63 64 2.741211 GTTCGTCCACTTCCGGGC 60.741 66.667 0.00 0.00 0.00 6.13
122 123 3.462678 GCTCCGGGTCCCTCTCAC 61.463 72.222 6.29 0.00 0.00 3.51
123 124 3.141488 CTCCGGGTCCCTCTCACG 61.141 72.222 6.29 0.00 0.00 4.35
124 125 4.753662 TCCGGGTCCCTCTCACGG 62.754 72.222 6.29 0.57 45.52 4.94
130 131 4.458829 TCCCTCTCACGGCCGGAT 62.459 66.667 31.76 6.18 0.00 4.18
131 132 3.917760 CCCTCTCACGGCCGGATC 61.918 72.222 31.76 0.00 0.00 3.36
132 133 2.835431 CCTCTCACGGCCGGATCT 60.835 66.667 31.76 4.77 0.00 2.75
133 134 2.415010 CTCTCACGGCCGGATCTG 59.585 66.667 31.76 18.91 0.00 2.90
134 135 3.781770 CTCTCACGGCCGGATCTGC 62.782 68.421 31.76 0.00 0.00 4.26
135 136 3.842923 CTCACGGCCGGATCTGCT 61.843 66.667 31.76 2.42 0.00 4.24
136 137 4.147449 TCACGGCCGGATCTGCTG 62.147 66.667 31.76 16.88 40.98 4.41
162 163 4.148825 GCGTCCGGAGCTCCACAT 62.149 66.667 31.67 0.00 35.14 3.21
163 164 2.579201 CGTCCGGAGCTCCACATT 59.421 61.111 31.67 0.00 35.14 2.71
164 165 1.519455 CGTCCGGAGCTCCACATTC 60.519 63.158 31.67 15.25 35.14 2.67
165 166 1.519455 GTCCGGAGCTCCACATTCG 60.519 63.158 31.67 16.32 35.14 3.34
166 167 2.202932 CCGGAGCTCCACATTCGG 60.203 66.667 31.67 21.20 35.14 4.30
167 168 2.892425 CGGAGCTCCACATTCGGC 60.892 66.667 31.67 2.06 35.14 5.54
168 169 2.514824 GGAGCTCCACATTCGGCC 60.515 66.667 28.43 0.00 35.64 6.13
169 170 2.514824 GAGCTCCACATTCGGCCC 60.515 66.667 0.87 0.00 0.00 5.80
170 171 4.115199 AGCTCCACATTCGGCCCC 62.115 66.667 0.00 0.00 0.00 5.80
171 172 4.424711 GCTCCACATTCGGCCCCA 62.425 66.667 0.00 0.00 0.00 4.96
172 173 2.438434 CTCCACATTCGGCCCCAC 60.438 66.667 0.00 0.00 0.00 4.61
173 174 3.253061 TCCACATTCGGCCCCACA 61.253 61.111 0.00 0.00 0.00 4.17
174 175 2.044053 CCACATTCGGCCCCACAT 60.044 61.111 0.00 0.00 0.00 3.21
175 176 2.417257 CCACATTCGGCCCCACATG 61.417 63.158 0.00 0.00 0.00 3.21
176 177 2.044053 ACATTCGGCCCCACATGG 60.044 61.111 0.00 0.00 0.00 3.66
218 219 2.665185 GCCGGCGGCGAGAAATAT 60.665 61.111 37.09 0.00 39.62 1.28
219 220 2.954753 GCCGGCGGCGAGAAATATG 61.955 63.158 37.09 14.37 39.62 1.78
220 221 2.317609 CCGGCGGCGAGAAATATGG 61.318 63.158 34.49 8.65 0.00 2.74
221 222 1.300620 CGGCGGCGAGAAATATGGA 60.301 57.895 29.19 0.00 0.00 3.41
222 223 1.284982 CGGCGGCGAGAAATATGGAG 61.285 60.000 29.19 0.00 0.00 3.86
223 224 0.033504 GGCGGCGAGAAATATGGAGA 59.966 55.000 12.98 0.00 0.00 3.71
224 225 1.423395 GCGGCGAGAAATATGGAGAG 58.577 55.000 12.98 0.00 0.00 3.20
225 226 1.937108 GCGGCGAGAAATATGGAGAGG 60.937 57.143 12.98 0.00 0.00 3.69
226 227 1.337260 CGGCGAGAAATATGGAGAGGG 60.337 57.143 0.00 0.00 0.00 4.30
227 228 1.971357 GGCGAGAAATATGGAGAGGGA 59.029 52.381 0.00 0.00 0.00 4.20
228 229 2.368875 GGCGAGAAATATGGAGAGGGAA 59.631 50.000 0.00 0.00 0.00 3.97
229 230 3.181454 GGCGAGAAATATGGAGAGGGAAA 60.181 47.826 0.00 0.00 0.00 3.13
230 231 4.061596 GCGAGAAATATGGAGAGGGAAAG 58.938 47.826 0.00 0.00 0.00 2.62
231 232 4.636249 CGAGAAATATGGAGAGGGAAAGG 58.364 47.826 0.00 0.00 0.00 3.11
232 233 4.503991 CGAGAAATATGGAGAGGGAAAGGG 60.504 50.000 0.00 0.00 0.00 3.95
233 234 3.724209 AGAAATATGGAGAGGGAAAGGGG 59.276 47.826 0.00 0.00 0.00 4.79
234 235 3.455085 AATATGGAGAGGGAAAGGGGA 57.545 47.619 0.00 0.00 0.00 4.81
235 236 2.982842 TATGGAGAGGGAAAGGGGAA 57.017 50.000 0.00 0.00 0.00 3.97
236 237 2.310413 ATGGAGAGGGAAAGGGGAAT 57.690 50.000 0.00 0.00 0.00 3.01
237 238 1.596496 TGGAGAGGGAAAGGGGAATC 58.404 55.000 0.00 0.00 0.00 2.52
238 239 0.470341 GGAGAGGGAAAGGGGAATCG 59.530 60.000 0.00 0.00 0.00 3.34
239 240 0.470341 GAGAGGGAAAGGGGAATCGG 59.530 60.000 0.00 0.00 0.00 4.18
240 241 0.988678 AGAGGGAAAGGGGAATCGGG 60.989 60.000 0.00 0.00 0.00 5.14
241 242 1.230182 AGGGAAAGGGGAATCGGGT 60.230 57.895 0.00 0.00 0.00 5.28
242 243 1.076995 GGGAAAGGGGAATCGGGTG 60.077 63.158 0.00 0.00 0.00 4.61
243 244 1.076995 GGAAAGGGGAATCGGGTGG 60.077 63.158 0.00 0.00 0.00 4.61
244 245 1.753078 GAAAGGGGAATCGGGTGGC 60.753 63.158 0.00 0.00 0.00 5.01
245 246 2.211468 GAAAGGGGAATCGGGTGGCT 62.211 60.000 0.00 0.00 0.00 4.75
246 247 2.211468 AAAGGGGAATCGGGTGGCTC 62.211 60.000 0.00 0.00 0.00 4.70
247 248 4.547367 GGGGAATCGGGTGGCTCG 62.547 72.222 0.00 0.00 0.00 5.03
268 269 3.485745 CGGCGGGGGATAGGGTTT 61.486 66.667 0.00 0.00 0.00 3.27
269 270 2.194868 GGCGGGGGATAGGGTTTG 59.805 66.667 0.00 0.00 0.00 2.93
270 271 2.194868 GCGGGGGATAGGGTTTGG 59.805 66.667 0.00 0.00 0.00 3.28
271 272 2.380285 GCGGGGGATAGGGTTTGGA 61.380 63.158 0.00 0.00 0.00 3.53
272 273 1.530283 CGGGGGATAGGGTTTGGAC 59.470 63.158 0.00 0.00 0.00 4.02
273 274 1.928199 GGGGGATAGGGTTTGGACC 59.072 63.158 0.00 0.00 45.75 4.46
282 283 1.365999 GGTTTGGACCCGCAAAAGG 59.634 57.895 0.00 0.00 40.25 3.11
291 292 3.350612 CGCAAAAGGGTCGCGGAA 61.351 61.111 6.13 0.00 45.08 4.30
292 293 2.686816 CGCAAAAGGGTCGCGGAAT 61.687 57.895 6.13 0.00 45.08 3.01
293 294 1.136774 GCAAAAGGGTCGCGGAATC 59.863 57.895 6.13 0.00 0.00 2.52
294 295 1.423845 CAAAAGGGTCGCGGAATCG 59.576 57.895 6.13 0.00 39.81 3.34
307 308 2.743938 CGGAATCGCAGTTATAGTGCT 58.256 47.619 5.11 0.00 42.22 4.40
308 309 2.726760 CGGAATCGCAGTTATAGTGCTC 59.273 50.000 5.11 0.00 42.22 4.26
309 310 2.726760 GGAATCGCAGTTATAGTGCTCG 59.273 50.000 5.11 0.00 42.22 5.03
310 311 2.423926 ATCGCAGTTATAGTGCTCGG 57.576 50.000 5.11 0.00 42.22 4.63
311 312 0.384309 TCGCAGTTATAGTGCTCGGG 59.616 55.000 5.11 0.00 42.22 5.14
312 313 0.597637 CGCAGTTATAGTGCTCGGGG 60.598 60.000 5.11 0.00 42.22 5.73
313 314 0.880718 GCAGTTATAGTGCTCGGGGC 60.881 60.000 0.00 0.00 41.22 5.80
314 315 0.597637 CAGTTATAGTGCTCGGGGCG 60.598 60.000 0.00 0.00 45.43 6.13
315 316 1.041447 AGTTATAGTGCTCGGGGCGT 61.041 55.000 0.00 0.00 45.43 5.68
316 317 0.874607 GTTATAGTGCTCGGGGCGTG 60.875 60.000 0.00 0.00 45.43 5.34
317 318 2.638330 TTATAGTGCTCGGGGCGTGC 62.638 60.000 0.00 0.00 44.82 5.34
340 341 4.740431 GCGGGCTGCGGCAAAAAT 62.740 61.111 21.31 0.00 40.87 1.82
341 342 2.048316 CGGGCTGCGGCAAAAATT 60.048 55.556 21.31 0.00 40.87 1.82
342 343 1.667510 CGGGCTGCGGCAAAAATTT 60.668 52.632 21.31 0.00 40.87 1.82
343 344 1.227342 CGGGCTGCGGCAAAAATTTT 61.227 50.000 21.31 0.00 40.87 1.82
344 345 0.950836 GGGCTGCGGCAAAAATTTTT 59.049 45.000 21.31 10.41 40.87 1.94
352 353 3.744198 CAAAAATTTTTGCGGGCCG 57.256 47.368 26.05 24.35 40.76 6.13
353 354 0.236973 CAAAAATTTTTGCGGGCCGG 59.763 50.000 29.48 9.71 40.76 6.13
354 355 0.886938 AAAAATTTTTGCGGGCCGGG 60.887 50.000 29.48 0.00 0.00 5.73
355 356 3.892740 AAATTTTTGCGGGCCGGGC 62.893 57.895 29.48 22.00 0.00 6.13
372 373 2.460330 GCAAGTATGCGTGCTCTGT 58.540 52.632 13.98 0.00 44.68 3.41
373 374 0.798776 GCAAGTATGCGTGCTCTGTT 59.201 50.000 13.98 0.00 44.68 3.16
374 375 1.201965 GCAAGTATGCGTGCTCTGTTC 60.202 52.381 13.98 0.00 44.68 3.18
375 376 2.341257 CAAGTATGCGTGCTCTGTTCT 58.659 47.619 0.00 0.00 0.00 3.01
376 377 2.001812 AGTATGCGTGCTCTGTTCTG 57.998 50.000 0.00 0.00 0.00 3.02
377 378 1.002366 GTATGCGTGCTCTGTTCTGG 58.998 55.000 0.00 0.00 0.00 3.86
378 379 0.740868 TATGCGTGCTCTGTTCTGGC 60.741 55.000 0.00 0.00 0.00 4.85
379 380 2.358003 GCGTGCTCTGTTCTGGCT 60.358 61.111 0.00 0.00 0.00 4.75
380 381 1.079819 GCGTGCTCTGTTCTGGCTA 60.080 57.895 0.00 0.00 0.00 3.93
381 382 1.080995 GCGTGCTCTGTTCTGGCTAG 61.081 60.000 0.00 0.00 0.00 3.42
382 383 0.528017 CGTGCTCTGTTCTGGCTAGA 59.472 55.000 0.00 0.00 0.00 2.43
383 384 1.067565 CGTGCTCTGTTCTGGCTAGAA 60.068 52.381 8.66 8.66 40.53 2.10
384 385 2.610479 CGTGCTCTGTTCTGGCTAGAAA 60.610 50.000 14.73 4.53 44.12 2.52
385 386 3.403038 GTGCTCTGTTCTGGCTAGAAAA 58.597 45.455 14.73 8.41 44.12 2.29
386 387 4.006319 GTGCTCTGTTCTGGCTAGAAAAT 58.994 43.478 14.73 0.00 44.12 1.82
387 388 4.457257 GTGCTCTGTTCTGGCTAGAAAATT 59.543 41.667 14.73 0.00 44.12 1.82
388 389 4.456911 TGCTCTGTTCTGGCTAGAAAATTG 59.543 41.667 14.73 6.11 44.12 2.32
389 390 4.142513 GCTCTGTTCTGGCTAGAAAATTGG 60.143 45.833 14.73 5.56 44.12 3.16
390 391 4.335416 TCTGTTCTGGCTAGAAAATTGGG 58.665 43.478 14.73 0.00 44.12 4.12
391 392 2.825532 TGTTCTGGCTAGAAAATTGGGC 59.174 45.455 14.73 0.82 44.12 5.36
392 393 2.143876 TCTGGCTAGAAAATTGGGCC 57.856 50.000 0.00 0.00 42.73 5.80
393 394 0.740737 CTGGCTAGAAAATTGGGCCG 59.259 55.000 0.00 0.00 45.06 6.13
394 395 0.329931 TGGCTAGAAAATTGGGCCGA 59.670 50.000 0.00 0.00 45.06 5.54
395 396 1.025041 GGCTAGAAAATTGGGCCGAG 58.975 55.000 0.00 0.00 33.30 4.63
396 397 1.025041 GCTAGAAAATTGGGCCGAGG 58.975 55.000 0.00 0.00 0.00 4.63
397 398 1.025041 CTAGAAAATTGGGCCGAGGC 58.975 55.000 5.37 5.37 41.06 4.70
407 408 3.414700 GCCGAGGCCGCATATTCG 61.415 66.667 7.44 4.95 34.56 3.34
408 409 3.414700 CCGAGGCCGCATATTCGC 61.415 66.667 7.44 0.00 0.00 4.70
409 410 3.414700 CGAGGCCGCATATTCGCC 61.415 66.667 7.44 0.00 0.00 5.54
410 411 3.414700 GAGGCCGCATATTCGCCG 61.415 66.667 0.00 0.00 33.22 6.46
411 412 4.988598 AGGCCGCATATTCGCCGG 62.989 66.667 0.00 0.00 44.58 6.13
412 413 4.980805 GGCCGCATATTCGCCGGA 62.981 66.667 5.05 0.00 44.55 5.14
413 414 2.970324 GCCGCATATTCGCCGGAA 60.970 61.111 5.05 0.00 44.55 4.30
414 415 2.325082 GCCGCATATTCGCCGGAAT 61.325 57.895 5.05 0.00 44.55 3.01
415 416 1.852067 GCCGCATATTCGCCGGAATT 61.852 55.000 5.05 0.00 44.55 2.17
416 417 0.591170 CCGCATATTCGCCGGAATTT 59.409 50.000 5.05 0.00 44.55 1.82
417 418 1.001815 CCGCATATTCGCCGGAATTTT 60.002 47.619 5.05 0.00 44.55 1.82
418 419 2.542824 CCGCATATTCGCCGGAATTTTT 60.543 45.455 5.05 0.00 44.55 1.94
419 420 2.467305 CGCATATTCGCCGGAATTTTTG 59.533 45.455 5.05 0.00 42.71 2.44
420 421 2.218530 GCATATTCGCCGGAATTTTTGC 59.781 45.455 5.05 2.98 42.71 3.68
428 429 3.694889 GGAATTTTTGCGAGACGGG 57.305 52.632 0.00 0.00 0.00 5.28
429 430 0.456142 GGAATTTTTGCGAGACGGGC 60.456 55.000 0.00 0.00 0.00 6.13
430 431 0.793104 GAATTTTTGCGAGACGGGCG 60.793 55.000 0.00 0.00 0.00 6.13
431 432 1.512156 AATTTTTGCGAGACGGGCGT 61.512 50.000 0.00 0.00 0.00 5.68
432 433 1.512156 ATTTTTGCGAGACGGGCGTT 61.512 50.000 0.00 0.00 0.00 4.84
433 434 1.716826 TTTTTGCGAGACGGGCGTTT 61.717 50.000 0.00 0.00 0.00 3.60
434 435 1.716826 TTTTGCGAGACGGGCGTTTT 61.717 50.000 0.00 0.00 0.00 2.43
435 436 0.879400 TTTGCGAGACGGGCGTTTTA 60.879 50.000 0.00 0.00 0.00 1.52
436 437 1.559149 TTGCGAGACGGGCGTTTTAC 61.559 55.000 0.00 0.00 0.00 2.01
437 438 1.735559 GCGAGACGGGCGTTTTACT 60.736 57.895 0.00 0.00 0.00 2.24
438 439 0.456653 GCGAGACGGGCGTTTTACTA 60.457 55.000 0.00 0.00 0.00 1.82
439 440 1.542544 CGAGACGGGCGTTTTACTAG 58.457 55.000 0.00 0.00 0.00 2.57
440 441 1.796617 CGAGACGGGCGTTTTACTAGG 60.797 57.143 0.00 0.00 0.00 3.02
441 442 1.203287 GAGACGGGCGTTTTACTAGGT 59.797 52.381 0.00 0.00 0.00 3.08
442 443 1.203287 AGACGGGCGTTTTACTAGGTC 59.797 52.381 0.00 0.00 0.00 3.85
443 444 1.203287 GACGGGCGTTTTACTAGGTCT 59.797 52.381 0.00 0.00 0.00 3.85
444 445 1.067354 ACGGGCGTTTTACTAGGTCTG 60.067 52.381 0.00 0.00 0.00 3.51
445 446 1.366679 GGGCGTTTTACTAGGTCTGC 58.633 55.000 0.00 0.00 0.00 4.26
446 447 1.066358 GGGCGTTTTACTAGGTCTGCT 60.066 52.381 0.00 0.00 0.00 4.24
447 448 2.167075 GGGCGTTTTACTAGGTCTGCTA 59.833 50.000 0.00 0.00 0.00 3.49
448 449 3.445857 GGCGTTTTACTAGGTCTGCTAG 58.554 50.000 0.00 0.00 0.00 3.42
449 450 3.129988 GGCGTTTTACTAGGTCTGCTAGA 59.870 47.826 0.00 0.00 0.00 2.43
450 451 4.352887 GCGTTTTACTAGGTCTGCTAGAG 58.647 47.826 0.00 0.00 0.00 2.43
451 452 4.142425 GCGTTTTACTAGGTCTGCTAGAGT 60.142 45.833 0.00 0.00 0.00 3.24
452 453 5.621781 GCGTTTTACTAGGTCTGCTAGAGTT 60.622 44.000 0.00 0.00 0.00 3.01
453 454 5.800941 CGTTTTACTAGGTCTGCTAGAGTTG 59.199 44.000 0.00 0.00 0.00 3.16
454 455 4.985538 TTACTAGGTCTGCTAGAGTTGC 57.014 45.455 0.00 0.00 0.00 4.17
455 456 3.094484 ACTAGGTCTGCTAGAGTTGCT 57.906 47.619 0.00 0.00 0.00 3.91
456 457 3.020984 ACTAGGTCTGCTAGAGTTGCTC 58.979 50.000 0.00 0.00 0.00 4.26
457 458 2.230130 AGGTCTGCTAGAGTTGCTCT 57.770 50.000 4.02 4.02 43.83 4.09
458 459 2.534990 AGGTCTGCTAGAGTTGCTCTT 58.465 47.619 3.87 0.00 41.50 2.85
459 460 3.702792 AGGTCTGCTAGAGTTGCTCTTA 58.297 45.455 3.87 0.00 41.50 2.10
460 461 3.699038 AGGTCTGCTAGAGTTGCTCTTAG 59.301 47.826 3.87 2.21 41.50 2.18
461 462 3.443976 GTCTGCTAGAGTTGCTCTTAGC 58.556 50.000 3.87 10.83 41.50 3.09
589 593 1.388547 CTTCGTCCTCCTCCTCTCTG 58.611 60.000 0.00 0.00 0.00 3.35
701 706 0.046397 ATCCCTCTAAACCCCCAGCT 59.954 55.000 0.00 0.00 0.00 4.24
835 841 3.947612 ATCTTACCGGGAGTCAGTCTA 57.052 47.619 6.32 0.00 0.00 2.59
927 933 1.277842 TCGGTAAGAAGCCATTGAGCA 59.722 47.619 0.00 0.00 34.23 4.26
966 972 4.754667 GTGGTCCCGGAGCCGTTC 62.755 72.222 14.10 0.00 37.81 3.95
1155 1161 1.203237 AGTTCTTCTCAGGCTGGGAGA 60.203 52.381 17.95 13.95 39.53 3.71
1185 1191 1.739562 GCGGGATGCGGAGATCATC 60.740 63.158 0.00 0.00 39.56 2.92
1227 1233 3.402681 GTGGCCAGGGAGCTGCTA 61.403 66.667 5.11 0.00 0.00 3.49
1242 1248 7.041107 GGGAGCTGCTATTCTCTTATTATCAG 58.959 42.308 0.15 0.00 0.00 2.90
1310 1316 1.651138 CGATCTGTGCACGAGTTCTTC 59.349 52.381 13.13 5.90 0.00 2.87
1312 1318 2.423926 TCTGTGCACGAGTTCTTCTC 57.576 50.000 13.13 0.00 39.62 2.87
1313 1319 1.681264 TCTGTGCACGAGTTCTTCTCA 59.319 47.619 13.13 0.00 42.88 3.27
1315 1321 0.787183 GTGCACGAGTTCTTCTCAGC 59.213 55.000 0.00 0.00 42.88 4.26
1318 1324 2.139118 GCACGAGTTCTTCTCAGCTTT 58.861 47.619 0.00 0.00 42.88 3.51
1323 1329 3.305676 CGAGTTCTTCTCAGCTTTGGAGA 60.306 47.826 0.00 0.00 42.88 3.71
1404 1410 0.169009 GGGAGCTGCGTTTTGATGAC 59.831 55.000 0.00 0.00 0.00 3.06
1547 1553 2.742053 CGTGTTCTTCTATGGTTGGGTG 59.258 50.000 0.00 0.00 0.00 4.61
1573 1579 3.778265 TCGTGGGATATGGAGATCATGA 58.222 45.455 0.00 0.00 37.30 3.07
1574 1580 4.356436 TCGTGGGATATGGAGATCATGAT 58.644 43.478 8.25 8.25 37.30 2.45
1575 1581 4.161001 TCGTGGGATATGGAGATCATGATG 59.839 45.833 14.30 0.00 37.30 3.07
1578 1584 4.472470 TGGGATATGGAGATCATGATGGAC 59.528 45.833 14.30 3.08 37.30 4.02
1708 1765 5.746245 GTGATTCTAGACAGTGATCCTTTCG 59.254 44.000 0.00 0.00 0.00 3.46
1709 1766 3.784701 TCTAGACAGTGATCCTTTCGC 57.215 47.619 0.00 0.00 34.93 4.70
1741 1798 3.743584 CGTGAATGATGAGAAGGATGGCT 60.744 47.826 0.00 0.00 0.00 4.75
1810 1867 3.429960 GGCTTCCTTGCATTTTGATCTCC 60.430 47.826 0.00 0.00 34.04 3.71
1895 1956 7.365741 GGCATTTTTGGTAGAGATATGACATG 58.634 38.462 0.00 0.00 0.00 3.21
1933 1994 2.851263 TTGGAGAGCACACCGTAATT 57.149 45.000 0.00 0.00 0.00 1.40
2031 2092 5.722021 TCCATGCTTATCTGCTCGTATTA 57.278 39.130 0.00 0.00 0.00 0.98
2032 2093 6.096673 TCCATGCTTATCTGCTCGTATTAA 57.903 37.500 0.00 0.00 0.00 1.40
2033 2094 6.701340 TCCATGCTTATCTGCTCGTATTAAT 58.299 36.000 0.00 0.00 0.00 1.40
2034 2095 7.161404 TCCATGCTTATCTGCTCGTATTAATT 58.839 34.615 0.00 0.00 0.00 1.40
2074 2135 7.971168 TGTGGTATGTTTTAGTTGACAACAAAG 59.029 33.333 20.08 0.00 37.77 2.77
2083 2144 8.873215 TTTAGTTGACAACAAAGTTGACAAAA 57.127 26.923 22.18 14.57 36.28 2.44
2133 2194 6.452494 TGTAGAACCTATGCTACTTCTGTC 57.548 41.667 0.00 0.00 38.21 3.51
2142 2206 2.897326 TGCTACTTCTGTCTACCTGCAA 59.103 45.455 0.00 0.00 0.00 4.08
2282 2351 3.505680 GTGCCATGGTGAGTTATGAACAA 59.494 43.478 14.67 0.00 0.00 2.83
2299 2370 1.637553 ACAATCCACTCCCTGATGCTT 59.362 47.619 0.00 0.00 0.00 3.91
2439 2510 3.626930 TCCATGCAGTTATTGGGGTAAC 58.373 45.455 3.50 0.00 35.33 2.50
2533 2604 1.063031 GTGCAAAAATCTTCCAGCGC 58.937 50.000 0.00 0.00 0.00 5.92
2582 2671 0.320683 CCAGCAATGGTGTCACTCGA 60.321 55.000 11.69 0.00 0.00 4.04
2877 2984 2.638363 AGGAGTTGGAAGAAGTGGTACC 59.362 50.000 4.43 4.43 0.00 3.34
2919 3029 1.019673 TTACTCGCCTAGTACAGCCG 58.980 55.000 0.00 0.00 40.48 5.52
3058 3168 1.805345 CTGCAGCAAGAACTGGAAGAG 59.195 52.381 0.00 0.00 37.57 2.85
3059 3169 1.163554 GCAGCAAGAACTGGAAGAGG 58.836 55.000 0.00 0.00 38.16 3.69
3060 3170 1.544314 GCAGCAAGAACTGGAAGAGGT 60.544 52.381 0.00 0.00 38.16 3.85
3061 3171 2.289694 GCAGCAAGAACTGGAAGAGGTA 60.290 50.000 0.00 0.00 38.16 3.08
3062 3172 3.330267 CAGCAAGAACTGGAAGAGGTAC 58.670 50.000 0.00 0.00 37.43 3.34
3063 3173 3.007398 CAGCAAGAACTGGAAGAGGTACT 59.993 47.826 0.00 0.00 37.43 2.73
3064 3174 4.220821 CAGCAAGAACTGGAAGAGGTACTA 59.779 45.833 0.00 0.00 33.97 1.82
3065 3175 4.464597 AGCAAGAACTGGAAGAGGTACTAG 59.535 45.833 0.00 0.00 41.55 2.57
3066 3176 4.749976 CAAGAACTGGAAGAGGTACTAGC 58.250 47.826 0.00 0.00 41.55 3.42
3067 3177 4.048970 AGAACTGGAAGAGGTACTAGCA 57.951 45.455 0.00 0.00 41.55 3.49
3068 3178 4.020543 AGAACTGGAAGAGGTACTAGCAG 58.979 47.826 0.00 0.00 41.55 4.24
3069 3179 3.459710 ACTGGAAGAGGTACTAGCAGT 57.540 47.619 0.00 0.00 41.55 4.40
3070 3180 3.093057 ACTGGAAGAGGTACTAGCAGTG 58.907 50.000 0.00 0.00 41.55 3.66
3071 3181 1.825474 TGGAAGAGGTACTAGCAGTGC 59.175 52.381 7.13 7.13 41.55 4.40
3072 3182 2.104170 GGAAGAGGTACTAGCAGTGCT 58.896 52.381 23.44 23.44 41.55 4.40
3073 3183 2.100087 GGAAGAGGTACTAGCAGTGCTC 59.900 54.545 23.64 6.98 41.55 4.26
3074 3184 2.516227 AGAGGTACTAGCAGTGCTCA 57.484 50.000 23.64 5.31 41.55 4.26
3075 3185 2.374184 AGAGGTACTAGCAGTGCTCAG 58.626 52.381 23.64 18.58 41.55 3.35
3076 3186 2.096248 GAGGTACTAGCAGTGCTCAGT 58.904 52.381 23.64 22.81 41.55 3.41
3077 3187 2.096248 AGGTACTAGCAGTGCTCAGTC 58.904 52.381 23.64 15.05 40.44 3.51
3078 3188 2.096248 GGTACTAGCAGTGCTCAGTCT 58.904 52.381 23.64 0.00 40.44 3.24
3079 3189 2.159310 GGTACTAGCAGTGCTCAGTCTG 60.159 54.545 23.64 8.56 40.44 3.51
3084 3194 3.601277 CAGTGCTCAGTCTGCTCAA 57.399 52.632 0.00 0.00 0.00 3.02
3085 3195 1.875009 CAGTGCTCAGTCTGCTCAAA 58.125 50.000 0.00 0.00 0.00 2.69
3086 3196 2.424557 CAGTGCTCAGTCTGCTCAAAT 58.575 47.619 0.00 0.00 0.00 2.32
3087 3197 2.812591 CAGTGCTCAGTCTGCTCAAATT 59.187 45.455 0.00 0.00 0.00 1.82
3088 3198 3.999001 CAGTGCTCAGTCTGCTCAAATTA 59.001 43.478 0.00 0.00 0.00 1.40
3089 3199 3.999663 AGTGCTCAGTCTGCTCAAATTAC 59.000 43.478 0.00 0.00 0.00 1.89
3090 3200 3.999663 GTGCTCAGTCTGCTCAAATTACT 59.000 43.478 0.00 0.00 0.00 2.24
3091 3201 4.092675 GTGCTCAGTCTGCTCAAATTACTC 59.907 45.833 0.00 0.00 0.00 2.59
3092 3202 4.248859 GCTCAGTCTGCTCAAATTACTCA 58.751 43.478 0.00 0.00 0.00 3.41
3093 3203 4.092675 GCTCAGTCTGCTCAAATTACTCAC 59.907 45.833 0.00 0.00 0.00 3.51
3094 3204 4.569943 TCAGTCTGCTCAAATTACTCACC 58.430 43.478 0.00 0.00 0.00 4.02
3095 3205 3.686726 CAGTCTGCTCAAATTACTCACCC 59.313 47.826 0.00 0.00 0.00 4.61
3096 3206 3.327757 AGTCTGCTCAAATTACTCACCCA 59.672 43.478 0.00 0.00 0.00 4.51
3097 3207 3.686726 GTCTGCTCAAATTACTCACCCAG 59.313 47.826 0.00 0.00 0.00 4.45
3098 3208 3.327757 TCTGCTCAAATTACTCACCCAGT 59.672 43.478 0.00 0.00 39.41 4.00
3099 3209 4.530553 TCTGCTCAAATTACTCACCCAGTA 59.469 41.667 0.00 0.00 36.43 2.74
3100 3210 4.832248 TGCTCAAATTACTCACCCAGTAG 58.168 43.478 0.00 0.00 38.90 2.57
3101 3211 4.530553 TGCTCAAATTACTCACCCAGTAGA 59.469 41.667 0.00 0.00 38.90 2.59
3102 3212 5.112686 GCTCAAATTACTCACCCAGTAGAG 58.887 45.833 0.00 0.00 38.90 2.43
3103 3213 5.086104 TCAAATTACTCACCCAGTAGAGC 57.914 43.478 0.00 0.00 38.90 4.09
3104 3214 4.081087 TCAAATTACTCACCCAGTAGAGCC 60.081 45.833 0.00 0.00 38.90 4.70
3105 3215 2.615986 TTACTCACCCAGTAGAGCCA 57.384 50.000 0.00 0.00 38.90 4.75
3106 3216 2.615986 TACTCACCCAGTAGAGCCAA 57.384 50.000 0.00 0.00 36.43 4.52
3107 3217 0.977395 ACTCACCCAGTAGAGCCAAC 59.023 55.000 0.00 0.00 35.28 3.77
3108 3218 1.270907 CTCACCCAGTAGAGCCAACT 58.729 55.000 0.00 0.00 0.00 3.16
3109 3219 0.976641 TCACCCAGTAGAGCCAACTG 59.023 55.000 4.19 4.19 43.26 3.16
3110 3220 0.687354 CACCCAGTAGAGCCAACTGT 59.313 55.000 9.16 0.00 42.30 3.55
3111 3221 0.977395 ACCCAGTAGAGCCAACTGTC 59.023 55.000 9.16 0.00 42.30 3.51
3112 3222 0.976641 CCCAGTAGAGCCAACTGTCA 59.023 55.000 9.16 0.00 42.30 3.58
3113 3223 1.066573 CCCAGTAGAGCCAACTGTCAG 60.067 57.143 0.00 0.00 42.30 3.51
3114 3224 1.620819 CCAGTAGAGCCAACTGTCAGT 59.379 52.381 0.00 0.00 42.30 3.41
3115 3225 2.611473 CCAGTAGAGCCAACTGTCAGTG 60.611 54.545 6.18 1.02 42.30 3.66
3116 3226 1.001406 AGTAGAGCCAACTGTCAGTGC 59.999 52.381 6.18 6.73 0.00 4.40
3117 3227 1.047801 TAGAGCCAACTGTCAGTGCA 58.952 50.000 15.48 0.00 0.00 4.57
3118 3228 0.250209 AGAGCCAACTGTCAGTGCAG 60.250 55.000 15.48 11.51 41.92 4.41
3119 3229 1.849976 GAGCCAACTGTCAGTGCAGC 61.850 60.000 15.48 13.76 39.96 5.25
3120 3230 2.188829 GCCAACTGTCAGTGCAGCA 61.189 57.895 6.18 0.00 39.96 4.41
3121 3231 1.727511 GCCAACTGTCAGTGCAGCAA 61.728 55.000 6.18 0.00 39.96 3.91
3122 3232 0.309922 CCAACTGTCAGTGCAGCAAG 59.690 55.000 6.18 0.00 39.96 4.01
3123 3233 1.302366 CAACTGTCAGTGCAGCAAGA 58.698 50.000 6.18 0.00 39.96 3.02
3124 3234 1.263484 CAACTGTCAGTGCAGCAAGAG 59.737 52.381 6.18 0.00 39.96 2.85
3125 3235 0.883814 ACTGTCAGTGCAGCAAGAGC 60.884 55.000 4.21 0.00 39.96 4.09
3126 3236 0.883370 CTGTCAGTGCAGCAAGAGCA 60.883 55.000 0.00 0.00 45.49 4.26
3127 3237 0.250597 TGTCAGTGCAGCAAGAGCAT 60.251 50.000 0.00 0.00 44.79 3.79
3128 3238 1.002315 TGTCAGTGCAGCAAGAGCATA 59.998 47.619 0.00 0.00 44.79 3.14
3129 3239 1.396301 GTCAGTGCAGCAAGAGCATAC 59.604 52.381 0.00 0.00 44.79 2.39
3130 3240 1.277273 TCAGTGCAGCAAGAGCATACT 59.723 47.619 0.00 0.00 44.79 2.12
3131 3241 1.664659 CAGTGCAGCAAGAGCATACTC 59.335 52.381 0.00 0.00 44.79 2.59
3146 3256 2.462456 TACTCTGCAGCAAGAACTGG 57.538 50.000 9.47 0.00 38.16 4.00
3147 3257 0.761187 ACTCTGCAGCAAGAACTGGA 59.239 50.000 9.47 0.00 38.16 3.86
3148 3258 1.141657 ACTCTGCAGCAAGAACTGGAA 59.858 47.619 9.47 0.00 37.57 3.53
3149 3259 1.805345 CTCTGCAGCAAGAACTGGAAG 59.195 52.381 9.47 0.00 37.57 3.46
3150 3260 1.417517 TCTGCAGCAAGAACTGGAAGA 59.582 47.619 9.47 0.00 37.57 2.87
3251 3379 3.600493 GAGCTTCAAGCAATGCTCG 57.400 52.632 13.10 0.00 45.56 5.03
3274 3402 4.843728 CTCTGCTCAAATTACTTACCCCA 58.156 43.478 0.00 0.00 0.00 4.96
3280 3408 4.913784 TCAAATTACTTACCCCACCACTC 58.086 43.478 0.00 0.00 0.00 3.51
3308 3436 4.431131 CCTGCCGGAGCCCAATGT 62.431 66.667 5.05 0.00 38.69 2.71
3561 4103 0.948678 TGGCTGCTTTGTAACGTTCC 59.051 50.000 2.82 0.00 0.00 3.62
3601 4143 1.082679 CACTCTGCTGCTCGATGGTG 61.083 60.000 0.00 0.15 0.00 4.17
3610 4157 4.697828 TGCTGCTCGATGGTGTTATTTTAA 59.302 37.500 0.00 0.00 0.00 1.52
3678 4225 4.408270 AGCTGTGTGGATCATTACTCATCT 59.592 41.667 0.00 0.00 0.00 2.90
3738 4340 1.447317 CTGTTGGGACGCAGCTTGTT 61.447 55.000 7.82 0.00 0.00 2.83
3873 4499 0.390998 GAGGCTGAGAAGGCTGTGAC 60.391 60.000 6.53 0.00 45.06 3.67
3914 4540 4.631377 TGAGTATACTGTGCAACTTGATGC 59.369 41.667 10.90 0.00 46.58 3.91
3915 4541 3.941483 AGTATACTGTGCAACTTGATGCC 59.059 43.478 4.10 0.00 45.83 4.40
3916 4542 2.566833 TACTGTGCAACTTGATGCCT 57.433 45.000 0.00 0.00 45.83 4.75
3917 4543 1.696063 ACTGTGCAACTTGATGCCTT 58.304 45.000 0.00 0.00 45.83 4.35
3918 4544 1.338973 ACTGTGCAACTTGATGCCTTG 59.661 47.619 0.00 0.00 45.83 3.61
3919 4545 1.610038 CTGTGCAACTTGATGCCTTGA 59.390 47.619 0.00 0.00 45.83 3.02
3920 4546 2.230508 CTGTGCAACTTGATGCCTTGAT 59.769 45.455 0.00 0.00 45.83 2.57
3921 4547 2.029739 TGTGCAACTTGATGCCTTGATG 60.030 45.455 0.00 0.00 45.83 3.07
4110 4752 5.508224 GCGTTGTTCAGTTCATATGCTAAAC 59.492 40.000 0.00 0.00 0.00 2.01
4155 4808 1.730064 TCGCTGATTAACCTTTCGTGC 59.270 47.619 0.00 0.00 0.00 5.34
4214 4873 0.755686 AAATCGCAGCTCCTAGAGGG 59.244 55.000 0.00 0.00 35.41 4.30
4216 4875 2.012824 ATCGCAGCTCCTAGAGGGGA 62.013 60.000 0.00 0.00 38.16 4.81
4289 4948 3.003378 TCGTATGCAATCTACCGAGTCAG 59.997 47.826 0.00 0.00 0.00 3.51
4417 5079 1.511318 TTTGTCACAATGGCGACCGG 61.511 55.000 0.00 0.00 0.00 5.28
4476 5138 3.131396 CAGGTCAGTGTAACAGTTGGTC 58.869 50.000 0.00 0.00 41.43 4.02
4505 5167 1.527311 GTGTCAGCTTGAGTTTCCGTC 59.473 52.381 0.00 0.00 0.00 4.79
4602 5264 2.348998 CGAACCAAGGCTGCCTCT 59.651 61.111 23.61 9.59 30.89 3.69
4608 5270 0.392729 CCAAGGCTGCCTCTCTCTTG 60.393 60.000 23.61 15.00 35.80 3.02
4626 5288 0.329261 TGGCAACCAGATTCCTCCTG 59.671 55.000 0.00 0.00 0.00 3.86
4632 5294 4.141620 GCAACCAGATTCCTCCTGAGAATA 60.142 45.833 0.00 0.00 33.65 1.75
4636 5298 4.502950 CCAGATTCCTCCTGAGAATACTGC 60.503 50.000 0.00 0.00 33.65 4.40
4652 5314 2.387757 ACTGCCAGTCAAAACCAACAT 58.612 42.857 0.00 0.00 0.00 2.71
4687 5349 2.540383 TGGAGCCTCACTGAATGTAGT 58.460 47.619 0.00 0.00 0.00 2.73
4695 5357 4.322725 CCTCACTGAATGTAGTGCCAACTA 60.323 45.833 0.00 0.00 45.94 2.24
4750 5412 6.287589 AGCTAGAAGTAGTACAAGCAATGT 57.712 37.500 15.09 0.67 46.36 2.71
4760 5422 2.034124 ACAAGCAATGTTTCCACTGCT 58.966 42.857 0.00 0.00 46.85 4.24
4771 5433 2.724977 TCCACTGCTCAAGTTACTCG 57.275 50.000 0.00 0.00 36.83 4.18
4781 5443 3.276857 TCAAGTTACTCGCCGACTAGAT 58.723 45.455 0.00 0.00 0.00 1.98
4790 5452 1.534175 CGCCGACTAGATCCAACTGTC 60.534 57.143 0.00 0.00 0.00 3.51
4792 5454 2.480416 GCCGACTAGATCCAACTGTCAG 60.480 54.545 0.00 0.00 0.00 3.51
4794 5456 3.193691 CCGACTAGATCCAACTGTCAGTT 59.806 47.826 12.62 12.62 39.39 3.16
4802 5464 2.503765 TCCAACTGTCAGTTCACCAAGA 59.496 45.455 15.48 3.66 36.03 3.02
4803 5465 3.136443 TCCAACTGTCAGTTCACCAAGAT 59.864 43.478 15.48 0.00 36.03 2.40
4808 5470 1.002087 GTCAGTTCACCAAGATCGGGT 59.998 52.381 6.31 6.31 39.88 5.28
4820 5482 5.046304 ACCAAGATCGGGTGAATATAGGATG 60.046 44.000 10.82 0.00 37.23 3.51
4821 5483 4.744795 AGATCGGGTGAATATAGGATGC 57.255 45.455 0.00 0.00 0.00 3.91
4822 5484 4.357325 AGATCGGGTGAATATAGGATGCT 58.643 43.478 0.00 0.00 0.00 3.79
4823 5485 4.404073 AGATCGGGTGAATATAGGATGCTC 59.596 45.833 0.00 0.00 0.00 4.26
4824 5486 2.492088 TCGGGTGAATATAGGATGCTCG 59.508 50.000 0.00 0.00 0.00 5.03
4825 5487 2.417379 CGGGTGAATATAGGATGCTCGG 60.417 54.545 0.00 0.00 0.00 4.63
4826 5488 2.567615 GGGTGAATATAGGATGCTCGGT 59.432 50.000 0.00 0.00 0.00 4.69
4842 5504 3.024547 CTCGGTCCCTCTAGTTGATTGA 58.975 50.000 0.00 0.00 0.00 2.57
4849 5511 4.019321 TCCCTCTAGTTGATTGACCTTTGG 60.019 45.833 0.00 0.00 0.00 3.28
4871 5533 5.442391 GGTCTTTTACCCAATGCCTATACA 58.558 41.667 0.00 0.00 43.16 2.29
4872 5534 6.068670 GGTCTTTTACCCAATGCCTATACAT 58.931 40.000 0.00 0.00 43.16 2.29
4873 5535 7.228590 GGTCTTTTACCCAATGCCTATACATA 58.771 38.462 0.00 0.00 43.16 2.29
4874 5536 7.722285 GGTCTTTTACCCAATGCCTATACATAA 59.278 37.037 0.00 0.00 43.16 1.90
4875 5537 9.297037 GTCTTTTACCCAATGCCTATACATAAT 57.703 33.333 0.00 0.00 0.00 1.28
4876 5538 9.515226 TCTTTTACCCAATGCCTATACATAATC 57.485 33.333 0.00 0.00 0.00 1.75
4877 5539 9.520515 CTTTTACCCAATGCCTATACATAATCT 57.479 33.333 0.00 0.00 0.00 2.40
4879 5541 6.959606 ACCCAATGCCTATACATAATCTCT 57.040 37.500 0.00 0.00 0.00 3.10
4880 5542 9.555411 TTACCCAATGCCTATACATAATCTCTA 57.445 33.333 0.00 0.00 0.00 2.43
4881 5543 8.629821 ACCCAATGCCTATACATAATCTCTAT 57.370 34.615 0.00 0.00 0.00 1.98
4889 5551 9.828852 GCCTATACATAATCTCTATATACGCAC 57.171 37.037 0.00 0.00 0.00 5.34
4894 5556 7.539436 ACATAATCTCTATATACGCACACAGG 58.461 38.462 0.00 0.00 0.00 4.00
4897 5559 6.842437 ATCTCTATATACGCACACAGGATT 57.158 37.500 0.00 0.00 0.00 3.01
4899 5561 6.004574 TCTCTATATACGCACACAGGATTCT 58.995 40.000 0.00 0.00 0.00 2.40
4900 5562 7.166167 TCTCTATATACGCACACAGGATTCTA 58.834 38.462 0.00 0.00 0.00 2.10
4901 5563 7.664318 TCTCTATATACGCACACAGGATTCTAA 59.336 37.037 0.00 0.00 0.00 2.10
4902 5564 8.349568 TCTATATACGCACACAGGATTCTAAT 57.650 34.615 0.00 0.00 0.00 1.73
4903 5565 8.244113 TCTATATACGCACACAGGATTCTAATG 58.756 37.037 0.00 0.00 0.00 1.90
4904 5566 2.632377 ACGCACACAGGATTCTAATGG 58.368 47.619 0.00 0.00 0.00 3.16
4905 5567 2.027192 ACGCACACAGGATTCTAATGGT 60.027 45.455 0.00 0.00 0.00 3.55
4906 5568 2.609459 CGCACACAGGATTCTAATGGTC 59.391 50.000 0.00 0.00 0.00 4.02
4907 5569 3.609853 GCACACAGGATTCTAATGGTCA 58.390 45.455 0.00 0.00 0.00 4.02
4908 5570 4.202441 GCACACAGGATTCTAATGGTCAT 58.798 43.478 0.00 0.00 0.00 3.06
4909 5571 4.036027 GCACACAGGATTCTAATGGTCATG 59.964 45.833 0.00 0.00 0.00 3.07
4910 5572 4.577693 CACACAGGATTCTAATGGTCATGG 59.422 45.833 0.00 0.00 0.00 3.66
4911 5573 4.474651 ACACAGGATTCTAATGGTCATGGA 59.525 41.667 0.00 0.00 0.00 3.41
4912 5574 4.818546 CACAGGATTCTAATGGTCATGGAC 59.181 45.833 0.00 0.00 0.00 4.02
4922 5584 2.785868 GTCATGGACCAGGACATGC 58.214 57.895 29.60 6.57 43.43 4.06
4923 5585 0.749454 GTCATGGACCAGGACATGCC 60.749 60.000 29.60 6.20 43.43 4.40
4924 5586 1.206811 TCATGGACCAGGACATGCCA 61.207 55.000 18.47 7.73 43.11 4.92
4925 5587 1.033746 CATGGACCAGGACATGCCAC 61.034 60.000 0.00 0.00 38.15 5.01
4926 5588 1.210204 ATGGACCAGGACATGCCACT 61.210 55.000 0.00 0.00 40.02 4.00
4927 5589 1.380302 GGACCAGGACATGCCACTT 59.620 57.895 8.58 0.00 40.02 3.16
4928 5590 0.251341 GGACCAGGACATGCCACTTT 60.251 55.000 8.58 0.00 40.02 2.66
4929 5591 1.168714 GACCAGGACATGCCACTTTC 58.831 55.000 8.58 0.00 40.02 2.62
4930 5592 0.251341 ACCAGGACATGCCACTTTCC 60.251 55.000 8.58 0.00 40.02 3.13
4931 5593 0.038744 CCAGGACATGCCACTTTCCT 59.961 55.000 8.58 2.13 39.17 3.36
4932 5594 1.457346 CAGGACATGCCACTTTCCTC 58.543 55.000 8.58 0.00 36.26 3.71
4933 5595 0.329596 AGGACATGCCACTTTCCTCC 59.670 55.000 8.58 0.00 40.02 4.30
4934 5596 0.681243 GGACATGCCACTTTCCTCCC 60.681 60.000 0.00 0.00 36.34 4.30
4935 5597 0.681243 GACATGCCACTTTCCTCCCC 60.681 60.000 0.00 0.00 0.00 4.81
4936 5598 1.142688 ACATGCCACTTTCCTCCCCT 61.143 55.000 0.00 0.00 0.00 4.79
4937 5599 0.040204 CATGCCACTTTCCTCCCCTT 59.960 55.000 0.00 0.00 0.00 3.95
4938 5600 0.040204 ATGCCACTTTCCTCCCCTTG 59.960 55.000 0.00 0.00 0.00 3.61
4939 5601 1.065410 TGCCACTTTCCTCCCCTTGA 61.065 55.000 0.00 0.00 0.00 3.02
4940 5602 0.112412 GCCACTTTCCTCCCCTTGAA 59.888 55.000 0.00 0.00 0.00 2.69
4941 5603 1.480498 GCCACTTTCCTCCCCTTGAAA 60.480 52.381 0.00 0.00 0.00 2.69
4942 5604 2.239400 CCACTTTCCTCCCCTTGAAAC 58.761 52.381 0.00 0.00 0.00 2.78
4943 5605 2.158460 CCACTTTCCTCCCCTTGAAACT 60.158 50.000 0.00 0.00 0.00 2.66
4944 5606 3.149981 CACTTTCCTCCCCTTGAAACTC 58.850 50.000 0.00 0.00 0.00 3.01
4945 5607 2.108425 ACTTTCCTCCCCTTGAAACTCC 59.892 50.000 0.00 0.00 0.00 3.85
4946 5608 0.690762 TTCCTCCCCTTGAAACTCCG 59.309 55.000 0.00 0.00 0.00 4.63
4947 5609 0.473117 TCCTCCCCTTGAAACTCCGT 60.473 55.000 0.00 0.00 0.00 4.69
4948 5610 0.400594 CCTCCCCTTGAAACTCCGTT 59.599 55.000 0.00 0.00 0.00 4.44
4949 5611 1.523758 CTCCCCTTGAAACTCCGTTG 58.476 55.000 0.00 0.00 0.00 4.10
4950 5612 1.071699 CTCCCCTTGAAACTCCGTTGA 59.928 52.381 0.00 0.00 0.00 3.18
4951 5613 1.202722 TCCCCTTGAAACTCCGTTGAC 60.203 52.381 0.00 0.00 0.00 3.18
4952 5614 1.235724 CCCTTGAAACTCCGTTGACC 58.764 55.000 0.00 0.00 0.00 4.02
4953 5615 1.235724 CCTTGAAACTCCGTTGACCC 58.764 55.000 0.00 0.00 0.00 4.46
4954 5616 1.202770 CCTTGAAACTCCGTTGACCCT 60.203 52.381 0.00 0.00 0.00 4.34
4955 5617 2.143925 CTTGAAACTCCGTTGACCCTC 58.856 52.381 0.00 0.00 0.00 4.30
4956 5618 1.124780 TGAAACTCCGTTGACCCTCA 58.875 50.000 0.00 0.00 0.00 3.86
4957 5619 1.487142 TGAAACTCCGTTGACCCTCAA 59.513 47.619 0.00 0.00 33.32 3.02
4958 5620 2.143925 GAAACTCCGTTGACCCTCAAG 58.856 52.381 0.00 0.00 37.00 3.02
4959 5621 0.250338 AACTCCGTTGACCCTCAAGC 60.250 55.000 0.00 0.00 37.00 4.01
4960 5622 1.371183 CTCCGTTGACCCTCAAGCA 59.629 57.895 0.00 0.00 37.00 3.91
4961 5623 0.951040 CTCCGTTGACCCTCAAGCAC 60.951 60.000 0.00 0.00 37.00 4.40
4962 5624 1.966451 CCGTTGACCCTCAAGCACC 60.966 63.158 0.00 0.00 37.00 5.01
4963 5625 1.227823 CGTTGACCCTCAAGCACCA 60.228 57.895 0.00 0.00 37.00 4.17
4964 5626 0.606401 CGTTGACCCTCAAGCACCAT 60.606 55.000 0.00 0.00 37.00 3.55
4965 5627 1.338674 CGTTGACCCTCAAGCACCATA 60.339 52.381 0.00 0.00 37.00 2.74
4966 5628 2.084546 GTTGACCCTCAAGCACCATAC 58.915 52.381 0.00 0.00 37.00 2.39
4967 5629 1.656587 TGACCCTCAAGCACCATACT 58.343 50.000 0.00 0.00 0.00 2.12
4968 5630 1.555075 TGACCCTCAAGCACCATACTC 59.445 52.381 0.00 0.00 0.00 2.59
4969 5631 0.912486 ACCCTCAAGCACCATACTCC 59.088 55.000 0.00 0.00 0.00 3.85
4970 5632 0.181350 CCCTCAAGCACCATACTCCC 59.819 60.000 0.00 0.00 0.00 4.30
4971 5633 1.207791 CCTCAAGCACCATACTCCCT 58.792 55.000 0.00 0.00 0.00 4.20
4972 5634 1.561542 CCTCAAGCACCATACTCCCTT 59.438 52.381 0.00 0.00 0.00 3.95
4973 5635 2.636830 CTCAAGCACCATACTCCCTTG 58.363 52.381 0.00 0.00 35.44 3.61
4974 5636 1.098050 CAAGCACCATACTCCCTTGC 58.902 55.000 0.00 0.00 0.00 4.01
4975 5637 0.034089 AAGCACCATACTCCCTTGCC 60.034 55.000 0.00 0.00 33.48 4.52
4976 5638 1.207488 AGCACCATACTCCCTTGCCA 61.207 55.000 0.00 0.00 33.48 4.92
4977 5639 0.749454 GCACCATACTCCCTTGCCAG 60.749 60.000 0.00 0.00 0.00 4.85
4978 5640 0.620556 CACCATACTCCCTTGCCAGT 59.379 55.000 0.00 0.00 0.00 4.00
4979 5641 0.620556 ACCATACTCCCTTGCCAGTG 59.379 55.000 0.00 0.00 0.00 3.66
4980 5642 0.620556 CCATACTCCCTTGCCAGTGT 59.379 55.000 0.00 0.00 0.00 3.55
4981 5643 1.407437 CCATACTCCCTTGCCAGTGTC 60.407 57.143 0.00 0.00 0.00 3.67
4982 5644 1.556911 CATACTCCCTTGCCAGTGTCT 59.443 52.381 0.00 0.00 0.00 3.41
4983 5645 0.976641 TACTCCCTTGCCAGTGTCTG 59.023 55.000 0.00 0.00 0.00 3.51
4993 5655 2.086054 CCAGTGTCTGGTTCAGCTAC 57.914 55.000 7.55 0.00 45.82 3.58
4994 5656 1.344438 CCAGTGTCTGGTTCAGCTACA 59.656 52.381 7.55 0.00 45.82 2.74
4997 5659 2.094494 AGTGTCTGGTTCAGCTACATCG 60.094 50.000 0.00 0.00 0.00 3.84
5034 5703 3.644966 TTGTCCTCAGTTTCCTGTTGT 57.355 42.857 0.00 0.00 39.82 3.32
5041 5710 3.194861 TCAGTTTCCTGTTGTTCTCACG 58.805 45.455 0.00 0.00 39.82 4.35
5046 5715 2.557317 TCCTGTTGTTCTCACGGAAAC 58.443 47.619 0.00 0.00 35.51 2.78
5062 5731 4.035278 GGAAACGTGAATGGTCAAAACA 57.965 40.909 0.00 0.00 34.87 2.83
5063 5732 4.425520 GGAAACGTGAATGGTCAAAACAA 58.574 39.130 0.00 0.00 34.87 2.83
5064 5733 4.865365 GGAAACGTGAATGGTCAAAACAAA 59.135 37.500 0.00 0.00 34.87 2.83
5065 5734 5.522097 GGAAACGTGAATGGTCAAAACAAAT 59.478 36.000 0.00 0.00 34.87 2.32
5066 5735 6.292114 GGAAACGTGAATGGTCAAAACAAATC 60.292 38.462 0.00 0.00 34.87 2.17
5067 5736 5.255710 ACGTGAATGGTCAAAACAAATCA 57.744 34.783 0.00 0.00 34.87 2.57
5068 5737 5.280945 ACGTGAATGGTCAAAACAAATCAG 58.719 37.500 0.00 0.00 34.87 2.90
5069 5738 5.163561 ACGTGAATGGTCAAAACAAATCAGT 60.164 36.000 0.00 0.00 34.87 3.41
5070 5739 5.399301 CGTGAATGGTCAAAACAAATCAGTC 59.601 40.000 0.00 0.00 34.87 3.51
5071 5740 6.507023 GTGAATGGTCAAAACAAATCAGTCT 58.493 36.000 0.00 0.00 34.87 3.24
5072 5741 6.980397 GTGAATGGTCAAAACAAATCAGTCTT 59.020 34.615 0.00 0.00 34.87 3.01
5073 5742 7.168135 GTGAATGGTCAAAACAAATCAGTCTTC 59.832 37.037 0.00 0.00 34.87 2.87
5074 5743 6.966534 ATGGTCAAAACAAATCAGTCTTCT 57.033 33.333 0.00 0.00 0.00 2.85
5075 5744 6.377327 TGGTCAAAACAAATCAGTCTTCTC 57.623 37.500 0.00 0.00 0.00 2.87
5076 5745 6.122277 TGGTCAAAACAAATCAGTCTTCTCT 58.878 36.000 0.00 0.00 0.00 3.10
5077 5746 6.038603 TGGTCAAAACAAATCAGTCTTCTCTG 59.961 38.462 0.00 0.00 36.85 3.35
5078 5747 6.038714 GGTCAAAACAAATCAGTCTTCTCTGT 59.961 38.462 0.00 0.00 36.85 3.41
5079 5748 7.226720 GGTCAAAACAAATCAGTCTTCTCTGTA 59.773 37.037 0.00 0.00 36.85 2.74
5080 5749 8.778358 GTCAAAACAAATCAGTCTTCTCTGTAT 58.222 33.333 0.00 0.00 36.85 2.29
5081 5750 9.342308 TCAAAACAAATCAGTCTTCTCTGTATT 57.658 29.630 0.00 0.00 36.85 1.89
5082 5751 9.390795 CAAAACAAATCAGTCTTCTCTGTATTG 57.609 33.333 0.00 0.00 37.69 1.90
5083 5752 6.734104 ACAAATCAGTCTTCTCTGTATTGC 57.266 37.500 0.00 0.00 36.55 3.56
5084 5753 6.471146 ACAAATCAGTCTTCTCTGTATTGCT 58.529 36.000 0.00 0.00 36.55 3.91
5085 5754 6.593382 ACAAATCAGTCTTCTCTGTATTGCTC 59.407 38.462 0.00 0.00 36.55 4.26
5086 5755 5.929058 ATCAGTCTTCTCTGTATTGCTCA 57.071 39.130 0.00 0.00 36.85 4.26
5087 5756 5.321959 TCAGTCTTCTCTGTATTGCTCAG 57.678 43.478 0.00 0.00 36.85 3.35
5088 5757 3.864583 CAGTCTTCTCTGTATTGCTCAGC 59.135 47.826 0.00 0.00 33.48 4.26
5089 5758 3.768757 AGTCTTCTCTGTATTGCTCAGCT 59.231 43.478 0.00 0.00 33.48 4.24
5090 5759 3.864583 GTCTTCTCTGTATTGCTCAGCTG 59.135 47.826 7.63 7.63 33.48 4.24
5091 5760 3.766051 TCTTCTCTGTATTGCTCAGCTGA 59.234 43.478 17.19 17.19 33.48 4.26
5092 5761 4.221482 TCTTCTCTGTATTGCTCAGCTGAA 59.779 41.667 18.85 3.02 33.48 3.02
5093 5762 3.854666 TCTCTGTATTGCTCAGCTGAAC 58.145 45.455 18.85 14.43 33.48 3.18
5094 5763 3.259123 TCTCTGTATTGCTCAGCTGAACA 59.741 43.478 18.85 17.23 33.48 3.18
5095 5764 4.081254 TCTCTGTATTGCTCAGCTGAACAT 60.081 41.667 19.94 12.78 33.48 2.71
5096 5765 5.127682 TCTCTGTATTGCTCAGCTGAACATA 59.872 40.000 19.94 11.85 33.48 2.29
5114 5783 9.605275 CTGAACATATACAAGGATATACATGGG 57.395 37.037 0.00 0.00 0.00 4.00
5118 5787 7.184570 ACATATACAAGGATATACATGGGCCTT 59.815 37.037 4.53 0.00 39.42 4.35
5129 5798 2.123982 GGGCCTTGATCCTGCCTG 60.124 66.667 14.60 0.00 44.71 4.85
5159 5828 5.809001 TGAGTTTGAGAACATGAAGCCTAT 58.191 37.500 0.00 0.00 38.26 2.57
5160 5829 5.645067 TGAGTTTGAGAACATGAAGCCTATG 59.355 40.000 0.00 0.00 38.26 2.23
5161 5830 4.397417 AGTTTGAGAACATGAAGCCTATGC 59.603 41.667 0.00 0.00 38.26 3.14
5185 5854 0.323629 CTCGGGTTTGAGCCTTGGTA 59.676 55.000 0.00 0.00 32.48 3.25
5192 5861 3.255888 GGTTTGAGCCTTGGTAAAGAAGG 59.744 47.826 0.00 0.00 42.68 3.46
5193 5862 4.142038 GTTTGAGCCTTGGTAAAGAAGGA 58.858 43.478 0.00 0.00 42.44 3.36
5197 5866 2.041620 AGCCTTGGTAAAGAAGGATGCA 59.958 45.455 0.00 0.00 42.44 3.96
5203 5872 4.469657 TGGTAAAGAAGGATGCAACTTGT 58.530 39.130 11.25 5.21 0.00 3.16
5235 5905 8.483307 ACATATTGGAGAAAATTGTTGATTGC 57.517 30.769 0.00 0.00 0.00 3.56
5243 5913 4.870123 AAATTGTTGATTGCTGGCAGTA 57.130 36.364 17.16 9.18 0.00 2.74
5244 5914 4.870123 AATTGTTGATTGCTGGCAGTAA 57.130 36.364 20.22 20.22 0.00 2.24
5252 5922 1.961793 TGCTGGCAGTAAGAACGTTT 58.038 45.000 17.16 0.00 0.00 3.60
5263 5933 6.357240 GCAGTAAGAACGTTTTAAAGAAGCAG 59.643 38.462 0.46 0.00 0.00 4.24
5270 5940 3.488384 CGTTTTAAAGAAGCAGCCACACA 60.488 43.478 0.00 0.00 0.00 3.72
5274 5944 2.806608 AAGAAGCAGCCACACAAATG 57.193 45.000 0.00 0.00 0.00 2.32
5299 5969 1.561076 TGGTTAGCTCATGCCTCACAT 59.439 47.619 0.00 0.00 40.66 3.21
5340 6018 6.876257 GGCAATCTAAATAGCAGCAGTACTAT 59.124 38.462 0.00 0.00 0.00 2.12
5346 6024 8.090831 TCTAAATAGCAGCAGTACTATCAATGG 58.909 37.037 0.00 0.00 0.00 3.16
5347 6025 2.843701 AGCAGCAGTACTATCAATGGC 58.156 47.619 0.00 0.00 0.00 4.40
5348 6026 1.528586 GCAGCAGTACTATCAATGGCG 59.471 52.381 0.00 0.00 0.00 5.69
5349 6027 1.528586 CAGCAGTACTATCAATGGCGC 59.471 52.381 0.00 0.00 0.00 6.53
5372 6050 0.971386 CTGCAAGGAAATGCCCAAGT 59.029 50.000 0.00 0.00 45.83 3.16
5386 6064 1.909302 CCCAAGTACACACTCCCATCT 59.091 52.381 0.00 0.00 32.29 2.90
5457 6135 4.287067 AGAGAATTTAGGAGTGCCTGTCAA 59.713 41.667 0.00 0.00 46.45 3.18
5489 6167 3.257469 TCTGAATCTCAAATCTGCGCT 57.743 42.857 9.73 0.00 0.00 5.92
5492 6170 2.674852 TGAATCTCAAATCTGCGCTGAC 59.325 45.455 19.81 4.09 0.00 3.51
5541 6219 7.136772 CAGTTCCATACTAATGCACATTCATG 58.863 38.462 0.00 3.07 34.56 3.07
5569 6247 8.470805 TGAACCTTGAACTATCTGTATCTCTTC 58.529 37.037 0.00 0.00 0.00 2.87
5570 6248 7.033530 ACCTTGAACTATCTGTATCTCTTCG 57.966 40.000 0.00 0.00 0.00 3.79
5572 6250 6.915300 CCTTGAACTATCTGTATCTCTTCGTG 59.085 42.308 0.00 0.00 0.00 4.35
5573 6251 5.822278 TGAACTATCTGTATCTCTTCGTGC 58.178 41.667 0.00 0.00 0.00 5.34
5660 6345 3.943381 TGAATGGTGCAATGTCAGAGATC 59.057 43.478 0.00 0.00 0.00 2.75
5687 6373 0.381089 GTGGGATCCTCGTACACTCG 59.619 60.000 12.58 0.00 0.00 4.18
5716 6402 7.641760 CACATAAGCCAAAATTTGAAAGCTTT 58.358 30.769 19.95 12.53 37.09 3.51
5730 6416 5.916318 TGAAAGCTTTGATTTGTGGTGAAT 58.084 33.333 18.30 0.00 0.00 2.57
5767 6453 9.988815 AACTAATCTTGATTCGATAAGCATACT 57.011 29.630 0.00 0.00 29.62 2.12
5768 6454 9.988815 ACTAATCTTGATTCGATAAGCATACTT 57.011 29.630 0.00 0.00 40.07 2.24
5802 6488 6.782082 TGTGAGCTATTCTGAGAACAGTAT 57.218 37.500 2.11 0.00 43.81 2.12
5822 6510 8.354011 CAGTATGTGGTTATTACTACAGAAGC 57.646 38.462 7.15 0.00 46.91 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.479269 CTTCAACCGCCGCGAGAC 61.479 66.667 15.93 0.00 0.00 3.36
8 9 3.982372 TAGCTTCAACCGCCGCGAG 62.982 63.158 15.93 7.04 0.00 5.03
9 10 3.982372 CTAGCTTCAACCGCCGCGA 62.982 63.158 15.93 0.00 0.00 5.87
10 11 3.554692 CTAGCTTCAACCGCCGCG 61.555 66.667 5.59 5.59 0.00 6.46
11 12 3.865830 GCTAGCTTCAACCGCCGC 61.866 66.667 7.70 0.00 0.00 6.53
12 13 3.195698 GGCTAGCTTCAACCGCCG 61.196 66.667 15.72 0.00 0.00 6.46
13 14 3.195698 CGGCTAGCTTCAACCGCC 61.196 66.667 15.72 0.00 39.08 6.13
14 15 3.195698 CCGGCTAGCTTCAACCGC 61.196 66.667 15.72 0.00 44.29 5.68
15 16 3.195698 GCCGGCTAGCTTCAACCG 61.196 66.667 22.15 8.26 45.21 4.44
16 17 3.195698 CGCCGGCTAGCTTCAACC 61.196 66.667 26.68 0.00 0.00 3.77
17 18 3.865830 GCGCCGGCTAGCTTCAAC 61.866 66.667 26.68 0.00 35.83 3.18
33 34 3.186047 CGAACCACGGGATGTCGC 61.186 66.667 0.00 0.00 38.46 5.19
35 36 2.162338 TGGACGAACCACGGGATGTC 62.162 60.000 0.00 0.00 44.64 3.06
36 37 2.211410 TGGACGAACCACGGGATGT 61.211 57.895 0.00 0.00 44.64 3.06
37 38 2.660206 TGGACGAACCACGGGATG 59.340 61.111 0.00 0.00 44.64 3.51
45 46 2.047560 CCCGGAAGTGGACGAACC 60.048 66.667 0.73 0.00 39.54 3.62
46 47 2.741211 GCCCGGAAGTGGACGAAC 60.741 66.667 0.73 0.00 0.00 3.95
47 48 4.367023 CGCCCGGAAGTGGACGAA 62.367 66.667 0.73 0.00 0.00 3.85
105 106 3.462678 GTGAGAGGGACCCGGAGC 61.463 72.222 0.73 0.00 0.00 4.70
106 107 3.141488 CGTGAGAGGGACCCGGAG 61.141 72.222 0.73 0.00 0.00 4.63
107 108 4.753662 CCGTGAGAGGGACCCGGA 62.754 72.222 0.73 0.00 41.08 5.14
113 114 4.458829 ATCCGGCCGTGAGAGGGA 62.459 66.667 26.12 12.70 0.00 4.20
114 115 3.917760 GATCCGGCCGTGAGAGGG 61.918 72.222 26.12 6.69 0.00 4.30
115 116 2.835431 AGATCCGGCCGTGAGAGG 60.835 66.667 26.12 7.54 0.00 3.69
116 117 2.415010 CAGATCCGGCCGTGAGAG 59.585 66.667 26.12 8.39 0.00 3.20
117 118 3.838271 GCAGATCCGGCCGTGAGA 61.838 66.667 26.12 15.17 0.00 3.27
118 119 3.842923 AGCAGATCCGGCCGTGAG 61.843 66.667 26.12 9.25 0.00 3.51
119 120 4.147449 CAGCAGATCCGGCCGTGA 62.147 66.667 26.12 20.95 0.00 4.35
145 146 3.665675 AATGTGGAGCTCCGGACGC 62.666 63.158 27.43 15.53 39.43 5.19
146 147 1.519455 GAATGTGGAGCTCCGGACG 60.519 63.158 27.43 0.00 39.43 4.79
147 148 1.519455 CGAATGTGGAGCTCCGGAC 60.519 63.158 27.43 20.76 39.43 4.79
148 149 2.721167 CCGAATGTGGAGCTCCGGA 61.721 63.158 27.43 16.70 39.31 5.14
149 150 2.202932 CCGAATGTGGAGCTCCGG 60.203 66.667 27.43 19.04 39.43 5.14
150 151 2.892425 GCCGAATGTGGAGCTCCG 60.892 66.667 27.43 14.01 39.43 4.63
151 152 2.514824 GGCCGAATGTGGAGCTCC 60.515 66.667 26.78 26.78 0.00 4.70
152 153 2.514824 GGGCCGAATGTGGAGCTC 60.515 66.667 4.71 4.71 0.00 4.09
153 154 4.115199 GGGGCCGAATGTGGAGCT 62.115 66.667 0.00 0.00 0.00 4.09
154 155 4.424711 TGGGGCCGAATGTGGAGC 62.425 66.667 0.00 0.00 0.00 4.70
155 156 2.438434 GTGGGGCCGAATGTGGAG 60.438 66.667 0.00 0.00 0.00 3.86
156 157 2.611505 ATGTGGGGCCGAATGTGGA 61.612 57.895 0.00 0.00 0.00 4.02
157 158 2.044053 ATGTGGGGCCGAATGTGG 60.044 61.111 0.00 0.00 0.00 4.17
158 159 2.417257 CCATGTGGGGCCGAATGTG 61.417 63.158 0.00 0.00 0.00 3.21
159 160 2.044053 CCATGTGGGGCCGAATGT 60.044 61.111 0.00 0.00 0.00 2.71
201 202 2.665185 ATATTTCTCGCCGCCGGC 60.665 61.111 20.42 20.42 46.75 6.13
202 203 2.317609 CCATATTTCTCGCCGCCGG 61.318 63.158 0.00 0.00 34.56 6.13
203 204 1.284982 CTCCATATTTCTCGCCGCCG 61.285 60.000 0.00 0.00 0.00 6.46
204 205 0.033504 TCTCCATATTTCTCGCCGCC 59.966 55.000 0.00 0.00 0.00 6.13
205 206 1.423395 CTCTCCATATTTCTCGCCGC 58.577 55.000 0.00 0.00 0.00 6.53
206 207 1.337260 CCCTCTCCATATTTCTCGCCG 60.337 57.143 0.00 0.00 0.00 6.46
207 208 1.971357 TCCCTCTCCATATTTCTCGCC 59.029 52.381 0.00 0.00 0.00 5.54
208 209 3.753294 TTCCCTCTCCATATTTCTCGC 57.247 47.619 0.00 0.00 0.00 5.03
209 210 4.503991 CCCTTTCCCTCTCCATATTTCTCG 60.504 50.000 0.00 0.00 0.00 4.04
210 211 4.202514 CCCCTTTCCCTCTCCATATTTCTC 60.203 50.000 0.00 0.00 0.00 2.87
211 212 3.724209 CCCCTTTCCCTCTCCATATTTCT 59.276 47.826 0.00 0.00 0.00 2.52
212 213 3.722101 TCCCCTTTCCCTCTCCATATTTC 59.278 47.826 0.00 0.00 0.00 2.17
213 214 3.759755 TCCCCTTTCCCTCTCCATATTT 58.240 45.455 0.00 0.00 0.00 1.40
214 215 3.455085 TCCCCTTTCCCTCTCCATATT 57.545 47.619 0.00 0.00 0.00 1.28
215 216 3.455085 TTCCCCTTTCCCTCTCCATAT 57.545 47.619 0.00 0.00 0.00 1.78
216 217 2.982842 TTCCCCTTTCCCTCTCCATA 57.017 50.000 0.00 0.00 0.00 2.74
217 218 2.139382 GATTCCCCTTTCCCTCTCCAT 58.861 52.381 0.00 0.00 0.00 3.41
218 219 1.596496 GATTCCCCTTTCCCTCTCCA 58.404 55.000 0.00 0.00 0.00 3.86
219 220 0.470341 CGATTCCCCTTTCCCTCTCC 59.530 60.000 0.00 0.00 0.00 3.71
220 221 0.470341 CCGATTCCCCTTTCCCTCTC 59.530 60.000 0.00 0.00 0.00 3.20
221 222 0.988678 CCCGATTCCCCTTTCCCTCT 60.989 60.000 0.00 0.00 0.00 3.69
222 223 1.279749 ACCCGATTCCCCTTTCCCTC 61.280 60.000 0.00 0.00 0.00 4.30
223 224 1.230182 ACCCGATTCCCCTTTCCCT 60.230 57.895 0.00 0.00 0.00 4.20
224 225 1.076995 CACCCGATTCCCCTTTCCC 60.077 63.158 0.00 0.00 0.00 3.97
225 226 1.076995 CCACCCGATTCCCCTTTCC 60.077 63.158 0.00 0.00 0.00 3.13
226 227 1.753078 GCCACCCGATTCCCCTTTC 60.753 63.158 0.00 0.00 0.00 2.62
227 228 2.211468 GAGCCACCCGATTCCCCTTT 62.211 60.000 0.00 0.00 0.00 3.11
228 229 2.614013 AGCCACCCGATTCCCCTT 60.614 61.111 0.00 0.00 0.00 3.95
229 230 3.090532 GAGCCACCCGATTCCCCT 61.091 66.667 0.00 0.00 0.00 4.79
230 231 4.547367 CGAGCCACCCGATTCCCC 62.547 72.222 0.00 0.00 0.00 4.81
251 252 3.485745 AAACCCTATCCCCCGCCG 61.486 66.667 0.00 0.00 0.00 6.46
252 253 2.194868 CAAACCCTATCCCCCGCC 59.805 66.667 0.00 0.00 0.00 6.13
253 254 2.194868 CCAAACCCTATCCCCCGC 59.805 66.667 0.00 0.00 0.00 6.13
254 255 1.530283 GTCCAAACCCTATCCCCCG 59.470 63.158 0.00 0.00 0.00 5.73
255 256 1.928199 GGTCCAAACCCTATCCCCC 59.072 63.158 0.00 0.00 39.93 5.40
264 265 1.365999 CCTTTTGCGGGTCCAAACC 59.634 57.895 0.00 0.00 45.65 3.27
265 266 1.365999 CCCTTTTGCGGGTCCAAAC 59.634 57.895 0.00 0.00 39.51 2.93
266 267 3.863606 CCCTTTTGCGGGTCCAAA 58.136 55.556 0.00 0.00 39.51 3.28
275 276 1.136774 GATTCCGCGACCCTTTTGC 59.863 57.895 8.23 0.00 0.00 3.68
276 277 1.423845 CGATTCCGCGACCCTTTTG 59.576 57.895 8.23 0.00 0.00 2.44
277 278 3.884900 CGATTCCGCGACCCTTTT 58.115 55.556 8.23 0.00 0.00 2.27
287 288 2.726760 GAGCACTATAACTGCGATTCCG 59.273 50.000 0.00 0.00 39.79 4.30
288 289 2.726760 CGAGCACTATAACTGCGATTCC 59.273 50.000 0.00 0.00 39.79 3.01
289 290 2.726760 CCGAGCACTATAACTGCGATTC 59.273 50.000 0.00 0.00 39.79 2.52
290 291 2.545952 CCCGAGCACTATAACTGCGATT 60.546 50.000 0.00 0.00 39.79 3.34
291 292 1.000163 CCCGAGCACTATAACTGCGAT 60.000 52.381 0.00 0.00 39.79 4.58
292 293 0.384309 CCCGAGCACTATAACTGCGA 59.616 55.000 0.00 0.00 39.79 5.10
293 294 0.597637 CCCCGAGCACTATAACTGCG 60.598 60.000 0.00 0.00 39.79 5.18
294 295 0.880718 GCCCCGAGCACTATAACTGC 60.881 60.000 0.00 0.00 42.97 4.40
295 296 0.597637 CGCCCCGAGCACTATAACTG 60.598 60.000 0.00 0.00 44.04 3.16
296 297 1.041447 ACGCCCCGAGCACTATAACT 61.041 55.000 0.00 0.00 44.04 2.24
297 298 0.874607 CACGCCCCGAGCACTATAAC 60.875 60.000 0.00 0.00 44.04 1.89
298 299 1.440060 CACGCCCCGAGCACTATAA 59.560 57.895 0.00 0.00 44.04 0.98
299 300 3.125607 CACGCCCCGAGCACTATA 58.874 61.111 0.00 0.00 44.04 1.31
300 301 4.530857 GCACGCCCCGAGCACTAT 62.531 66.667 2.35 0.00 42.44 2.12
323 324 4.740431 ATTTTTGCCGCAGCCCGC 62.740 61.111 0.00 0.00 38.69 6.13
324 325 1.227342 AAAATTTTTGCCGCAGCCCG 61.227 50.000 0.00 0.00 38.69 6.13
325 326 0.950836 AAAAATTTTTGCCGCAGCCC 59.049 45.000 15.25 0.00 38.69 5.19
326 327 2.035174 CAAAAATTTTTGCCGCAGCC 57.965 45.000 26.05 0.00 40.76 4.85
335 336 0.886938 CCCGGCCCGCAAAAATTTTT 60.887 50.000 10.41 10.41 0.00 1.94
336 337 1.302112 CCCGGCCCGCAAAAATTTT 60.302 52.632 0.00 0.00 0.00 1.82
337 338 2.345617 CCCGGCCCGCAAAAATTT 59.654 55.556 0.00 0.00 0.00 1.82
338 339 4.386951 GCCCGGCCCGCAAAAATT 62.387 61.111 0.00 0.00 0.00 1.82
349 350 3.876198 CACGCATACTTGCCCGGC 61.876 66.667 1.04 1.04 46.57 6.13
350 351 3.876198 GCACGCATACTTGCCCGG 61.876 66.667 0.00 0.00 46.57 5.73
351 352 2.813179 GAGCACGCATACTTGCCCG 61.813 63.158 0.00 0.00 46.57 6.13
352 353 1.450312 AGAGCACGCATACTTGCCC 60.450 57.895 0.00 0.00 46.57 5.36
353 354 1.021390 ACAGAGCACGCATACTTGCC 61.021 55.000 0.00 0.00 46.57 4.52
354 355 0.798776 AACAGAGCACGCATACTTGC 59.201 50.000 0.00 0.00 45.78 4.01
355 356 2.093310 CAGAACAGAGCACGCATACTTG 59.907 50.000 0.00 0.00 0.00 3.16
356 357 2.341257 CAGAACAGAGCACGCATACTT 58.659 47.619 0.00 0.00 0.00 2.24
357 358 1.404717 CCAGAACAGAGCACGCATACT 60.405 52.381 0.00 0.00 0.00 2.12
358 359 1.002366 CCAGAACAGAGCACGCATAC 58.998 55.000 0.00 0.00 0.00 2.39
359 360 0.740868 GCCAGAACAGAGCACGCATA 60.741 55.000 0.00 0.00 0.00 3.14
360 361 2.037136 GCCAGAACAGAGCACGCAT 61.037 57.895 0.00 0.00 0.00 4.73
361 362 1.815817 TAGCCAGAACAGAGCACGCA 61.816 55.000 0.00 0.00 0.00 5.24
362 363 1.079819 TAGCCAGAACAGAGCACGC 60.080 57.895 0.00 0.00 0.00 5.34
363 364 0.528017 TCTAGCCAGAACAGAGCACG 59.472 55.000 0.00 0.00 0.00 5.34
364 365 2.751166 TTCTAGCCAGAACAGAGCAC 57.249 50.000 0.00 0.00 35.82 4.40
365 366 3.769739 TTTTCTAGCCAGAACAGAGCA 57.230 42.857 0.00 0.00 40.54 4.26
366 367 4.142513 CCAATTTTCTAGCCAGAACAGAGC 60.143 45.833 0.00 0.00 40.54 4.09
367 368 4.397417 CCCAATTTTCTAGCCAGAACAGAG 59.603 45.833 0.00 0.00 40.54 3.35
368 369 4.335416 CCCAATTTTCTAGCCAGAACAGA 58.665 43.478 0.00 0.00 40.54 3.41
369 370 3.119352 GCCCAATTTTCTAGCCAGAACAG 60.119 47.826 0.00 0.00 40.54 3.16
370 371 2.825532 GCCCAATTTTCTAGCCAGAACA 59.174 45.455 0.00 0.00 40.54 3.18
371 372 2.166459 GGCCCAATTTTCTAGCCAGAAC 59.834 50.000 0.00 0.00 40.54 3.01
372 373 2.456577 GGCCCAATTTTCTAGCCAGAA 58.543 47.619 0.00 0.00 43.32 3.02
373 374 1.681780 CGGCCCAATTTTCTAGCCAGA 60.682 52.381 0.00 0.00 44.06 3.86
374 375 0.740737 CGGCCCAATTTTCTAGCCAG 59.259 55.000 0.00 0.00 44.06 4.85
375 376 0.329931 TCGGCCCAATTTTCTAGCCA 59.670 50.000 0.00 0.00 44.06 4.75
376 377 1.025041 CTCGGCCCAATTTTCTAGCC 58.975 55.000 0.00 0.00 40.33 3.93
377 378 1.025041 CCTCGGCCCAATTTTCTAGC 58.975 55.000 0.00 0.00 0.00 3.42
378 379 1.025041 GCCTCGGCCCAATTTTCTAG 58.975 55.000 0.00 0.00 34.56 2.43
379 380 3.184736 GCCTCGGCCCAATTTTCTA 57.815 52.632 0.00 0.00 34.56 2.10
380 381 4.018409 GCCTCGGCCCAATTTTCT 57.982 55.556 0.00 0.00 34.56 2.52
390 391 3.414700 CGAATATGCGGCCTCGGC 61.415 66.667 0.00 0.00 41.06 5.54
391 392 3.414700 GCGAATATGCGGCCTCGG 61.415 66.667 4.99 0.00 36.79 4.63
397 398 0.591170 AAATTCCGGCGAATATGCGG 59.409 50.000 9.30 0.00 37.76 5.69
398 399 2.399396 AAAATTCCGGCGAATATGCG 57.601 45.000 9.30 0.00 37.76 4.73
399 400 2.218530 GCAAAAATTCCGGCGAATATGC 59.781 45.455 9.30 13.20 37.76 3.14
407 408 0.793104 CGTCTCGCAAAAATTCCGGC 60.793 55.000 0.00 0.00 0.00 6.13
408 409 0.179200 CCGTCTCGCAAAAATTCCGG 60.179 55.000 0.00 0.00 0.00 5.14
409 410 0.179200 CCCGTCTCGCAAAAATTCCG 60.179 55.000 0.00 0.00 0.00 4.30
410 411 0.456142 GCCCGTCTCGCAAAAATTCC 60.456 55.000 0.00 0.00 0.00 3.01
411 412 0.793104 CGCCCGTCTCGCAAAAATTC 60.793 55.000 0.00 0.00 0.00 2.17
412 413 1.209127 CGCCCGTCTCGCAAAAATT 59.791 52.632 0.00 0.00 0.00 1.82
413 414 1.512156 AACGCCCGTCTCGCAAAAAT 61.512 50.000 0.00 0.00 0.00 1.82
414 415 1.716826 AAACGCCCGTCTCGCAAAAA 61.717 50.000 0.00 0.00 0.00 1.94
415 416 1.716826 AAAACGCCCGTCTCGCAAAA 61.717 50.000 0.00 0.00 0.00 2.44
416 417 0.879400 TAAAACGCCCGTCTCGCAAA 60.879 50.000 0.00 0.00 0.00 3.68
417 418 1.300775 TAAAACGCCCGTCTCGCAA 60.301 52.632 0.00 0.00 0.00 4.85
418 419 2.023223 GTAAAACGCCCGTCTCGCA 61.023 57.895 0.00 0.00 0.00 5.10
419 420 0.456653 TAGTAAAACGCCCGTCTCGC 60.457 55.000 0.00 0.00 0.00 5.03
420 421 1.542544 CTAGTAAAACGCCCGTCTCG 58.457 55.000 0.00 0.00 0.00 4.04
421 422 1.203287 ACCTAGTAAAACGCCCGTCTC 59.797 52.381 0.00 0.00 0.00 3.36
422 423 1.203287 GACCTAGTAAAACGCCCGTCT 59.797 52.381 0.00 0.00 0.00 4.18
423 424 1.203287 AGACCTAGTAAAACGCCCGTC 59.797 52.381 0.00 0.00 0.00 4.79
424 425 1.067354 CAGACCTAGTAAAACGCCCGT 60.067 52.381 0.00 0.00 0.00 5.28
425 426 1.636988 CAGACCTAGTAAAACGCCCG 58.363 55.000 0.00 0.00 0.00 6.13
426 427 1.066358 AGCAGACCTAGTAAAACGCCC 60.066 52.381 0.00 0.00 0.00 6.13
427 428 2.381725 AGCAGACCTAGTAAAACGCC 57.618 50.000 0.00 0.00 0.00 5.68
428 429 4.142425 ACTCTAGCAGACCTAGTAAAACGC 60.142 45.833 0.00 0.00 43.36 4.84
429 430 5.564048 ACTCTAGCAGACCTAGTAAAACG 57.436 43.478 0.00 0.00 43.36 3.60
430 431 5.577554 GCAACTCTAGCAGACCTAGTAAAAC 59.422 44.000 0.00 0.00 43.36 2.43
431 432 5.480772 AGCAACTCTAGCAGACCTAGTAAAA 59.519 40.000 0.00 0.00 43.36 1.52
432 433 5.017490 AGCAACTCTAGCAGACCTAGTAAA 58.983 41.667 0.00 0.00 43.36 2.01
433 434 4.601084 AGCAACTCTAGCAGACCTAGTAA 58.399 43.478 0.00 0.00 43.36 2.24
434 435 4.080243 AGAGCAACTCTAGCAGACCTAGTA 60.080 45.833 0.00 0.00 43.36 1.82
435 436 3.020984 GAGCAACTCTAGCAGACCTAGT 58.979 50.000 0.00 0.00 43.36 2.57
436 437 3.287222 AGAGCAACTCTAGCAGACCTAG 58.713 50.000 0.00 0.00 44.09 3.02
437 438 3.374042 AGAGCAACTCTAGCAGACCTA 57.626 47.619 0.00 0.00 39.28 3.08
438 439 2.230130 AGAGCAACTCTAGCAGACCT 57.770 50.000 0.00 0.00 39.28 3.85
439 440 3.736740 GCTAAGAGCAACTCTAGCAGACC 60.737 52.174 15.23 0.00 40.28 3.85
440 441 3.443976 GCTAAGAGCAACTCTAGCAGAC 58.556 50.000 15.23 2.78 40.28 3.51
441 442 3.791973 GCTAAGAGCAACTCTAGCAGA 57.208 47.619 15.23 0.00 40.28 4.26
453 454 2.564771 TGCCACATGTATGCTAAGAGC 58.435 47.619 17.45 0.00 42.82 4.09
454 455 4.383173 TGATGCCACATGTATGCTAAGAG 58.617 43.478 17.45 0.00 0.00 2.85
455 456 4.420522 TGATGCCACATGTATGCTAAGA 57.579 40.909 17.45 1.59 0.00 2.10
456 457 5.276270 GTTTGATGCCACATGTATGCTAAG 58.724 41.667 17.45 0.00 0.00 2.18
457 458 4.097741 GGTTTGATGCCACATGTATGCTAA 59.902 41.667 17.45 9.43 0.00 3.09
458 459 3.631686 GGTTTGATGCCACATGTATGCTA 59.368 43.478 17.45 7.34 0.00 3.49
459 460 2.428171 GGTTTGATGCCACATGTATGCT 59.572 45.455 17.45 6.26 0.00 3.79
460 461 2.166050 TGGTTTGATGCCACATGTATGC 59.834 45.455 11.55 11.55 0.00 3.14
461 462 4.453177 TTGGTTTGATGCCACATGTATG 57.547 40.909 0.00 0.00 35.46 2.39
465 466 3.927854 TGATTTGGTTTGATGCCACATG 58.072 40.909 0.00 0.00 35.46 3.21
653 657 1.810606 CTCAGTGGAGGTGACAGCGT 61.811 60.000 0.00 0.00 37.51 5.07
657 661 2.574018 CGGCTCAGTGGAGGTGACA 61.574 63.158 0.00 0.00 41.67 3.58
658 662 2.262915 CGGCTCAGTGGAGGTGAC 59.737 66.667 0.00 0.00 41.67 3.67
701 706 2.047274 CAGCTCGCCGGAAAAGGA 60.047 61.111 5.05 0.00 0.00 3.36
770 776 2.034879 CGCATTTGCTGTCCCTCGT 61.035 57.895 0.51 0.00 39.32 4.18
771 777 1.577328 AACGCATTTGCTGTCCCTCG 61.577 55.000 0.51 0.00 39.32 4.63
835 841 2.352032 GGCCAGCACCGTCTCTAGT 61.352 63.158 0.00 0.00 0.00 2.57
896 902 1.462616 TCTTACCGACGGGAATTCGA 58.537 50.000 20.00 7.03 38.85 3.71
990 996 4.320456 CCCGCCATGGATCCGGAG 62.320 72.222 25.56 14.38 44.55 4.63
1039 1045 2.335712 GGCCGCAGAAACCCTGAAG 61.336 63.158 0.00 0.00 45.78 3.02
1227 1233 6.728632 GGTCCTCCTCCTGATAATAAGAGAAT 59.271 42.308 0.00 0.00 0.00 2.40
1286 1292 4.794439 TCGTGCACAGATCGCCCG 62.794 66.667 18.64 0.00 0.00 6.13
1310 1316 0.674895 CCCCGTTCTCCAAAGCTGAG 60.675 60.000 0.00 0.00 0.00 3.35
1312 1318 0.955919 GACCCCGTTCTCCAAAGCTG 60.956 60.000 0.00 0.00 0.00 4.24
1313 1319 1.375326 GACCCCGTTCTCCAAAGCT 59.625 57.895 0.00 0.00 0.00 3.74
1315 1321 2.033194 GCGACCCCGTTCTCCAAAG 61.033 63.158 0.00 0.00 38.24 2.77
1346 1352 4.864334 CCATGCCGGAGCTGACCC 62.864 72.222 5.05 0.00 40.80 4.46
1528 1534 2.983192 TCCACCCAACCATAGAAGAACA 59.017 45.455 0.00 0.00 0.00 3.18
1547 1553 2.248248 TCTCCATATCCCACGATGTCC 58.752 52.381 0.00 0.00 0.00 4.02
1587 1593 3.003173 CTGGCCACCGGGAGAGAA 61.003 66.667 0.00 0.00 35.59 2.87
1655 1712 0.094901 ATCGTCGTCGTCGTCTTCAG 59.905 55.000 11.41 0.00 38.33 3.02
1741 1798 1.219124 GCAACTCCTCATCCGAGCA 59.781 57.895 0.00 0.00 38.00 4.26
1756 1813 0.815095 TTCTCCGCGACTATCTGCAA 59.185 50.000 8.23 0.00 0.00 4.08
1810 1867 5.178996 TCCACAAAATCAAATTGCAATTCCG 59.821 36.000 24.28 17.92 0.00 4.30
1848 1907 6.069323 TGCCCTGAAATATAACAAGGAGGTAA 60.069 38.462 0.00 0.00 0.00 2.85
1895 1956 5.401550 TCCAAATCACTTTGCAAATCGATC 58.598 37.500 13.23 0.00 40.39 3.69
1933 1994 8.347004 TCAGTTATGCTTATCACCAAATTCAA 57.653 30.769 0.00 0.00 0.00 2.69
2054 2115 8.085296 TGTCAACTTTGTTGTCAACTAAAACAT 58.915 29.630 16.45 0.00 34.04 2.71
2056 2117 7.861176 TGTCAACTTTGTTGTCAACTAAAAC 57.139 32.000 16.45 10.69 32.93 2.43
2074 2135 9.226345 CTAAACTCTGAAATGTCTTTTGTCAAC 57.774 33.333 0.00 0.00 0.00 3.18
2083 2144 5.753721 AGCTCCTAAACTCTGAAATGTCT 57.246 39.130 0.00 0.00 0.00 3.41
2282 2351 1.489649 CAGAAGCATCAGGGAGTGGAT 59.510 52.381 0.00 0.00 0.00 3.41
2299 2370 6.957853 ATCATTATGTATCACATCCCCAGA 57.042 37.500 0.00 0.00 39.88 3.86
2328 2399 6.393990 ACAAACATACTCTCTACTCTGCTTG 58.606 40.000 0.00 0.00 0.00 4.01
2346 2417 7.646922 GCAATGAAATGCCATTTAAAACAAACA 59.353 29.630 1.95 0.00 40.49 2.83
2347 2418 7.994934 GCAATGAAATGCCATTTAAAACAAAC 58.005 30.769 1.95 0.00 40.49 2.93
2374 2445 5.565592 CAGTAGCACTGCATTTGGAAATA 57.434 39.130 3.30 0.00 39.62 1.40
2439 2510 3.744719 TCGCCAACCGAGAGACCG 61.745 66.667 0.00 0.00 41.89 4.79
2533 2604 3.190118 GCAGTTTCTGTTTCTGGATGAGG 59.810 47.826 0.00 0.00 33.43 3.86
2582 2671 3.153919 TGATTGCTAAGAAAAAGGCGGT 58.846 40.909 0.00 0.00 0.00 5.68
2877 2984 2.260434 GCACTGTGGGCATTGCTG 59.740 61.111 10.21 0.00 44.62 4.41
2919 3029 1.510480 GCCTTGGTGCACTGACAGTC 61.510 60.000 17.98 1.74 0.00 3.51
3058 3168 2.096248 AGACTGAGCACTGCTAGTACC 58.904 52.381 2.71 0.00 39.88 3.34
3059 3169 3.143807 CAGACTGAGCACTGCTAGTAC 57.856 52.381 2.71 0.00 39.88 2.73
3066 3176 1.875009 TTTGAGCAGACTGAGCACTG 58.125 50.000 6.65 3.47 37.22 3.66
3067 3177 2.855209 ATTTGAGCAGACTGAGCACT 57.145 45.000 6.65 0.00 0.00 4.40
3068 3178 3.999663 AGTAATTTGAGCAGACTGAGCAC 59.000 43.478 6.65 0.00 0.00 4.40
3069 3179 4.248859 GAGTAATTTGAGCAGACTGAGCA 58.751 43.478 6.65 0.00 0.00 4.26
3070 3180 4.092675 GTGAGTAATTTGAGCAGACTGAGC 59.907 45.833 6.65 0.00 0.00 4.26
3071 3181 4.629200 GGTGAGTAATTTGAGCAGACTGAG 59.371 45.833 6.65 0.00 0.00 3.35
3072 3182 4.563580 GGGTGAGTAATTTGAGCAGACTGA 60.564 45.833 6.65 0.00 0.00 3.41
3073 3183 3.686726 GGGTGAGTAATTTGAGCAGACTG 59.313 47.826 0.00 0.00 0.00 3.51
3074 3184 3.327757 TGGGTGAGTAATTTGAGCAGACT 59.672 43.478 0.00 0.00 0.00 3.24
3075 3185 3.674997 TGGGTGAGTAATTTGAGCAGAC 58.325 45.455 0.00 0.00 0.00 3.51
3076 3186 3.327757 ACTGGGTGAGTAATTTGAGCAGA 59.672 43.478 0.00 0.00 30.86 4.26
3077 3187 3.679389 ACTGGGTGAGTAATTTGAGCAG 58.321 45.455 0.00 0.00 30.86 4.24
3078 3188 3.788227 ACTGGGTGAGTAATTTGAGCA 57.212 42.857 0.00 0.00 30.86 4.26
3079 3189 5.086104 TCTACTGGGTGAGTAATTTGAGC 57.914 43.478 0.00 0.00 36.69 4.26
3080 3190 5.112686 GCTCTACTGGGTGAGTAATTTGAG 58.887 45.833 0.00 0.00 36.69 3.02
3081 3191 4.081087 GGCTCTACTGGGTGAGTAATTTGA 60.081 45.833 0.00 0.00 36.69 2.69
3082 3192 4.192317 GGCTCTACTGGGTGAGTAATTTG 58.808 47.826 0.00 0.00 36.69 2.32
3083 3193 3.844211 TGGCTCTACTGGGTGAGTAATTT 59.156 43.478 0.00 0.00 36.69 1.82
3084 3194 3.450904 TGGCTCTACTGGGTGAGTAATT 58.549 45.455 0.00 0.00 36.69 1.40
3085 3195 3.116096 TGGCTCTACTGGGTGAGTAAT 57.884 47.619 0.00 0.00 36.69 1.89
3086 3196 2.565834 GTTGGCTCTACTGGGTGAGTAA 59.434 50.000 0.00 0.00 36.69 2.24
3087 3197 2.176889 GTTGGCTCTACTGGGTGAGTA 58.823 52.381 0.00 0.00 35.96 2.59
3088 3198 0.977395 GTTGGCTCTACTGGGTGAGT 59.023 55.000 0.00 0.00 38.88 3.41
3089 3199 1.066573 CAGTTGGCTCTACTGGGTGAG 60.067 57.143 8.24 0.00 39.42 3.51
3090 3200 0.976641 CAGTTGGCTCTACTGGGTGA 59.023 55.000 8.24 0.00 39.42 4.02
3091 3201 0.687354 ACAGTTGGCTCTACTGGGTG 59.313 55.000 16.45 0.00 45.67 4.61
3092 3202 0.977395 GACAGTTGGCTCTACTGGGT 59.023 55.000 16.45 2.39 45.67 4.51
3093 3203 0.976641 TGACAGTTGGCTCTACTGGG 59.023 55.000 16.45 0.00 45.67 4.45
3094 3204 1.620819 ACTGACAGTTGGCTCTACTGG 59.379 52.381 16.45 6.12 45.67 4.00
3095 3205 2.681706 CACTGACAGTTGGCTCTACTG 58.318 52.381 5.04 12.59 46.56 2.74
3096 3206 1.001406 GCACTGACAGTTGGCTCTACT 59.999 52.381 5.04 0.00 0.00 2.57
3097 3207 1.270305 TGCACTGACAGTTGGCTCTAC 60.270 52.381 16.33 0.00 0.00 2.59
3098 3208 1.001293 CTGCACTGACAGTTGGCTCTA 59.999 52.381 16.33 0.00 32.78 2.43
3099 3209 0.250209 CTGCACTGACAGTTGGCTCT 60.250 55.000 16.33 0.00 32.78 4.09
3100 3210 1.849976 GCTGCACTGACAGTTGGCTC 61.850 60.000 16.33 7.06 39.96 4.70
3101 3211 1.895707 GCTGCACTGACAGTTGGCT 60.896 57.895 16.33 0.00 39.96 4.75
3102 3212 1.727511 TTGCTGCACTGACAGTTGGC 61.728 55.000 5.04 8.18 39.96 4.52
3103 3213 0.309922 CTTGCTGCACTGACAGTTGG 59.690 55.000 5.04 0.00 39.96 3.77
3104 3214 1.263484 CTCTTGCTGCACTGACAGTTG 59.737 52.381 5.04 3.12 39.96 3.16
3105 3215 1.590932 CTCTTGCTGCACTGACAGTT 58.409 50.000 5.04 0.00 39.96 3.16
3106 3216 0.883814 GCTCTTGCTGCACTGACAGT 60.884 55.000 0.00 1.07 39.96 3.55
3107 3217 0.883370 TGCTCTTGCTGCACTGACAG 60.883 55.000 0.00 0.00 40.80 3.51
3108 3218 0.250597 ATGCTCTTGCTGCACTGACA 60.251 50.000 0.00 0.00 43.59 3.58
3109 3219 1.396301 GTATGCTCTTGCTGCACTGAC 59.604 52.381 0.00 0.00 43.59 3.51
3110 3220 1.277273 AGTATGCTCTTGCTGCACTGA 59.723 47.619 0.00 2.93 43.59 3.41
3111 3221 1.664659 GAGTATGCTCTTGCTGCACTG 59.335 52.381 0.00 0.00 43.59 3.66
3112 3222 2.021355 GAGTATGCTCTTGCTGCACT 57.979 50.000 0.00 0.00 43.59 4.40
3125 3235 2.676839 CCAGTTCTTGCTGCAGAGTATG 59.323 50.000 20.43 5.83 35.28 2.39
3126 3236 2.568956 TCCAGTTCTTGCTGCAGAGTAT 59.431 45.455 20.43 0.00 35.28 2.12
3127 3237 1.970640 TCCAGTTCTTGCTGCAGAGTA 59.029 47.619 20.43 0.00 35.28 2.59
3128 3238 0.761187 TCCAGTTCTTGCTGCAGAGT 59.239 50.000 20.43 0.00 35.28 3.24
3129 3239 1.805345 CTTCCAGTTCTTGCTGCAGAG 59.195 52.381 20.43 7.04 35.28 3.35
3130 3240 1.417517 TCTTCCAGTTCTTGCTGCAGA 59.582 47.619 20.43 0.00 35.28 4.26
3131 3241 1.805345 CTCTTCCAGTTCTTGCTGCAG 59.195 52.381 10.11 10.11 35.28 4.41
3132 3242 1.544093 CCTCTTCCAGTTCTTGCTGCA 60.544 52.381 0.00 0.00 35.28 4.41
3133 3243 1.163554 CCTCTTCCAGTTCTTGCTGC 58.836 55.000 0.00 0.00 35.28 5.25
3134 3244 2.557920 ACCTCTTCCAGTTCTTGCTG 57.442 50.000 0.00 0.00 36.31 4.41
3135 3245 3.243724 AGTACCTCTTCCAGTTCTTGCT 58.756 45.455 0.00 0.00 0.00 3.91
3136 3246 3.686916 AGTACCTCTTCCAGTTCTTGC 57.313 47.619 0.00 0.00 0.00 4.01
3137 3247 4.220821 TGCTAGTACCTCTTCCAGTTCTTG 59.779 45.833 0.00 0.00 0.00 3.02
3138 3248 4.417437 TGCTAGTACCTCTTCCAGTTCTT 58.583 43.478 0.00 0.00 0.00 2.52
3139 3249 4.020543 CTGCTAGTACCTCTTCCAGTTCT 58.979 47.826 0.00 0.00 0.00 3.01
3140 3250 3.764972 ACTGCTAGTACCTCTTCCAGTTC 59.235 47.826 0.00 0.00 34.78 3.01
3141 3251 3.511934 CACTGCTAGTACCTCTTCCAGTT 59.488 47.826 0.00 0.00 35.58 3.16
3142 3252 3.093057 CACTGCTAGTACCTCTTCCAGT 58.907 50.000 0.00 0.00 37.02 4.00
3143 3253 2.159170 GCACTGCTAGTACCTCTTCCAG 60.159 54.545 0.00 0.00 32.84 3.86
3144 3254 1.825474 GCACTGCTAGTACCTCTTCCA 59.175 52.381 0.00 0.00 0.00 3.53
3145 3255 2.100087 GAGCACTGCTAGTACCTCTTCC 59.900 54.545 2.71 0.00 39.88 3.46
3146 3256 2.755655 TGAGCACTGCTAGTACCTCTTC 59.244 50.000 2.71 0.00 39.88 2.87
3147 3257 2.757868 CTGAGCACTGCTAGTACCTCTT 59.242 50.000 2.71 0.00 39.88 2.85
3148 3258 2.291282 ACTGAGCACTGCTAGTACCTCT 60.291 50.000 2.71 0.00 39.88 3.69
3149 3259 2.096248 ACTGAGCACTGCTAGTACCTC 58.904 52.381 2.71 0.00 39.88 3.85
3150 3260 2.096248 GACTGAGCACTGCTAGTACCT 58.904 52.381 2.71 0.00 39.88 3.08
3251 3379 3.628032 GGGGTAAGTAATTTGAGCAGAGC 59.372 47.826 0.00 0.00 0.00 4.09
3610 4157 4.312443 CAGCACAAGCATCCTTTGAAAAT 58.688 39.130 0.00 0.00 45.49 1.82
3659 4206 8.668510 ACAAATAGATGAGTAATGATCCACAC 57.331 34.615 0.00 0.00 0.00 3.82
3873 4499 3.255395 ACTCACAGAGCCATGATAGATCG 59.745 47.826 0.00 0.00 32.04 3.69
3914 4540 7.839680 ATAAAATAAACTAGCCCCATCAAGG 57.160 36.000 0.00 0.00 37.03 3.61
3916 4542 9.930158 AGTTATAAAATAAACTAGCCCCATCAA 57.070 29.630 0.00 0.00 34.23 2.57
3917 4543 9.930158 AAGTTATAAAATAAACTAGCCCCATCA 57.070 29.630 0.00 0.00 34.91 3.07
4110 4752 9.823098 GAAGCTCAATGCATAATATTTCTAGTG 57.177 33.333 0.00 0.00 45.94 2.74
4155 4808 3.557054 CCATACATCCCCTGTAATGTCCG 60.557 52.174 0.00 0.00 43.42 4.79
4289 4948 3.637273 AGCCGAGGGTTGTCCACC 61.637 66.667 0.00 0.00 46.46 4.61
4417 5079 1.516603 GCCTTGTACGACTCCTCGC 60.517 63.158 0.00 0.00 44.33 5.03
4476 5138 1.939934 TCAAGCTGACACTGAAAACCG 59.060 47.619 0.00 0.00 0.00 4.44
4505 5167 0.905357 AGTGAGAACCAGATTCCCGG 59.095 55.000 0.00 0.00 38.16 5.73
4559 5221 0.178992 CCCTTGCAACCTTCACTCCA 60.179 55.000 0.00 0.00 0.00 3.86
4602 5264 1.988107 AGGAATCTGGTTGCCAAGAGA 59.012 47.619 0.00 0.00 30.80 3.10
4608 5270 0.620556 TCAGGAGGAATCTGGTTGCC 59.379 55.000 0.00 0.00 33.36 4.52
4626 5288 4.072131 TGGTTTTGACTGGCAGTATTCTC 58.928 43.478 22.11 8.30 0.00 2.87
4632 5294 1.846007 TGTTGGTTTTGACTGGCAGT 58.154 45.000 22.26 22.26 0.00 4.40
4636 5298 2.159128 TGTGCATGTTGGTTTTGACTGG 60.159 45.455 0.00 0.00 0.00 4.00
4652 5314 1.943968 GCTCCAACCGAAGTATGTGCA 60.944 52.381 0.00 0.00 0.00 4.57
4687 5349 1.745115 GGCGCACTGATAGTTGGCA 60.745 57.895 10.83 0.00 30.13 4.92
4695 5357 0.178767 TATGCTCTTGGCGCACTGAT 59.821 50.000 10.83 0.00 45.43 2.90
4750 5412 3.390135 CGAGTAACTTGAGCAGTGGAAA 58.610 45.455 0.00 0.00 35.12 3.13
4760 5422 2.703416 TCTAGTCGGCGAGTAACTTGA 58.297 47.619 23.28 14.87 0.00 3.02
4771 5433 1.476891 TGACAGTTGGATCTAGTCGGC 59.523 52.381 0.00 0.00 32.08 5.54
4781 5443 2.503765 TCTTGGTGAACTGACAGTTGGA 59.496 45.455 25.20 8.90 38.80 3.53
4790 5452 3.935993 ACCCGATCTTGGTGAACTG 57.064 52.632 3.20 0.00 33.94 3.16
4802 5464 3.131223 CGAGCATCCTATATTCACCCGAT 59.869 47.826 0.00 0.00 0.00 4.18
4803 5465 2.492088 CGAGCATCCTATATTCACCCGA 59.508 50.000 0.00 0.00 0.00 5.14
4808 5470 2.832129 GGGACCGAGCATCCTATATTCA 59.168 50.000 0.00 0.00 36.40 2.57
4815 5477 0.178975 CTAGAGGGACCGAGCATCCT 60.179 60.000 0.00 0.00 36.40 3.24
4816 5478 0.468400 ACTAGAGGGACCGAGCATCC 60.468 60.000 0.00 0.00 35.28 3.51
4820 5482 1.404843 ATCAACTAGAGGGACCGAGC 58.595 55.000 0.00 0.00 0.00 5.03
4821 5483 3.024547 TCAATCAACTAGAGGGACCGAG 58.975 50.000 0.00 0.00 0.00 4.63
4822 5484 2.758979 GTCAATCAACTAGAGGGACCGA 59.241 50.000 0.00 0.00 30.91 4.69
4823 5485 2.159085 GGTCAATCAACTAGAGGGACCG 60.159 54.545 0.00 0.00 41.00 4.79
4824 5486 3.108376 AGGTCAATCAACTAGAGGGACC 58.892 50.000 0.00 0.00 46.19 4.46
4825 5487 4.828072 AAGGTCAATCAACTAGAGGGAC 57.172 45.455 0.00 0.00 34.33 4.46
4826 5488 4.019321 CCAAAGGTCAATCAACTAGAGGGA 60.019 45.833 0.00 0.00 0.00 4.20
4849 5511 8.685838 TTATGTATAGGCATTGGGTAAAAGAC 57.314 34.615 0.00 0.00 0.00 3.01
4863 5525 9.828852 GTGCGTATATAGAGATTATGTATAGGC 57.171 37.037 0.00 0.00 38.00 3.93
4868 5530 8.674607 CCTGTGTGCGTATATAGAGATTATGTA 58.325 37.037 0.00 0.00 0.00 2.29
4869 5531 7.393515 TCCTGTGTGCGTATATAGAGATTATGT 59.606 37.037 0.00 0.00 0.00 2.29
4871 5533 7.939784 TCCTGTGTGCGTATATAGAGATTAT 57.060 36.000 0.00 0.00 0.00 1.28
4872 5534 7.939784 ATCCTGTGTGCGTATATAGAGATTA 57.060 36.000 0.00 0.00 0.00 1.75
4873 5535 6.842437 ATCCTGTGTGCGTATATAGAGATT 57.158 37.500 0.00 0.00 0.00 2.40
4874 5536 6.661377 AGAATCCTGTGTGCGTATATAGAGAT 59.339 38.462 0.00 0.00 0.00 2.75
4875 5537 6.004574 AGAATCCTGTGTGCGTATATAGAGA 58.995 40.000 0.00 0.00 0.00 3.10
4876 5538 6.260870 AGAATCCTGTGTGCGTATATAGAG 57.739 41.667 0.00 0.00 0.00 2.43
4877 5539 7.754851 TTAGAATCCTGTGTGCGTATATAGA 57.245 36.000 0.00 0.00 0.00 1.98
4879 5541 7.039293 ACCATTAGAATCCTGTGTGCGTATATA 60.039 37.037 0.00 0.00 0.00 0.86
4880 5542 6.166279 CCATTAGAATCCTGTGTGCGTATAT 58.834 40.000 0.00 0.00 0.00 0.86
4881 5543 5.069914 ACCATTAGAATCCTGTGTGCGTATA 59.930 40.000 0.00 0.00 0.00 1.47
4884 5546 2.027192 ACCATTAGAATCCTGTGTGCGT 60.027 45.455 0.00 0.00 0.00 5.24
4886 5548 3.609853 TGACCATTAGAATCCTGTGTGC 58.390 45.455 0.00 0.00 0.00 4.57
4887 5549 4.577693 CCATGACCATTAGAATCCTGTGTG 59.422 45.833 0.00 0.00 0.00 3.82
4889 5551 4.818546 GTCCATGACCATTAGAATCCTGTG 59.181 45.833 0.00 0.00 0.00 3.66
4890 5552 5.041191 GTCCATGACCATTAGAATCCTGT 57.959 43.478 0.00 0.00 0.00 4.00
4904 5566 0.749454 GGCATGTCCTGGTCCATGAC 60.749 60.000 23.70 17.81 40.70 3.06
4905 5567 1.206811 TGGCATGTCCTGGTCCATGA 61.207 55.000 23.70 0.00 40.70 3.07
4906 5568 1.033746 GTGGCATGTCCTGGTCCATG 61.034 60.000 18.47 18.47 41.08 3.66
4907 5569 1.210204 AGTGGCATGTCCTGGTCCAT 61.210 55.000 0.00 0.00 35.26 3.41
4908 5570 1.426251 AAGTGGCATGTCCTGGTCCA 61.426 55.000 0.00 0.00 35.26 4.02
4909 5571 0.251341 AAAGTGGCATGTCCTGGTCC 60.251 55.000 0.00 0.00 35.26 4.46
4910 5572 1.168714 GAAAGTGGCATGTCCTGGTC 58.831 55.000 0.00 0.00 35.26 4.02
4911 5573 0.251341 GGAAAGTGGCATGTCCTGGT 60.251 55.000 0.00 0.00 35.26 4.00
4912 5574 0.038744 AGGAAAGTGGCATGTCCTGG 59.961 55.000 13.80 0.00 39.09 4.45
4913 5575 1.457346 GAGGAAAGTGGCATGTCCTG 58.543 55.000 18.01 0.00 40.67 3.86
4914 5576 0.329596 GGAGGAAAGTGGCATGTCCT 59.670 55.000 14.30 14.30 43.33 3.85
4915 5577 0.681243 GGGAGGAAAGTGGCATGTCC 60.681 60.000 0.00 6.07 0.00 4.02
4916 5578 0.681243 GGGGAGGAAAGTGGCATGTC 60.681 60.000 0.00 0.00 0.00 3.06
4917 5579 1.142688 AGGGGAGGAAAGTGGCATGT 61.143 55.000 0.00 0.00 0.00 3.21
4918 5580 0.040204 AAGGGGAGGAAAGTGGCATG 59.960 55.000 0.00 0.00 0.00 4.06
4919 5581 0.040204 CAAGGGGAGGAAAGTGGCAT 59.960 55.000 0.00 0.00 0.00 4.40
4920 5582 1.065410 TCAAGGGGAGGAAAGTGGCA 61.065 55.000 0.00 0.00 0.00 4.92
4921 5583 0.112412 TTCAAGGGGAGGAAAGTGGC 59.888 55.000 0.00 0.00 0.00 5.01
4922 5584 2.158460 AGTTTCAAGGGGAGGAAAGTGG 60.158 50.000 0.00 0.00 35.83 4.00
4923 5585 3.149981 GAGTTTCAAGGGGAGGAAAGTG 58.850 50.000 0.00 0.00 36.93 3.16
4924 5586 2.108425 GGAGTTTCAAGGGGAGGAAAGT 59.892 50.000 0.00 0.00 38.89 2.66
4925 5587 2.796557 GGAGTTTCAAGGGGAGGAAAG 58.203 52.381 0.00 0.00 33.99 2.62
4926 5588 1.073284 CGGAGTTTCAAGGGGAGGAAA 59.927 52.381 0.00 0.00 0.00 3.13
4927 5589 0.690762 CGGAGTTTCAAGGGGAGGAA 59.309 55.000 0.00 0.00 0.00 3.36
4928 5590 0.473117 ACGGAGTTTCAAGGGGAGGA 60.473 55.000 0.00 0.00 37.78 3.71
4929 5591 2.067197 ACGGAGTTTCAAGGGGAGG 58.933 57.895 0.00 0.00 37.78 4.30
4942 5604 0.951040 GTGCTTGAGGGTCAACGGAG 60.951 60.000 0.00 0.00 32.21 4.63
4943 5605 1.070786 GTGCTTGAGGGTCAACGGA 59.929 57.895 0.00 0.00 32.21 4.69
4944 5606 1.966451 GGTGCTTGAGGGTCAACGG 60.966 63.158 0.00 0.00 32.21 4.44
4945 5607 0.606401 ATGGTGCTTGAGGGTCAACG 60.606 55.000 0.00 0.00 32.21 4.10
4946 5608 2.084546 GTATGGTGCTTGAGGGTCAAC 58.915 52.381 0.00 0.00 32.21 3.18
4947 5609 1.985159 AGTATGGTGCTTGAGGGTCAA 59.015 47.619 0.00 0.00 34.79 3.18
4948 5610 1.555075 GAGTATGGTGCTTGAGGGTCA 59.445 52.381 0.00 0.00 0.00 4.02
4949 5611 1.134371 GGAGTATGGTGCTTGAGGGTC 60.134 57.143 0.00 0.00 0.00 4.46
4950 5612 0.912486 GGAGTATGGTGCTTGAGGGT 59.088 55.000 0.00 0.00 0.00 4.34
4951 5613 0.181350 GGGAGTATGGTGCTTGAGGG 59.819 60.000 0.00 0.00 0.00 4.30
4952 5614 1.207791 AGGGAGTATGGTGCTTGAGG 58.792 55.000 0.00 0.00 0.00 3.86
4953 5615 2.636830 CAAGGGAGTATGGTGCTTGAG 58.363 52.381 0.00 0.00 0.00 3.02
4954 5616 1.340017 GCAAGGGAGTATGGTGCTTGA 60.340 52.381 0.00 0.00 32.43 3.02
4955 5617 1.098050 GCAAGGGAGTATGGTGCTTG 58.902 55.000 0.00 0.00 32.43 4.01
4956 5618 0.034089 GGCAAGGGAGTATGGTGCTT 60.034 55.000 0.00 0.00 35.53 3.91
4957 5619 1.207488 TGGCAAGGGAGTATGGTGCT 61.207 55.000 0.00 0.00 35.53 4.40
4958 5620 0.749454 CTGGCAAGGGAGTATGGTGC 60.749 60.000 0.00 0.00 34.42 5.01
4959 5621 0.620556 ACTGGCAAGGGAGTATGGTG 59.379 55.000 0.00 0.00 0.00 4.17
4960 5622 0.620556 CACTGGCAAGGGAGTATGGT 59.379 55.000 0.00 0.00 0.00 3.55
4961 5623 0.620556 ACACTGGCAAGGGAGTATGG 59.379 55.000 0.00 0.00 0.00 2.74
4962 5624 1.556911 AGACACTGGCAAGGGAGTATG 59.443 52.381 0.00 0.00 0.00 2.39
4963 5625 1.556911 CAGACACTGGCAAGGGAGTAT 59.443 52.381 0.00 0.00 0.00 2.12
4964 5626 0.976641 CAGACACTGGCAAGGGAGTA 59.023 55.000 0.00 0.00 0.00 2.59
4965 5627 1.757306 CAGACACTGGCAAGGGAGT 59.243 57.895 0.00 0.00 0.00 3.85
4966 5628 1.002868 CCAGACACTGGCAAGGGAG 60.003 63.158 0.00 0.00 45.13 4.30
4967 5629 3.160585 CCAGACACTGGCAAGGGA 58.839 61.111 0.00 0.00 45.13 4.20
4975 5637 2.820059 TGTAGCTGAACCAGACACTG 57.180 50.000 0.00 0.00 32.44 3.66
4976 5638 2.094494 CGATGTAGCTGAACCAGACACT 60.094 50.000 0.00 0.00 32.44 3.55
4977 5639 2.263077 CGATGTAGCTGAACCAGACAC 58.737 52.381 0.00 0.00 32.44 3.67
4978 5640 1.893137 ACGATGTAGCTGAACCAGACA 59.107 47.619 0.00 0.00 32.44 3.41
4979 5641 2.094700 TGACGATGTAGCTGAACCAGAC 60.095 50.000 0.00 0.00 32.44 3.51
4980 5642 2.164422 CTGACGATGTAGCTGAACCAGA 59.836 50.000 0.00 0.00 32.44 3.86
4981 5643 2.164422 TCTGACGATGTAGCTGAACCAG 59.836 50.000 0.00 0.00 34.12 4.00
4982 5644 2.167662 TCTGACGATGTAGCTGAACCA 58.832 47.619 0.00 0.00 0.00 3.67
4983 5645 2.941453 TCTGACGATGTAGCTGAACC 57.059 50.000 0.00 0.00 0.00 3.62
4984 5646 2.600867 GCTTCTGACGATGTAGCTGAAC 59.399 50.000 0.00 0.00 0.00 3.18
4985 5647 2.417379 GGCTTCTGACGATGTAGCTGAA 60.417 50.000 0.00 0.00 32.58 3.02
4986 5648 1.135139 GGCTTCTGACGATGTAGCTGA 59.865 52.381 0.00 0.00 32.58 4.26
4987 5649 1.134995 TGGCTTCTGACGATGTAGCTG 60.135 52.381 0.00 0.00 32.58 4.24
4988 5650 1.135915 CTGGCTTCTGACGATGTAGCT 59.864 52.381 0.00 0.00 32.58 3.32
4989 5651 1.134965 ACTGGCTTCTGACGATGTAGC 60.135 52.381 0.00 0.00 0.00 3.58
4990 5652 2.949451 ACTGGCTTCTGACGATGTAG 57.051 50.000 0.00 0.00 0.00 2.74
4991 5653 6.650427 AATATACTGGCTTCTGACGATGTA 57.350 37.500 0.00 0.00 0.00 2.29
4992 5654 5.537300 AATATACTGGCTTCTGACGATGT 57.463 39.130 0.00 0.00 0.00 3.06
4993 5655 5.755375 ACAAATATACTGGCTTCTGACGATG 59.245 40.000 0.00 0.00 0.00 3.84
4994 5656 5.918608 ACAAATATACTGGCTTCTGACGAT 58.081 37.500 0.00 0.00 0.00 3.73
4997 5659 5.675538 AGGACAAATATACTGGCTTCTGAC 58.324 41.667 0.00 0.00 0.00 3.51
5041 5710 4.035278 TGTTTTGACCATTCACGTTTCC 57.965 40.909 0.00 0.00 0.00 3.13
5046 5715 5.280945 ACTGATTTGTTTTGACCATTCACG 58.719 37.500 0.00 0.00 0.00 4.35
5055 5724 8.908786 ATACAGAGAAGACTGATTTGTTTTGA 57.091 30.769 0.00 0.00 40.63 2.69
5056 5725 9.390795 CAATACAGAGAAGACTGATTTGTTTTG 57.609 33.333 0.00 0.00 40.63 2.44
5057 5726 8.078596 GCAATACAGAGAAGACTGATTTGTTTT 58.921 33.333 0.00 0.00 40.63 2.43
5058 5727 7.446625 AGCAATACAGAGAAGACTGATTTGTTT 59.553 33.333 0.00 0.00 40.63 2.83
5059 5728 6.939163 AGCAATACAGAGAAGACTGATTTGTT 59.061 34.615 0.00 0.00 40.63 2.83
5060 5729 6.471146 AGCAATACAGAGAAGACTGATTTGT 58.529 36.000 0.00 0.00 40.63 2.83
5061 5730 6.592994 TGAGCAATACAGAGAAGACTGATTTG 59.407 38.462 0.00 0.00 40.63 2.32
5062 5731 6.705302 TGAGCAATACAGAGAAGACTGATTT 58.295 36.000 0.00 0.00 40.63 2.17
5063 5732 6.291648 TGAGCAATACAGAGAAGACTGATT 57.708 37.500 0.00 0.00 40.63 2.57
5064 5733 5.681954 GCTGAGCAATACAGAGAAGACTGAT 60.682 44.000 0.00 0.00 40.63 2.90
5065 5734 4.381398 GCTGAGCAATACAGAGAAGACTGA 60.381 45.833 0.00 0.00 40.63 3.41
5066 5735 3.864583 GCTGAGCAATACAGAGAAGACTG 59.135 47.826 0.00 0.00 42.78 3.51
5067 5736 3.768757 AGCTGAGCAATACAGAGAAGACT 59.231 43.478 7.39 0.00 37.54 3.24
5068 5737 3.864583 CAGCTGAGCAATACAGAGAAGAC 59.135 47.826 8.42 0.00 37.54 3.01
5069 5738 3.766051 TCAGCTGAGCAATACAGAGAAGA 59.234 43.478 13.74 0.00 37.54 2.87
5070 5739 4.120792 TCAGCTGAGCAATACAGAGAAG 57.879 45.455 13.74 0.00 37.54 2.85
5071 5740 4.248859 GTTCAGCTGAGCAATACAGAGAA 58.751 43.478 23.94 0.00 37.54 2.87
5072 5741 3.259123 TGTTCAGCTGAGCAATACAGAGA 59.741 43.478 28.39 4.16 37.54 3.10
5073 5742 3.593096 TGTTCAGCTGAGCAATACAGAG 58.407 45.455 28.39 0.00 37.54 3.35
5074 5743 3.683365 TGTTCAGCTGAGCAATACAGA 57.317 42.857 28.39 5.63 37.54 3.41
5075 5744 6.703165 TGTATATGTTCAGCTGAGCAATACAG 59.297 38.462 33.38 8.51 38.71 2.74
5076 5745 6.581712 TGTATATGTTCAGCTGAGCAATACA 58.418 36.000 33.38 33.38 38.71 2.29
5077 5746 7.307632 CCTTGTATATGTTCAGCTGAGCAATAC 60.308 40.741 32.78 31.68 38.71 1.89
5078 5747 6.707608 CCTTGTATATGTTCAGCTGAGCAATA 59.292 38.462 32.78 25.46 38.71 1.90
5079 5748 5.530171 CCTTGTATATGTTCAGCTGAGCAAT 59.470 40.000 32.78 26.29 38.71 3.56
5080 5749 4.877823 CCTTGTATATGTTCAGCTGAGCAA 59.122 41.667 32.78 22.51 38.71 3.91
5081 5750 4.162131 TCCTTGTATATGTTCAGCTGAGCA 59.838 41.667 31.59 31.59 39.53 4.26
5082 5751 4.697514 TCCTTGTATATGTTCAGCTGAGC 58.302 43.478 22.39 22.39 0.00 4.26
5083 5752 9.579768 GTATATCCTTGTATATGTTCAGCTGAG 57.420 37.037 17.43 0.75 0.00 3.35
5084 5753 9.088987 TGTATATCCTTGTATATGTTCAGCTGA 57.911 33.333 13.74 13.74 0.00 4.26
5085 5754 9.881649 ATGTATATCCTTGTATATGTTCAGCTG 57.118 33.333 7.63 7.63 0.00 4.24
5086 5755 9.881649 CATGTATATCCTTGTATATGTTCAGCT 57.118 33.333 0.00 0.00 0.00 4.24
5087 5756 9.102757 CCATGTATATCCTTGTATATGTTCAGC 57.897 37.037 0.00 0.00 0.00 4.26
5088 5757 9.605275 CCCATGTATATCCTTGTATATGTTCAG 57.395 37.037 0.00 0.00 0.00 3.02
5089 5758 8.046708 GCCCATGTATATCCTTGTATATGTTCA 58.953 37.037 0.00 0.00 0.00 3.18
5090 5759 7.499232 GGCCCATGTATATCCTTGTATATGTTC 59.501 40.741 0.00 0.00 0.00 3.18
5091 5760 7.184570 AGGCCCATGTATATCCTTGTATATGTT 59.815 37.037 0.00 0.00 0.00 2.71
5092 5761 6.678411 AGGCCCATGTATATCCTTGTATATGT 59.322 38.462 0.00 0.00 0.00 2.29
5093 5762 7.141758 AGGCCCATGTATATCCTTGTATATG 57.858 40.000 0.00 0.00 0.00 1.78
5094 5763 7.577303 CAAGGCCCATGTATATCCTTGTATAT 58.423 38.462 0.00 0.00 45.22 0.86
5095 5764 6.957631 CAAGGCCCATGTATATCCTTGTATA 58.042 40.000 0.00 0.00 45.22 1.47
5096 5765 5.819991 CAAGGCCCATGTATATCCTTGTAT 58.180 41.667 0.00 0.00 45.22 2.29
5114 5783 3.001514 TCCAGGCAGGATCAAGGC 58.998 61.111 0.00 0.00 43.07 4.35
5129 5798 7.699812 GCTTCATGTTCTCAAACTCAATAATCC 59.300 37.037 0.00 0.00 36.30 3.01
5159 5828 0.884704 GCTCAAACCCGAGAACAGCA 60.885 55.000 0.00 0.00 34.79 4.41
5160 5829 1.578206 GGCTCAAACCCGAGAACAGC 61.578 60.000 0.00 0.00 34.79 4.40
5161 5830 0.035458 AGGCTCAAACCCGAGAACAG 59.965 55.000 0.00 0.00 34.79 3.16
5169 5838 2.871453 TCTTTACCAAGGCTCAAACCC 58.129 47.619 0.00 0.00 0.00 4.11
5170 5839 3.255888 CCTTCTTTACCAAGGCTCAAACC 59.744 47.826 0.00 0.00 34.21 3.27
5185 5854 4.021719 CCATCACAAGTTGCATCCTTCTTT 60.022 41.667 1.81 0.00 0.00 2.52
5192 5861 3.921119 TGTTCCATCACAAGTTGCATC 57.079 42.857 1.81 0.00 0.00 3.91
5193 5862 6.334989 CAATATGTTCCATCACAAGTTGCAT 58.665 36.000 1.81 0.00 0.00 3.96
5197 5866 6.484288 TCTCCAATATGTTCCATCACAAGTT 58.516 36.000 0.00 0.00 0.00 2.66
5203 5872 8.365060 ACAATTTTCTCCAATATGTTCCATCA 57.635 30.769 0.00 0.00 0.00 3.07
5217 5886 3.681417 GCCAGCAATCAACAATTTTCTCC 59.319 43.478 0.00 0.00 0.00 3.71
5222 5891 3.756933 ACTGCCAGCAATCAACAATTT 57.243 38.095 0.00 0.00 0.00 1.82
5235 5905 6.295039 TCTTTAAAACGTTCTTACTGCCAG 57.705 37.500 0.00 0.00 0.00 4.85
5243 5913 4.097286 TGGCTGCTTCTTTAAAACGTTCTT 59.903 37.500 0.00 1.04 0.00 2.52
5244 5914 3.630312 TGGCTGCTTCTTTAAAACGTTCT 59.370 39.130 0.00 0.00 0.00 3.01
5252 5922 4.099266 ACATTTGTGTGGCTGCTTCTTTAA 59.901 37.500 0.00 0.00 0.00 1.52
5293 5963 5.647589 CCATTGATCCTGTGAAAATGTGAG 58.352 41.667 0.00 0.00 31.50 3.51
5299 5969 4.773674 AGATTGCCATTGATCCTGTGAAAA 59.226 37.500 0.00 0.00 0.00 2.29
5347 6025 3.443045 ATTTCCTTGCAGGGCGCG 61.443 61.111 10.65 0.00 46.97 6.86
5348 6026 2.182537 CATTTCCTTGCAGGGCGC 59.817 61.111 10.65 0.00 42.89 6.53
5349 6027 2.182537 GCATTTCCTTGCAGGGCG 59.817 61.111 10.65 0.00 42.31 6.13
5372 6050 2.028112 GCTTGACAGATGGGAGTGTGTA 60.028 50.000 0.00 0.00 0.00 2.90
5386 6064 1.238439 GCTTACCAGCAAGCTTGACA 58.762 50.000 30.39 6.23 46.04 3.58
5434 6112 3.840666 TGACAGGCACTCCTAAATTCTCT 59.159 43.478 0.00 0.00 41.93 3.10
5452 6130 4.890158 TCAGATACCAAGCTTCTTGACA 57.110 40.909 8.04 0.00 0.00 3.58
5457 6135 5.946942 TGAGATTCAGATACCAAGCTTCT 57.053 39.130 0.00 0.00 0.00 2.85
5541 6219 8.254508 AGAGATACAGATAGTTCAAGGTTCAAC 58.745 37.037 0.00 0.00 0.00 3.18
5569 6247 1.745087 ACATTCAGCCCTATTTGCACG 59.255 47.619 0.00 0.00 0.00 5.34
5570 6248 3.947834 ACTACATTCAGCCCTATTTGCAC 59.052 43.478 0.00 0.00 0.00 4.57
5572 6250 4.455606 AGACTACATTCAGCCCTATTTGC 58.544 43.478 0.00 0.00 0.00 3.68
5573 6251 6.042093 TCCTAGACTACATTCAGCCCTATTTG 59.958 42.308 0.00 0.00 0.00 2.32
5678 6363 2.451132 CTTATGTGCCTCGAGTGTACG 58.549 52.381 12.31 0.00 0.00 3.67
5716 6402 7.595819 AAGAACCTTAATTCACCACAAATCA 57.404 32.000 0.00 0.00 0.00 2.57
5761 6447 2.095567 CACAAGGAGCACACAAGTATGC 60.096 50.000 0.00 0.00 42.39 3.14
5762 6448 3.402110 TCACAAGGAGCACACAAGTATG 58.598 45.455 0.00 0.00 0.00 2.39
5763 6449 3.668447 CTCACAAGGAGCACACAAGTAT 58.332 45.455 0.00 0.00 36.69 2.12
5764 6450 3.111853 CTCACAAGGAGCACACAAGTA 57.888 47.619 0.00 0.00 36.69 2.24
5765 6451 1.959042 CTCACAAGGAGCACACAAGT 58.041 50.000 0.00 0.00 36.69 3.16
5802 6488 6.599356 TGAGCTTCTGTAGTAATAACCACA 57.401 37.500 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.