Multiple sequence alignment - TraesCS4D01G310600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G310600 chr4D 100.000 7129 0 0 1 7129 477586564 477579436 0.000000e+00 13165.0
1 TraesCS4D01G310600 chr4D 97.196 749 19 2 6382 7129 25182711 25183458 0.000000e+00 1266.0
2 TraesCS4D01G310600 chr4D 82.927 410 45 11 262 647 491395488 491395896 5.290000e-91 346.0
3 TraesCS4D01G310600 chr4D 77.684 475 80 15 4124 4594 477628775 477628323 4.240000e-67 267.0
4 TraesCS4D01G310600 chr4D 92.366 131 10 0 5789 5919 477627368 477627238 3.400000e-43 187.0
5 TraesCS4D01G310600 chr2A 95.122 1271 57 3 2054 3319 61673049 61671779 0.000000e+00 1999.0
6 TraesCS4D01G310600 chr2A 93.052 1281 66 14 2053 3319 762935218 762936489 0.000000e+00 1851.0
7 TraesCS4D01G310600 chr2A 86.582 395 42 5 265 648 204626487 204626093 6.610000e-115 425.0
8 TraesCS4D01G310600 chr4A 95.174 1264 57 2 2051 3310 21500339 21499076 0.000000e+00 1993.0
9 TraesCS4D01G310600 chr4A 88.784 1373 113 14 3422 4754 684507245 684505874 0.000000e+00 1644.0
10 TraesCS4D01G310600 chr4A 82.744 962 67 38 651 1591 684510008 684509125 0.000000e+00 765.0
11 TraesCS4D01G310600 chr4A 83.934 610 67 11 4512 5120 684506209 684505630 8.080000e-154 555.0
12 TraesCS4D01G310600 chr4A 90.349 373 17 8 1589 1957 684508938 684508581 8.370000e-129 472.0
13 TraesCS4D01G310600 chr4A 93.443 244 15 1 6 248 684511657 684511414 1.890000e-95 361.0
14 TraesCS4D01G310600 chr4A 92.213 244 17 2 5952 6193 684504497 684504254 1.900000e-90 344.0
15 TraesCS4D01G310600 chr4A 85.294 238 30 4 5717 5954 684505398 684505166 2.570000e-59 241.0
16 TraesCS4D01G310600 chr4A 92.086 139 11 0 5789 5927 684515745 684515607 5.640000e-46 196.0
17 TraesCS4D01G310600 chr4A 92.727 55 4 0 3320 3374 684507703 684507649 5.930000e-11 80.5
18 TraesCS4D01G310600 chr4A 97.674 43 1 0 3387 3429 684507656 684507614 2.760000e-09 75.0
19 TraesCS4D01G310600 chr7A 95.375 1254 54 2 2052 3301 725650952 725652205 0.000000e+00 1991.0
20 TraesCS4D01G310600 chr7A 89.920 377 32 3 5158 5532 6304188 6304560 1.390000e-131 481.0
21 TraesCS4D01G310600 chr7A 85.030 334 37 7 329 649 361631 361964 1.920000e-85 327.0
22 TraesCS4D01G310600 chr1A 94.592 1276 63 4 2051 3320 562305694 562304419 0.000000e+00 1969.0
23 TraesCS4D01G310600 chr1A 75.272 368 75 13 4106 4462 254385430 254385068 2.060000e-35 161.0
24 TraesCS4D01G310600 chr5D 94.056 1245 66 8 2054 3290 556326372 556325128 0.000000e+00 1882.0
25 TraesCS4D01G310600 chr5D 94.519 821 21 7 6323 7129 23690088 23690898 0.000000e+00 1245.0
26 TraesCS4D01G310600 chr5D 81.356 177 30 3 1344 1520 94028471 94028298 2.680000e-29 141.0
27 TraesCS4D01G310600 chr5D 86.207 116 16 0 5791 5906 449851820 449851705 7.510000e-25 126.0
28 TraesCS4D01G310600 chr6D 92.958 1278 79 9 2050 3319 424751716 424750442 0.000000e+00 1851.0
29 TraesCS4D01G310600 chr6D 96.526 950 17 4 6194 7129 427082727 427083674 0.000000e+00 1557.0
30 TraesCS4D01G310600 chr6D 96.580 614 16 3 6194 6802 17962374 17961761 0.000000e+00 1013.0
31 TraesCS4D01G310600 chr6D 89.067 375 26 3 5167 5530 319352755 319353125 1.090000e-122 451.0
32 TraesCS4D01G310600 chr3A 92.868 1276 84 3 2047 3318 593105147 593106419 0.000000e+00 1845.0
33 TraesCS4D01G310600 chr3A 92.907 1283 67 13 2052 3319 33267279 33266006 0.000000e+00 1844.0
34 TraesCS4D01G310600 chr3A 85.608 403 40 9 263 648 607224356 607224757 2.390000e-109 407.0
35 TraesCS4D01G310600 chr4B 91.051 1285 88 8 3904 5161 603169136 603167852 0.000000e+00 1711.0
36 TraesCS4D01G310600 chr4B 91.085 673 44 9 5531 6193 603167842 603167176 0.000000e+00 896.0
37 TraesCS4D01G310600 chr4B 90.909 352 19 10 841 1183 603170342 603169995 1.810000e-125 460.0
38 TraesCS4D01G310600 chr4B 92.256 297 16 2 1222 1517 603169999 603169709 1.430000e-111 414.0
39 TraesCS4D01G310600 chr4B 87.200 250 29 3 1 248 603182231 603181983 1.510000e-71 281.0
40 TraesCS4D01G310600 chr4B 86.957 253 25 5 3351 3600 603169473 603169226 1.960000e-70 278.0
41 TraesCS4D01G310600 chr4B 76.349 482 92 13 4113 4592 603188232 603187771 9.240000e-59 239.0
42 TraesCS4D01G310600 chr4B 92.617 149 10 1 5789 5937 603186901 603186754 5.600000e-51 213.0
43 TraesCS4D01G310600 chr4B 87.586 145 13 4 3970 4111 603188427 603188285 5.720000e-36 163.0
44 TraesCS4D01G310600 chr3D 96.921 942 19 5 6193 7129 26671315 26672251 0.000000e+00 1570.0
45 TraesCS4D01G310600 chr3D 97.657 811 15 2 6323 7129 30683990 30683180 0.000000e+00 1389.0
46 TraesCS4D01G310600 chr3D 91.233 365 28 3 5167 5531 567114712 567114352 1.790000e-135 494.0
47 TraesCS4D01G310600 chr2D 96.421 950 20 3 6194 7129 2934145 2933196 0.000000e+00 1554.0
48 TraesCS4D01G310600 chr2D 96.047 936 26 8 6199 7129 571777377 571776448 0.000000e+00 1513.0
49 TraesCS4D01G310600 chr2D 96.662 749 20 5 6382 7129 89884577 89883833 0.000000e+00 1240.0
50 TraesCS4D01G310600 chr2D 77.992 259 33 8 6 248 79415282 79415032 2.680000e-29 141.0
51 TraesCS4D01G310600 chr7D 95.332 964 16 5 6194 7129 3106057 3107019 0.000000e+00 1504.0
52 TraesCS4D01G310600 chr7D 96.468 906 18 7 6229 7129 549257354 549258250 0.000000e+00 1483.0
53 TraesCS4D01G310600 chr7D 94.508 965 21 14 6192 7129 25085135 25086094 0.000000e+00 1459.0
54 TraesCS4D01G310600 chr7D 96.598 823 20 5 6311 7129 106020918 106020100 0.000000e+00 1358.0
55 TraesCS4D01G310600 chr7D 96.794 811 22 2 6323 7129 638660881 638661691 0.000000e+00 1351.0
56 TraesCS4D01G310600 chr7D 96.197 710 11 5 6194 6888 629611350 629612058 0.000000e+00 1147.0
57 TraesCS4D01G310600 chr7D 91.530 366 27 2 5165 5530 106311521 106311160 1.070000e-137 501.0
58 TraesCS4D01G310600 chr7D 91.507 365 26 2 5167 5531 106023501 106023142 1.380000e-136 497.0
59 TraesCS4D01G310600 chr7D 90.212 378 33 1 5158 5535 550885120 550885493 2.310000e-134 490.0
60 TraesCS4D01G310600 chr1D 95.106 940 19 9 6193 7129 13712302 13711387 0.000000e+00 1456.0
61 TraesCS4D01G310600 chr1D 88.660 388 27 5 5158 5533 425567294 425567676 2.340000e-124 457.0
62 TraesCS4D01G310600 chr1D 75.000 368 76 13 4106 4462 200879122 200878760 9.580000e-34 156.0
63 TraesCS4D01G310600 chr6B 91.826 367 25 2 5165 5531 16452419 16452058 2.290000e-139 507.0
64 TraesCS4D01G310600 chr6B 83.805 389 44 6 267 649 537586039 537585664 1.140000e-92 351.0
65 TraesCS4D01G310600 chrUn 90.685 365 30 1 5167 5531 27572482 27572842 3.870000e-132 483.0
66 TraesCS4D01G310600 chrUn 89.920 377 31 4 5160 5535 27580574 27580944 5.000000e-131 479.0
67 TraesCS4D01G310600 chrUn 86.933 375 34 4 5167 5531 96741862 96741493 2.390000e-109 407.0
68 TraesCS4D01G310600 chrUn 86.364 374 38 5 5167 5531 96289666 96290035 5.180000e-106 396.0
69 TraesCS4D01G310600 chrUn 85.445 371 42 4 5167 5531 108695406 108695770 6.750000e-100 375.0
70 TraesCS4D01G310600 chrUn 87.164 335 30 6 5207 5532 367622386 367622716 1.130000e-97 368.0
71 TraesCS4D01G310600 chrUn 87.164 335 30 6 5207 5532 367624346 367624676 1.130000e-97 368.0
72 TraesCS4D01G310600 chrUn 83.249 394 49 10 265 648 38423496 38423882 5.290000e-91 346.0
73 TraesCS4D01G310600 chrUn 98.305 59 1 0 5474 5532 459548686 459548628 3.520000e-18 104.0
74 TraesCS4D01G310600 chrUn 90.667 75 7 0 5458 5532 419239528 419239602 4.550000e-17 100.0
75 TraesCS4D01G310600 chr5B 90.270 370 30 3 5166 5534 532566128 532565764 5.000000e-131 479.0
76 TraesCS4D01G310600 chr5B 83.744 406 51 10 258 648 315185086 315184681 3.140000e-98 370.0
77 TraesCS4D01G310600 chr5B 85.246 122 17 1 5781 5901 549674271 549674150 2.700000e-24 124.0
78 TraesCS4D01G310600 chr5A 76.774 930 153 37 3922 4816 87934136 87933235 5.040000e-126 462.0
79 TraesCS4D01G310600 chr5A 83.715 393 45 12 265 641 290406912 290407301 3.160000e-93 353.0
80 TraesCS4D01G310600 chr5A 81.461 178 28 4 1344 1520 87935025 87934852 2.680000e-29 141.0
81 TraesCS4D01G310600 chr5A 86.066 122 16 1 5781 5901 569075069 569074948 5.800000e-26 130.0
82 TraesCS4D01G310600 chr3B 84.198 405 46 9 264 653 764294821 764294420 1.880000e-100 377.0
83 TraesCS4D01G310600 chr7B 84.051 395 49 9 265 648 383873511 383873120 1.130000e-97 368.0
84 TraesCS4D01G310600 chr7B 86.174 311 32 7 349 650 22833111 22833419 6.900000e-85 326.0
85 TraesCS4D01G310600 chr1B 81.170 393 35 17 265 649 607424996 607424635 5.450000e-71 279.0
86 TraesCS4D01G310600 chr1B 75.219 343 73 11 4129 4462 288810432 288810093 1.240000e-32 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G310600 chr4D 477579436 477586564 7128 True 13165.00 13165 100.000000 1 7129 1 chr4D.!!$R1 7128
1 TraesCS4D01G310600 chr4D 25182711 25183458 747 False 1266.00 1266 97.196000 6382 7129 1 chr4D.!!$F1 747
2 TraesCS4D01G310600 chr4D 477627238 477628775 1537 True 227.00 267 85.025000 4124 5919 2 chr4D.!!$R2 1795
3 TraesCS4D01G310600 chr2A 61671779 61673049 1270 True 1999.00 1999 95.122000 2054 3319 1 chr2A.!!$R1 1265
4 TraesCS4D01G310600 chr2A 762935218 762936489 1271 False 1851.00 1851 93.052000 2053 3319 1 chr2A.!!$F1 1266
5 TraesCS4D01G310600 chr4A 21499076 21500339 1263 True 1993.00 1993 95.174000 2051 3310 1 chr4A.!!$R1 1259
6 TraesCS4D01G310600 chr4A 684504254 684515745 11491 True 473.35 1644 89.924800 6 6193 10 chr4A.!!$R2 6187
7 TraesCS4D01G310600 chr7A 725650952 725652205 1253 False 1991.00 1991 95.375000 2052 3301 1 chr7A.!!$F3 1249
8 TraesCS4D01G310600 chr1A 562304419 562305694 1275 True 1969.00 1969 94.592000 2051 3320 1 chr1A.!!$R2 1269
9 TraesCS4D01G310600 chr5D 556325128 556326372 1244 True 1882.00 1882 94.056000 2054 3290 1 chr5D.!!$R3 1236
10 TraesCS4D01G310600 chr5D 23690088 23690898 810 False 1245.00 1245 94.519000 6323 7129 1 chr5D.!!$F1 806
11 TraesCS4D01G310600 chr6D 424750442 424751716 1274 True 1851.00 1851 92.958000 2050 3319 1 chr6D.!!$R2 1269
12 TraesCS4D01G310600 chr6D 427082727 427083674 947 False 1557.00 1557 96.526000 6194 7129 1 chr6D.!!$F2 935
13 TraesCS4D01G310600 chr6D 17961761 17962374 613 True 1013.00 1013 96.580000 6194 6802 1 chr6D.!!$R1 608
14 TraesCS4D01G310600 chr3A 593105147 593106419 1272 False 1845.00 1845 92.868000 2047 3318 1 chr3A.!!$F1 1271
15 TraesCS4D01G310600 chr3A 33266006 33267279 1273 True 1844.00 1844 92.907000 2052 3319 1 chr3A.!!$R1 1267
16 TraesCS4D01G310600 chr4B 603167176 603170342 3166 True 751.80 1711 90.451600 841 6193 5 chr4B.!!$R2 5352
17 TraesCS4D01G310600 chr4B 603186754 603188427 1673 True 205.00 239 85.517333 3970 5937 3 chr4B.!!$R3 1967
18 TraesCS4D01G310600 chr3D 26671315 26672251 936 False 1570.00 1570 96.921000 6193 7129 1 chr3D.!!$F1 936
19 TraesCS4D01G310600 chr3D 30683180 30683990 810 True 1389.00 1389 97.657000 6323 7129 1 chr3D.!!$R1 806
20 TraesCS4D01G310600 chr2D 2933196 2934145 949 True 1554.00 1554 96.421000 6194 7129 1 chr2D.!!$R1 935
21 TraesCS4D01G310600 chr2D 571776448 571777377 929 True 1513.00 1513 96.047000 6199 7129 1 chr2D.!!$R4 930
22 TraesCS4D01G310600 chr2D 89883833 89884577 744 True 1240.00 1240 96.662000 6382 7129 1 chr2D.!!$R3 747
23 TraesCS4D01G310600 chr7D 3106057 3107019 962 False 1504.00 1504 95.332000 6194 7129 1 chr7D.!!$F1 935
24 TraesCS4D01G310600 chr7D 549257354 549258250 896 False 1483.00 1483 96.468000 6229 7129 1 chr7D.!!$F3 900
25 TraesCS4D01G310600 chr7D 25085135 25086094 959 False 1459.00 1459 94.508000 6192 7129 1 chr7D.!!$F2 937
26 TraesCS4D01G310600 chr7D 638660881 638661691 810 False 1351.00 1351 96.794000 6323 7129 1 chr7D.!!$F6 806
27 TraesCS4D01G310600 chr7D 629611350 629612058 708 False 1147.00 1147 96.197000 6194 6888 1 chr7D.!!$F5 694
28 TraesCS4D01G310600 chr7D 106020100 106023501 3401 True 927.50 1358 94.052500 5167 7129 2 chr7D.!!$R2 1962
29 TraesCS4D01G310600 chr1D 13711387 13712302 915 True 1456.00 1456 95.106000 6193 7129 1 chr1D.!!$R1 936
30 TraesCS4D01G310600 chrUn 367622386 367624676 2290 False 368.00 368 87.164000 5207 5532 2 chrUn.!!$F7 325
31 TraesCS4D01G310600 chr5A 87933235 87935025 1790 True 301.50 462 79.117500 1344 4816 2 chr5A.!!$R2 3472

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
977 6078 0.459063 CATACGCACAGCAGAGCAGA 60.459 55.0 0.0 0.0 0.00 4.26 F
1203 6310 0.329596 GGTCCAGCCAAGGATTCTGT 59.670 55.0 0.0 0.0 40.42 3.41 F
2807 8959 0.037303 TCCAGGGAGTAGAACGACGT 59.963 55.0 0.0 0.0 0.00 4.34 F
4684 11715 0.168348 GCAATGCTCACACTGCTCAG 59.832 55.0 0.0 0.0 0.00 3.35 F
4712 11743 0.469917 ACCCATAGATCCAACTGCCG 59.530 55.0 0.0 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2497 8649 0.808125 GTTGTTGTGTGTGTGCTCCA 59.192 50.000 0.00 0.00 0.00 3.86 R
2984 9146 1.045911 GGTCATCCTTCCTCCGCTCT 61.046 60.000 0.00 0.00 0.00 4.09 R
4697 11728 0.179045 GCACCGGCAGTTGGATCTAT 60.179 55.000 0.00 0.00 40.72 1.98 R
6048 15580 1.014564 GTCTGCCGTACACTTCCTGC 61.015 60.000 0.00 0.00 0.00 4.85 R
6222 15756 2.092323 GGACTAAAGGCCTTTGCGAAT 58.908 47.619 35.99 18.54 38.85 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 4142 3.434309 AGCATTTCCAACCAAGCTATGT 58.566 40.909 0.00 0.00 0.00 2.29
58 4143 3.194116 AGCATTTCCAACCAAGCTATGTG 59.806 43.478 0.00 0.00 0.00 3.21
75 4160 9.474313 AAGCTATGTGGTTTCTTATTATTTGGA 57.526 29.630 0.00 0.00 31.57 3.53
93 4178 4.952071 TGGAATTTTGTTGATGAGGCAA 57.048 36.364 0.00 0.00 0.00 4.52
100 4185 4.424061 TTGTTGATGAGGCAATTCTTCG 57.576 40.909 0.00 0.00 0.00 3.79
110 4195 3.691609 AGGCAATTCTTCGATTTCTCCAC 59.308 43.478 0.00 0.00 0.00 4.02
148 4233 4.233789 CCAACAATGGTGTAAACCGAATG 58.766 43.478 0.00 0.00 42.18 2.67
191 4276 4.082026 GCCCTTGTACAATTCTTGAGCAAT 60.082 41.667 9.13 0.00 31.71 3.56
193 4278 4.860907 CCTTGTACAATTCTTGAGCAATGC 59.139 41.667 9.13 0.00 31.71 3.56
211 4296 3.912496 TGCTGAGCTACATACCACAAT 57.088 42.857 5.83 0.00 0.00 2.71
244 4329 4.085733 AGTTAGCCACCAATGCATACAAA 58.914 39.130 0.00 0.00 0.00 2.83
248 4333 3.577848 AGCCACCAATGCATACAAAAGAA 59.422 39.130 0.00 0.00 0.00 2.52
250 4335 4.561326 GCCACCAATGCATACAAAAGAAGT 60.561 41.667 0.00 0.00 0.00 3.01
251 4336 5.540911 CCACCAATGCATACAAAAGAAGTT 58.459 37.500 0.00 0.00 0.00 2.66
252 4337 6.686630 CCACCAATGCATACAAAAGAAGTTA 58.313 36.000 0.00 0.00 0.00 2.24
253 4338 6.808212 CCACCAATGCATACAAAAGAAGTTAG 59.192 38.462 0.00 0.00 0.00 2.34
254 4339 6.308766 CACCAATGCATACAAAAGAAGTTAGC 59.691 38.462 0.00 0.00 0.00 3.09
255 4340 6.209391 ACCAATGCATACAAAAGAAGTTAGCT 59.791 34.615 0.00 0.00 0.00 3.32
257 4342 7.698130 CCAATGCATACAAAAGAAGTTAGCTAC 59.302 37.037 0.00 0.00 0.00 3.58
260 4345 9.613428 ATGCATACAAAAGAAGTTAGCTACATA 57.387 29.630 0.00 0.00 0.00 2.29
261 4346 9.613428 TGCATACAAAAGAAGTTAGCTACATAT 57.387 29.630 0.00 0.00 0.00 1.78
271 4356 9.900710 AGAAGTTAGCTACATATATCGAAAGTG 57.099 33.333 0.00 0.00 0.00 3.16
272 4357 8.522178 AAGTTAGCTACATATATCGAAAGTGC 57.478 34.615 0.00 0.00 0.00 4.40
273 4358 7.091443 AGTTAGCTACATATATCGAAAGTGCC 58.909 38.462 0.00 0.00 0.00 5.01
274 4359 5.730296 AGCTACATATATCGAAAGTGCCT 57.270 39.130 0.00 0.00 0.00 4.75
275 4360 6.102897 AGCTACATATATCGAAAGTGCCTT 57.897 37.500 0.00 0.00 0.00 4.35
276 4361 6.525629 AGCTACATATATCGAAAGTGCCTTT 58.474 36.000 0.00 0.46 36.29 3.11
277 4362 6.647067 AGCTACATATATCGAAAGTGCCTTTC 59.353 38.462 14.28 14.28 44.29 2.62
278 4363 6.647067 GCTACATATATCGAAAGTGCCTTTCT 59.353 38.462 19.11 9.10 45.19 2.52
279 4364 6.851222 ACATATATCGAAAGTGCCTTTCTG 57.149 37.500 19.11 13.84 45.19 3.02
280 4365 5.237344 ACATATATCGAAAGTGCCTTTCTGC 59.763 40.000 19.11 0.00 45.19 4.26
281 4366 2.191128 ATCGAAAGTGCCTTTCTGCT 57.809 45.000 19.11 7.53 45.19 4.24
282 4367 1.512926 TCGAAAGTGCCTTTCTGCTC 58.487 50.000 19.11 0.00 45.19 4.26
285 4370 0.890996 AAAGTGCCTTTCTGCTCCCG 60.891 55.000 0.00 0.00 0.00 5.14
286 4371 1.768684 AAGTGCCTTTCTGCTCCCGA 61.769 55.000 0.00 0.00 0.00 5.14
287 4372 1.743252 GTGCCTTTCTGCTCCCGAG 60.743 63.158 0.00 0.00 0.00 4.63
308 4393 2.416747 CTCAAATGAGCTCGGTGAACA 58.583 47.619 9.64 0.00 35.13 3.18
310 4395 2.146342 CAAATGAGCTCGGTGAACAGT 58.854 47.619 9.64 0.00 0.00 3.55
312 4397 3.678056 AATGAGCTCGGTGAACAGTAA 57.322 42.857 9.64 0.00 0.00 2.24
313 4398 3.678056 ATGAGCTCGGTGAACAGTAAA 57.322 42.857 9.64 0.00 0.00 2.01
314 4399 3.462483 TGAGCTCGGTGAACAGTAAAA 57.538 42.857 9.64 0.00 0.00 1.52
315 4400 4.002906 TGAGCTCGGTGAACAGTAAAAT 57.997 40.909 9.64 0.00 0.00 1.82
316 4401 3.994392 TGAGCTCGGTGAACAGTAAAATC 59.006 43.478 9.64 0.00 0.00 2.17
317 4402 4.246458 GAGCTCGGTGAACAGTAAAATCT 58.754 43.478 0.00 0.00 0.00 2.40
318 4403 4.642429 AGCTCGGTGAACAGTAAAATCTT 58.358 39.130 0.00 0.00 0.00 2.40
320 4405 5.531287 AGCTCGGTGAACAGTAAAATCTTTT 59.469 36.000 0.00 0.00 0.00 2.27
348 4433 7.622893 TTTCAAAAATCCAACTTTCTTTGGG 57.377 32.000 2.13 0.00 45.49 4.12
349 4434 6.552445 TCAAAAATCCAACTTTCTTTGGGA 57.448 33.333 2.13 0.00 45.49 4.37
350 4435 6.581712 TCAAAAATCCAACTTTCTTTGGGAG 58.418 36.000 2.13 0.00 45.49 4.30
351 4436 6.382570 TCAAAAATCCAACTTTCTTTGGGAGA 59.617 34.615 2.13 0.00 45.49 3.71
352 4437 6.806668 AAAATCCAACTTTCTTTGGGAGAA 57.193 33.333 2.13 0.00 45.49 2.87
356 4441 5.208121 TCCAACTTTCTTTGGGAGAAACAT 58.792 37.500 2.13 0.00 46.69 2.71
357 4442 5.660864 TCCAACTTTCTTTGGGAGAAACATT 59.339 36.000 2.13 0.00 46.69 2.71
358 4443 5.754890 CCAACTTTCTTTGGGAGAAACATTG 59.245 40.000 10.75 10.75 46.69 2.82
359 4444 6.406849 CCAACTTTCTTTGGGAGAAACATTGA 60.407 38.462 15.52 0.00 46.69 2.57
361 4446 7.181569 ACTTTCTTTGGGAGAAACATTGAAA 57.818 32.000 0.00 0.00 46.69 2.69
362 4447 7.619965 ACTTTCTTTGGGAGAAACATTGAAAA 58.380 30.769 0.00 0.00 46.69 2.29
363 4448 8.267183 ACTTTCTTTGGGAGAAACATTGAAAAT 58.733 29.630 0.00 0.00 46.69 1.82
364 4449 9.762933 CTTTCTTTGGGAGAAACATTGAAAATA 57.237 29.630 0.00 0.00 46.69 1.40
365 4450 9.762933 TTTCTTTGGGAGAAACATTGAAAATAG 57.237 29.630 0.00 0.00 46.69 1.73
366 4451 8.477419 TCTTTGGGAGAAACATTGAAAATAGT 57.523 30.769 0.00 0.00 0.00 2.12
368 4453 9.196552 CTTTGGGAGAAACATTGAAAATAGTTC 57.803 33.333 0.00 0.00 0.00 3.01
369 4454 7.227049 TGGGAGAAACATTGAAAATAGTTCC 57.773 36.000 0.00 0.00 0.00 3.62
370 4455 6.780031 TGGGAGAAACATTGAAAATAGTTCCA 59.220 34.615 0.00 0.00 0.00 3.53
371 4456 7.288852 TGGGAGAAACATTGAAAATAGTTCCAA 59.711 33.333 0.00 0.00 0.00 3.53
375 4460 8.992073 AGAAACATTGAAAATAGTTCCAAATGC 58.008 29.630 0.00 0.00 0.00 3.56
376 4461 8.907222 AAACATTGAAAATAGTTCCAAATGCT 57.093 26.923 0.00 0.00 0.00 3.79
379 4464 6.783892 TTGAAAATAGTTCCAAATGCTTGC 57.216 33.333 0.00 0.00 0.00 4.01
381 4466 6.286758 TGAAAATAGTTCCAAATGCTTGCAA 58.713 32.000 0.00 0.00 0.00 4.08
382 4467 6.765036 TGAAAATAGTTCCAAATGCTTGCAAA 59.235 30.769 0.00 0.00 0.00 3.68
384 4469 7.565323 AAATAGTTCCAAATGCTTGCAAAAA 57.435 28.000 0.00 0.00 0.00 1.94
385 4470 7.748691 AATAGTTCCAAATGCTTGCAAAAAT 57.251 28.000 0.00 0.00 0.00 1.82
386 4471 7.748691 ATAGTTCCAAATGCTTGCAAAAATT 57.251 28.000 0.00 0.24 0.00 1.82
388 4473 4.728917 TCCAAATGCTTGCAAAAATTCG 57.271 36.364 0.00 0.00 0.00 3.34
390 4475 4.210955 TCCAAATGCTTGCAAAAATTCGTC 59.789 37.500 0.00 0.00 0.00 4.20
393 4478 4.914312 ATGCTTGCAAAAATTCGTCATG 57.086 36.364 0.00 0.00 0.00 3.07
395 4480 3.243670 TGCTTGCAAAAATTCGTCATGGA 60.244 39.130 0.00 0.00 0.00 3.41
396 4481 3.740321 GCTTGCAAAAATTCGTCATGGAA 59.260 39.130 0.00 0.00 0.00 3.53
397 4482 4.389687 GCTTGCAAAAATTCGTCATGGAAT 59.610 37.500 0.00 0.00 38.24 3.01
398 4483 5.445010 GCTTGCAAAAATTCGTCATGGAATC 60.445 40.000 0.00 0.00 35.65 2.52
399 4484 5.131594 TGCAAAAATTCGTCATGGAATCA 57.868 34.783 0.00 0.00 35.65 2.57
401 4486 4.922692 GCAAAAATTCGTCATGGAATCACA 59.077 37.500 0.00 0.00 35.65 3.58
403 4488 6.091169 GCAAAAATTCGTCATGGAATCACATT 59.909 34.615 0.00 0.00 35.65 2.71
404 4489 7.669098 CAAAAATTCGTCATGGAATCACATTC 58.331 34.615 0.00 0.00 35.65 2.67
444 4529 3.375782 AAAAACTCAGTGCTCCAATGC 57.624 42.857 0.00 0.00 29.02 3.56
445 4530 2.283145 AAACTCAGTGCTCCAATGCT 57.717 45.000 0.00 0.00 29.02 3.79
447 4532 2.283145 ACTCAGTGCTCCAATGCTTT 57.717 45.000 0.00 0.00 29.02 3.51
448 4533 2.590821 ACTCAGTGCTCCAATGCTTTT 58.409 42.857 0.00 0.00 29.02 2.27
449 4534 2.295349 ACTCAGTGCTCCAATGCTTTTG 59.705 45.455 0.00 0.00 29.02 2.44
450 4535 2.555325 CTCAGTGCTCCAATGCTTTTGA 59.445 45.455 2.06 0.00 29.02 2.69
452 4537 3.384146 TCAGTGCTCCAATGCTTTTGAAA 59.616 39.130 2.06 0.00 29.02 2.69
453 4538 3.739300 CAGTGCTCCAATGCTTTTGAAAG 59.261 43.478 0.00 0.00 39.03 2.62
454 4539 3.385755 AGTGCTCCAATGCTTTTGAAAGT 59.614 39.130 5.47 0.00 38.28 2.66
456 4541 4.919754 GTGCTCCAATGCTTTTGAAAGTAG 59.080 41.667 5.47 0.00 38.28 2.57
457 4542 3.922850 GCTCCAATGCTTTTGAAAGTAGC 59.077 43.478 5.47 0.00 38.28 3.58
467 4552 6.919662 TGCTTTTGAAAGTAGCATTTTCAGAG 59.080 34.615 0.45 11.39 43.22 3.35
468 4553 6.920210 GCTTTTGAAAGTAGCATTTTCAGAGT 59.080 34.615 5.47 0.00 43.22 3.24
472 4557 5.637810 TGAAAGTAGCATTTTCAGAGTACCG 59.362 40.000 6.29 0.00 39.05 4.02
478 4563 6.575162 AGCATTTTCAGAGTACCGATTTTT 57.425 33.333 0.00 0.00 0.00 1.94
497 4582 4.789012 TTTTTGCCATGCCTTCTAAGAG 57.211 40.909 0.00 0.00 0.00 2.85
498 4583 3.439857 TTTGCCATGCCTTCTAAGAGT 57.560 42.857 0.00 0.00 0.00 3.24
499 4584 2.408271 TGCCATGCCTTCTAAGAGTG 57.592 50.000 0.00 0.00 0.00 3.51
500 4585 1.630369 TGCCATGCCTTCTAAGAGTGT 59.370 47.619 0.00 0.00 0.00 3.55
501 4586 2.012673 GCCATGCCTTCTAAGAGTGTG 58.987 52.381 0.00 0.00 0.00 3.82
502 4587 2.355108 GCCATGCCTTCTAAGAGTGTGA 60.355 50.000 0.00 0.00 0.00 3.58
504 4589 4.521146 CCATGCCTTCTAAGAGTGTGATT 58.479 43.478 0.00 0.00 0.00 2.57
506 4591 5.065731 CCATGCCTTCTAAGAGTGTGATTTC 59.934 44.000 0.00 0.00 0.00 2.17
507 4592 5.227569 TGCCTTCTAAGAGTGTGATTTCA 57.772 39.130 0.00 0.00 0.00 2.69
509 4594 5.645067 TGCCTTCTAAGAGTGTGATTTCATG 59.355 40.000 0.00 0.00 0.00 3.07
510 4595 5.877012 GCCTTCTAAGAGTGTGATTTCATGA 59.123 40.000 0.00 0.00 0.00 3.07
511 4596 6.183360 GCCTTCTAAGAGTGTGATTTCATGAC 60.183 42.308 0.00 0.00 0.00 3.06
512 4597 6.035435 CCTTCTAAGAGTGTGATTTCATGACG 59.965 42.308 0.00 0.00 0.00 4.35
513 4598 6.267496 TCTAAGAGTGTGATTTCATGACGA 57.733 37.500 0.00 0.00 0.00 4.20
514 4599 6.687604 TCTAAGAGTGTGATTTCATGACGAA 58.312 36.000 0.00 0.00 0.00 3.85
526 4611 4.844998 TCATGACGAAATTTTGAAGGCA 57.155 36.364 12.54 3.91 0.00 4.75
527 4612 4.545610 TCATGACGAAATTTTGAAGGCAC 58.454 39.130 12.54 0.00 0.00 5.01
528 4613 6.682611 TTTCATGACGAAATTTTGAAGGCACT 60.683 34.615 12.54 0.00 38.67 4.40
548 4633 9.830975 AGGCACTTAAAACTTTTGTCAATATTT 57.169 25.926 0.00 0.00 27.25 1.40
556 4641 9.898152 AAAACTTTTGTCAATATTTCTCCCAAA 57.102 25.926 0.00 0.00 0.00 3.28
557 4642 9.898152 AAACTTTTGTCAATATTTCTCCCAAAA 57.102 25.926 0.00 0.00 0.00 2.44
558 4643 9.898152 AACTTTTGTCAATATTTCTCCCAAAAA 57.102 25.926 0.00 0.00 32.07 1.94
559 4644 9.546428 ACTTTTGTCAATATTTCTCCCAAAAAG 57.454 29.630 0.00 0.00 32.07 2.27
562 4647 8.477419 TTGTCAATATTTCTCCCAAAAAGACT 57.523 30.769 0.00 0.00 0.00 3.24
563 4648 7.885297 TGTCAATATTTCTCCCAAAAAGACTG 58.115 34.615 0.00 0.00 0.00 3.51
566 4651 9.312904 TCAATATTTCTCCCAAAAAGACTGAAT 57.687 29.630 0.00 0.00 0.00 2.57
567 4652 9.933723 CAATATTTCTCCCAAAAAGACTGAATT 57.066 29.630 0.00 0.00 0.00 2.17
607 4692 9.574458 TCGATTTTGTTTTGATTTTACTGTTCA 57.426 25.926 0.00 0.00 0.00 3.18
609 4694 9.914923 GATTTTGTTTTGATTTTACTGTTCACC 57.085 29.630 0.00 0.00 0.00 4.02
610 4695 7.835634 TTTGTTTTGATTTTACTGTTCACCC 57.164 32.000 0.00 0.00 0.00 4.61
611 4696 5.583495 TGTTTTGATTTTACTGTTCACCCG 58.417 37.500 0.00 0.00 0.00 5.28
612 4697 5.357314 TGTTTTGATTTTACTGTTCACCCGA 59.643 36.000 0.00 0.00 0.00 5.14
613 4698 5.682943 TTTGATTTTACTGTTCACCCGAG 57.317 39.130 0.00 0.00 0.00 4.63
614 4699 4.610605 TGATTTTACTGTTCACCCGAGA 57.389 40.909 0.00 0.00 0.00 4.04
615 4700 4.963373 TGATTTTACTGTTCACCCGAGAA 58.037 39.130 0.00 0.00 0.00 2.87
616 4701 4.753107 TGATTTTACTGTTCACCCGAGAAC 59.247 41.667 7.97 7.97 46.22 3.01
624 4709 3.885358 GTTCACCCGAGAACATTTGAAC 58.115 45.455 9.49 0.00 45.53 3.18
625 4710 3.485463 TCACCCGAGAACATTTGAACT 57.515 42.857 0.00 0.00 0.00 3.01
626 4711 3.399330 TCACCCGAGAACATTTGAACTC 58.601 45.455 0.00 0.00 0.00 3.01
627 4712 7.520856 GTTCACCCGAGAACATTTGAACTCG 62.521 48.000 17.02 17.02 45.53 4.18
630 4715 2.683968 CGAGAACATTTGAACTCGGGA 58.316 47.619 16.55 0.00 45.22 5.14
631 4716 2.668457 CGAGAACATTTGAACTCGGGAG 59.332 50.000 16.55 0.00 45.22 4.30
632 4717 2.416893 GAGAACATTTGAACTCGGGAGC 59.583 50.000 0.00 0.00 0.00 4.70
633 4718 2.151202 GAACATTTGAACTCGGGAGCA 58.849 47.619 0.00 0.00 0.00 4.26
636 4721 2.224523 ACATTTGAACTCGGGAGCAGAA 60.225 45.455 0.00 0.00 0.00 3.02
637 4722 2.631160 TTTGAACTCGGGAGCAGAAA 57.369 45.000 0.00 0.00 0.00 2.52
638 4723 1.878953 TTGAACTCGGGAGCAGAAAC 58.121 50.000 0.00 0.00 0.00 2.78
639 4724 1.048601 TGAACTCGGGAGCAGAAACT 58.951 50.000 0.00 0.00 0.00 2.66
640 4725 1.000955 TGAACTCGGGAGCAGAAACTC 59.999 52.381 0.00 0.00 35.86 3.01
641 4726 1.273886 GAACTCGGGAGCAGAAACTCT 59.726 52.381 0.00 0.00 36.87 3.24
642 4727 0.605589 ACTCGGGAGCAGAAACTCTG 59.394 55.000 0.00 0.00 46.90 3.35
662 5750 6.768861 ACTCTGCGTCCTATATATATCACCTC 59.231 42.308 0.00 0.00 0.00 3.85
663 5751 6.062749 TCTGCGTCCTATATATATCACCTCC 58.937 44.000 0.00 0.00 0.00 4.30
665 5753 6.432581 TGCGTCCTATATATATCACCTCCTT 58.567 40.000 0.00 0.00 0.00 3.36
704 5792 1.003866 GTGCTGGTGAAAGAACGACAC 60.004 52.381 0.00 0.00 0.00 3.67
715 5803 7.399523 GTGAAAGAACGACACCATTGTATATC 58.600 38.462 0.00 0.00 35.47 1.63
717 5805 4.617959 AGAACGACACCATTGTATATCGG 58.382 43.478 0.00 0.00 35.47 4.18
718 5806 4.098960 AGAACGACACCATTGTATATCGGT 59.901 41.667 0.00 0.00 35.47 4.69
719 5807 3.973657 ACGACACCATTGTATATCGGTC 58.026 45.455 0.00 0.00 35.47 4.79
720 5808 3.382227 ACGACACCATTGTATATCGGTCA 59.618 43.478 0.00 0.00 35.47 4.02
721 5809 4.038763 ACGACACCATTGTATATCGGTCAT 59.961 41.667 0.00 0.00 35.47 3.06
722 5810 4.385748 CGACACCATTGTATATCGGTCATG 59.614 45.833 0.00 0.00 35.47 3.07
723 5811 5.290493 ACACCATTGTATATCGGTCATGT 57.710 39.130 0.00 0.00 32.60 3.21
724 5812 6.413783 ACACCATTGTATATCGGTCATGTA 57.586 37.500 0.00 0.00 32.60 2.29
725 5813 7.004555 ACACCATTGTATATCGGTCATGTAT 57.995 36.000 0.00 0.00 32.60 2.29
726 5814 7.450074 ACACCATTGTATATCGGTCATGTATT 58.550 34.615 0.00 0.00 32.60 1.89
727 5815 7.387673 ACACCATTGTATATCGGTCATGTATTG 59.612 37.037 0.00 0.00 32.60 1.90
728 5816 6.371548 ACCATTGTATATCGGTCATGTATTGC 59.628 38.462 0.00 0.00 0.00 3.56
729 5817 6.371271 CCATTGTATATCGGTCATGTATTGCA 59.629 38.462 0.00 0.00 0.00 4.08
730 5818 7.413328 CCATTGTATATCGGTCATGTATTGCAG 60.413 40.741 0.00 0.00 0.00 4.41
731 5819 4.929211 TGTATATCGGTCATGTATTGCAGC 59.071 41.667 0.00 0.00 0.00 5.25
759 5847 3.272574 TGCCCAATTTTGTTTTGAGCA 57.727 38.095 0.00 0.00 35.76 4.26
787 5876 6.601741 AAACAAAAATATGTGTTGCAGGTG 57.398 33.333 0.00 0.00 37.99 4.00
788 5877 5.275067 ACAAAAATATGTGTTGCAGGTGT 57.725 34.783 0.00 0.00 30.82 4.16
789 5878 5.669477 ACAAAAATATGTGTTGCAGGTGTT 58.331 33.333 0.00 0.00 30.82 3.32
790 5879 6.112058 ACAAAAATATGTGTTGCAGGTGTTT 58.888 32.000 0.00 0.00 30.82 2.83
791 5880 6.597280 ACAAAAATATGTGTTGCAGGTGTTTT 59.403 30.769 0.00 0.00 30.82 2.43
792 5881 7.120432 ACAAAAATATGTGTTGCAGGTGTTTTT 59.880 29.630 0.00 0.00 30.82 1.94
848 5937 8.752766 TTTAGTAACGAGAAATTGTACTGGAG 57.247 34.615 0.00 0.00 0.00 3.86
873 5962 1.455383 GATAACCGGGCTGGGCAATG 61.455 60.000 18.49 0.00 44.64 2.82
874 5963 2.223464 ATAACCGGGCTGGGCAATGT 62.223 55.000 18.49 0.00 44.64 2.71
916 6005 0.785979 TCGCTTTTACGAAACGGCTC 59.214 50.000 0.00 0.00 39.54 4.70
917 6006 0.515717 CGCTTTTACGAAACGGCTCG 60.516 55.000 6.84 6.84 44.50 5.03
976 6077 1.426816 CCATACGCACAGCAGAGCAG 61.427 60.000 0.00 0.00 0.00 4.24
977 6078 0.459063 CATACGCACAGCAGAGCAGA 60.459 55.000 0.00 0.00 0.00 4.26
979 6080 2.218037 TACGCACAGCAGAGCAGAGG 62.218 60.000 0.00 0.00 0.00 3.69
980 6081 2.346739 GCACAGCAGAGCAGAGGT 59.653 61.111 0.00 0.00 0.00 3.85
1153 6260 1.134371 GGATACTGTGGCCTCCTTCAC 60.134 57.143 3.32 0.00 34.71 3.18
1203 6310 0.329596 GGTCCAGCCAAGGATTCTGT 59.670 55.000 0.00 0.00 40.42 3.41
1214 6321 1.602237 GATTCTGTGGGCGGAAGGA 59.398 57.895 0.00 0.00 42.60 3.36
1215 6322 0.744771 GATTCTGTGGGCGGAAGGAC 60.745 60.000 0.00 0.00 42.60 3.85
1216 6323 2.521958 ATTCTGTGGGCGGAAGGACG 62.522 60.000 0.00 0.00 42.60 4.79
1272 6399 0.856982 GATGAGGAGGAGGAGGAGGA 59.143 60.000 0.00 0.00 0.00 3.71
1273 6400 0.859760 ATGAGGAGGAGGAGGAGGAG 59.140 60.000 0.00 0.00 0.00 3.69
1274 6401 1.292941 TGAGGAGGAGGAGGAGGAGG 61.293 65.000 0.00 0.00 0.00 4.30
1275 6402 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1276 6403 1.231928 GGAGGAGGAGGAGGAGGAC 59.768 68.421 0.00 0.00 0.00 3.85
1277 6404 1.152839 GAGGAGGAGGAGGAGGACG 60.153 68.421 0.00 0.00 0.00 4.79
1278 6405 2.123640 GGAGGAGGAGGAGGACGG 60.124 72.222 0.00 0.00 0.00 4.79
1279 6406 2.691779 GGAGGAGGAGGAGGACGGA 61.692 68.421 0.00 0.00 0.00 4.69
1280 6407 1.539665 GAGGAGGAGGAGGACGGAT 59.460 63.158 0.00 0.00 0.00 4.18
1281 6408 0.538746 GAGGAGGAGGAGGACGGATC 60.539 65.000 0.00 0.00 0.00 3.36
1282 6409 0.996762 AGGAGGAGGAGGACGGATCT 60.997 60.000 0.00 0.00 0.00 2.75
1283 6410 0.538746 GGAGGAGGAGGACGGATCTC 60.539 65.000 0.00 0.00 0.00 2.75
1287 6414 2.524640 GGAGGACGGATCTCCCCC 60.525 72.222 9.05 0.00 43.71 5.40
1318 6445 1.082169 GCTGCGTTTTGACGATGCA 60.082 52.632 2.79 0.00 37.46 3.96
1326 6453 1.089112 TTTGACGATGCAGCTGATGG 58.911 50.000 20.43 11.71 0.00 3.51
1424 6551 2.920912 TTCTGGACGGCGACCCTT 60.921 61.111 24.58 0.00 0.00 3.95
1428 6555 2.588034 GGACGGCGACCCTTATGC 60.588 66.667 16.62 0.00 0.00 3.14
1520 6671 2.685388 GCAGAGAAAGGCCAGGTAATTC 59.315 50.000 5.01 0.00 0.00 2.17
1531 6682 3.744214 GCCAGGTAATTCGATCCATGACA 60.744 47.826 0.00 0.00 0.00 3.58
1539 6690 2.554142 TCGATCCATGACACTGCATTC 58.446 47.619 0.00 0.00 0.00 2.67
1556 6707 3.507786 CATTCATTCTGTGTGTGCCATG 58.492 45.455 0.00 0.00 0.00 3.66
1591 6747 3.034721 TGCGAAAATTGGAGACTACGT 57.965 42.857 0.00 0.00 0.00 3.57
1592 6748 4.177165 TGCGAAAATTGGAGACTACGTA 57.823 40.909 0.00 0.00 0.00 3.57
1593 6749 4.751060 TGCGAAAATTGGAGACTACGTAT 58.249 39.130 0.00 0.00 0.00 3.06
1622 6967 2.914695 ATGTTTTTGCACTGTGCCAT 57.085 40.000 28.17 20.07 44.23 4.40
1642 6987 4.686091 CCATAGACTACGTAACGTATCGGA 59.314 45.833 14.77 7.06 41.53 4.55
1646 6991 2.609459 ACTACGTAACGTATCGGACCTG 59.391 50.000 14.77 0.55 41.53 4.00
1648 6993 2.292267 ACGTAACGTATCGGACCTGAT 58.708 47.619 14.77 4.60 38.73 2.90
1649 6994 2.289002 ACGTAACGTATCGGACCTGATC 59.711 50.000 14.77 0.00 38.73 2.92
1650 6995 2.547211 CGTAACGTATCGGACCTGATCT 59.453 50.000 0.00 0.00 0.00 2.75
1666 7013 3.477530 TGATCTGATCGGACATCTACGT 58.522 45.455 6.33 0.00 0.00 3.57
1763 7112 2.490115 TGTGTTCATTTAATGTCGCCCC 59.510 45.455 4.77 0.00 0.00 5.80
1764 7113 2.096248 TGTTCATTTAATGTCGCCCCC 58.904 47.619 4.77 0.00 0.00 5.40
1769 7118 3.578716 TCATTTAATGTCGCCCCCAAAAA 59.421 39.130 4.77 0.00 0.00 1.94
1832 7181 0.383231 GCCTTGCAGATTTCCGGATG 59.617 55.000 4.15 0.53 0.00 3.51
1836 7185 2.620251 TGCAGATTTCCGGATGTAGG 57.380 50.000 4.15 0.00 0.00 3.18
1872 7221 5.546499 TGACAGGTAAACAAGGGATTAGTCT 59.454 40.000 0.00 0.00 0.00 3.24
1873 7222 5.805728 ACAGGTAAACAAGGGATTAGTCTG 58.194 41.667 0.00 0.00 0.00 3.51
1874 7223 4.636206 CAGGTAAACAAGGGATTAGTCTGC 59.364 45.833 0.00 0.00 0.00 4.26
1875 7224 4.288626 AGGTAAACAAGGGATTAGTCTGCA 59.711 41.667 0.00 0.00 0.00 4.41
1876 7225 4.636206 GGTAAACAAGGGATTAGTCTGCAG 59.364 45.833 7.63 7.63 0.00 4.41
1877 7226 4.640771 AAACAAGGGATTAGTCTGCAGA 57.359 40.909 13.74 13.74 0.00 4.26
1878 7227 4.640771 AACAAGGGATTAGTCTGCAGAA 57.359 40.909 20.19 2.92 0.00 3.02
1879 7228 4.640771 ACAAGGGATTAGTCTGCAGAAA 57.359 40.909 20.19 10.94 0.00 2.52
1880 7229 4.985538 ACAAGGGATTAGTCTGCAGAAAA 58.014 39.130 20.19 16.18 0.00 2.29
1881 7230 5.574188 ACAAGGGATTAGTCTGCAGAAAAT 58.426 37.500 20.19 20.16 0.00 1.82
1882 7231 6.012745 ACAAGGGATTAGTCTGCAGAAAATT 58.987 36.000 20.19 7.24 0.00 1.82
1883 7232 6.071728 ACAAGGGATTAGTCTGCAGAAAATTG 60.072 38.462 20.19 17.15 0.00 2.32
1884 7233 4.400567 AGGGATTAGTCTGCAGAAAATTGC 59.599 41.667 20.19 10.63 44.33 3.56
1938 7287 1.460504 GGTAAAAGCTGTACCAGGCC 58.539 55.000 18.00 0.00 40.73 5.19
1971 8059 5.606348 TTTCTTCTCATCTAAGCCCTCTC 57.394 43.478 0.00 0.00 0.00 3.20
2001 8089 3.230134 TCCTTCACACATTTTCCCAAGG 58.770 45.455 0.00 0.00 0.00 3.61
2031 8178 4.321156 GCCTGCAGTGTCATTCATTTGTTA 60.321 41.667 13.81 0.00 0.00 2.41
2035 8182 8.028354 CCTGCAGTGTCATTCATTTGTTATTTA 58.972 33.333 13.81 0.00 0.00 1.40
2193 8342 2.814280 ACAGCTTACAACGCTACACT 57.186 45.000 0.00 0.00 35.63 3.55
2316 8467 0.807667 CACCGGCAGAGGAATCGAAG 60.808 60.000 0.00 0.00 34.73 3.79
2497 8649 4.456806 GGAGCACGACCACAAGTT 57.543 55.556 0.00 0.00 0.00 2.66
2515 8667 1.201181 GTTGGAGCACACACACAACAA 59.799 47.619 0.00 0.00 40.66 2.83
2665 8817 2.101640 ACCCCAAAGCACCAATCTTT 57.898 45.000 0.00 0.00 34.37 2.52
2696 8848 2.351777 CTCCAAGGAGGACACGACA 58.648 57.895 8.28 0.00 43.07 4.35
2759 8911 2.043046 CCCGGGAACATTGGCCAT 60.043 61.111 18.48 0.00 0.00 4.40
2807 8959 0.037303 TCCAGGGAGTAGAACGACGT 59.963 55.000 0.00 0.00 0.00 4.34
2854 9008 2.364324 GGAAAAGACCAAACAGGGGTTC 59.636 50.000 0.00 0.00 43.89 3.62
3166 9329 1.098712 CGAGAGAGAAGGGACGGAGG 61.099 65.000 0.00 0.00 0.00 4.30
3374 9541 8.257306 GCTATTTTGTTTCCCTCCATTTTGATA 58.743 33.333 0.00 0.00 0.00 2.15
3396 9563 8.579006 TGATATGTAGAATTGCATTTTGATCCC 58.421 33.333 0.00 0.00 31.70 3.85
3586 10171 5.091431 GCTGCAGAACACAACTTATGATTC 58.909 41.667 20.43 0.00 0.00 2.52
3616 10210 9.754382 ATAATGTGAAAGATGCATTATTCAACC 57.246 29.630 22.22 14.79 40.69 3.77
3731 10464 2.029838 ATTTGTCTTAGAGCAGGCCG 57.970 50.000 0.00 0.00 0.00 6.13
3744 10477 1.202348 GCAGGCCGCTAAGTTTTTCAT 59.798 47.619 11.61 0.00 37.77 2.57
3797 10530 6.216801 GGTCACTACCGATGCCATTATATA 57.783 41.667 0.00 0.00 35.62 0.86
3802 10535 9.733556 TCACTACCGATGCCATTATATATTTTT 57.266 29.630 0.00 0.00 0.00 1.94
3896 10631 7.900782 ATTGTTACATAGACGCCCATTATAC 57.099 36.000 0.00 0.00 0.00 1.47
4044 10895 4.222847 CCCTTCGGCGCTACCTCC 62.223 72.222 7.64 0.00 35.61 4.30
4073 10928 1.806542 GCACTGTACCATGGTGAGTTG 59.193 52.381 28.17 18.63 33.32 3.16
4275 11192 1.774110 TTCAAGTGCAAAGGGCTTCA 58.226 45.000 0.00 0.00 45.15 3.02
4336 11253 1.453015 GGTGCACCCAACAGTGACA 60.453 57.895 26.31 0.00 40.34 3.58
4406 11323 3.127895 TGTTGTGAACCGAAACCAAGAAG 59.872 43.478 0.00 0.00 0.00 2.85
4426 11343 4.640789 AGGTCATACTTCAGTTAGAGCG 57.359 45.455 0.00 0.00 35.08 5.03
4439 11356 2.579207 TAGAGCGCCACTGAATGTAC 57.421 50.000 2.29 0.00 0.00 2.90
4443 11360 1.709760 CGCCACTGAATGTACAGCG 59.290 57.895 8.68 8.68 41.06 5.18
4519 11454 2.617774 GGTTACTCACCTAGTAGAGCCG 59.382 54.545 0.00 0.00 43.29 5.52
4551 11486 4.299796 AAGGCCACACCCCGCAAT 62.300 61.111 5.01 0.00 40.58 3.56
4559 11494 0.328258 ACACCCCGCAATAAGAGCTT 59.672 50.000 0.00 0.00 0.00 3.74
4599 11630 1.000506 TCACACCGCTCAAGTAACTCC 59.999 52.381 0.00 0.00 0.00 3.85
4620 11651 3.245264 CCCCCTTTAGAACCAACAGTCAT 60.245 47.826 0.00 0.00 0.00 3.06
4684 11715 0.168348 GCAATGCTCACACTGCTCAG 59.832 55.000 0.00 0.00 0.00 3.35
4696 11727 1.277557 ACTGCTCAGATCACTCAACCC 59.722 52.381 3.60 0.00 0.00 4.11
4697 11728 1.277273 CTGCTCAGATCACTCAACCCA 59.723 52.381 0.00 0.00 0.00 4.51
4710 11741 3.209410 CTCAACCCATAGATCCAACTGC 58.791 50.000 0.00 0.00 0.00 4.40
4712 11743 0.469917 ACCCATAGATCCAACTGCCG 59.530 55.000 0.00 0.00 0.00 5.69
4734 11765 0.746659 GCACCAAGAGCAAACCTTGT 59.253 50.000 0.00 0.00 39.36 3.16
4737 11768 2.624838 CACCAAGAGCAAACCTTGTGAT 59.375 45.455 0.00 0.00 39.36 3.06
4757 11788 5.461737 GTGATAAGAGCTGCAAGAGATACAC 59.538 44.000 1.02 0.00 34.07 2.90
4758 11789 3.969287 AAGAGCTGCAAGAGATACACA 57.031 42.857 1.02 0.00 34.07 3.72
4782 11906 8.567948 ACACAATGGTTACACTTCTCAAATTAG 58.432 33.333 0.00 0.00 0.00 1.73
4788 11912 6.128634 GGTTACACTTCTCAAATTAGTCACCG 60.129 42.308 0.00 0.00 0.00 4.94
4811 11935 1.242076 GGAGCAAACTGTCAGTGCAT 58.758 50.000 15.57 3.58 40.83 3.96
4968 12092 3.366396 ACATGACAGAGGAGGAATACGT 58.634 45.455 0.00 0.00 0.00 3.57
5080 12204 1.470890 CTGTCCTCGAAGGTGAGACTC 59.529 57.143 0.00 0.00 38.28 3.36
5112 12237 3.690475 TTGCCATATCTGCTCATCGAT 57.310 42.857 0.00 0.00 0.00 3.59
5149 12289 1.009675 GCACGAATGGGCTTATGCG 60.010 57.895 0.00 1.93 40.82 4.73
5164 12304 1.097232 ATGCGCAATTGAAGCTGCTA 58.903 45.000 17.11 7.07 36.38 3.49
5189 12329 5.640732 CAAGGTTTTGGTTATCGAATGAGG 58.359 41.667 0.00 0.00 0.00 3.86
5198 12338 7.581213 TGGTTATCGAATGAGGCAATTTTAT 57.419 32.000 0.00 0.00 0.00 1.40
5200 12340 6.797033 GGTTATCGAATGAGGCAATTTTATCG 59.203 38.462 0.00 0.00 0.00 2.92
5253 12393 8.672823 GGTTACCAAGAAATACCGAGAATATT 57.327 34.615 0.00 0.00 0.00 1.28
5375 12515 3.714391 ACACGTTAGAACCAACTCTCAC 58.286 45.455 0.00 0.00 0.00 3.51
5472 12621 3.004090 GGATTTACCCAGGGGCGT 58.996 61.111 11.37 0.00 39.32 5.68
5588 12742 6.711277 TGCAAAATATGTCTAGGTTGAGTCT 58.289 36.000 0.00 0.00 0.00 3.24
5622 14159 7.800380 CGGATTGATCACTACTCATTAAATTGC 59.200 37.037 0.00 0.00 0.00 3.56
5673 14211 0.652465 GTGTCGTTTGTTTCGTCGGC 60.652 55.000 0.00 0.00 0.00 5.54
5939 14799 9.638239 TTGATGAGGCTTGTTTATTTGTATTTC 57.362 29.630 0.00 0.00 0.00 2.17
6048 15580 1.479323 CTGATTGGCCTTCAATGTGGG 59.521 52.381 3.32 0.00 45.36 4.61
6103 15635 4.277593 CAGCTCCTAGAGGCGCCG 62.278 72.222 23.20 6.32 46.59 6.46
6131 15664 2.534298 CGACAAGAGTCATACCAGCAG 58.466 52.381 0.00 0.00 45.23 4.24
6136 15669 2.114616 AGAGTCATACCAGCAGGAAGG 58.885 52.381 0.35 0.00 38.69 3.46
6146 15679 0.029267 AGCAGGAAGGGGATGAGGAT 60.029 55.000 0.00 0.00 0.00 3.24
6151 15684 4.323868 GCAGGAAGGGGATGAGGATTATAC 60.324 50.000 0.00 0.00 0.00 1.47
6222 15756 2.963599 AAAAAGGCCTTTAGTCCCGA 57.036 45.000 30.59 0.00 31.63 5.14
6669 16220 8.211629 TCTATTAACCCTCAGGAATTTAGCTTC 58.788 37.037 0.00 0.00 36.73 3.86
6700 17842 5.484173 GTGACACATTTCACTGTTTGAGA 57.516 39.130 0.00 0.00 42.36 3.27
6774 17950 6.408035 TCGGCAATAATTAGTTTGACCACTA 58.592 36.000 3.48 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.929169 CGACGATGATGCATCAACTGT 59.071 47.619 31.79 27.04 40.54 3.55
5 6 1.289276 CACCGACGATGATGCATCAA 58.711 50.000 31.79 16.26 40.54 2.57
7 8 0.855349 GACACCGACGATGATGCATC 59.145 55.000 20.14 20.14 37.50 3.91
49 4134 9.474313 TCCAAATAATAAGAAACCACATAGCTT 57.526 29.630 0.00 0.00 0.00 3.74
66 4151 8.102047 TGCCTCATCAACAAAATTCCAAATAAT 58.898 29.630 0.00 0.00 0.00 1.28
67 4152 7.448420 TGCCTCATCAACAAAATTCCAAATAA 58.552 30.769 0.00 0.00 0.00 1.40
75 4160 6.366877 CGAAGAATTGCCTCATCAACAAAATT 59.633 34.615 0.00 0.00 0.00 1.82
93 4178 4.201851 CGCAATGTGGAGAAATCGAAGAAT 60.202 41.667 0.00 0.00 43.58 2.40
100 4185 2.749621 ACCTTCGCAATGTGGAGAAATC 59.250 45.455 3.18 0.00 0.00 2.17
110 4195 0.893270 TTGGGTGGACCTTCGCAATG 60.893 55.000 12.78 0.00 41.11 2.82
148 4233 2.350102 GCAAAGCAAAGAAAGGCAATGC 60.350 45.455 0.00 0.00 36.95 3.56
191 4276 3.912496 ATTGTGGTATGTAGCTCAGCA 57.088 42.857 0.00 0.00 0.00 4.41
193 4278 5.178061 TCACAATTGTGGTATGTAGCTCAG 58.822 41.667 32.54 7.48 45.65 3.35
211 4296 4.274147 TGGTGGCTAACTTCTTTTCACAA 58.726 39.130 0.00 0.00 0.00 3.33
220 4305 3.694072 TGTATGCATTGGTGGCTAACTTC 59.306 43.478 3.54 0.00 0.00 3.01
248 4333 7.039644 AGGCACTTTCGATATATGTAGCTAACT 60.040 37.037 0.00 0.00 27.25 2.24
250 4335 7.228314 AGGCACTTTCGATATATGTAGCTAA 57.772 36.000 0.00 0.00 27.25 3.09
251 4336 6.835819 AGGCACTTTCGATATATGTAGCTA 57.164 37.500 0.00 0.00 27.25 3.32
252 4337 5.730296 AGGCACTTTCGATATATGTAGCT 57.270 39.130 0.00 0.00 27.25 3.32
269 4354 1.743252 CTCGGGAGCAGAAAGGCAC 60.743 63.158 0.00 0.00 35.83 5.01
270 4355 2.665000 CTCGGGAGCAGAAAGGCA 59.335 61.111 0.00 0.00 35.83 4.75
288 4373 2.414481 CTGTTCACCGAGCTCATTTGAG 59.586 50.000 15.40 3.13 44.75 3.02
290 4375 2.146342 ACTGTTCACCGAGCTCATTTG 58.854 47.619 15.40 7.19 0.00 2.32
291 4376 2.550830 ACTGTTCACCGAGCTCATTT 57.449 45.000 15.40 0.00 0.00 2.32
293 4378 3.678056 TTTACTGTTCACCGAGCTCAT 57.322 42.857 15.40 0.00 0.00 2.90
294 4379 3.462483 TTTTACTGTTCACCGAGCTCA 57.538 42.857 15.40 0.00 0.00 4.26
295 4380 4.246458 AGATTTTACTGTTCACCGAGCTC 58.754 43.478 2.73 2.73 0.00 4.09
297 4382 5.358298 AAAGATTTTACTGTTCACCGAGC 57.642 39.130 0.00 0.00 0.00 5.03
340 4425 8.923270 ACTATTTTCAATGTTTCTCCCAAAGAA 58.077 29.630 0.00 0.00 42.35 2.52
341 4426 8.477419 ACTATTTTCAATGTTTCTCCCAAAGA 57.523 30.769 0.00 0.00 0.00 2.52
342 4427 9.196552 GAACTATTTTCAATGTTTCTCCCAAAG 57.803 33.333 0.00 0.00 0.00 2.77
343 4428 8.147704 GGAACTATTTTCAATGTTTCTCCCAAA 58.852 33.333 0.00 0.00 0.00 3.28
344 4429 7.288852 TGGAACTATTTTCAATGTTTCTCCCAA 59.711 33.333 0.00 0.00 0.00 4.12
345 4430 6.780031 TGGAACTATTTTCAATGTTTCTCCCA 59.220 34.615 0.00 0.00 0.00 4.37
346 4431 7.227049 TGGAACTATTTTCAATGTTTCTCCC 57.773 36.000 0.00 0.00 0.00 4.30
347 4432 9.710900 ATTTGGAACTATTTTCAATGTTTCTCC 57.289 29.630 0.00 0.00 0.00 3.71
349 4434 8.992073 GCATTTGGAACTATTTTCAATGTTTCT 58.008 29.630 0.00 0.00 0.00 2.52
350 4435 8.992073 AGCATTTGGAACTATTTTCAATGTTTC 58.008 29.630 0.00 0.00 0.00 2.78
351 4436 8.907222 AGCATTTGGAACTATTTTCAATGTTT 57.093 26.923 0.00 0.00 0.00 2.83
352 4437 8.776470 CAAGCATTTGGAACTATTTTCAATGTT 58.224 29.630 0.00 0.00 0.00 2.71
356 4441 6.286758 TGCAAGCATTTGGAACTATTTTCAA 58.713 32.000 0.00 0.00 34.79 2.69
357 4442 5.851720 TGCAAGCATTTGGAACTATTTTCA 58.148 33.333 0.00 0.00 34.79 2.69
358 4443 6.783892 TTGCAAGCATTTGGAACTATTTTC 57.216 33.333 0.00 0.00 39.34 2.29
359 4444 7.565323 TTTTGCAAGCATTTGGAACTATTTT 57.435 28.000 0.00 0.00 43.15 1.82
361 4446 7.748691 ATTTTTGCAAGCATTTGGAACTATT 57.251 28.000 0.00 0.00 43.15 1.73
362 4447 7.360269 CGAATTTTTGCAAGCATTTGGAACTAT 60.360 33.333 0.00 0.00 43.15 2.12
363 4448 6.073873 CGAATTTTTGCAAGCATTTGGAACTA 60.074 34.615 0.00 0.00 43.15 2.24
364 4449 5.277442 CGAATTTTTGCAAGCATTTGGAACT 60.277 36.000 0.00 0.00 43.15 3.01
365 4450 4.905295 CGAATTTTTGCAAGCATTTGGAAC 59.095 37.500 0.00 0.00 43.15 3.62
366 4451 4.574013 ACGAATTTTTGCAAGCATTTGGAA 59.426 33.333 17.84 0.00 41.99 3.53
368 4453 4.025061 TGACGAATTTTTGCAAGCATTTGG 60.025 37.500 17.84 11.13 34.79 3.28
369 4454 5.080642 TGACGAATTTTTGCAAGCATTTG 57.919 34.783 14.29 14.29 37.36 2.32
370 4455 5.334260 CCATGACGAATTTTTGCAAGCATTT 60.334 36.000 0.00 0.00 0.00 2.32
371 4456 4.152759 CCATGACGAATTTTTGCAAGCATT 59.847 37.500 0.00 1.88 0.00 3.56
374 4459 3.316283 TCCATGACGAATTTTTGCAAGC 58.684 40.909 0.00 0.00 0.00 4.01
375 4460 5.634439 TGATTCCATGACGAATTTTTGCAAG 59.366 36.000 0.00 0.00 32.56 4.01
376 4461 5.404968 GTGATTCCATGACGAATTTTTGCAA 59.595 36.000 0.00 0.00 32.56 4.08
379 4464 7.585286 AATGTGATTCCATGACGAATTTTTG 57.415 32.000 0.00 0.00 32.56 2.44
401 4486 2.530460 TTGCCATGCCTTACAGGAAT 57.470 45.000 0.00 0.00 37.67 3.01
403 4488 2.300956 TTTTGCCATGCCTTACAGGA 57.699 45.000 0.00 0.00 37.67 3.86
424 4509 2.961062 AGCATTGGAGCACTGAGTTTTT 59.039 40.909 0.00 0.00 36.85 1.94
428 4513 2.283145 AAAGCATTGGAGCACTGAGT 57.717 45.000 0.00 0.00 36.85 3.41
429 4514 2.555325 TCAAAAGCATTGGAGCACTGAG 59.445 45.455 2.87 0.00 36.85 3.35
430 4515 2.585330 TCAAAAGCATTGGAGCACTGA 58.415 42.857 2.87 0.00 36.85 3.41
431 4516 3.374220 TTCAAAAGCATTGGAGCACTG 57.626 42.857 2.87 0.00 36.85 3.66
432 4517 3.385755 ACTTTCAAAAGCATTGGAGCACT 59.614 39.130 2.43 0.00 39.63 4.40
433 4518 3.721035 ACTTTCAAAAGCATTGGAGCAC 58.279 40.909 2.43 0.00 39.63 4.40
434 4519 4.559300 GCTACTTTCAAAAGCATTGGAGCA 60.559 41.667 2.43 0.00 39.63 4.26
435 4520 3.922850 GCTACTTTCAAAAGCATTGGAGC 59.077 43.478 2.43 0.00 39.63 4.70
436 4521 5.125100 TGCTACTTTCAAAAGCATTGGAG 57.875 39.130 2.43 4.47 41.15 3.86
443 4528 6.920210 ACTCTGAAAATGCTACTTTCAAAAGC 59.080 34.615 2.43 0.00 41.10 3.51
444 4529 9.387123 GTACTCTGAAAATGCTACTTTCAAAAG 57.613 33.333 0.97 0.97 41.10 2.27
445 4530 8.349983 GGTACTCTGAAAATGCTACTTTCAAAA 58.650 33.333 8.91 2.31 41.10 2.44
447 4532 6.147164 CGGTACTCTGAAAATGCTACTTTCAA 59.853 38.462 8.91 2.50 41.10 2.69
448 4533 5.637810 CGGTACTCTGAAAATGCTACTTTCA 59.362 40.000 7.77 7.77 39.79 2.69
449 4534 5.867716 TCGGTACTCTGAAAATGCTACTTTC 59.132 40.000 0.00 0.00 34.09 2.62
450 4535 5.790593 TCGGTACTCTGAAAATGCTACTTT 58.209 37.500 0.00 0.00 0.00 2.66
452 4537 5.599999 ATCGGTACTCTGAAAATGCTACT 57.400 39.130 0.00 0.00 32.29 2.57
453 4538 6.663944 AAATCGGTACTCTGAAAATGCTAC 57.336 37.500 0.00 0.00 32.29 3.58
454 4539 7.681939 AAAAATCGGTACTCTGAAAATGCTA 57.318 32.000 0.00 0.00 32.29 3.49
478 4563 3.084039 CACTCTTAGAAGGCATGGCAAA 58.916 45.455 22.64 8.86 0.00 3.68
481 4566 2.012673 CACACTCTTAGAAGGCATGGC 58.987 52.381 12.14 12.14 0.00 4.40
483 4568 5.645067 TGAAATCACACTCTTAGAAGGCATG 59.355 40.000 0.00 0.00 0.00 4.06
484 4569 5.809001 TGAAATCACACTCTTAGAAGGCAT 58.191 37.500 0.00 0.00 0.00 4.40
485 4570 5.227569 TGAAATCACACTCTTAGAAGGCA 57.772 39.130 0.00 0.00 0.00 4.75
486 4571 5.877012 TCATGAAATCACACTCTTAGAAGGC 59.123 40.000 0.00 0.00 0.00 4.35
487 4572 6.035435 CGTCATGAAATCACACTCTTAGAAGG 59.965 42.308 0.00 0.00 0.00 3.46
488 4573 6.808704 TCGTCATGAAATCACACTCTTAGAAG 59.191 38.462 0.00 0.00 0.00 2.85
489 4574 6.687604 TCGTCATGAAATCACACTCTTAGAA 58.312 36.000 0.00 0.00 0.00 2.10
490 4575 6.267496 TCGTCATGAAATCACACTCTTAGA 57.733 37.500 0.00 0.00 0.00 2.10
504 4589 4.981674 GTGCCTTCAAAATTTCGTCATGAA 59.018 37.500 0.00 0.00 33.85 2.57
506 4591 4.549458 AGTGCCTTCAAAATTTCGTCATG 58.451 39.130 0.00 0.00 0.00 3.07
507 4592 4.853924 AGTGCCTTCAAAATTTCGTCAT 57.146 36.364 0.00 0.00 0.00 3.06
509 4594 7.222031 AGTTTTAAGTGCCTTCAAAATTTCGTC 59.778 33.333 0.00 0.00 0.00 4.20
510 4595 7.039270 AGTTTTAAGTGCCTTCAAAATTTCGT 58.961 30.769 0.00 0.00 0.00 3.85
511 4596 7.463469 AGTTTTAAGTGCCTTCAAAATTTCG 57.537 32.000 0.00 0.00 0.00 3.46
513 4598 9.838975 CAAAAGTTTTAAGTGCCTTCAAAATTT 57.161 25.926 0.00 11.08 36.84 1.82
514 4599 9.008965 ACAAAAGTTTTAAGTGCCTTCAAAATT 57.991 25.926 0.00 3.19 30.02 1.82
515 4600 8.560355 ACAAAAGTTTTAAGTGCCTTCAAAAT 57.440 26.923 0.00 0.00 0.00 1.82
517 4602 7.155328 TGACAAAAGTTTTAAGTGCCTTCAAA 58.845 30.769 0.00 0.00 0.00 2.69
518 4603 6.692486 TGACAAAAGTTTTAAGTGCCTTCAA 58.308 32.000 0.00 0.00 0.00 2.69
521 4606 9.830975 AATATTGACAAAAGTTTTAAGTGCCTT 57.169 25.926 0.00 0.00 0.00 4.35
530 4615 9.898152 TTTGGGAGAAATATTGACAAAAGTTTT 57.102 25.926 0.00 0.00 0.00 2.43
531 4616 9.898152 TTTTGGGAGAAATATTGACAAAAGTTT 57.102 25.926 0.00 0.00 33.15 2.66
532 4617 9.898152 TTTTTGGGAGAAATATTGACAAAAGTT 57.102 25.926 0.00 0.00 37.55 2.66
533 4618 9.546428 CTTTTTGGGAGAAATATTGACAAAAGT 57.454 29.630 0.00 0.00 37.55 2.66
534 4619 9.762933 TCTTTTTGGGAGAAATATTGACAAAAG 57.237 29.630 0.00 0.00 37.55 2.27
535 4620 9.541143 GTCTTTTTGGGAGAAATATTGACAAAA 57.459 29.630 0.00 0.00 35.37 2.44
536 4621 8.923270 AGTCTTTTTGGGAGAAATATTGACAAA 58.077 29.630 0.00 0.00 0.00 2.83
537 4622 8.359642 CAGTCTTTTTGGGAGAAATATTGACAA 58.640 33.333 0.00 0.00 0.00 3.18
538 4623 7.723616 TCAGTCTTTTTGGGAGAAATATTGACA 59.276 33.333 0.00 0.00 0.00 3.58
540 4625 8.704849 TTCAGTCTTTTTGGGAGAAATATTGA 57.295 30.769 0.00 0.00 0.00 2.57
581 4666 9.574458 TGAACAGTAAAATCAAAACAAAATCGA 57.426 25.926 0.00 0.00 0.00 3.59
582 4667 9.618410 GTGAACAGTAAAATCAAAACAAAATCG 57.382 29.630 0.00 0.00 0.00 3.34
583 4668 9.914923 GGTGAACAGTAAAATCAAAACAAAATC 57.085 29.630 0.00 0.00 0.00 2.17
585 4670 7.063544 CGGGTGAACAGTAAAATCAAAACAAAA 59.936 33.333 0.00 0.00 0.00 2.44
586 4671 6.531948 CGGGTGAACAGTAAAATCAAAACAAA 59.468 34.615 0.00 0.00 0.00 2.83
587 4672 6.037098 CGGGTGAACAGTAAAATCAAAACAA 58.963 36.000 0.00 0.00 0.00 2.83
588 4673 5.357314 TCGGGTGAACAGTAAAATCAAAACA 59.643 36.000 0.00 0.00 0.00 2.83
589 4674 5.823353 TCGGGTGAACAGTAAAATCAAAAC 58.177 37.500 0.00 0.00 0.00 2.43
590 4675 5.823570 TCTCGGGTGAACAGTAAAATCAAAA 59.176 36.000 0.00 0.00 0.00 2.44
591 4676 5.369833 TCTCGGGTGAACAGTAAAATCAAA 58.630 37.500 0.00 0.00 0.00 2.69
593 4678 4.610605 TCTCGGGTGAACAGTAAAATCA 57.389 40.909 0.00 0.00 0.00 2.57
594 4679 5.278964 GTTCTCGGGTGAACAGTAAAATC 57.721 43.478 8.33 0.00 44.00 2.17
603 4688 3.564225 AGTTCAAATGTTCTCGGGTGAAC 59.436 43.478 6.18 6.18 43.20 3.18
604 4689 3.813166 GAGTTCAAATGTTCTCGGGTGAA 59.187 43.478 0.00 0.00 0.00 3.18
605 4690 3.399330 GAGTTCAAATGTTCTCGGGTGA 58.601 45.455 0.00 0.00 0.00 4.02
606 4691 2.157668 CGAGTTCAAATGTTCTCGGGTG 59.842 50.000 15.92 0.00 43.67 4.61
607 4692 2.413837 CGAGTTCAAATGTTCTCGGGT 58.586 47.619 15.92 0.00 43.67 5.28
610 4695 2.668457 CTCCCGAGTTCAAATGTTCTCG 59.332 50.000 16.40 16.40 45.89 4.04
611 4696 2.416893 GCTCCCGAGTTCAAATGTTCTC 59.583 50.000 0.00 0.00 0.00 2.87
612 4697 2.224523 TGCTCCCGAGTTCAAATGTTCT 60.225 45.455 0.00 0.00 0.00 3.01
613 4698 2.151202 TGCTCCCGAGTTCAAATGTTC 58.849 47.619 0.00 0.00 0.00 3.18
614 4699 2.154462 CTGCTCCCGAGTTCAAATGTT 58.846 47.619 0.00 0.00 0.00 2.71
615 4700 1.347707 TCTGCTCCCGAGTTCAAATGT 59.652 47.619 0.00 0.00 0.00 2.71
616 4701 2.099141 TCTGCTCCCGAGTTCAAATG 57.901 50.000 0.00 0.00 0.00 2.32
617 4702 2.814336 GTTTCTGCTCCCGAGTTCAAAT 59.186 45.455 0.00 0.00 0.00 2.32
618 4703 2.158813 AGTTTCTGCTCCCGAGTTCAAA 60.159 45.455 0.00 0.00 0.00 2.69
619 4704 1.416401 AGTTTCTGCTCCCGAGTTCAA 59.584 47.619 0.00 0.00 0.00 2.69
621 4706 1.273886 AGAGTTTCTGCTCCCGAGTTC 59.726 52.381 0.00 0.00 36.20 3.01
622 4707 1.001406 CAGAGTTTCTGCTCCCGAGTT 59.999 52.381 0.00 0.00 37.72 3.01
623 4708 0.605589 CAGAGTTTCTGCTCCCGAGT 59.394 55.000 0.00 0.00 37.72 4.18
624 4709 3.432517 CAGAGTTTCTGCTCCCGAG 57.567 57.895 0.00 0.00 37.72 4.63
632 4717 8.678199 TGATATATATAGGACGCAGAGTTTCTG 58.322 37.037 1.75 1.75 46.90 3.02
633 4718 8.679100 GTGATATATATAGGACGCAGAGTTTCT 58.321 37.037 0.00 0.00 0.00 2.52
636 4721 7.120051 AGGTGATATATATAGGACGCAGAGTT 58.880 38.462 0.00 0.00 0.00 3.01
637 4722 6.664714 AGGTGATATATATAGGACGCAGAGT 58.335 40.000 0.00 0.00 0.00 3.24
638 4723 6.205853 GGAGGTGATATATATAGGACGCAGAG 59.794 46.154 0.00 0.00 0.00 3.35
639 4724 6.062749 GGAGGTGATATATATAGGACGCAGA 58.937 44.000 0.00 0.00 0.00 4.26
640 4725 6.065374 AGGAGGTGATATATATAGGACGCAG 58.935 44.000 0.00 0.00 0.00 5.18
641 4726 6.014771 AGGAGGTGATATATATAGGACGCA 57.985 41.667 0.00 0.00 0.00 5.24
642 4727 6.773685 AGAAGGAGGTGATATATATAGGACGC 59.226 42.308 0.00 0.29 0.00 5.19
643 4728 7.255312 GCAGAAGGAGGTGATATATATAGGACG 60.255 44.444 0.00 0.00 0.00 4.79
644 4729 7.782644 AGCAGAAGGAGGTGATATATATAGGAC 59.217 40.741 0.00 0.00 0.00 3.85
645 4730 7.888105 AGCAGAAGGAGGTGATATATATAGGA 58.112 38.462 0.00 0.00 0.00 2.94
646 4731 8.546083 AAGCAGAAGGAGGTGATATATATAGG 57.454 38.462 0.00 0.00 0.00 2.57
647 4732 8.637986 GGAAGCAGAAGGAGGTGATATATATAG 58.362 40.741 0.00 0.00 0.00 1.31
649 4734 6.097554 CGGAAGCAGAAGGAGGTGATATATAT 59.902 42.308 0.00 0.00 0.00 0.86
662 5750 0.461961 CTCCTACCGGAAGCAGAAGG 59.538 60.000 9.46 3.01 39.29 3.46
663 5751 0.461961 CCTCCTACCGGAAGCAGAAG 59.538 60.000 9.46 0.00 39.29 2.85
665 5753 2.058595 GCCTCCTACCGGAAGCAGA 61.059 63.158 9.46 0.00 44.59 4.26
682 5770 1.082756 CGTTCTTTCACCAGCACGC 60.083 57.895 0.00 0.00 0.00 5.34
701 5789 5.290493 ACATGACCGATATACAATGGTGT 57.710 39.130 0.00 0.00 42.09 4.16
704 5792 6.371271 TGCAATACATGACCGATATACAATGG 59.629 38.462 0.00 0.00 0.00 3.16
715 5803 1.372582 ACAGCTGCAATACATGACCG 58.627 50.000 15.27 0.00 0.00 4.79
717 5805 2.749076 TGGAACAGCTGCAATACATGAC 59.251 45.455 15.27 0.00 0.00 3.06
718 5806 3.070476 TGGAACAGCTGCAATACATGA 57.930 42.857 15.27 0.00 0.00 3.07
720 5808 5.052023 GGCATGGAACAGCTGCAATACAT 62.052 47.826 15.27 10.11 45.21 2.29
721 5809 3.781841 GGCATGGAACAGCTGCAATACA 61.782 50.000 15.27 7.95 45.21 2.29
722 5810 1.202336 GGCATGGAACAGCTGCAATAC 60.202 52.381 15.27 1.33 45.21 1.89
723 5811 1.105457 GGCATGGAACAGCTGCAATA 58.895 50.000 15.27 0.00 45.21 1.90
724 5812 1.610554 GGGCATGGAACAGCTGCAAT 61.611 55.000 15.27 0.00 45.21 3.56
725 5813 2.277591 GGGCATGGAACAGCTGCAA 61.278 57.895 15.27 0.00 45.21 4.08
726 5814 2.677524 GGGCATGGAACAGCTGCA 60.678 61.111 15.27 4.00 45.21 4.41
759 5847 8.825745 CCTGCAACACATATTTTTGTTTACTTT 58.174 29.630 0.00 0.00 33.59 2.66
821 5910 9.545105 TCCAGTACAATTTCTCGTTACTAAAAA 57.455 29.630 0.00 0.00 0.00 1.94
823 5912 7.330208 GCTCCAGTACAATTTCTCGTTACTAAA 59.670 37.037 0.00 0.00 0.00 1.85
826 5915 5.169295 GCTCCAGTACAATTTCTCGTTACT 58.831 41.667 0.00 0.00 0.00 2.24
827 5916 4.329256 GGCTCCAGTACAATTTCTCGTTAC 59.671 45.833 0.00 0.00 0.00 2.50
828 5917 4.020928 TGGCTCCAGTACAATTTCTCGTTA 60.021 41.667 0.00 0.00 0.00 3.18
829 5918 3.244422 TGGCTCCAGTACAATTTCTCGTT 60.244 43.478 0.00 0.00 0.00 3.85
830 5919 2.301870 TGGCTCCAGTACAATTTCTCGT 59.698 45.455 0.00 0.00 0.00 4.18
831 5920 2.972625 TGGCTCCAGTACAATTTCTCG 58.027 47.619 0.00 0.00 0.00 4.04
832 5921 4.943705 TCATTGGCTCCAGTACAATTTCTC 59.056 41.667 0.00 0.00 32.89 2.87
833 5922 4.922206 TCATTGGCTCCAGTACAATTTCT 58.078 39.130 0.00 0.00 32.89 2.52
834 5923 5.841957 ATCATTGGCTCCAGTACAATTTC 57.158 39.130 0.00 0.00 32.89 2.17
835 5924 6.096846 GGTTATCATTGGCTCCAGTACAATTT 59.903 38.462 0.00 0.00 32.89 1.82
836 5925 5.594317 GGTTATCATTGGCTCCAGTACAATT 59.406 40.000 0.00 0.00 32.89 2.32
837 5926 5.133221 GGTTATCATTGGCTCCAGTACAAT 58.867 41.667 0.00 0.00 35.36 2.71
838 5927 4.523083 GGTTATCATTGGCTCCAGTACAA 58.477 43.478 0.00 0.00 0.00 2.41
839 5928 3.431626 CGGTTATCATTGGCTCCAGTACA 60.432 47.826 0.00 0.00 0.00 2.90
848 5937 1.455383 CCAGCCCGGTTATCATTGGC 61.455 60.000 0.00 0.00 42.48 4.52
897 5986 0.785979 GAGCCGTTTCGTAAAAGCGA 59.214 50.000 0.00 0.00 39.28 4.93
916 6005 0.688487 TTGACTTCCAACCCCCTACG 59.312 55.000 0.00 0.00 0.00 3.51
917 6006 2.963599 TTTGACTTCCAACCCCCTAC 57.036 50.000 0.00 0.00 33.85 3.18
918 6007 4.140900 TGAAATTTGACTTCCAACCCCCTA 60.141 41.667 0.00 0.00 33.85 3.53
919 6008 3.239449 GAAATTTGACTTCCAACCCCCT 58.761 45.455 0.00 0.00 33.85 4.79
985 6086 4.811761 GGCGTCGATTGCGGTTGC 62.812 66.667 0.00 0.00 43.20 4.17
986 6087 4.499023 CGGCGTCGATTGCGGTTG 62.499 66.667 1.44 0.00 39.00 3.77
987 6088 4.728102 TCGGCGTCGATTGCGGTT 62.728 61.111 8.66 0.00 40.88 4.44
988 6089 4.728102 TTCGGCGTCGATTGCGGT 62.728 61.111 15.13 0.00 45.51 5.68
989 6090 2.680427 GAATTCGGCGTCGATTGCGG 62.680 60.000 15.13 12.10 45.51 5.69
990 6091 1.366494 GAATTCGGCGTCGATTGCG 60.366 57.895 15.13 0.00 45.51 4.85
1153 6260 1.741770 CCGAGAAACCAGGAAGCCG 60.742 63.158 0.00 0.00 0.00 5.52
1197 6304 1.299976 GTCCTTCCGCCCACAGAAT 59.700 57.895 0.00 0.00 0.00 2.40
1199 6306 3.691342 CGTCCTTCCGCCCACAGA 61.691 66.667 0.00 0.00 0.00 3.41
1290 6417 3.790416 AAACGCAGCTTCCTGGCCA 62.790 57.895 4.71 4.71 39.54 5.36
1291 6418 2.564721 AAAACGCAGCTTCCTGGCC 61.565 57.895 0.00 0.00 39.54 5.36
1292 6419 1.372128 CAAAACGCAGCTTCCTGGC 60.372 57.895 0.00 0.00 39.54 4.85
1293 6420 0.040067 GTCAAAACGCAGCTTCCTGG 60.040 55.000 0.00 0.00 39.54 4.45
1294 6421 0.384725 CGTCAAAACGCAGCTTCCTG 60.385 55.000 0.00 0.00 42.82 3.86
1295 6422 1.941812 CGTCAAAACGCAGCTTCCT 59.058 52.632 0.00 0.00 42.82 3.36
1296 6423 4.515107 CGTCAAAACGCAGCTTCC 57.485 55.556 0.00 0.00 42.82 3.46
1318 6445 3.790437 CAGACCCCGCCATCAGCT 61.790 66.667 0.00 0.00 40.39 4.24
1326 6453 4.933064 CGAGATCGCAGACCCCGC 62.933 72.222 0.00 0.00 42.51 6.13
1475 6602 0.179062 ATCTGCAACTCATCCGAGCC 60.179 55.000 0.00 0.00 43.66 4.70
1520 6671 2.282407 TGAATGCAGTGTCATGGATCG 58.718 47.619 0.00 0.00 30.05 3.69
1531 6682 2.030540 GCACACACAGAATGAATGCAGT 60.031 45.455 0.00 0.00 39.69 4.40
1556 6707 0.884704 TCGCAAGGTGCTTCTGTTCC 60.885 55.000 0.00 0.00 42.25 3.62
1569 6725 3.432252 ACGTAGTCTCCAATTTTCGCAAG 59.568 43.478 0.00 0.00 29.74 4.01
1591 6747 7.557358 ACAGTGCAAAAACATATCATCTCCATA 59.443 33.333 0.00 0.00 0.00 2.74
1592 6748 6.379133 ACAGTGCAAAAACATATCATCTCCAT 59.621 34.615 0.00 0.00 0.00 3.41
1593 6749 5.711506 ACAGTGCAAAAACATATCATCTCCA 59.288 36.000 0.00 0.00 0.00 3.86
1622 6967 4.049186 GGTCCGATACGTTACGTAGTCTA 58.951 47.826 21.89 1.58 45.45 2.59
1642 6987 2.956132 AGATGTCCGATCAGATCAGGT 58.044 47.619 11.12 0.00 0.00 4.00
1646 6991 3.251245 ACACGTAGATGTCCGATCAGATC 59.749 47.826 0.00 0.00 0.00 2.75
1648 6993 2.354821 CACACGTAGATGTCCGATCAGA 59.645 50.000 0.00 0.00 0.00 3.27
1649 6994 2.720933 CACACGTAGATGTCCGATCAG 58.279 52.381 0.00 0.00 0.00 2.90
1650 6995 1.202256 GCACACGTAGATGTCCGATCA 60.202 52.381 0.00 0.00 0.00 2.92
1654 7001 0.923403 CATGCACACGTAGATGTCCG 59.077 55.000 0.00 0.00 0.00 4.79
1666 7013 5.120674 CGATTCTGAAGTTAAGTCATGCACA 59.879 40.000 0.00 0.00 0.00 4.57
1737 7086 5.512788 GGCGACATTAAATGAACACAGAATG 59.487 40.000 0.00 0.00 46.00 2.67
1742 7091 2.490115 GGGGCGACATTAAATGAACACA 59.510 45.455 0.00 0.00 0.00 3.72
1759 7108 1.591327 CGCGCATATTTTTGGGGGC 60.591 57.895 8.75 0.00 36.10 5.80
1763 7112 2.559998 AGTTCCGCGCATATTTTTGG 57.440 45.000 8.75 0.00 0.00 3.28
1764 7113 5.741510 TGATTTAGTTCCGCGCATATTTTTG 59.258 36.000 8.75 0.00 0.00 2.44
1769 7118 3.067106 CCTGATTTAGTTCCGCGCATAT 58.933 45.455 8.75 0.00 0.00 1.78
1832 7181 3.193479 CCTGTCATTCTTTTTGGGCCTAC 59.807 47.826 4.53 0.00 0.00 3.18
1836 7185 4.864704 TTACCTGTCATTCTTTTTGGGC 57.135 40.909 0.00 0.00 0.00 5.36
1873 7222 5.535753 ACCCCTTATATGCAATTTTCTGC 57.464 39.130 0.00 0.00 42.95 4.26
1874 7223 8.260114 AGAAAACCCCTTATATGCAATTTTCTG 58.740 33.333 7.61 0.00 41.30 3.02
1875 7224 8.379428 AGAAAACCCCTTATATGCAATTTTCT 57.621 30.769 0.00 0.00 39.24 2.52
1876 7225 8.478066 AGAGAAAACCCCTTATATGCAATTTTC 58.522 33.333 0.00 0.00 35.85 2.29
1877 7226 8.379428 AGAGAAAACCCCTTATATGCAATTTT 57.621 30.769 0.00 0.00 0.00 1.82
1878 7227 7.978099 AGAGAAAACCCCTTATATGCAATTT 57.022 32.000 0.00 0.00 0.00 1.82
1879 7228 9.660544 ATTAGAGAAAACCCCTTATATGCAATT 57.339 29.630 0.00 0.00 0.00 2.32
1880 7229 9.301897 GATTAGAGAAAACCCCTTATATGCAAT 57.698 33.333 0.00 0.00 0.00 3.56
1881 7230 8.278639 TGATTAGAGAAAACCCCTTATATGCAA 58.721 33.333 0.00 0.00 0.00 4.08
1882 7231 7.811282 TGATTAGAGAAAACCCCTTATATGCA 58.189 34.615 0.00 0.00 0.00 3.96
1883 7232 8.691661 TTGATTAGAGAAAACCCCTTATATGC 57.308 34.615 0.00 0.00 0.00 3.14
1933 7282 8.964476 TGAGAAGAAAAATAGTATTAGGCCTG 57.036 34.615 17.99 0.00 0.00 4.85
1979 8067 3.640967 CCTTGGGAAAATGTGTGAAGGAA 59.359 43.478 0.00 0.00 31.85 3.36
1982 8070 2.629617 AGCCTTGGGAAAATGTGTGAAG 59.370 45.455 0.00 0.00 0.00 3.02
2001 8089 3.689002 GACACTGCAGGCCCCTAGC 62.689 68.421 19.93 0.00 42.60 3.42
2193 8342 7.284489 AGTTAATCTTCTGTTTGCTGGTTGTAA 59.716 33.333 0.00 0.00 0.00 2.41
2497 8649 0.808125 GTTGTTGTGTGTGTGCTCCA 59.192 50.000 0.00 0.00 0.00 3.86
2515 8667 2.581208 TTCGGTGTCTGCGGTGTTGT 62.581 55.000 0.00 0.00 0.00 3.32
2984 9146 1.045911 GGTCATCCTTCCTCCGCTCT 61.046 60.000 0.00 0.00 0.00 4.09
3319 9486 5.661056 TCCTCAGTAACTACCTGTCAATG 57.339 43.478 0.00 0.00 0.00 2.82
3320 9487 5.187967 CCTTCCTCAGTAACTACCTGTCAAT 59.812 44.000 0.00 0.00 0.00 2.57
3321 9488 4.527038 CCTTCCTCAGTAACTACCTGTCAA 59.473 45.833 0.00 0.00 0.00 3.18
3322 9489 4.087182 CCTTCCTCAGTAACTACCTGTCA 58.913 47.826 0.00 0.00 0.00 3.58
3323 9490 3.119065 GCCTTCCTCAGTAACTACCTGTC 60.119 52.174 0.00 0.00 0.00 3.51
3324 9491 2.832733 GCCTTCCTCAGTAACTACCTGT 59.167 50.000 0.00 0.00 0.00 4.00
3325 9492 2.832129 TGCCTTCCTCAGTAACTACCTG 59.168 50.000 0.00 0.00 0.00 4.00
3326 9493 3.185880 TGCCTTCCTCAGTAACTACCT 57.814 47.619 0.00 0.00 0.00 3.08
3327 9494 3.863041 CTTGCCTTCCTCAGTAACTACC 58.137 50.000 0.00 0.00 0.00 3.18
3374 9541 5.737063 GCGGGATCAAAATGCAATTCTACAT 60.737 40.000 0.00 0.00 33.67 2.29
3396 9563 0.570734 CTGCTCGTACGGTATTTGCG 59.429 55.000 16.52 4.28 0.00 4.85
3616 10210 2.795329 AGGGCAGAAACCATGTTACAG 58.205 47.619 0.00 0.00 0.00 2.74
3731 10464 9.906111 GCTATATTTTGCAATGAAAAACTTAGC 57.094 29.630 18.65 18.65 35.47 3.09
3744 10477 4.622695 GCCCAACCAAGCTATATTTTGCAA 60.623 41.667 0.00 0.00 0.00 4.08
3756 10489 3.284449 ACGAACGCCCAACCAAGC 61.284 61.111 0.00 0.00 0.00 4.01
3797 10530 8.922931 AAGAAACAAGCCCAAATATCAAAAAT 57.077 26.923 0.00 0.00 0.00 1.82
3802 10535 8.593945 ATTAGAAGAAACAAGCCCAAATATCA 57.406 30.769 0.00 0.00 0.00 2.15
3915 10763 7.039882 AGCGCAGTTAAACAATAGTACTACAT 58.960 34.615 11.47 0.00 0.00 2.29
4044 10895 0.317160 TGGTACAGTGCTTCTCGTGG 59.683 55.000 0.00 0.00 0.00 4.94
4073 10928 1.888512 TCAGGGAGTGAAAATGCTTGC 59.111 47.619 0.00 0.00 27.70 4.01
4144 11061 1.705337 CTGGGGCGTCGCATACAAAG 61.705 60.000 20.50 6.48 35.25 2.77
4275 11192 2.848694 TCCTTTTCTGGATGAGATGCCT 59.151 45.455 0.00 0.00 0.00 4.75
4336 11253 1.541588 GAAAGGCGGCTGAAAACTGAT 59.458 47.619 14.21 0.00 0.00 2.90
4406 11323 3.117046 GCGCTCTAACTGAAGTATGACC 58.883 50.000 0.00 0.00 0.00 4.02
4426 11343 1.128692 GTTCGCTGTACATTCAGTGGC 59.871 52.381 0.00 0.00 43.51 5.01
4519 11454 1.373570 GCCTTGGTGCACTGATAGTC 58.626 55.000 17.98 0.00 0.00 2.59
4546 11481 2.744202 ACCACTTGAAGCTCTTATTGCG 59.256 45.455 0.00 0.00 35.28 4.85
4551 11486 4.202315 TGCTTGTACCACTTGAAGCTCTTA 60.202 41.667 12.79 0.00 41.19 2.10
4559 11494 2.813754 GAGCATTGCTTGTACCACTTGA 59.186 45.455 13.35 0.00 39.88 3.02
4599 11630 3.502123 TGACTGTTGGTTCTAAAGGGG 57.498 47.619 0.00 0.00 0.00 4.79
4684 11715 4.963318 TGGATCTATGGGTTGAGTGATC 57.037 45.455 0.00 0.00 0.00 2.92
4696 11727 1.586422 CACCGGCAGTTGGATCTATG 58.414 55.000 0.00 0.00 0.00 2.23
4697 11728 0.179045 GCACCGGCAGTTGGATCTAT 60.179 55.000 0.00 0.00 40.72 1.98
4710 11741 2.192861 TTTGCTCTTGGTGCACCGG 61.193 57.895 30.07 23.95 40.40 5.28
4712 11743 1.109323 AGGTTTGCTCTTGGTGCACC 61.109 55.000 29.67 29.67 40.40 5.01
4734 11765 5.127682 TGTGTATCTCTTGCAGCTCTTATCA 59.872 40.000 0.00 0.00 0.00 2.15
4737 11768 4.220602 TGTGTGTATCTCTTGCAGCTCTTA 59.779 41.667 0.00 0.00 0.00 2.10
4757 11788 8.567948 ACTAATTTGAGAAGTGTAACCATTGTG 58.432 33.333 0.00 0.00 37.80 3.33
4758 11789 8.691661 ACTAATTTGAGAAGTGTAACCATTGT 57.308 30.769 0.00 0.00 37.80 2.71
4782 11906 0.814010 AGTTTGCTCCACACGGTGAC 60.814 55.000 16.29 0.00 35.23 3.67
4788 11912 1.331756 CACTGACAGTTTGCTCCACAC 59.668 52.381 5.04 0.00 0.00 3.82
4811 11935 2.995939 CAGTTGCAGCGTATTCTCTTGA 59.004 45.455 0.00 0.00 0.00 3.02
4837 11961 0.997932 CATGTCTTGCAGCTCTCGTC 59.002 55.000 0.00 0.00 0.00 4.20
4968 12092 0.592637 CAACTTTGTGCCATCTCGCA 59.407 50.000 0.00 0.00 36.08 5.10
5080 12204 4.001652 AGATATGGCAATGAAGAGCGATG 58.998 43.478 0.00 0.00 31.56 3.84
5112 12237 4.634004 CGTGCTGGTAAAGGATTTCACATA 59.366 41.667 0.00 0.00 40.09 2.29
5149 12289 2.527100 CTTGCTAGCAGCTTCAATTGC 58.473 47.619 18.45 0.00 42.97 3.56
5164 12304 4.764823 TCATTCGATAACCAAAACCTTGCT 59.235 37.500 0.00 0.00 0.00 3.91
5189 12329 2.618709 CAGTCCCCCTCGATAAAATTGC 59.381 50.000 0.00 0.00 0.00 3.56
5198 12338 1.252904 CGTTTACCAGTCCCCCTCGA 61.253 60.000 0.00 0.00 0.00 4.04
5200 12340 0.036671 CACGTTTACCAGTCCCCCTC 60.037 60.000 0.00 0.00 0.00 4.30
5306 12446 5.053978 AGAGGTCTCTGGTTTGAATGTTT 57.946 39.130 0.00 0.00 38.75 2.83
5314 12454 4.503714 TGTTTTGAGAGGTCTCTGGTTT 57.496 40.909 5.09 0.00 43.25 3.27
5360 12500 1.334160 TGCCGTGAGAGTTGGTTCTA 58.666 50.000 0.00 0.00 0.00 2.10
5375 12515 9.436957 AAAGTACATAGGATCTAATTAATGCCG 57.563 33.333 0.00 0.00 0.00 5.69
5471 12620 1.724429 TGGTTACGGCGTATTTCCAC 58.276 50.000 21.66 14.91 0.00 4.02
5472 12621 2.281517 CATGGTTACGGCGTATTTCCA 58.718 47.619 27.62 27.62 0.00 3.53
5483 12632 8.996024 AAATTTTAAGATTTCCCATGGTTACG 57.004 30.769 11.73 0.00 0.00 3.18
5588 12742 4.954202 AGTAGTGATCAATCCGAGTGGTAA 59.046 41.667 0.00 0.00 36.30 2.85
5622 14159 9.307121 CAGTACTGATAAAAACAGATCACCTAG 57.693 37.037 18.45 0.00 38.55 3.02
5685 14483 7.590322 CCGAATGCTGATGAAATTATCTCAAAG 59.410 37.037 0.00 0.00 0.00 2.77
5693 14491 4.198530 TCTGCCGAATGCTGATGAAATTA 58.801 39.130 0.00 0.00 42.28 1.40
5714 14516 7.413328 GCCAAAAAGAAAACATGCATATCCTTC 60.413 37.037 0.00 0.40 0.00 3.46
5765 14625 9.806448 TGCAAATCCCAACAGTACATATTATAT 57.194 29.630 0.00 0.00 0.00 0.86
5766 14626 9.283768 CTGCAAATCCCAACAGTACATATTATA 57.716 33.333 0.00 0.00 0.00 0.98
5767 14627 7.231317 CCTGCAAATCCCAACAGTACATATTAT 59.769 37.037 0.00 0.00 0.00 1.28
5847 14707 1.205893 CTCAGCCTCCTGAACAGTACC 59.794 57.143 1.18 0.00 46.84 3.34
5948 14808 4.593157 TGACAACCGAAAGAAACGAATTG 58.407 39.130 0.00 0.00 34.96 2.32
5959 15490 6.582677 ATGAATTAACCATGACAACCGAAA 57.417 33.333 0.00 0.00 0.00 3.46
5961 15492 7.051000 TCATATGAATTAACCATGACAACCGA 58.949 34.615 1.98 0.00 0.00 4.69
5963 15494 8.450578 TCTCATATGAATTAACCATGACAACC 57.549 34.615 6.90 0.00 0.00 3.77
6048 15580 1.014564 GTCTGCCGTACACTTCCTGC 61.015 60.000 0.00 0.00 0.00 4.85
6103 15635 3.959991 GACTCTTGTCGCTGGGGGC 62.960 68.421 0.00 0.00 33.15 5.80
6131 15664 3.838903 ACGTATAATCCTCATCCCCTTCC 59.161 47.826 0.00 0.00 0.00 3.46
6136 15669 4.767928 ACTCAGACGTATAATCCTCATCCC 59.232 45.833 0.00 0.00 0.00 3.85
6222 15756 2.092323 GGACTAAAGGCCTTTGCGAAT 58.908 47.619 35.99 18.54 38.85 3.34
6669 16220 4.224433 GTGAAATGTGTCACTTCATGCTG 58.776 43.478 9.99 0.00 43.82 4.41
6752 17928 9.301153 CAAATAGTGGTCAAACTAATTATTGCC 57.699 33.333 0.00 0.00 36.28 4.52
6774 17950 9.844257 TTAAATTTTGGTCAAATCTGGTCAAAT 57.156 25.926 0.00 0.00 33.60 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.