Multiple sequence alignment - TraesCS4D01G306500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G306500 chr4D 100.000 5464 0 0 1537 7000 474860132 474854669 0.000000e+00 10091
1 TraesCS4D01G306500 chr4D 100.000 1309 0 0 1 1309 474861668 474860360 0.000000e+00 2418
2 TraesCS4D01G306500 chr4D 84.360 211 33 0 485 695 47524932 47525142 2.560000e-49 207
3 TraesCS4D01G306500 chr4B 97.062 3744 74 13 3262 7000 599230180 599226468 0.000000e+00 6272
4 TraesCS4D01G306500 chr4B 95.415 1745 57 15 1546 3284 599232466 599230739 0.000000e+00 2758
5 TraesCS4D01G306500 chr4B 90.153 782 60 8 3 783 599434062 599434827 0.000000e+00 1002
6 TraesCS4D01G306500 chr4B 96.562 320 10 1 2966 3284 599230667 599230348 4.810000e-146 529
7 TraesCS4D01G306500 chr4B 82.121 481 63 14 1787 2259 243847389 243846924 2.370000e-104 390
8 TraesCS4D01G306500 chr4B 88.732 142 15 1 2112 2252 311411116 311411257 9.330000e-39 172
9 TraesCS4D01G306500 chr4A 97.112 3670 82 14 3312 6974 681362705 681366357 0.000000e+00 6168
10 TraesCS4D01G306500 chr4A 94.107 1646 51 13 1613 3254 681361107 681362710 0.000000e+00 2460
11 TraesCS4D01G306500 chr4A 84.912 570 22 12 790 1309 681360404 681360959 1.040000e-142 518
12 TraesCS4D01G306500 chr4A 94.025 318 14 2 6683 7000 681614555 681614867 1.770000e-130 477
13 TraesCS4D01G306500 chr4A 79.032 496 78 13 1 487 636358249 636358727 4.080000e-82 316
14 TraesCS4D01G306500 chr6B 91.897 543 33 8 1546 2084 146382049 146382584 0.000000e+00 749
15 TraesCS4D01G306500 chr6B 84.186 215 28 5 485 696 236569909 236569698 3.310000e-48 204
16 TraesCS4D01G306500 chr2B 84.685 444 54 8 1822 2259 193138488 193138053 1.390000e-116 431
17 TraesCS4D01G306500 chr2B 80.444 450 64 22 1822 2252 409251117 409251561 8.760000e-84 322
18 TraesCS4D01G306500 chr2B 86.592 179 21 3 2475 2653 193137979 193137804 1.990000e-45 195
19 TraesCS4D01G306500 chr1A 76.295 502 80 25 16 487 408071177 408070685 1.520000e-56 231
20 TraesCS4D01G306500 chr1A 84.651 215 29 4 485 696 337017912 337017699 1.980000e-50 211
21 TraesCS4D01G306500 chr5D 83.621 232 32 4 485 714 400417772 400417545 5.500000e-51 213
22 TraesCS4D01G306500 chr5D 84.507 213 31 2 485 696 360979227 360979016 7.110000e-50 209
23 TraesCS4D01G306500 chr3A 84.475 219 31 3 485 701 9829287 9829504 5.500000e-51 213
24 TraesCS4D01G306500 chr3A 83.598 189 29 2 301 487 33273695 33273883 7.220000e-40 176
25 TraesCS4D01G306500 chr7D 84.038 213 31 3 485 696 564658719 564658929 1.190000e-47 202
26 TraesCS4D01G306500 chr1B 85.340 191 26 2 10 199 512981359 512981170 5.540000e-46 196
27 TraesCS4D01G306500 chr3D 82.949 217 27 10 485 694 589707918 589707705 3.330000e-43 187
28 TraesCS4D01G306500 chr5B 81.250 208 34 4 281 487 706369006 706369209 5.620000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G306500 chr4D 474854669 474861668 6999 True 6254.500000 10091 100.000000 1 7000 2 chr4D.!!$R1 6999
1 TraesCS4D01G306500 chr4B 599226468 599232466 5998 True 3186.333333 6272 96.346333 1546 7000 3 chr4B.!!$R2 5454
2 TraesCS4D01G306500 chr4B 599434062 599434827 765 False 1002.000000 1002 90.153000 3 783 1 chr4B.!!$F2 780
3 TraesCS4D01G306500 chr4A 681360404 681366357 5953 False 3048.666667 6168 92.043667 790 6974 3 chr4A.!!$F3 6184
4 TraesCS4D01G306500 chr6B 146382049 146382584 535 False 749.000000 749 91.897000 1546 2084 1 chr6B.!!$F1 538
5 TraesCS4D01G306500 chr2B 193137804 193138488 684 True 313.000000 431 85.638500 1822 2653 2 chr2B.!!$R1 831

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
460 461 0.028505 GCAGCAGCCACATCATAACG 59.971 55.000 0.00 0.00 33.58 3.18 F
486 487 0.106149 GTCCACGTCCACTCCAAGTT 59.894 55.000 0.00 0.00 0.00 2.66 F
511 512 0.107848 AAATTAGACACGGCGGGGAG 60.108 55.000 16.11 1.22 0.00 4.30 F
1089 1138 0.250234 TGGAAGCCATCAGAACCTCG 59.750 55.000 0.00 0.00 0.00 4.63 F
2016 2097 0.320697 ACTCTCGGTGCAAAGGTACC 59.679 55.000 2.73 2.73 45.39 3.34 F
2386 2476 1.278985 TGTATCCTGCCTTCTGTGTGG 59.721 52.381 0.00 0.00 0.00 4.17 F
2391 2481 1.278985 CCTGCCTTCTGTGTGGTATCA 59.721 52.381 0.00 0.00 0.00 2.15 F
2465 2559 1.777941 TGCATAAATCATGGGCAGCA 58.222 45.000 0.00 0.00 34.97 4.41 F
3328 4310 2.212652 GATCATACGCAGTGGCAATGA 58.787 47.619 20.42 9.47 45.73 2.57 F
4502 5484 1.021968 TATGATTGCTGCTGCTGCTG 58.978 50.000 27.67 16.73 40.48 4.41 F
5276 6258 2.422479 CTCAAACATGAGGCATCTGTGG 59.578 50.000 0.00 0.00 32.56 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1277 1326 0.249398 ACCGAATCCCACCGAAGAAG 59.751 55.000 0.00 0.00 0.00 2.85 R
1536 1587 0.537143 AATTGCTGGCCTCACACGAA 60.537 50.000 3.32 0.00 0.00 3.85 R
1537 1588 0.537143 AAATTGCTGGCCTCACACGA 60.537 50.000 3.32 0.00 0.00 4.35 R
2297 2387 1.213678 TGAGAAGCCTTAGCCATGCAT 59.786 47.619 0.00 0.00 41.25 3.96 R
3311 4293 1.085893 TGTCATTGCCACTGCGTATG 58.914 50.000 0.00 0.00 41.78 2.39 R
4154 5136 1.767088 TCTCTGATCATTCTGCCCCAG 59.233 52.381 0.00 0.00 0.00 4.45 R
4199 5181 3.779183 TCAGGATCCAGAGAGAAAATGCT 59.221 43.478 15.82 0.00 0.00 3.79 R
4303 5285 3.981071 AATTCGATGACCACCTCTTCA 57.019 42.857 0.00 0.00 0.00 3.02 R
4922 5904 2.156098 GGAGCTCTGTAGATACCCGAG 58.844 57.143 14.64 3.38 0.00 4.63 R
5537 6519 3.194755 TCCAGAGCTGCGTAAAAGATGTA 59.805 43.478 0.00 0.00 0.00 2.29 R
6902 7893 1.832167 GGCTTTGCCTGGTCAACCA 60.832 57.895 1.20 1.20 46.69 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.602878 GAAACACTATCGCTCAACCGA 58.397 47.619 0.00 0.00 41.98 4.69
41 42 1.663379 ATCGCTCAACCGACGGATGA 61.663 55.000 23.45 23.45 40.40 2.92
44 45 0.652592 GCTCAACCGACGGATGATTG 59.347 55.000 24.85 16.37 34.12 2.67
58 59 2.789203 GATTGTGCGCTCGTCGACC 61.789 63.158 9.73 0.00 41.67 4.79
75 76 0.898320 ACCTTCTCCATGACCGTCAG 59.102 55.000 7.41 0.00 0.00 3.51
110 111 7.040478 TGGATCAAACCACTTAGAAACAATCTG 60.040 37.037 0.00 0.00 35.46 2.90
113 114 8.149973 TCAAACCACTTAGAAACAATCTGTAC 57.850 34.615 0.00 0.00 39.30 2.90
114 115 7.990886 TCAAACCACTTAGAAACAATCTGTACT 59.009 33.333 0.00 0.00 39.30 2.73
115 116 8.621286 CAAACCACTTAGAAACAATCTGTACTT 58.379 33.333 0.00 0.00 39.30 2.24
116 117 9.841295 AAACCACTTAGAAACAATCTGTACTTA 57.159 29.630 0.00 0.00 39.30 2.24
117 118 9.490379 AACCACTTAGAAACAATCTGTACTTAG 57.510 33.333 0.00 0.00 39.30 2.18
118 119 8.648693 ACCACTTAGAAACAATCTGTACTTAGT 58.351 33.333 0.00 0.00 39.30 2.24
133 134 7.852971 TGTACTTAGTACAGTTTTTGCAACT 57.147 32.000 19.89 0.00 42.99 3.16
134 135 8.271312 TGTACTTAGTACAGTTTTTGCAACTT 57.729 30.769 19.89 0.00 42.99 2.66
135 136 8.178964 TGTACTTAGTACAGTTTTTGCAACTTG 58.821 33.333 19.89 0.00 42.99 3.16
136 137 6.033966 ACTTAGTACAGTTTTTGCAACTTGC 58.966 36.000 6.82 6.82 45.29 4.01
149 150 4.799419 GCAACTTGCACATTGTTTCAAT 57.201 36.364 8.97 0.00 44.26 2.57
150 151 5.159399 GCAACTTGCACATTGTTTCAATT 57.841 34.783 8.97 0.00 44.26 2.32
151 152 4.965158 GCAACTTGCACATTGTTTCAATTG 59.035 37.500 8.97 0.00 44.26 2.32
152 153 5.503498 CAACTTGCACATTGTTTCAATTGG 58.497 37.500 5.42 0.00 0.00 3.16
153 154 3.560896 ACTTGCACATTGTTTCAATTGGC 59.439 39.130 5.42 0.00 0.00 4.52
154 155 3.472283 TGCACATTGTTTCAATTGGCT 57.528 38.095 5.42 0.00 0.00 4.75
155 156 3.806380 TGCACATTGTTTCAATTGGCTT 58.194 36.364 5.42 0.00 0.00 4.35
156 157 3.560481 TGCACATTGTTTCAATTGGCTTG 59.440 39.130 5.42 0.00 36.09 4.01
157 158 3.808726 GCACATTGTTTCAATTGGCTTGA 59.191 39.130 5.42 0.00 42.15 3.02
158 159 4.318974 GCACATTGTTTCAATTGGCTTGAC 60.319 41.667 5.42 0.00 43.54 3.18
159 160 4.211794 CACATTGTTTCAATTGGCTTGACC 59.788 41.667 5.42 0.00 43.54 4.02
160 161 2.791383 TGTTTCAATTGGCTTGACCG 57.209 45.000 5.42 0.00 43.54 4.79
161 162 2.302260 TGTTTCAATTGGCTTGACCGA 58.698 42.857 5.42 0.00 43.54 4.69
162 163 2.690497 TGTTTCAATTGGCTTGACCGAA 59.310 40.909 5.42 0.00 43.54 4.30
163 164 3.131223 TGTTTCAATTGGCTTGACCGAAA 59.869 39.130 5.42 0.00 43.54 3.46
164 165 3.363341 TTCAATTGGCTTGACCGAAAC 57.637 42.857 5.42 0.00 43.54 2.78
165 166 2.302260 TCAATTGGCTTGACCGAAACA 58.698 42.857 5.42 0.00 43.94 2.83
166 167 2.690497 TCAATTGGCTTGACCGAAACAA 59.310 40.909 5.42 0.00 43.94 2.83
167 168 3.131223 TCAATTGGCTTGACCGAAACAAA 59.869 39.130 5.42 0.00 43.94 2.83
168 169 4.057432 CAATTGGCTTGACCGAAACAAAT 58.943 39.130 0.00 0.00 43.94 2.32
169 170 2.791383 TGGCTTGACCGAAACAAATG 57.209 45.000 0.00 0.00 43.94 2.32
170 171 1.339610 TGGCTTGACCGAAACAAATGG 59.660 47.619 0.00 0.00 43.94 3.16
171 172 1.418373 GCTTGACCGAAACAAATGGC 58.582 50.000 0.00 0.00 0.00 4.40
172 173 1.000274 GCTTGACCGAAACAAATGGCT 60.000 47.619 0.00 0.00 0.00 4.75
173 174 2.227865 GCTTGACCGAAACAAATGGCTA 59.772 45.455 0.00 0.00 0.00 3.93
174 175 3.670627 GCTTGACCGAAACAAATGGCTAG 60.671 47.826 0.00 0.00 0.00 3.42
175 176 3.134574 TGACCGAAACAAATGGCTAGT 57.865 42.857 0.00 0.00 0.00 2.57
176 177 3.482436 TGACCGAAACAAATGGCTAGTT 58.518 40.909 0.00 0.00 0.00 2.24
177 178 3.252215 TGACCGAAACAAATGGCTAGTTG 59.748 43.478 8.81 8.81 37.85 3.16
178 179 2.030274 ACCGAAACAAATGGCTAGTTGC 60.030 45.455 10.34 0.00 35.40 4.17
179 180 2.030363 CCGAAACAAATGGCTAGTTGCA 60.030 45.455 10.34 0.00 45.15 4.08
180 181 3.236816 CGAAACAAATGGCTAGTTGCAG 58.763 45.455 10.34 0.00 45.15 4.41
181 182 3.058293 CGAAACAAATGGCTAGTTGCAGA 60.058 43.478 10.34 0.00 45.15 4.26
182 183 3.923017 AACAAATGGCTAGTTGCAGAC 57.077 42.857 10.34 0.00 45.15 3.51
183 184 2.162681 ACAAATGGCTAGTTGCAGACC 58.837 47.619 10.34 0.00 45.15 3.85
184 185 1.131126 CAAATGGCTAGTTGCAGACCG 59.869 52.381 0.00 0.00 45.15 4.79
185 186 1.026718 AATGGCTAGTTGCAGACCGC 61.027 55.000 0.00 0.00 45.15 5.68
186 187 3.188786 GGCTAGTTGCAGACCGCG 61.189 66.667 0.00 0.00 46.97 6.46
187 188 3.854459 GCTAGTTGCAGACCGCGC 61.854 66.667 0.00 0.00 46.97 6.86
188 189 2.432456 CTAGTTGCAGACCGCGCA 60.432 61.111 8.75 0.00 46.97 6.09
189 190 2.730672 CTAGTTGCAGACCGCGCAC 61.731 63.158 8.75 0.00 46.97 5.34
190 191 3.220999 TAGTTGCAGACCGCGCACT 62.221 57.895 8.75 2.71 46.97 4.40
191 192 4.077188 GTTGCAGACCGCGCACTC 62.077 66.667 8.75 0.00 46.97 3.51
192 193 4.600576 TTGCAGACCGCGCACTCA 62.601 61.111 8.75 1.83 46.97 3.41
195 196 4.700365 CAGACCGCGCACTCACGA 62.700 66.667 8.75 0.00 34.06 4.35
196 197 4.702081 AGACCGCGCACTCACGAC 62.702 66.667 8.75 0.00 34.06 4.34
202 203 3.108289 CGCACTCACGACCAGCAG 61.108 66.667 0.00 0.00 34.06 4.24
203 204 3.418068 GCACTCACGACCAGCAGC 61.418 66.667 0.00 0.00 0.00 5.25
204 205 2.740055 CACTCACGACCAGCAGCC 60.740 66.667 0.00 0.00 0.00 4.85
205 206 4.363990 ACTCACGACCAGCAGCCG 62.364 66.667 0.00 0.00 0.00 5.52
206 207 4.056125 CTCACGACCAGCAGCCGA 62.056 66.667 0.00 0.00 0.00 5.54
207 208 3.978723 CTCACGACCAGCAGCCGAG 62.979 68.421 0.00 0.00 0.00 4.63
208 209 4.363990 CACGACCAGCAGCCGAGT 62.364 66.667 0.00 0.00 0.00 4.18
209 210 4.363990 ACGACCAGCAGCCGAGTG 62.364 66.667 0.00 0.00 0.00 3.51
220 221 3.699894 CCGAGTGCTCCAGCCTGT 61.700 66.667 0.00 0.00 41.18 4.00
221 222 2.351244 CCGAGTGCTCCAGCCTGTA 61.351 63.158 0.00 0.00 41.18 2.74
222 223 1.140589 CGAGTGCTCCAGCCTGTAG 59.859 63.158 0.00 0.00 41.18 2.74
223 224 1.519719 GAGTGCTCCAGCCTGTAGG 59.480 63.158 0.00 0.00 41.18 3.18
224 225 0.972983 GAGTGCTCCAGCCTGTAGGA 60.973 60.000 1.17 0.00 41.18 2.94
225 226 1.219393 GTGCTCCAGCCTGTAGGAC 59.781 63.158 1.17 0.00 41.18 3.85
226 227 2.351244 TGCTCCAGCCTGTAGGACG 61.351 63.158 1.17 0.00 41.18 4.79
227 228 2.352032 GCTCCAGCCTGTAGGACGT 61.352 63.158 1.17 0.00 37.39 4.34
228 229 1.810532 CTCCAGCCTGTAGGACGTC 59.189 63.158 7.13 7.13 37.39 4.34
229 230 0.965866 CTCCAGCCTGTAGGACGTCA 60.966 60.000 18.91 0.00 37.39 4.35
230 231 1.215647 CCAGCCTGTAGGACGTCAC 59.784 63.158 18.91 8.54 37.39 3.67
231 232 1.215647 CAGCCTGTAGGACGTCACC 59.784 63.158 18.91 0.62 37.39 4.02
232 233 2.181021 GCCTGTAGGACGTCACCG 59.819 66.667 18.91 4.21 37.39 4.94
233 234 2.181021 CCTGTAGGACGTCACCGC 59.819 66.667 18.91 4.86 37.70 5.68
234 235 2.341101 CCTGTAGGACGTCACCGCT 61.341 63.158 18.91 7.60 37.70 5.52
235 236 1.154016 CTGTAGGACGTCACCGCTG 60.154 63.158 18.91 4.73 37.70 5.18
236 237 1.583495 CTGTAGGACGTCACCGCTGA 61.583 60.000 18.91 0.00 37.70 4.26
237 238 1.154073 GTAGGACGTCACCGCTGAC 60.154 63.158 18.91 0.49 43.17 3.51
238 239 2.338015 TAGGACGTCACCGCTGACC 61.338 63.158 18.91 0.00 43.64 4.02
239 240 3.986006 GGACGTCACCGCTGACCA 61.986 66.667 18.91 0.00 43.64 4.02
240 241 2.733593 GACGTCACCGCTGACCAC 60.734 66.667 11.55 0.00 43.64 4.16
241 242 4.295119 ACGTCACCGCTGACCACC 62.295 66.667 5.30 0.00 43.64 4.61
265 266 3.792047 CGTAGGTCGTCGTCGCCA 61.792 66.667 14.96 2.59 36.34 5.69
266 267 2.099831 GTAGGTCGTCGTCGCCAG 59.900 66.667 14.96 0.00 36.34 4.85
267 268 3.129502 TAGGTCGTCGTCGCCAGG 61.130 66.667 14.96 0.00 36.34 4.45
268 269 3.610619 TAGGTCGTCGTCGCCAGGA 62.611 63.158 14.96 1.47 36.34 3.86
269 270 4.773117 GGTCGTCGTCGCCAGGAC 62.773 72.222 9.68 0.00 42.48 3.85
276 277 3.103911 GTCGCCAGGACGTCGTTG 61.104 66.667 8.27 9.72 35.61 4.10
279 280 4.980805 GCCAGGACGTCGTTGCCA 62.981 66.667 20.16 0.00 0.00 4.92
280 281 2.280524 CCAGGACGTCGTTGCCAA 60.281 61.111 8.27 0.00 0.00 4.52
281 282 2.317609 CCAGGACGTCGTTGCCAAG 61.318 63.158 8.27 0.00 0.00 3.61
282 283 2.665185 AGGACGTCGTTGCCAAGC 60.665 61.111 9.92 0.00 0.00 4.01
283 284 4.072088 GGACGTCGTTGCCAAGCG 62.072 66.667 9.92 0.00 0.00 4.68
284 285 4.719616 GACGTCGTTGCCAAGCGC 62.720 66.667 0.00 0.00 38.31 5.92
287 288 4.683334 GTCGTTGCCAAGCGCCAC 62.683 66.667 2.29 0.00 36.24 5.01
288 289 4.927782 TCGTTGCCAAGCGCCACT 62.928 61.111 2.29 0.00 36.24 4.00
289 290 4.688419 CGTTGCCAAGCGCCACTG 62.688 66.667 2.29 0.00 36.24 3.66
295 296 2.358615 CAAGCGCCACTGCCTGTA 60.359 61.111 2.29 0.00 34.65 2.74
296 297 2.046892 AAGCGCCACTGCCTGTAG 60.047 61.111 2.29 0.00 34.65 2.74
297 298 3.612247 AAGCGCCACTGCCTGTAGG 62.612 63.158 2.29 0.00 34.65 3.18
298 299 4.394712 GCGCCACTGCCTGTAGGT 62.395 66.667 0.00 0.00 37.57 3.08
299 300 2.434884 CGCCACTGCCTGTAGGTG 60.435 66.667 0.00 0.00 37.57 4.00
300 301 2.942796 CGCCACTGCCTGTAGGTGA 61.943 63.158 0.00 0.00 37.57 4.02
301 302 1.078848 GCCACTGCCTGTAGGTGAG 60.079 63.158 0.00 0.00 37.57 3.51
302 303 1.599047 CCACTGCCTGTAGGTGAGG 59.401 63.158 0.00 0.00 37.57 3.86
303 304 1.599047 CACTGCCTGTAGGTGAGGG 59.401 63.158 0.00 0.00 37.57 4.30
304 305 2.294078 ACTGCCTGTAGGTGAGGGC 61.294 63.158 0.00 0.00 44.31 5.19
305 306 3.376935 CTGCCTGTAGGTGAGGGCG 62.377 68.421 0.00 0.00 46.72 6.13
306 307 3.391382 GCCTGTAGGTGAGGGCGT 61.391 66.667 0.00 0.00 37.57 5.68
307 308 2.893398 CCTGTAGGTGAGGGCGTC 59.107 66.667 0.00 0.00 0.00 5.19
308 309 2.490217 CTGTAGGTGAGGGCGTCG 59.510 66.667 2.41 0.00 0.00 5.12
309 310 2.282674 TGTAGGTGAGGGCGTCGT 60.283 61.111 2.41 0.00 0.00 4.34
310 311 2.267681 CTGTAGGTGAGGGCGTCGTC 62.268 65.000 2.06 2.06 0.00 4.20
311 312 3.129502 TAGGTGAGGGCGTCGTCG 61.130 66.667 5.13 0.00 40.37 5.12
312 313 3.907260 TAGGTGAGGGCGTCGTCGT 62.907 63.158 5.13 0.00 39.49 4.34
314 315 4.034258 GTGAGGGCGTCGTCGTGA 62.034 66.667 5.13 0.00 39.49 4.35
315 316 3.733960 TGAGGGCGTCGTCGTGAG 61.734 66.667 5.13 0.00 39.49 3.51
316 317 3.735029 GAGGGCGTCGTCGTGAGT 61.735 66.667 0.00 0.00 39.49 3.41
317 318 3.948086 GAGGGCGTCGTCGTGAGTG 62.948 68.421 0.00 0.00 39.49 3.51
319 320 4.994201 GGCGTCGTCGTGAGTGCA 62.994 66.667 3.66 0.00 39.49 4.57
320 321 2.805353 GCGTCGTCGTGAGTGCAT 60.805 61.111 3.66 0.00 39.49 3.96
321 322 2.778997 GCGTCGTCGTGAGTGCATC 61.779 63.158 3.66 0.00 39.49 3.91
322 323 2.152699 CGTCGTCGTGAGTGCATCC 61.153 63.158 0.00 0.00 0.00 3.51
323 324 1.080772 GTCGTCGTGAGTGCATCCA 60.081 57.895 0.00 0.00 0.00 3.41
324 325 0.458543 GTCGTCGTGAGTGCATCCAT 60.459 55.000 0.00 0.00 0.00 3.41
325 326 0.458370 TCGTCGTGAGTGCATCCATG 60.458 55.000 0.00 0.00 0.00 3.66
337 338 2.251409 CATCCATGCCGAATCTCTGT 57.749 50.000 0.00 0.00 0.00 3.41
338 339 2.141517 CATCCATGCCGAATCTCTGTC 58.858 52.381 0.00 0.00 0.00 3.51
339 340 0.103026 TCCATGCCGAATCTCTGTCG 59.897 55.000 0.00 0.00 38.24 4.35
340 341 1.493950 CCATGCCGAATCTCTGTCGC 61.494 60.000 0.00 0.00 37.18 5.19
341 342 1.227380 ATGCCGAATCTCTGTCGCC 60.227 57.895 0.00 0.00 37.18 5.54
342 343 1.960040 ATGCCGAATCTCTGTCGCCA 61.960 55.000 0.00 0.00 37.18 5.69
343 344 1.447838 GCCGAATCTCTGTCGCCAA 60.448 57.895 0.00 0.00 37.18 4.52
344 345 1.019278 GCCGAATCTCTGTCGCCAAA 61.019 55.000 0.00 0.00 37.18 3.28
345 346 0.721718 CCGAATCTCTGTCGCCAAAC 59.278 55.000 0.00 0.00 37.18 2.93
346 347 0.366871 CGAATCTCTGTCGCCAAACG 59.633 55.000 0.00 0.00 45.62 3.60
347 348 0.095417 GAATCTCTGTCGCCAAACGC 59.905 55.000 0.00 0.00 43.23 4.84
348 349 1.298859 AATCTCTGTCGCCAAACGCC 61.299 55.000 0.00 0.00 43.23 5.68
349 350 2.172483 ATCTCTGTCGCCAAACGCCT 62.172 55.000 0.00 0.00 43.23 5.52
350 351 2.357034 TCTGTCGCCAAACGCCTC 60.357 61.111 0.00 0.00 43.23 4.70
351 352 3.423154 CTGTCGCCAAACGCCTCC 61.423 66.667 0.00 0.00 43.23 4.30
363 364 3.148279 GCCTCCCGTCGACCAGAT 61.148 66.667 10.58 0.00 0.00 2.90
364 365 3.121019 CCTCCCGTCGACCAGATC 58.879 66.667 10.58 0.00 0.00 2.75
365 366 1.753078 CCTCCCGTCGACCAGATCA 60.753 63.158 10.58 0.00 0.00 2.92
366 367 1.320344 CCTCCCGTCGACCAGATCAA 61.320 60.000 10.58 0.00 0.00 2.57
367 368 0.179134 CTCCCGTCGACCAGATCAAC 60.179 60.000 10.58 0.00 0.00 3.18
368 369 1.516386 CCCGTCGACCAGATCAACG 60.516 63.158 10.58 0.00 0.00 4.10
369 370 1.516386 CCGTCGACCAGATCAACGG 60.516 63.158 10.58 0.47 0.00 4.44
370 371 1.504900 CGTCGACCAGATCAACGGA 59.495 57.895 10.58 0.00 0.00 4.69
371 372 0.100682 CGTCGACCAGATCAACGGAT 59.899 55.000 10.58 0.00 36.13 4.18
378 379 2.415843 GATCAACGGATCCGGCGA 59.584 61.111 35.87 29.69 43.44 5.54
379 380 1.661821 GATCAACGGATCCGGCGAG 60.662 63.158 35.87 21.98 43.44 5.03
380 381 2.071844 GATCAACGGATCCGGCGAGA 62.072 60.000 35.87 25.90 43.44 4.04
381 382 1.464376 ATCAACGGATCCGGCGAGAT 61.464 55.000 35.87 26.79 44.69 2.75
382 383 1.661821 CAACGGATCCGGCGAGATC 60.662 63.158 35.87 22.17 44.69 2.75
413 414 2.268920 TGGAGCGCCATCAACCTC 59.731 61.111 4.49 0.00 39.92 3.85
414 415 2.268920 GGAGCGCCATCAACCTCA 59.731 61.111 2.29 0.00 0.00 3.86
415 416 2.109126 GGAGCGCCATCAACCTCAC 61.109 63.158 2.29 0.00 0.00 3.51
416 417 2.045926 AGCGCCATCAACCTCACC 60.046 61.111 2.29 0.00 0.00 4.02
417 418 2.359850 GCGCCATCAACCTCACCA 60.360 61.111 0.00 0.00 0.00 4.17
418 419 1.750399 GCGCCATCAACCTCACCAT 60.750 57.895 0.00 0.00 0.00 3.55
419 420 1.315257 GCGCCATCAACCTCACCATT 61.315 55.000 0.00 0.00 0.00 3.16
420 421 0.452987 CGCCATCAACCTCACCATTG 59.547 55.000 0.00 0.00 0.00 2.82
421 422 1.549203 GCCATCAACCTCACCATTGT 58.451 50.000 0.00 0.00 0.00 2.71
422 423 1.474077 GCCATCAACCTCACCATTGTC 59.526 52.381 0.00 0.00 0.00 3.18
423 424 2.094675 CCATCAACCTCACCATTGTCC 58.905 52.381 0.00 0.00 0.00 4.02
424 425 2.291153 CCATCAACCTCACCATTGTCCT 60.291 50.000 0.00 0.00 0.00 3.85
425 426 3.054434 CCATCAACCTCACCATTGTCCTA 60.054 47.826 0.00 0.00 0.00 2.94
426 427 3.981071 TCAACCTCACCATTGTCCTAG 57.019 47.619 0.00 0.00 0.00 3.02
427 428 2.027192 TCAACCTCACCATTGTCCTAGC 60.027 50.000 0.00 0.00 0.00 3.42
428 429 1.656587 ACCTCACCATTGTCCTAGCA 58.343 50.000 0.00 0.00 0.00 3.49
429 430 1.279271 ACCTCACCATTGTCCTAGCAC 59.721 52.381 0.00 0.00 0.00 4.40
430 431 1.407437 CCTCACCATTGTCCTAGCACC 60.407 57.143 0.00 0.00 0.00 5.01
431 432 1.278985 CTCACCATTGTCCTAGCACCA 59.721 52.381 0.00 0.00 0.00 4.17
432 433 1.003118 TCACCATTGTCCTAGCACCAC 59.997 52.381 0.00 0.00 0.00 4.16
433 434 0.328258 ACCATTGTCCTAGCACCACC 59.672 55.000 0.00 0.00 0.00 4.61
434 435 0.327924 CCATTGTCCTAGCACCACCA 59.672 55.000 0.00 0.00 0.00 4.17
435 436 1.679944 CCATTGTCCTAGCACCACCAG 60.680 57.143 0.00 0.00 0.00 4.00
436 437 0.035056 ATTGTCCTAGCACCACCAGC 60.035 55.000 0.00 0.00 0.00 4.85
437 438 2.125512 GTCCTAGCACCACCAGCG 60.126 66.667 0.00 0.00 37.01 5.18
438 439 4.082523 TCCTAGCACCACCAGCGC 62.083 66.667 0.00 0.00 37.01 5.92
439 440 4.087892 CCTAGCACCACCAGCGCT 62.088 66.667 2.64 2.64 39.80 5.92
440 441 2.721167 CCTAGCACCACCAGCGCTA 61.721 63.158 10.99 0.00 37.20 4.26
441 442 1.227089 CTAGCACCACCAGCGCTAG 60.227 63.158 10.99 5.02 46.57 3.42
442 443 3.371097 TAGCACCACCAGCGCTAGC 62.371 63.158 10.99 4.06 45.58 3.42
453 454 2.513204 CGCTAGCAGCAGCCACAT 60.513 61.111 16.45 0.00 42.58 3.21
454 455 2.532256 CGCTAGCAGCAGCCACATC 61.532 63.158 16.45 0.00 42.58 3.06
455 456 1.450848 GCTAGCAGCAGCCACATCA 60.451 57.895 10.63 0.00 41.89 3.07
456 457 0.818445 GCTAGCAGCAGCCACATCAT 60.818 55.000 10.63 0.00 41.89 2.45
457 458 1.541889 GCTAGCAGCAGCCACATCATA 60.542 52.381 10.63 0.00 41.89 2.15
458 459 2.842457 CTAGCAGCAGCCACATCATAA 58.158 47.619 0.00 0.00 43.56 1.90
459 460 1.386533 AGCAGCAGCCACATCATAAC 58.613 50.000 0.00 0.00 43.56 1.89
460 461 0.028505 GCAGCAGCCACATCATAACG 59.971 55.000 0.00 0.00 33.58 3.18
461 462 0.028505 CAGCAGCCACATCATAACGC 59.971 55.000 0.00 0.00 0.00 4.84
462 463 1.097547 AGCAGCCACATCATAACGCC 61.098 55.000 0.00 0.00 0.00 5.68
463 464 1.643292 CAGCCACATCATAACGCCG 59.357 57.895 0.00 0.00 0.00 6.46
464 465 1.089481 CAGCCACATCATAACGCCGT 61.089 55.000 0.00 0.00 0.00 5.68
465 466 0.462375 AGCCACATCATAACGCCGTA 59.538 50.000 0.00 0.00 0.00 4.02
466 467 0.580104 GCCACATCATAACGCCGTAC 59.420 55.000 0.00 0.00 0.00 3.67
483 484 2.732016 CGTCCACGTCCACTCCAA 59.268 61.111 0.00 0.00 34.11 3.53
484 485 1.372997 CGTCCACGTCCACTCCAAG 60.373 63.158 0.00 0.00 34.11 3.61
485 486 1.746517 GTCCACGTCCACTCCAAGT 59.253 57.895 0.00 0.00 0.00 3.16
486 487 0.106149 GTCCACGTCCACTCCAAGTT 59.894 55.000 0.00 0.00 0.00 2.66
487 488 1.342174 GTCCACGTCCACTCCAAGTTA 59.658 52.381 0.00 0.00 0.00 2.24
488 489 1.342174 TCCACGTCCACTCCAAGTTAC 59.658 52.381 0.00 0.00 0.00 2.50
489 490 1.415374 CACGTCCACTCCAAGTTACG 58.585 55.000 9.14 9.14 39.53 3.18
490 491 0.316204 ACGTCCACTCCAAGTTACGG 59.684 55.000 13.27 0.00 38.57 4.02
491 492 0.599558 CGTCCACTCCAAGTTACGGA 59.400 55.000 0.00 0.00 33.69 4.69
492 493 1.000060 CGTCCACTCCAAGTTACGGAA 60.000 52.381 0.00 0.00 33.69 4.30
493 494 2.546373 CGTCCACTCCAAGTTACGGAAA 60.546 50.000 0.00 0.00 33.69 3.13
494 495 3.469739 GTCCACTCCAAGTTACGGAAAA 58.530 45.455 0.00 0.00 30.33 2.29
495 496 4.070009 GTCCACTCCAAGTTACGGAAAAT 58.930 43.478 0.00 0.00 30.33 1.82
496 497 4.517832 GTCCACTCCAAGTTACGGAAAATT 59.482 41.667 0.00 0.00 30.33 1.82
497 498 5.702209 GTCCACTCCAAGTTACGGAAAATTA 59.298 40.000 0.00 0.00 30.33 1.40
498 499 5.935789 TCCACTCCAAGTTACGGAAAATTAG 59.064 40.000 0.00 0.00 30.33 1.73
499 500 5.935789 CCACTCCAAGTTACGGAAAATTAGA 59.064 40.000 0.00 0.00 30.33 2.10
500 501 6.128363 CCACTCCAAGTTACGGAAAATTAGAC 60.128 42.308 0.00 0.00 30.33 2.59
501 502 6.425721 CACTCCAAGTTACGGAAAATTAGACA 59.574 38.462 0.00 0.00 30.33 3.41
502 503 6.426025 ACTCCAAGTTACGGAAAATTAGACAC 59.574 38.462 0.00 0.00 30.33 3.67
503 504 5.406175 TCCAAGTTACGGAAAATTAGACACG 59.594 40.000 0.00 0.00 0.00 4.49
504 505 5.390145 CCAAGTTACGGAAAATTAGACACGG 60.390 44.000 0.00 0.00 0.00 4.94
505 506 3.681417 AGTTACGGAAAATTAGACACGGC 59.319 43.478 0.00 0.00 0.00 5.68
506 507 1.073177 ACGGAAAATTAGACACGGCG 58.927 50.000 4.80 4.80 0.00 6.46
507 508 0.372334 CGGAAAATTAGACACGGCGG 59.628 55.000 13.24 2.35 0.00 6.13
508 509 0.730840 GGAAAATTAGACACGGCGGG 59.269 55.000 8.04 8.04 0.00 6.13
509 510 0.730840 GAAAATTAGACACGGCGGGG 59.269 55.000 16.11 6.70 0.00 5.73
510 511 0.325602 AAAATTAGACACGGCGGGGA 59.674 50.000 16.11 0.00 0.00 4.81
511 512 0.107848 AAATTAGACACGGCGGGGAG 60.108 55.000 16.11 1.22 0.00 4.30
512 513 0.974010 AATTAGACACGGCGGGGAGA 60.974 55.000 16.11 0.00 0.00 3.71
513 514 0.759436 ATTAGACACGGCGGGGAGAT 60.759 55.000 16.11 0.00 0.00 2.75
514 515 0.974010 TTAGACACGGCGGGGAGATT 60.974 55.000 16.11 0.00 0.00 2.40
515 516 0.974010 TAGACACGGCGGGGAGATTT 60.974 55.000 16.11 0.00 0.00 2.17
516 517 1.376812 GACACGGCGGGGAGATTTT 60.377 57.895 16.11 0.00 0.00 1.82
517 518 0.958876 GACACGGCGGGGAGATTTTT 60.959 55.000 16.11 0.00 0.00 1.94
538 539 5.613358 TTTTCAATTTTTGCAACAACGGT 57.387 30.435 0.00 0.00 0.00 4.83
539 540 4.849111 TTCAATTTTTGCAACAACGGTC 57.151 36.364 0.00 0.00 0.00 4.79
540 541 4.116747 TCAATTTTTGCAACAACGGTCT 57.883 36.364 0.00 0.00 0.00 3.85
541 542 4.499183 TCAATTTTTGCAACAACGGTCTT 58.501 34.783 0.00 0.00 0.00 3.01
542 543 4.328440 TCAATTTTTGCAACAACGGTCTTG 59.672 37.500 0.00 0.33 0.00 3.02
543 544 3.305398 TTTTTGCAACAACGGTCTTGT 57.695 38.095 0.00 0.00 0.00 3.16
544 545 3.305398 TTTTGCAACAACGGTCTTGTT 57.695 38.095 0.00 0.00 42.75 2.83
551 552 2.842208 CAACGGTCTTGTTGCAGAAA 57.158 45.000 0.00 0.00 42.34 2.52
552 553 3.143807 CAACGGTCTTGTTGCAGAAAA 57.856 42.857 0.00 0.00 42.34 2.29
553 554 3.705604 CAACGGTCTTGTTGCAGAAAAT 58.294 40.909 0.00 0.00 42.34 1.82
554 555 4.111916 CAACGGTCTTGTTGCAGAAAATT 58.888 39.130 0.00 0.00 42.34 1.82
555 556 5.277825 CAACGGTCTTGTTGCAGAAAATTA 58.722 37.500 0.00 0.00 42.34 1.40
556 557 5.108385 ACGGTCTTGTTGCAGAAAATTAG 57.892 39.130 0.00 0.00 0.00 1.73
557 558 4.819630 ACGGTCTTGTTGCAGAAAATTAGA 59.180 37.500 0.00 0.00 0.00 2.10
558 559 5.049405 ACGGTCTTGTTGCAGAAAATTAGAG 60.049 40.000 0.00 0.00 0.00 2.43
559 560 5.179368 CGGTCTTGTTGCAGAAAATTAGAGA 59.821 40.000 0.00 0.00 0.00 3.10
560 561 6.293407 CGGTCTTGTTGCAGAAAATTAGAGAA 60.293 38.462 0.00 0.00 0.00 2.87
561 562 7.573843 CGGTCTTGTTGCAGAAAATTAGAGAAT 60.574 37.037 0.00 0.00 0.00 2.40
562 563 8.730680 GGTCTTGTTGCAGAAAATTAGAGAATA 58.269 33.333 0.00 0.00 0.00 1.75
567 568 9.725019 TGTTGCAGAAAATTAGAGAATAAGAGA 57.275 29.630 0.00 0.00 0.00 3.10
569 570 9.950496 TTGCAGAAAATTAGAGAATAAGAGAGT 57.050 29.630 0.00 0.00 0.00 3.24
570 571 9.950496 TGCAGAAAATTAGAGAATAAGAGAGTT 57.050 29.630 0.00 0.00 0.00 3.01
577 578 9.507329 AATTAGAGAATAAGAGAGTTTGCAACA 57.493 29.630 0.00 0.00 0.00 3.33
578 579 8.539770 TTAGAGAATAAGAGAGTTTGCAACAG 57.460 34.615 0.00 0.00 0.00 3.16
579 580 5.936956 AGAGAATAAGAGAGTTTGCAACAGG 59.063 40.000 0.00 0.00 0.00 4.00
580 581 5.006386 AGAATAAGAGAGTTTGCAACAGGG 58.994 41.667 0.00 0.00 0.00 4.45
581 582 1.986882 AAGAGAGTTTGCAACAGGGG 58.013 50.000 0.00 0.00 0.00 4.79
582 583 1.140312 AGAGAGTTTGCAACAGGGGA 58.860 50.000 0.00 0.00 0.00 4.81
583 584 1.202818 AGAGAGTTTGCAACAGGGGAC 60.203 52.381 0.00 0.00 0.00 4.46
584 585 0.846693 AGAGTTTGCAACAGGGGACT 59.153 50.000 0.00 0.00 46.44 3.85
585 586 1.215423 AGAGTTTGCAACAGGGGACTT 59.785 47.619 0.00 0.00 40.21 3.01
586 587 1.338020 GAGTTTGCAACAGGGGACTTG 59.662 52.381 0.00 0.00 40.21 3.16
587 588 1.111277 GTTTGCAACAGGGGACTTGT 58.889 50.000 0.00 0.00 40.21 3.16
588 589 1.480545 GTTTGCAACAGGGGACTTGTT 59.519 47.619 0.00 0.00 40.21 2.83
589 590 1.110442 TTGCAACAGGGGACTTGTTG 58.890 50.000 16.77 16.77 44.80 3.33
591 592 2.805897 CAACAGGGGACTTGTTGCA 58.194 52.632 10.56 0.00 40.19 4.08
592 593 1.110442 CAACAGGGGACTTGTTGCAA 58.890 50.000 10.56 0.00 40.19 4.08
593 594 1.480137 CAACAGGGGACTTGTTGCAAA 59.520 47.619 0.00 0.00 40.19 3.68
594 595 1.859302 ACAGGGGACTTGTTGCAAAA 58.141 45.000 0.00 0.00 40.21 2.44
595 596 2.183679 ACAGGGGACTTGTTGCAAAAA 58.816 42.857 0.00 0.00 40.21 1.94
633 634 9.628746 TGAGATTTCACAATTAATGTCATGTTG 57.371 29.630 0.00 0.00 41.46 3.33
634 635 8.470040 AGATTTCACAATTAATGTCATGTTGC 57.530 30.769 0.00 0.00 41.46 4.17
635 636 8.089597 AGATTTCACAATTAATGTCATGTTGCA 58.910 29.630 0.00 0.00 41.46 4.08
636 637 7.640616 TTTCACAATTAATGTCATGTTGCAG 57.359 32.000 0.00 1.69 41.46 4.41
637 638 5.712004 TCACAATTAATGTCATGTTGCAGG 58.288 37.500 0.00 0.00 41.46 4.85
638 639 5.476254 TCACAATTAATGTCATGTTGCAGGA 59.524 36.000 0.00 0.00 41.46 3.86
639 640 6.015603 TCACAATTAATGTCATGTTGCAGGAA 60.016 34.615 0.00 0.00 41.46 3.36
640 641 6.645827 CACAATTAATGTCATGTTGCAGGAAA 59.354 34.615 0.00 0.00 41.46 3.13
641 642 7.332430 CACAATTAATGTCATGTTGCAGGAAAT 59.668 33.333 0.00 0.00 41.46 2.17
642 643 7.879160 ACAATTAATGTCATGTTGCAGGAAATT 59.121 29.630 4.87 4.87 37.96 1.82
643 644 9.368674 CAATTAATGTCATGTTGCAGGAAATTA 57.631 29.630 3.24 3.24 34.55 1.40
644 645 9.590451 AATTAATGTCATGTTGCAGGAAATTAG 57.410 29.630 6.53 0.00 36.28 1.73
645 646 6.839124 AATGTCATGTTGCAGGAAATTAGA 57.161 33.333 0.00 0.00 31.51 2.10
646 647 5.885230 TGTCATGTTGCAGGAAATTAGAG 57.115 39.130 0.00 0.00 0.00 2.43
647 648 5.559770 TGTCATGTTGCAGGAAATTAGAGA 58.440 37.500 0.00 0.00 0.00 3.10
648 649 6.003326 TGTCATGTTGCAGGAAATTAGAGAA 58.997 36.000 0.00 0.00 0.00 2.87
649 650 6.149973 TGTCATGTTGCAGGAAATTAGAGAAG 59.850 38.462 0.00 0.00 0.00 2.85
650 651 6.372659 GTCATGTTGCAGGAAATTAGAGAAGA 59.627 38.462 0.00 0.00 0.00 2.87
651 652 6.596888 TCATGTTGCAGGAAATTAGAGAAGAG 59.403 38.462 0.00 0.00 0.00 2.85
652 653 5.248640 TGTTGCAGGAAATTAGAGAAGAGG 58.751 41.667 0.00 0.00 0.00 3.69
653 654 5.013079 TGTTGCAGGAAATTAGAGAAGAGGA 59.987 40.000 0.00 0.00 0.00 3.71
654 655 5.350504 TGCAGGAAATTAGAGAAGAGGAG 57.649 43.478 0.00 0.00 0.00 3.69
655 656 4.163078 TGCAGGAAATTAGAGAAGAGGAGG 59.837 45.833 0.00 0.00 0.00 4.30
656 657 4.163268 GCAGGAAATTAGAGAAGAGGAGGT 59.837 45.833 0.00 0.00 0.00 3.85
657 658 5.338789 GCAGGAAATTAGAGAAGAGGAGGTT 60.339 44.000 0.00 0.00 0.00 3.50
658 659 6.716284 CAGGAAATTAGAGAAGAGGAGGTTT 58.284 40.000 0.00 0.00 0.00 3.27
659 660 6.821160 CAGGAAATTAGAGAAGAGGAGGTTTC 59.179 42.308 0.00 0.00 0.00 2.78
660 661 5.813157 GGAAATTAGAGAAGAGGAGGTTTCG 59.187 44.000 0.00 0.00 0.00 3.46
661 662 3.870633 TTAGAGAAGAGGAGGTTTCGC 57.129 47.619 0.00 0.00 0.00 4.70
662 663 1.633774 AGAGAAGAGGAGGTTTCGCA 58.366 50.000 0.00 0.00 0.00 5.10
663 664 1.971357 AGAGAAGAGGAGGTTTCGCAA 59.029 47.619 0.00 0.00 0.00 4.85
664 665 2.070028 GAGAAGAGGAGGTTTCGCAAC 58.930 52.381 0.00 0.00 0.00 4.17
665 666 1.416401 AGAAGAGGAGGTTTCGCAACA 59.584 47.619 0.00 0.00 34.15 3.33
666 667 2.158813 AGAAGAGGAGGTTTCGCAACAA 60.159 45.455 0.00 0.00 34.15 2.83
667 668 2.341846 AGAGGAGGTTTCGCAACAAA 57.658 45.000 0.00 0.00 34.15 2.83
668 669 2.650322 AGAGGAGGTTTCGCAACAAAA 58.350 42.857 0.00 0.00 34.15 2.44
669 670 2.618709 AGAGGAGGTTTCGCAACAAAAG 59.381 45.455 0.00 0.00 34.15 2.27
670 671 2.357952 GAGGAGGTTTCGCAACAAAAGT 59.642 45.455 0.00 0.00 34.15 2.66
671 672 2.758423 AGGAGGTTTCGCAACAAAAGTT 59.242 40.909 0.00 0.00 34.15 2.66
672 673 3.194755 AGGAGGTTTCGCAACAAAAGTTT 59.805 39.130 0.00 0.00 34.15 2.66
673 674 3.930229 GGAGGTTTCGCAACAAAAGTTTT 59.070 39.130 0.00 0.00 34.15 2.43
674 675 4.201676 GGAGGTTTCGCAACAAAAGTTTTG 60.202 41.667 23.65 23.65 34.15 2.44
675 676 4.311606 AGGTTTCGCAACAAAAGTTTTGT 58.688 34.783 24.92 24.92 34.15 2.83
676 677 4.752604 AGGTTTCGCAACAAAAGTTTTGTT 59.247 33.333 31.63 31.63 42.75 2.83
694 695 9.651913 AGTTTTGTTGCAGAAAATTAAAGAAGA 57.348 25.926 8.47 0.00 0.00 2.87
695 696 9.906111 GTTTTGTTGCAGAAAATTAAAGAAGAG 57.094 29.630 8.47 0.00 0.00 2.85
696 697 9.868277 TTTTGTTGCAGAAAATTAAAGAAGAGA 57.132 25.926 2.46 0.00 0.00 3.10
697 698 9.868277 TTTGTTGCAGAAAATTAAAGAAGAGAA 57.132 25.926 0.00 0.00 0.00 2.87
698 699 9.868277 TTGTTGCAGAAAATTAAAGAAGAGAAA 57.132 25.926 0.00 0.00 0.00 2.52
699 700 9.520204 TGTTGCAGAAAATTAAAGAAGAGAAAG 57.480 29.630 0.00 0.00 0.00 2.62
700 701 9.521503 GTTGCAGAAAATTAAAGAAGAGAAAGT 57.478 29.630 0.00 0.00 0.00 2.66
701 702 9.520204 TTGCAGAAAATTAAAGAAGAGAAAGTG 57.480 29.630 0.00 0.00 0.00 3.16
702 703 8.902806 TGCAGAAAATTAAAGAAGAGAAAGTGA 58.097 29.630 0.00 0.00 0.00 3.41
703 704 9.175060 GCAGAAAATTAAAGAAGAGAAAGTGAC 57.825 33.333 0.00 0.00 0.00 3.67
706 707 9.175060 GAAAATTAAAGAAGAGAAAGTGACTGC 57.825 33.333 0.00 0.00 0.00 4.40
707 708 8.457238 AAATTAAAGAAGAGAAAGTGACTGCT 57.543 30.769 0.00 0.00 0.00 4.24
708 709 6.851222 TTAAAGAAGAGAAAGTGACTGCTG 57.149 37.500 0.00 0.00 0.00 4.41
709 710 3.399440 AGAAGAGAAAGTGACTGCTGG 57.601 47.619 0.00 0.00 0.00 4.85
710 711 1.803555 GAAGAGAAAGTGACTGCTGGC 59.196 52.381 0.00 0.00 0.00 4.85
711 712 0.320247 AGAGAAAGTGACTGCTGGCG 60.320 55.000 0.00 0.00 0.00 5.69
712 713 0.601311 GAGAAAGTGACTGCTGGCGT 60.601 55.000 0.00 0.00 0.00 5.68
713 714 0.601311 AGAAAGTGACTGCTGGCGTC 60.601 55.000 0.00 9.37 0.00 5.19
714 715 1.891060 GAAAGTGACTGCTGGCGTCG 61.891 60.000 0.00 0.00 34.17 5.12
715 716 2.644555 AAAGTGACTGCTGGCGTCGT 62.645 55.000 0.00 0.00 34.17 4.34
716 717 3.406361 GTGACTGCTGGCGTCGTG 61.406 66.667 0.00 0.00 34.17 4.35
717 718 4.662961 TGACTGCTGGCGTCGTGG 62.663 66.667 0.00 0.00 34.17 4.94
718 719 4.357947 GACTGCTGGCGTCGTGGA 62.358 66.667 0.00 0.00 0.00 4.02
719 720 3.858868 GACTGCTGGCGTCGTGGAA 62.859 63.158 0.00 0.00 0.00 3.53
720 721 3.414700 CTGCTGGCGTCGTGGAAC 61.415 66.667 0.00 0.00 0.00 3.62
721 722 4.228567 TGCTGGCGTCGTGGAACA 62.229 61.111 0.00 0.00 35.74 3.18
722 723 3.414700 GCTGGCGTCGTGGAACAG 61.415 66.667 0.00 0.00 41.80 3.16
723 724 3.414700 CTGGCGTCGTGGAACAGC 61.415 66.667 0.00 0.00 41.80 4.40
726 727 2.809601 GCGTCGTGGAACAGCGAT 60.810 61.111 0.00 0.00 41.80 4.58
727 728 2.380410 GCGTCGTGGAACAGCGATT 61.380 57.895 0.00 0.00 41.80 3.34
728 729 1.416049 CGTCGTGGAACAGCGATTG 59.584 57.895 0.00 0.00 41.80 2.67
729 730 1.006825 CGTCGTGGAACAGCGATTGA 61.007 55.000 0.00 0.00 41.80 2.57
730 731 1.144969 GTCGTGGAACAGCGATTGAA 58.855 50.000 0.00 0.00 41.80 2.69
731 732 1.529438 GTCGTGGAACAGCGATTGAAA 59.471 47.619 0.00 0.00 41.80 2.69
732 733 1.798223 TCGTGGAACAGCGATTGAAAG 59.202 47.619 0.00 0.00 41.80 2.62
733 734 1.531149 CGTGGAACAGCGATTGAAAGT 59.469 47.619 0.00 0.00 41.80 2.66
734 735 2.032030 CGTGGAACAGCGATTGAAAGTT 60.032 45.455 0.00 0.00 41.80 2.66
735 736 3.548014 CGTGGAACAGCGATTGAAAGTTT 60.548 43.478 0.00 0.00 41.80 2.66
736 737 4.359706 GTGGAACAGCGATTGAAAGTTTT 58.640 39.130 0.00 0.00 41.80 2.43
737 738 4.803613 GTGGAACAGCGATTGAAAGTTTTT 59.196 37.500 0.00 0.00 41.80 1.94
738 739 5.040635 TGGAACAGCGATTGAAAGTTTTTC 58.959 37.500 0.00 0.00 0.00 2.29
739 740 4.146443 GGAACAGCGATTGAAAGTTTTTCG 59.854 41.667 10.44 10.44 0.00 3.46
740 741 4.545823 ACAGCGATTGAAAGTTTTTCGA 57.454 36.364 16.10 0.00 31.74 3.71
741 742 4.915704 ACAGCGATTGAAAGTTTTTCGAA 58.084 34.783 16.10 0.00 31.74 3.71
742 743 4.733405 ACAGCGATTGAAAGTTTTTCGAAC 59.267 37.500 16.10 0.00 31.74 3.95
743 744 4.732923 CAGCGATTGAAAGTTTTTCGAACA 59.267 37.500 16.10 0.00 31.74 3.18
744 745 5.229052 CAGCGATTGAAAGTTTTTCGAACAA 59.771 36.000 16.10 0.00 31.74 2.83
745 746 5.229260 AGCGATTGAAAGTTTTTCGAACAAC 59.771 36.000 17.40 17.40 31.74 3.32
746 747 5.003967 GCGATTGAAAGTTTTTCGAACAACA 59.996 36.000 24.64 8.00 31.74 3.33
747 748 6.618198 CGATTGAAAGTTTTTCGAACAACAG 58.382 36.000 24.64 7.09 31.74 3.16
748 749 6.291060 CGATTGAAAGTTTTTCGAACAACAGG 60.291 38.462 24.64 5.19 31.74 4.00
749 750 5.379732 TGAAAGTTTTTCGAACAACAGGT 57.620 34.783 24.64 11.95 0.00 4.00
750 751 5.395642 TGAAAGTTTTTCGAACAACAGGTC 58.604 37.500 24.64 18.42 0.00 3.85
751 752 5.182380 TGAAAGTTTTTCGAACAACAGGTCT 59.818 36.000 24.64 5.24 0.00 3.85
752 753 4.616181 AGTTTTTCGAACAACAGGTCTG 57.384 40.909 24.64 0.00 0.00 3.51
753 754 3.377172 AGTTTTTCGAACAACAGGTCTGG 59.623 43.478 24.64 0.00 34.19 3.86
754 755 1.305201 TTTCGAACAACAGGTCTGGC 58.695 50.000 0.00 0.00 34.19 4.85
755 756 0.534203 TTCGAACAACAGGTCTGGCC 60.534 55.000 0.00 0.00 37.58 5.36
757 758 0.951040 CGAACAACAGGTCTGGCCTC 60.951 60.000 3.32 0.00 46.96 4.70
758 759 0.951040 GAACAACAGGTCTGGCCTCG 60.951 60.000 3.32 0.00 46.96 4.63
759 760 2.743928 CAACAGGTCTGGCCTCGC 60.744 66.667 3.32 0.00 46.96 5.03
760 761 2.925170 AACAGGTCTGGCCTCGCT 60.925 61.111 3.32 0.00 46.96 4.93
761 762 3.245668 AACAGGTCTGGCCTCGCTG 62.246 63.158 3.32 7.10 46.96 5.18
762 763 3.699894 CAGGTCTGGCCTCGCTGT 61.700 66.667 3.32 0.00 46.96 4.40
763 764 2.925170 AGGTCTGGCCTCGCTGTT 60.925 61.111 3.32 0.00 46.96 3.16
764 765 2.435059 GGTCTGGCCTCGCTGTTC 60.435 66.667 3.32 0.00 0.00 3.18
765 766 2.435059 GTCTGGCCTCGCTGTTCC 60.435 66.667 3.32 0.00 0.00 3.62
766 767 4.069232 TCTGGCCTCGCTGTTCCG 62.069 66.667 3.32 0.00 0.00 4.30
767 768 4.379243 CTGGCCTCGCTGTTCCGT 62.379 66.667 3.32 0.00 0.00 4.69
768 769 4.373116 TGGCCTCGCTGTTCCGTC 62.373 66.667 3.32 0.00 0.00 4.79
771 772 4.052229 CCTCGCTGTTCCGTCCGT 62.052 66.667 0.00 0.00 0.00 4.69
772 773 2.049433 CTCGCTGTTCCGTCCGTT 60.049 61.111 0.00 0.00 0.00 4.44
773 774 1.663702 CTCGCTGTTCCGTCCGTTT 60.664 57.895 0.00 0.00 0.00 3.60
774 775 1.219522 CTCGCTGTTCCGTCCGTTTT 61.220 55.000 0.00 0.00 0.00 2.43
775 776 0.810823 TCGCTGTTCCGTCCGTTTTT 60.811 50.000 0.00 0.00 0.00 1.94
795 796 3.985019 TTTAGTATTGGGCGGAACTCA 57.015 42.857 0.00 0.00 0.00 3.41
868 890 4.980805 TGACGCCGCCCAACTGTC 62.981 66.667 0.00 0.00 0.00 3.51
874 898 1.305930 GCCGCCCAACTGTCTTTAGG 61.306 60.000 0.00 0.00 0.00 2.69
881 905 2.637872 CCAACTGTCTTTAGGTGAGGGA 59.362 50.000 0.00 0.00 37.59 4.20
908 932 2.716217 CCCAACTAAGCAGGGAAAGAG 58.284 52.381 0.00 0.00 45.80 2.85
1051 1100 2.443016 CGGAGGACAGGGGGAGAG 60.443 72.222 0.00 0.00 0.00 3.20
1053 1102 1.382009 GGAGGACAGGGGGAGAGTC 60.382 68.421 0.00 0.00 0.00 3.36
1076 1125 2.190488 CTGGTGGACCTCCTGGAAGC 62.190 65.000 13.67 0.00 36.82 3.86
1081 1130 1.274703 GGACCTCCTGGAAGCCATCA 61.275 60.000 0.00 0.00 37.04 3.07
1089 1138 0.250234 TGGAAGCCATCAGAACCTCG 59.750 55.000 0.00 0.00 0.00 4.63
1109 1158 1.003112 AGGTGCGTCGTCTCTCTCT 60.003 57.895 0.00 0.00 0.00 3.10
1122 1171 3.288308 CTCTCTGCCCAACGCGTCT 62.288 63.158 14.44 0.00 42.08 4.18
1123 1172 2.811317 CTCTGCCCAACGCGTCTC 60.811 66.667 14.44 2.34 42.08 3.36
1124 1173 3.288308 CTCTGCCCAACGCGTCTCT 62.288 63.158 14.44 0.00 42.08 3.10
1125 1174 2.357517 CTGCCCAACGCGTCTCTT 60.358 61.111 14.44 0.00 42.08 2.85
1126 1175 1.961277 CTGCCCAACGCGTCTCTTT 60.961 57.895 14.44 0.00 42.08 2.52
1127 1176 1.901650 CTGCCCAACGCGTCTCTTTC 61.902 60.000 14.44 0.34 42.08 2.62
1128 1177 3.011760 GCCCAACGCGTCTCTTTCG 62.012 63.158 14.44 0.00 0.00 3.46
1129 1178 1.663702 CCCAACGCGTCTCTTTCGT 60.664 57.895 14.44 0.00 38.15 3.85
1130 1179 1.615107 CCCAACGCGTCTCTTTCGTC 61.615 60.000 14.44 0.00 35.18 4.20
1131 1180 1.407329 CAACGCGTCTCTTTCGTCG 59.593 57.895 14.44 0.00 35.18 5.12
1132 1181 0.995234 CAACGCGTCTCTTTCGTCGA 60.995 55.000 14.44 0.00 35.18 4.20
1133 1182 0.995731 AACGCGTCTCTTTCGTCGAC 60.996 55.000 14.44 5.18 35.18 4.20
1134 1183 2.144680 CGCGTCTCTTTCGTCGACC 61.145 63.158 10.58 0.00 32.91 4.79
1233 1282 3.634702 TTGGTATGCGTGCGAGCGA 62.635 57.895 3.30 0.00 40.67 4.93
1277 1326 2.579684 ATTGGAGTCTCGGAAGCGGC 62.580 60.000 0.00 0.00 0.00 6.53
1283 1334 1.079317 GTCTCGGAAGCGGCTTCTTC 61.079 60.000 34.09 21.42 40.07 2.87
1293 1344 1.090052 CGGCTTCTTCGGTGGGATTC 61.090 60.000 0.00 0.00 0.00 2.52
1298 1349 1.559368 TCTTCGGTGGGATTCGGTAA 58.441 50.000 0.00 0.00 0.00 2.85
1563 1614 4.527816 TGTGAGGCCAGCAATTTATTTTCT 59.472 37.500 5.01 0.00 0.00 2.52
1608 1672 6.127619 GCAATTAGAGGCTAAAGTTTGATGGT 60.128 38.462 0.00 0.00 0.00 3.55
1752 1833 4.641989 CCTCACTGTATCCTTTTCCCATTG 59.358 45.833 0.00 0.00 0.00 2.82
1856 1937 2.077627 TGTTACTGTTGTTGCGTGTGT 58.922 42.857 0.00 0.00 0.00 3.72
1889 1970 2.620585 GCACTTTAGGCATCTTGGGATC 59.379 50.000 0.00 0.00 0.00 3.36
2016 2097 0.320697 ACTCTCGGTGCAAAGGTACC 59.679 55.000 2.73 2.73 45.39 3.34
2063 2149 3.244526 TGCTTCACTTCATCTGCCAACTA 60.245 43.478 0.00 0.00 0.00 2.24
2084 2173 8.602328 CAACTATATATAGCTGCAAATCTGCTC 58.398 37.037 18.00 0.00 45.28 4.26
2361 2451 4.706962 AGCCTAAAATGCCCAAAGTTCTAG 59.293 41.667 0.00 0.00 0.00 2.43
2386 2476 1.278985 TGTATCCTGCCTTCTGTGTGG 59.721 52.381 0.00 0.00 0.00 4.17
2389 2479 1.656587 TCCTGCCTTCTGTGTGGTAT 58.343 50.000 0.00 0.00 0.00 2.73
2390 2480 1.555075 TCCTGCCTTCTGTGTGGTATC 59.445 52.381 0.00 0.00 0.00 2.24
2391 2481 1.278985 CCTGCCTTCTGTGTGGTATCA 59.721 52.381 0.00 0.00 0.00 2.15
2392 2482 2.350522 CTGCCTTCTGTGTGGTATCAC 58.649 52.381 0.00 0.00 43.87 3.06
2393 2483 1.977854 TGCCTTCTGTGTGGTATCACT 59.022 47.619 7.81 0.00 43.94 3.41
2394 2484 3.169908 TGCCTTCTGTGTGGTATCACTA 58.830 45.455 7.81 0.00 43.94 2.74
2395 2485 3.580895 TGCCTTCTGTGTGGTATCACTAA 59.419 43.478 7.81 0.00 43.94 2.24
2396 2486 4.225042 TGCCTTCTGTGTGGTATCACTAAT 59.775 41.667 7.81 0.00 43.94 1.73
2464 2558 4.730949 ATATGCATAAATCATGGGCAGC 57.269 40.909 11.13 0.00 37.96 5.25
2465 2559 1.777941 TGCATAAATCATGGGCAGCA 58.222 45.000 0.00 0.00 34.97 4.41
2668 3068 8.732746 AGTACCATTACATCCAGTTTAATCAC 57.267 34.615 0.00 0.00 0.00 3.06
2731 3131 8.169977 TCAACTTCTTGACTGCAGATAATTTT 57.830 30.769 23.35 0.00 31.00 1.82
2915 3315 5.617528 TCAACTGGTTTAACTACACAGGA 57.382 39.130 0.00 0.00 33.63 3.86
2972 3372 7.955918 ACTTTTCTGAGGCATAAATCACTTTT 58.044 30.769 0.00 0.00 0.00 2.27
3242 4034 5.347635 GGAATTGCATCCTTAAAACGGAAAC 59.652 40.000 0.00 0.00 36.50 2.78
3269 4061 9.678260 ATTTCCATAGCCTTGACTAATCATATC 57.322 33.333 0.00 0.00 33.85 1.63
3311 4293 8.919661 GTGATTTTGATTTTTCTGACTTGGATC 58.080 33.333 0.00 0.00 0.00 3.36
3328 4310 2.212652 GATCATACGCAGTGGCAATGA 58.787 47.619 20.42 9.47 45.73 2.57
4154 5136 2.409948 AGCTAATGGTCCAGCTCAAC 57.590 50.000 0.00 0.00 44.83 3.18
4199 5181 6.213195 AGAGATAAATTTGGTTTCATTGGGCA 59.787 34.615 0.00 0.00 0.00 5.36
4502 5484 1.021968 TATGATTGCTGCTGCTGCTG 58.978 50.000 27.67 16.73 40.48 4.41
4922 5904 8.696410 TGTAAACCAATTGTTCACTTCTTTTC 57.304 30.769 4.43 0.00 35.67 2.29
4984 5966 5.356882 TTGATTTGCCAACTTCTAGTTCG 57.643 39.130 0.00 0.00 36.03 3.95
5105 6087 9.598517 TGATTTTATGCTCTTGTTTCTTTTTGT 57.401 25.926 0.00 0.00 0.00 2.83
5276 6258 2.422479 CTCAAACATGAGGCATCTGTGG 59.578 50.000 0.00 0.00 32.56 4.17
5537 6519 2.359975 GGCTACTTTGCTGCCCGT 60.360 61.111 0.00 0.00 40.71 5.28
5969 6951 1.807573 CCTCGAGAGCGCAGTTTCC 60.808 63.158 15.71 0.00 37.46 3.13
6068 7051 2.236893 CCTTGCTGCCCCATGTAAATTT 59.763 45.455 0.00 0.00 0.00 1.82
6077 7060 5.221925 TGCCCCATGTAAATTTTTAAGGCAA 60.222 36.000 13.58 2.78 43.27 4.52
6141 7124 1.467342 GGTGTCCTGTTAATTCGTGGC 59.533 52.381 0.00 0.00 0.00 5.01
6310 7293 2.678336 GGATGAAGTGAATGTTCCGTCC 59.322 50.000 0.00 0.00 0.00 4.79
6457 7440 0.676151 GCCTTCAGGAGCAAGACAGG 60.676 60.000 0.00 0.00 37.39 4.00
6529 7512 4.772624 TCTAACCATCAGTCACTAGCAGTT 59.227 41.667 0.00 0.00 0.00 3.16
6530 7513 5.949952 TCTAACCATCAGTCACTAGCAGTTA 59.050 40.000 0.00 0.00 0.00 2.24
6531 7514 4.457834 ACCATCAGTCACTAGCAGTTAC 57.542 45.455 0.00 0.00 0.00 2.50
6532 7515 4.090090 ACCATCAGTCACTAGCAGTTACT 58.910 43.478 0.00 0.00 33.26 2.24
6533 7516 4.081972 ACCATCAGTCACTAGCAGTTACTG 60.082 45.833 17.44 17.44 46.48 2.74
6681 7665 6.017770 TGGGTTCAACACTACATCTAAAAACG 60.018 38.462 0.00 0.00 0.00 3.60
6778 7769 8.232098 AGTGGGAAGGGCTAAATATATATTGT 57.768 34.615 8.74 2.85 0.00 2.71
6779 7770 9.346515 AGTGGGAAGGGCTAAATATATATTGTA 57.653 33.333 8.74 3.75 0.00 2.41
6780 7771 9.392259 GTGGGAAGGGCTAAATATATATTGTAC 57.608 37.037 8.74 1.82 0.00 2.90
6902 7893 9.739276 TTTGAACCTGACAAAATACTAGATCAT 57.261 29.630 0.00 0.00 34.89 2.45
6976 7968 4.252073 GCTCGTATGCTAGCTACCTAGTA 58.748 47.826 17.23 0.00 42.51 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.167219 CGAGCGCACAATCATCCGT 61.167 57.895 11.47 0.00 0.00 4.69
41 42 2.765250 AAGGTCGACGAGCGCACAAT 62.765 55.000 20.23 0.00 40.61 2.71
44 45 3.173240 GAAGGTCGACGAGCGCAC 61.173 66.667 20.23 0.96 40.61 5.34
58 59 3.533606 AATCTGACGGTCATGGAGAAG 57.466 47.619 11.86 0.00 0.00 2.85
110 111 7.165318 GCAAGTTGCAAAAACTGTACTAAGTAC 59.835 37.037 22.90 0.00 44.26 2.73
113 114 6.496524 GCAAGTTGCAAAAACTGTACTAAG 57.503 37.500 22.90 0.00 44.26 2.18
128 129 4.799419 ATTGAAACAATGTGCAAGTTGC 57.201 36.364 21.17 21.17 45.29 4.17
129 130 5.503498 CCAATTGAAACAATGTGCAAGTTG 58.497 37.500 7.12 9.97 0.00 3.16
130 131 4.035441 GCCAATTGAAACAATGTGCAAGTT 59.965 37.500 7.12 0.00 0.00 2.66
131 132 3.560896 GCCAATTGAAACAATGTGCAAGT 59.439 39.130 7.12 3.09 0.00 3.16
132 133 3.810941 AGCCAATTGAAACAATGTGCAAG 59.189 39.130 7.12 0.00 0.00 4.01
133 134 3.806380 AGCCAATTGAAACAATGTGCAA 58.194 36.364 7.12 4.77 0.00 4.08
134 135 3.472283 AGCCAATTGAAACAATGTGCA 57.528 38.095 7.12 0.00 0.00 4.57
135 136 3.808726 TCAAGCCAATTGAAACAATGTGC 59.191 39.130 7.12 0.00 45.00 4.57
145 146 2.302260 TGTTTCGGTCAAGCCAATTGA 58.698 42.857 7.12 0.00 45.79 2.57
146 147 2.791383 TGTTTCGGTCAAGCCAATTG 57.209 45.000 0.00 0.00 40.52 2.32
147 148 3.810310 TTTGTTTCGGTCAAGCCAATT 57.190 38.095 0.00 0.00 36.97 2.32
148 149 3.554752 CCATTTGTTTCGGTCAAGCCAAT 60.555 43.478 0.00 0.00 36.97 3.16
149 150 2.223923 CCATTTGTTTCGGTCAAGCCAA 60.224 45.455 0.00 0.00 36.97 4.52
150 151 1.339610 CCATTTGTTTCGGTCAAGCCA 59.660 47.619 0.00 0.00 36.97 4.75
151 152 1.934849 GCCATTTGTTTCGGTCAAGCC 60.935 52.381 0.00 0.00 0.00 4.35
152 153 1.000274 AGCCATTTGTTTCGGTCAAGC 60.000 47.619 0.00 0.00 0.00 4.01
153 154 3.502211 ACTAGCCATTTGTTTCGGTCAAG 59.498 43.478 0.00 0.00 0.00 3.02
154 155 3.482436 ACTAGCCATTTGTTTCGGTCAA 58.518 40.909 0.00 0.00 0.00 3.18
155 156 3.134574 ACTAGCCATTTGTTTCGGTCA 57.865 42.857 0.00 0.00 0.00 4.02
156 157 3.821841 CAACTAGCCATTTGTTTCGGTC 58.178 45.455 0.00 0.00 0.00 4.79
157 158 2.030274 GCAACTAGCCATTTGTTTCGGT 60.030 45.455 0.00 0.00 37.23 4.69
158 159 2.030363 TGCAACTAGCCATTTGTTTCGG 60.030 45.455 0.00 0.00 44.83 4.30
159 160 3.058293 TCTGCAACTAGCCATTTGTTTCG 60.058 43.478 0.00 0.00 44.83 3.46
160 161 4.229876 GTCTGCAACTAGCCATTTGTTTC 58.770 43.478 0.00 0.00 44.83 2.78
161 162 3.005791 GGTCTGCAACTAGCCATTTGTTT 59.994 43.478 0.00 0.00 44.83 2.83
162 163 2.558359 GGTCTGCAACTAGCCATTTGTT 59.442 45.455 0.00 0.00 44.83 2.83
163 164 2.162681 GGTCTGCAACTAGCCATTTGT 58.837 47.619 0.00 0.00 44.83 2.83
164 165 1.131126 CGGTCTGCAACTAGCCATTTG 59.869 52.381 0.00 0.00 44.83 2.32
165 166 1.453155 CGGTCTGCAACTAGCCATTT 58.547 50.000 0.00 0.00 44.83 2.32
166 167 1.026718 GCGGTCTGCAACTAGCCATT 61.027 55.000 0.00 0.00 45.45 3.16
167 168 1.450312 GCGGTCTGCAACTAGCCAT 60.450 57.895 0.00 0.00 45.45 4.40
168 169 2.047274 GCGGTCTGCAACTAGCCA 60.047 61.111 0.00 0.00 45.45 4.75
169 170 3.188786 CGCGGTCTGCAACTAGCC 61.189 66.667 4.16 0.00 46.97 3.93
170 171 3.854459 GCGCGGTCTGCAACTAGC 61.854 66.667 8.83 0.00 46.97 3.42
171 172 2.432456 TGCGCGGTCTGCAACTAG 60.432 61.111 8.83 0.00 46.97 2.57
172 173 2.736995 GTGCGCGGTCTGCAACTA 60.737 61.111 8.83 0.00 45.23 2.24
173 174 4.609018 AGTGCGCGGTCTGCAACT 62.609 61.111 8.83 3.86 45.23 3.16
174 175 4.077188 GAGTGCGCGGTCTGCAAC 62.077 66.667 8.83 1.39 45.23 4.17
175 176 4.600576 TGAGTGCGCGGTCTGCAA 62.601 61.111 8.83 0.00 45.23 4.08
185 186 3.108289 CTGCTGGTCGTGAGTGCG 61.108 66.667 0.00 0.00 0.00 5.34
186 187 3.418068 GCTGCTGGTCGTGAGTGC 61.418 66.667 0.00 0.00 0.00 4.40
187 188 2.740055 GGCTGCTGGTCGTGAGTG 60.740 66.667 0.00 0.00 0.00 3.51
188 189 4.363990 CGGCTGCTGGTCGTGAGT 62.364 66.667 0.00 0.00 38.36 3.41
189 190 3.978723 CTCGGCTGCTGGTCGTGAG 62.979 68.421 8.89 0.00 44.25 3.51
190 191 4.056125 CTCGGCTGCTGGTCGTGA 62.056 66.667 8.89 0.00 44.25 4.35
191 192 4.363990 ACTCGGCTGCTGGTCGTG 62.364 66.667 8.89 2.77 44.25 4.35
192 193 4.363990 CACTCGGCTGCTGGTCGT 62.364 66.667 8.89 1.08 44.25 4.34
203 204 2.290122 CTACAGGCTGGAGCACTCGG 62.290 65.000 15.04 0.00 44.36 4.63
204 205 1.140589 CTACAGGCTGGAGCACTCG 59.859 63.158 15.04 0.00 44.36 4.18
205 206 0.972983 TCCTACAGGCTGGAGCACTC 60.973 60.000 21.83 0.00 44.36 3.51
206 207 1.079256 TCCTACAGGCTGGAGCACT 59.921 57.895 21.83 0.00 44.36 4.40
207 208 1.219393 GTCCTACAGGCTGGAGCAC 59.781 63.158 21.83 13.86 44.36 4.40
208 209 2.351244 CGTCCTACAGGCTGGAGCA 61.351 63.158 21.83 2.89 44.36 4.26
209 210 2.286127 GACGTCCTACAGGCTGGAGC 62.286 65.000 21.83 7.75 41.14 4.70
210 211 0.965866 TGACGTCCTACAGGCTGGAG 60.966 60.000 20.33 20.33 32.36 3.86
211 212 1.076014 TGACGTCCTACAGGCTGGA 59.924 57.895 20.34 9.92 34.44 3.86
212 213 1.215647 GTGACGTCCTACAGGCTGG 59.784 63.158 20.34 0.41 34.44 4.85
213 214 1.215647 GGTGACGTCCTACAGGCTG 59.784 63.158 14.16 14.16 34.44 4.85
214 215 3.696084 GGTGACGTCCTACAGGCT 58.304 61.111 14.12 0.00 34.44 4.58
259 260 3.103911 CAACGACGTCCTGGCGAC 61.104 66.667 10.58 9.45 38.21 5.19
262 263 4.980805 TGGCAACGACGTCCTGGC 62.981 66.667 24.04 24.04 42.51 4.85
263 264 2.280524 TTGGCAACGACGTCCTGG 60.281 61.111 10.58 0.00 42.51 4.45
264 265 2.954753 GCTTGGCAACGACGTCCTG 61.955 63.158 10.58 8.92 42.51 3.86
265 266 2.665185 GCTTGGCAACGACGTCCT 60.665 61.111 10.58 0.00 42.51 3.85
266 267 4.072088 CGCTTGGCAACGACGTCC 62.072 66.667 10.58 0.00 42.51 4.79
267 268 4.719616 GCGCTTGGCAACGACGTC 62.720 66.667 20.76 5.18 42.87 4.34
277 278 3.899981 TACAGGCAGTGGCGCTTGG 62.900 63.158 11.51 2.72 42.87 3.61
278 279 2.358615 TACAGGCAGTGGCGCTTG 60.359 61.111 11.51 6.95 44.06 4.01
279 280 2.046892 CTACAGGCAGTGGCGCTT 60.047 61.111 11.51 2.04 42.47 4.68
280 281 4.087892 CCTACAGGCAGTGGCGCT 62.088 66.667 11.51 0.00 42.47 5.92
281 282 4.394712 ACCTACAGGCAGTGGCGC 62.395 66.667 11.51 0.00 42.47 6.53
282 283 2.434884 CACCTACAGGCAGTGGCG 60.435 66.667 11.51 8.87 42.47 5.69
283 284 1.078848 CTCACCTACAGGCAGTGGC 60.079 63.158 9.02 9.02 39.32 5.01
284 285 1.599047 CCTCACCTACAGGCAGTGG 59.401 63.158 0.00 0.00 39.32 4.00
285 286 1.599047 CCCTCACCTACAGGCAGTG 59.401 63.158 0.00 0.00 39.32 3.66
286 287 2.294078 GCCCTCACCTACAGGCAGT 61.294 63.158 0.00 0.00 45.07 4.40
287 288 2.586792 GCCCTCACCTACAGGCAG 59.413 66.667 0.00 0.00 45.07 4.85
288 289 3.390521 CGCCCTCACCTACAGGCA 61.391 66.667 0.30 0.00 46.08 4.75
289 290 3.372554 GACGCCCTCACCTACAGGC 62.373 68.421 0.00 0.00 42.18 4.85
290 291 2.893398 GACGCCCTCACCTACAGG 59.107 66.667 0.00 0.00 42.17 4.00
291 292 2.267681 GACGACGCCCTCACCTACAG 62.268 65.000 0.00 0.00 0.00 2.74
292 293 2.282674 ACGACGCCCTCACCTACA 60.283 61.111 0.00 0.00 0.00 2.74
293 294 2.488820 GACGACGCCCTCACCTAC 59.511 66.667 0.00 0.00 0.00 3.18
294 295 3.129502 CGACGACGCCCTCACCTA 61.130 66.667 0.00 0.00 0.00 3.08
297 298 3.948086 CTCACGACGACGCCCTCAC 62.948 68.421 7.30 0.00 43.96 3.51
298 299 3.733960 CTCACGACGACGCCCTCA 61.734 66.667 7.30 0.00 43.96 3.86
299 300 3.735029 ACTCACGACGACGCCCTC 61.735 66.667 7.30 0.00 43.96 4.30
300 301 4.039357 CACTCACGACGACGCCCT 62.039 66.667 7.30 0.00 43.96 5.19
302 303 4.994201 TGCACTCACGACGACGCC 62.994 66.667 7.30 0.00 43.96 5.68
303 304 2.778997 GATGCACTCACGACGACGC 61.779 63.158 7.30 0.00 43.96 5.19
304 305 2.152699 GGATGCACTCACGACGACG 61.153 63.158 5.58 5.58 45.75 5.12
305 306 0.458543 ATGGATGCACTCACGACGAC 60.459 55.000 0.00 0.00 0.00 4.34
306 307 0.458370 CATGGATGCACTCACGACGA 60.458 55.000 0.00 0.00 0.00 4.20
307 308 2.001357 CATGGATGCACTCACGACG 58.999 57.895 0.00 0.00 0.00 5.12
318 319 2.141517 GACAGAGATTCGGCATGGATG 58.858 52.381 0.00 0.00 0.00 3.51
319 320 1.269988 CGACAGAGATTCGGCATGGAT 60.270 52.381 0.00 0.00 32.66 3.41
320 321 0.103026 CGACAGAGATTCGGCATGGA 59.897 55.000 0.00 0.00 32.66 3.41
321 322 1.493950 GCGACAGAGATTCGGCATGG 61.494 60.000 0.00 0.00 36.96 3.66
322 323 1.930100 GCGACAGAGATTCGGCATG 59.070 57.895 0.00 0.00 36.96 4.06
323 324 4.427394 GCGACAGAGATTCGGCAT 57.573 55.556 0.00 0.00 36.96 4.40
326 327 0.721718 GTTTGGCGACAGAGATTCGG 59.278 55.000 0.00 0.00 44.54 4.30
327 328 0.366871 CGTTTGGCGACAGAGATTCG 59.633 55.000 0.00 0.00 44.54 3.34
328 329 0.095417 GCGTTTGGCGACAGAGATTC 59.905 55.000 0.00 0.00 44.54 2.52
329 330 2.162716 GCGTTTGGCGACAGAGATT 58.837 52.632 0.00 0.00 44.54 2.40
330 331 3.876300 GCGTTTGGCGACAGAGAT 58.124 55.556 0.00 0.00 44.54 2.75
346 347 3.140225 GATCTGGTCGACGGGAGGC 62.140 68.421 9.92 3.41 0.00 4.70
347 348 1.320344 TTGATCTGGTCGACGGGAGG 61.320 60.000 9.92 0.00 0.00 4.30
348 349 0.179134 GTTGATCTGGTCGACGGGAG 60.179 60.000 9.92 5.53 31.74 4.30
349 350 1.888018 GTTGATCTGGTCGACGGGA 59.112 57.895 9.92 10.34 31.74 5.14
350 351 4.496670 GTTGATCTGGTCGACGGG 57.503 61.111 9.92 4.75 31.74 5.28
353 354 1.536284 GGATCCGTTGATCTGGTCGAC 60.536 57.143 7.13 7.13 45.62 4.20
354 355 0.744874 GGATCCGTTGATCTGGTCGA 59.255 55.000 0.00 0.00 45.62 4.20
355 356 0.595053 CGGATCCGTTGATCTGGTCG 60.595 60.000 26.35 0.00 46.46 4.79
356 357 3.274393 CGGATCCGTTGATCTGGTC 57.726 57.895 26.35 0.00 46.46 4.02
360 361 2.076622 CTCGCCGGATCCGTTGATCT 62.077 60.000 31.22 0.00 45.62 2.75
361 362 1.661821 CTCGCCGGATCCGTTGATC 60.662 63.158 31.22 13.99 45.61 2.92
362 363 1.464376 ATCTCGCCGGATCCGTTGAT 61.464 55.000 31.22 22.91 37.81 2.57
363 364 2.071844 GATCTCGCCGGATCCGTTGA 62.072 60.000 31.22 25.20 36.91 3.18
364 365 1.661821 GATCTCGCCGGATCCGTTG 60.662 63.158 31.22 22.59 36.91 4.10
365 366 2.728817 GATCTCGCCGGATCCGTT 59.271 61.111 31.22 9.71 36.91 4.44
397 398 2.109126 GTGAGGTTGATGGCGCTCC 61.109 63.158 7.64 0.78 0.00 4.70
398 399 2.109126 GGTGAGGTTGATGGCGCTC 61.109 63.158 7.64 0.00 0.00 5.03
399 400 2.045926 GGTGAGGTTGATGGCGCT 60.046 61.111 7.64 0.00 0.00 5.92
400 401 1.315257 AATGGTGAGGTTGATGGCGC 61.315 55.000 0.00 0.00 0.00 6.53
401 402 0.452987 CAATGGTGAGGTTGATGGCG 59.547 55.000 0.00 0.00 0.00 5.69
402 403 1.474077 GACAATGGTGAGGTTGATGGC 59.526 52.381 0.00 0.00 0.00 4.40
403 404 2.094675 GGACAATGGTGAGGTTGATGG 58.905 52.381 0.00 0.00 0.00 3.51
404 405 3.077484 AGGACAATGGTGAGGTTGATG 57.923 47.619 0.00 0.00 0.00 3.07
405 406 3.370953 GCTAGGACAATGGTGAGGTTGAT 60.371 47.826 0.00 0.00 0.00 2.57
406 407 2.027192 GCTAGGACAATGGTGAGGTTGA 60.027 50.000 0.00 0.00 0.00 3.18
407 408 2.290260 TGCTAGGACAATGGTGAGGTTG 60.290 50.000 0.00 0.00 0.00 3.77
408 409 1.985159 TGCTAGGACAATGGTGAGGTT 59.015 47.619 0.00 0.00 0.00 3.50
409 410 1.279271 GTGCTAGGACAATGGTGAGGT 59.721 52.381 9.84 0.00 0.00 3.85
410 411 1.407437 GGTGCTAGGACAATGGTGAGG 60.407 57.143 16.81 0.00 0.00 3.86
411 412 1.278985 TGGTGCTAGGACAATGGTGAG 59.721 52.381 16.81 0.00 0.00 3.51
412 413 1.003118 GTGGTGCTAGGACAATGGTGA 59.997 52.381 16.81 0.00 0.00 4.02
413 414 1.453155 GTGGTGCTAGGACAATGGTG 58.547 55.000 16.81 0.00 0.00 4.17
414 415 0.328258 GGTGGTGCTAGGACAATGGT 59.672 55.000 16.81 0.00 0.00 3.55
415 416 0.327924 TGGTGGTGCTAGGACAATGG 59.672 55.000 16.81 0.00 0.00 3.16
416 417 1.742761 CTGGTGGTGCTAGGACAATG 58.257 55.000 16.81 0.00 0.00 2.82
417 418 0.035056 GCTGGTGGTGCTAGGACAAT 60.035 55.000 16.81 0.00 0.00 2.71
418 419 1.374947 GCTGGTGGTGCTAGGACAA 59.625 57.895 16.81 1.09 0.00 3.18
419 420 2.942796 CGCTGGTGGTGCTAGGACA 61.943 63.158 16.81 0.00 0.00 4.02
420 421 2.125512 CGCTGGTGGTGCTAGGAC 60.126 66.667 5.70 5.70 0.00 3.85
421 422 4.082523 GCGCTGGTGGTGCTAGGA 62.083 66.667 0.00 0.00 46.82 2.94
427 428 2.816958 CTGCTAGCGCTGGTGGTG 60.817 66.667 22.90 5.14 36.97 4.17
428 429 4.767255 GCTGCTAGCGCTGGTGGT 62.767 66.667 22.90 0.00 35.83 4.16
429 430 4.765449 TGCTGCTAGCGCTGGTGG 62.765 66.667 22.90 14.93 46.26 4.61
430 431 3.193614 CTGCTGCTAGCGCTGGTG 61.194 66.667 22.90 15.37 46.26 4.17
436 437 2.513204 ATGTGGCTGCTGCTAGCG 60.513 61.111 15.64 6.22 46.26 4.26
437 438 0.818445 ATGATGTGGCTGCTGCTAGC 60.818 55.000 15.64 8.10 42.82 3.42
438 439 2.538512 TATGATGTGGCTGCTGCTAG 57.461 50.000 15.64 0.00 39.59 3.42
439 440 2.564771 GTTATGATGTGGCTGCTGCTA 58.435 47.619 15.64 6.53 39.59 3.49
440 441 1.386533 GTTATGATGTGGCTGCTGCT 58.613 50.000 15.64 0.00 39.59 4.24
441 442 0.028505 CGTTATGATGTGGCTGCTGC 59.971 55.000 7.10 7.10 38.76 5.25
442 443 0.028505 GCGTTATGATGTGGCTGCTG 59.971 55.000 0.00 0.00 0.00 4.41
443 444 1.097547 GGCGTTATGATGTGGCTGCT 61.098 55.000 0.00 0.00 0.00 4.24
444 445 1.356624 GGCGTTATGATGTGGCTGC 59.643 57.895 0.00 0.00 0.00 5.25
445 446 1.089481 ACGGCGTTATGATGTGGCTG 61.089 55.000 6.77 0.00 36.12 4.85
446 447 0.462375 TACGGCGTTATGATGTGGCT 59.538 50.000 21.24 0.00 0.00 4.75
447 448 0.580104 GTACGGCGTTATGATGTGGC 59.420 55.000 21.24 0.00 0.00 5.01
448 449 0.850217 CGTACGGCGTTATGATGTGG 59.150 55.000 21.24 0.00 35.54 4.17
466 467 1.372997 CTTGGAGTGGACGTGGACG 60.373 63.158 0.00 0.00 46.33 4.79
467 468 0.106149 AACTTGGAGTGGACGTGGAC 59.894 55.000 0.00 0.00 0.00 4.02
468 469 1.342174 GTAACTTGGAGTGGACGTGGA 59.658 52.381 0.00 0.00 0.00 4.02
469 470 1.792006 GTAACTTGGAGTGGACGTGG 58.208 55.000 0.00 0.00 0.00 4.94
470 471 1.415374 CGTAACTTGGAGTGGACGTG 58.585 55.000 0.00 0.00 35.14 4.49
471 472 0.316204 CCGTAACTTGGAGTGGACGT 59.684 55.000 12.08 0.00 36.94 4.34
472 473 0.599558 TCCGTAACTTGGAGTGGACG 59.400 55.000 8.15 8.15 37.82 4.79
473 474 2.825861 TTCCGTAACTTGGAGTGGAC 57.174 50.000 0.00 0.00 36.72 4.02
474 475 3.842007 TTTTCCGTAACTTGGAGTGGA 57.158 42.857 0.00 0.00 36.72 4.02
475 476 5.935789 TCTAATTTTCCGTAACTTGGAGTGG 59.064 40.000 0.00 0.00 36.72 4.00
476 477 6.425721 TGTCTAATTTTCCGTAACTTGGAGTG 59.574 38.462 0.00 0.00 36.72 3.51
477 478 6.426025 GTGTCTAATTTTCCGTAACTTGGAGT 59.574 38.462 0.00 0.00 36.72 3.85
478 479 6.400727 CGTGTCTAATTTTCCGTAACTTGGAG 60.401 42.308 0.00 0.00 36.72 3.86
479 480 5.406175 CGTGTCTAATTTTCCGTAACTTGGA 59.594 40.000 0.00 0.00 0.00 3.53
480 481 5.390145 CCGTGTCTAATTTTCCGTAACTTGG 60.390 44.000 0.00 0.00 0.00 3.61
481 482 5.614760 CCGTGTCTAATTTTCCGTAACTTG 58.385 41.667 0.00 0.00 0.00 3.16
482 483 4.152938 GCCGTGTCTAATTTTCCGTAACTT 59.847 41.667 0.00 0.00 0.00 2.66
483 484 3.681417 GCCGTGTCTAATTTTCCGTAACT 59.319 43.478 0.00 0.00 0.00 2.24
484 485 3.482436 CGCCGTGTCTAATTTTCCGTAAC 60.482 47.826 0.00 0.00 0.00 2.50
485 486 2.667481 CGCCGTGTCTAATTTTCCGTAA 59.333 45.455 0.00 0.00 0.00 3.18
486 487 2.261345 CGCCGTGTCTAATTTTCCGTA 58.739 47.619 0.00 0.00 0.00 4.02
487 488 1.073177 CGCCGTGTCTAATTTTCCGT 58.927 50.000 0.00 0.00 0.00 4.69
488 489 0.372334 CCGCCGTGTCTAATTTTCCG 59.628 55.000 0.00 0.00 0.00 4.30
489 490 0.730840 CCCGCCGTGTCTAATTTTCC 59.269 55.000 0.00 0.00 0.00 3.13
490 491 0.730840 CCCCGCCGTGTCTAATTTTC 59.269 55.000 0.00 0.00 0.00 2.29
491 492 0.325602 TCCCCGCCGTGTCTAATTTT 59.674 50.000 0.00 0.00 0.00 1.82
492 493 0.107848 CTCCCCGCCGTGTCTAATTT 60.108 55.000 0.00 0.00 0.00 1.82
493 494 0.974010 TCTCCCCGCCGTGTCTAATT 60.974 55.000 0.00 0.00 0.00 1.40
494 495 0.759436 ATCTCCCCGCCGTGTCTAAT 60.759 55.000 0.00 0.00 0.00 1.73
495 496 0.974010 AATCTCCCCGCCGTGTCTAA 60.974 55.000 0.00 0.00 0.00 2.10
496 497 0.974010 AAATCTCCCCGCCGTGTCTA 60.974 55.000 0.00 0.00 0.00 2.59
497 498 1.838073 AAAATCTCCCCGCCGTGTCT 61.838 55.000 0.00 0.00 0.00 3.41
498 499 0.958876 AAAAATCTCCCCGCCGTGTC 60.959 55.000 0.00 0.00 0.00 3.67
499 500 1.074248 AAAAATCTCCCCGCCGTGT 59.926 52.632 0.00 0.00 0.00 4.49
500 501 3.996614 AAAAATCTCCCCGCCGTG 58.003 55.556 0.00 0.00 0.00 4.94
515 516 6.002062 ACCGTTGTTGCAAAAATTGAAAAA 57.998 29.167 5.11 0.00 27.80 1.94
516 517 5.409826 AGACCGTTGTTGCAAAAATTGAAAA 59.590 32.000 5.11 0.00 27.80 2.29
517 518 4.932200 AGACCGTTGTTGCAAAAATTGAAA 59.068 33.333 5.11 0.00 0.00 2.69
518 519 4.499183 AGACCGTTGTTGCAAAAATTGAA 58.501 34.783 5.11 0.00 0.00 2.69
519 520 4.116747 AGACCGTTGTTGCAAAAATTGA 57.883 36.364 5.11 0.00 0.00 2.57
520 521 4.092675 ACAAGACCGTTGTTGCAAAAATTG 59.907 37.500 5.11 8.06 28.73 2.32
521 522 4.249661 ACAAGACCGTTGTTGCAAAAATT 58.750 34.783 5.11 0.00 28.73 1.82
522 523 3.855858 ACAAGACCGTTGTTGCAAAAAT 58.144 36.364 5.11 0.00 28.73 1.82
523 524 3.305398 ACAAGACCGTTGTTGCAAAAA 57.695 38.095 0.00 0.00 28.73 1.94
524 525 3.305398 AACAAGACCGTTGTTGCAAAA 57.695 38.095 0.00 0.00 40.70 2.44
530 531 1.745232 TCTGCAACAAGACCGTTGTT 58.255 45.000 5.76 0.00 46.47 2.83
531 532 1.745232 TTCTGCAACAAGACCGTTGT 58.255 45.000 5.76 0.00 46.47 3.32
533 534 4.385358 AATTTTCTGCAACAAGACCGTT 57.615 36.364 0.00 0.00 0.00 4.44
534 535 4.819630 TCTAATTTTCTGCAACAAGACCGT 59.180 37.500 0.00 0.00 0.00 4.83
535 536 5.179368 TCTCTAATTTTCTGCAACAAGACCG 59.821 40.000 0.00 0.00 0.00 4.79
536 537 6.560253 TCTCTAATTTTCTGCAACAAGACC 57.440 37.500 0.00 0.00 0.00 3.85
541 542 9.725019 TCTCTTATTCTCTAATTTTCTGCAACA 57.275 29.630 0.00 0.00 0.00 3.33
543 544 9.950496 ACTCTCTTATTCTCTAATTTTCTGCAA 57.050 29.630 0.00 0.00 0.00 4.08
544 545 9.950496 AACTCTCTTATTCTCTAATTTTCTGCA 57.050 29.630 0.00 0.00 0.00 4.41
569 570 1.480137 CAACAAGTCCCCTGTTGCAAA 59.520 47.619 0.00 0.00 36.86 3.68
570 571 1.110442 CAACAAGTCCCCTGTTGCAA 58.890 50.000 0.00 0.00 36.86 4.08
571 572 2.805897 CAACAAGTCCCCTGTTGCA 58.194 52.632 3.02 0.00 36.86 4.08
573 574 1.110442 TTGCAACAAGTCCCCTGTTG 58.890 50.000 10.57 10.57 43.90 3.33
574 575 1.859302 TTTGCAACAAGTCCCCTGTT 58.141 45.000 0.00 0.00 0.00 3.16
575 576 1.859302 TTTTGCAACAAGTCCCCTGT 58.141 45.000 0.00 0.00 0.00 4.00
576 577 2.977772 TTTTTGCAACAAGTCCCCTG 57.022 45.000 0.00 0.00 0.00 4.45
607 608 9.628746 CAACATGACATTAATTGTGAAATCTCA 57.371 29.630 0.00 0.00 39.18 3.27
608 609 8.589629 GCAACATGACATTAATTGTGAAATCTC 58.410 33.333 0.00 0.00 39.18 2.75
609 610 8.089597 TGCAACATGACATTAATTGTGAAATCT 58.910 29.630 0.00 0.00 39.18 2.40
610 611 8.242085 TGCAACATGACATTAATTGTGAAATC 57.758 30.769 0.00 0.00 39.18 2.17
611 612 7.332430 CCTGCAACATGACATTAATTGTGAAAT 59.668 33.333 0.00 0.00 39.18 2.17
612 613 6.645827 CCTGCAACATGACATTAATTGTGAAA 59.354 34.615 0.00 0.00 39.18 2.69
613 614 6.015603 TCCTGCAACATGACATTAATTGTGAA 60.016 34.615 0.00 0.00 39.18 3.18
614 615 5.476254 TCCTGCAACATGACATTAATTGTGA 59.524 36.000 0.00 0.00 39.18 3.58
615 616 5.712004 TCCTGCAACATGACATTAATTGTG 58.288 37.500 0.00 0.00 39.18 3.33
616 617 5.981088 TCCTGCAACATGACATTAATTGT 57.019 34.783 0.00 0.00 42.79 2.71
617 618 7.837202 ATTTCCTGCAACATGACATTAATTG 57.163 32.000 0.00 0.00 0.00 2.32
618 619 9.590451 CTAATTTCCTGCAACATGACATTAATT 57.410 29.630 0.00 4.30 0.00 1.40
619 620 8.970020 TCTAATTTCCTGCAACATGACATTAAT 58.030 29.630 0.00 0.00 0.00 1.40
620 621 8.347004 TCTAATTTCCTGCAACATGACATTAA 57.653 30.769 0.00 0.00 0.00 1.40
621 622 7.828717 TCTCTAATTTCCTGCAACATGACATTA 59.171 33.333 0.00 0.00 0.00 1.90
622 623 6.660521 TCTCTAATTTCCTGCAACATGACATT 59.339 34.615 0.00 0.00 0.00 2.71
623 624 6.182627 TCTCTAATTTCCTGCAACATGACAT 58.817 36.000 0.00 0.00 0.00 3.06
624 625 5.559770 TCTCTAATTTCCTGCAACATGACA 58.440 37.500 0.00 0.00 0.00 3.58
625 626 6.372659 TCTTCTCTAATTTCCTGCAACATGAC 59.627 38.462 0.00 0.00 0.00 3.06
626 627 6.475504 TCTTCTCTAATTTCCTGCAACATGA 58.524 36.000 0.00 0.00 0.00 3.07
627 628 6.183360 CCTCTTCTCTAATTTCCTGCAACATG 60.183 42.308 0.00 0.00 0.00 3.21
628 629 5.884792 CCTCTTCTCTAATTTCCTGCAACAT 59.115 40.000 0.00 0.00 0.00 2.71
629 630 5.013079 TCCTCTTCTCTAATTTCCTGCAACA 59.987 40.000 0.00 0.00 0.00 3.33
630 631 5.491982 TCCTCTTCTCTAATTTCCTGCAAC 58.508 41.667 0.00 0.00 0.00 4.17
631 632 5.338708 CCTCCTCTTCTCTAATTTCCTGCAA 60.339 44.000 0.00 0.00 0.00 4.08
632 633 4.163078 CCTCCTCTTCTCTAATTTCCTGCA 59.837 45.833 0.00 0.00 0.00 4.41
633 634 4.163268 ACCTCCTCTTCTCTAATTTCCTGC 59.837 45.833 0.00 0.00 0.00 4.85
634 635 5.948742 ACCTCCTCTTCTCTAATTTCCTG 57.051 43.478 0.00 0.00 0.00 3.86
635 636 6.351456 CGAAACCTCCTCTTCTCTAATTTCCT 60.351 42.308 0.00 0.00 0.00 3.36
636 637 5.813157 CGAAACCTCCTCTTCTCTAATTTCC 59.187 44.000 0.00 0.00 0.00 3.13
637 638 5.292345 GCGAAACCTCCTCTTCTCTAATTTC 59.708 44.000 0.00 0.00 0.00 2.17
638 639 5.179533 GCGAAACCTCCTCTTCTCTAATTT 58.820 41.667 0.00 0.00 0.00 1.82
639 640 4.223032 TGCGAAACCTCCTCTTCTCTAATT 59.777 41.667 0.00 0.00 0.00 1.40
640 641 3.769844 TGCGAAACCTCCTCTTCTCTAAT 59.230 43.478 0.00 0.00 0.00 1.73
641 642 3.162666 TGCGAAACCTCCTCTTCTCTAA 58.837 45.455 0.00 0.00 0.00 2.10
642 643 2.803956 TGCGAAACCTCCTCTTCTCTA 58.196 47.619 0.00 0.00 0.00 2.43
643 644 1.633774 TGCGAAACCTCCTCTTCTCT 58.366 50.000 0.00 0.00 0.00 3.10
644 645 2.070028 GTTGCGAAACCTCCTCTTCTC 58.930 52.381 0.00 0.00 0.00 2.87
645 646 1.416401 TGTTGCGAAACCTCCTCTTCT 59.584 47.619 3.18 0.00 0.00 2.85
646 647 1.878953 TGTTGCGAAACCTCCTCTTC 58.121 50.000 3.18 0.00 0.00 2.87
647 648 2.341846 TTGTTGCGAAACCTCCTCTT 57.658 45.000 3.18 0.00 0.00 2.85
648 649 2.341846 TTTGTTGCGAAACCTCCTCT 57.658 45.000 3.18 0.00 0.00 3.69
649 650 2.357952 ACTTTTGTTGCGAAACCTCCTC 59.642 45.455 3.18 0.00 0.00 3.71
650 651 2.375146 ACTTTTGTTGCGAAACCTCCT 58.625 42.857 3.18 0.00 0.00 3.69
651 652 2.863401 ACTTTTGTTGCGAAACCTCC 57.137 45.000 3.18 0.00 0.00 4.30
652 653 4.387559 ACAAAACTTTTGTTGCGAAACCTC 59.612 37.500 13.19 0.00 42.67 3.85
653 654 4.311606 ACAAAACTTTTGTTGCGAAACCT 58.688 34.783 13.19 0.00 42.67 3.50
654 655 4.655440 ACAAAACTTTTGTTGCGAAACC 57.345 36.364 13.19 0.00 42.67 3.27
668 669 9.651913 TCTTCTTTAATTTTCTGCAACAAAACT 57.348 25.926 5.56 0.00 0.00 2.66
669 670 9.906111 CTCTTCTTTAATTTTCTGCAACAAAAC 57.094 29.630 5.56 0.00 0.00 2.43
670 671 9.868277 TCTCTTCTTTAATTTTCTGCAACAAAA 57.132 25.926 5.85 5.85 0.00 2.44
671 672 9.868277 TTCTCTTCTTTAATTTTCTGCAACAAA 57.132 25.926 0.00 0.00 0.00 2.83
672 673 9.868277 TTTCTCTTCTTTAATTTTCTGCAACAA 57.132 25.926 0.00 0.00 0.00 2.83
673 674 9.520204 CTTTCTCTTCTTTAATTTTCTGCAACA 57.480 29.630 0.00 0.00 0.00 3.33
674 675 9.521503 ACTTTCTCTTCTTTAATTTTCTGCAAC 57.478 29.630 0.00 0.00 0.00 4.17
675 676 9.520204 CACTTTCTCTTCTTTAATTTTCTGCAA 57.480 29.630 0.00 0.00 0.00 4.08
676 677 8.902806 TCACTTTCTCTTCTTTAATTTTCTGCA 58.097 29.630 0.00 0.00 0.00 4.41
677 678 9.175060 GTCACTTTCTCTTCTTTAATTTTCTGC 57.825 33.333 0.00 0.00 0.00 4.26
680 681 9.175060 GCAGTCACTTTCTCTTCTTTAATTTTC 57.825 33.333 0.00 0.00 0.00 2.29
681 682 8.907885 AGCAGTCACTTTCTCTTCTTTAATTTT 58.092 29.630 0.00 0.00 0.00 1.82
682 683 8.348507 CAGCAGTCACTTTCTCTTCTTTAATTT 58.651 33.333 0.00 0.00 0.00 1.82
683 684 7.040823 CCAGCAGTCACTTTCTCTTCTTTAATT 60.041 37.037 0.00 0.00 0.00 1.40
684 685 6.429385 CCAGCAGTCACTTTCTCTTCTTTAAT 59.571 38.462 0.00 0.00 0.00 1.40
685 686 5.760253 CCAGCAGTCACTTTCTCTTCTTTAA 59.240 40.000 0.00 0.00 0.00 1.52
686 687 5.300752 CCAGCAGTCACTTTCTCTTCTTTA 58.699 41.667 0.00 0.00 0.00 1.85
687 688 4.133078 CCAGCAGTCACTTTCTCTTCTTT 58.867 43.478 0.00 0.00 0.00 2.52
688 689 3.737850 CCAGCAGTCACTTTCTCTTCTT 58.262 45.455 0.00 0.00 0.00 2.52
689 690 2.549778 GCCAGCAGTCACTTTCTCTTCT 60.550 50.000 0.00 0.00 0.00 2.85
690 691 1.803555 GCCAGCAGTCACTTTCTCTTC 59.196 52.381 0.00 0.00 0.00 2.87
691 692 1.875576 CGCCAGCAGTCACTTTCTCTT 60.876 52.381 0.00 0.00 0.00 2.85
692 693 0.320247 CGCCAGCAGTCACTTTCTCT 60.320 55.000 0.00 0.00 0.00 3.10
693 694 0.601311 ACGCCAGCAGTCACTTTCTC 60.601 55.000 0.00 0.00 0.00 2.87
694 695 0.601311 GACGCCAGCAGTCACTTTCT 60.601 55.000 8.90 0.00 38.42 2.52
695 696 1.862806 GACGCCAGCAGTCACTTTC 59.137 57.895 8.90 0.00 38.42 2.62
696 697 1.956170 CGACGCCAGCAGTCACTTT 60.956 57.895 12.62 0.00 38.46 2.66
697 698 2.356313 CGACGCCAGCAGTCACTT 60.356 61.111 12.62 0.00 38.46 3.16
698 699 3.606662 ACGACGCCAGCAGTCACT 61.607 61.111 12.62 0.00 38.46 3.41
699 700 3.406361 CACGACGCCAGCAGTCAC 61.406 66.667 12.62 0.00 38.46 3.67
700 701 4.662961 CCACGACGCCAGCAGTCA 62.663 66.667 12.62 0.00 38.46 3.41
701 702 3.858868 TTCCACGACGCCAGCAGTC 62.859 63.158 0.00 5.06 35.41 3.51
702 703 3.923864 TTCCACGACGCCAGCAGT 61.924 61.111 0.00 0.00 0.00 4.40
703 704 3.414700 GTTCCACGACGCCAGCAG 61.415 66.667 0.00 0.00 0.00 4.24
704 705 4.228567 TGTTCCACGACGCCAGCA 62.229 61.111 0.00 0.00 0.00 4.41
705 706 3.414700 CTGTTCCACGACGCCAGC 61.415 66.667 0.00 0.00 0.00 4.85
706 707 3.414700 GCTGTTCCACGACGCCAG 61.415 66.667 0.00 0.00 0.00 4.85
709 710 2.380410 AATCGCTGTTCCACGACGC 61.380 57.895 0.00 0.00 41.76 5.19
710 711 1.006825 TCAATCGCTGTTCCACGACG 61.007 55.000 0.00 0.00 41.76 5.12
711 712 1.144969 TTCAATCGCTGTTCCACGAC 58.855 50.000 0.00 0.00 41.76 4.34
712 713 1.798223 CTTTCAATCGCTGTTCCACGA 59.202 47.619 0.00 0.00 43.33 4.35
713 714 1.531149 ACTTTCAATCGCTGTTCCACG 59.469 47.619 0.00 0.00 0.00 4.94
714 715 3.626028 AACTTTCAATCGCTGTTCCAC 57.374 42.857 0.00 0.00 0.00 4.02
715 716 4.647424 AAAACTTTCAATCGCTGTTCCA 57.353 36.364 0.00 0.00 0.00 3.53
716 717 4.146443 CGAAAAACTTTCAATCGCTGTTCC 59.854 41.667 0.52 0.00 0.00 3.62
717 718 4.967575 TCGAAAAACTTTCAATCGCTGTTC 59.032 37.500 0.52 0.00 33.76 3.18
718 719 4.915704 TCGAAAAACTTTCAATCGCTGTT 58.084 34.783 0.52 0.00 33.76 3.16
719 720 4.545823 TCGAAAAACTTTCAATCGCTGT 57.454 36.364 0.52 0.00 33.76 4.40
720 721 4.732923 TGTTCGAAAAACTTTCAATCGCTG 59.267 37.500 0.00 0.00 33.76 5.18
721 722 4.915704 TGTTCGAAAAACTTTCAATCGCT 58.084 34.783 0.00 0.00 33.76 4.93
722 723 5.003967 TGTTGTTCGAAAAACTTTCAATCGC 59.996 36.000 27.06 2.51 33.76 4.58
723 724 6.291060 CCTGTTGTTCGAAAAACTTTCAATCG 60.291 38.462 27.06 8.93 34.98 3.34
724 725 6.530181 ACCTGTTGTTCGAAAAACTTTCAATC 59.470 34.615 27.06 3.83 0.00 2.67
725 726 6.394809 ACCTGTTGTTCGAAAAACTTTCAAT 58.605 32.000 27.06 8.42 0.00 2.57
726 727 5.774630 ACCTGTTGTTCGAAAAACTTTCAA 58.225 33.333 27.06 11.11 0.00 2.69
727 728 5.182380 AGACCTGTTGTTCGAAAAACTTTCA 59.818 36.000 27.06 10.14 0.00 2.69
728 729 5.511729 CAGACCTGTTGTTCGAAAAACTTTC 59.488 40.000 27.06 20.09 0.00 2.62
729 730 5.399013 CAGACCTGTTGTTCGAAAAACTTT 58.601 37.500 27.06 14.08 0.00 2.66
730 731 4.142469 CCAGACCTGTTGTTCGAAAAACTT 60.142 41.667 27.06 14.39 0.00 2.66
731 732 3.377172 CCAGACCTGTTGTTCGAAAAACT 59.623 43.478 27.06 11.26 0.00 2.66
732 733 3.691498 CCAGACCTGTTGTTCGAAAAAC 58.309 45.455 21.94 21.94 0.00 2.43
733 734 2.098443 GCCAGACCTGTTGTTCGAAAAA 59.902 45.455 0.00 0.00 0.00 1.94
734 735 1.673920 GCCAGACCTGTTGTTCGAAAA 59.326 47.619 0.00 0.00 0.00 2.29
735 736 1.305201 GCCAGACCTGTTGTTCGAAA 58.695 50.000 0.00 0.00 0.00 3.46
736 737 0.534203 GGCCAGACCTGTTGTTCGAA 60.534 55.000 0.00 0.00 34.51 3.71
737 738 1.070786 GGCCAGACCTGTTGTTCGA 59.929 57.895 0.00 0.00 34.51 3.71
738 739 3.655481 GGCCAGACCTGTTGTTCG 58.345 61.111 0.00 0.00 34.51 3.95
747 748 2.435059 GAACAGCGAGGCCAGACC 60.435 66.667 5.01 0.00 39.61 3.85
748 749 2.435059 GGAACAGCGAGGCCAGAC 60.435 66.667 5.01 0.00 0.00 3.51
749 750 4.069232 CGGAACAGCGAGGCCAGA 62.069 66.667 5.01 0.00 0.00 3.86
750 751 4.379243 ACGGAACAGCGAGGCCAG 62.379 66.667 5.01 0.00 0.00 4.85
751 752 4.373116 GACGGAACAGCGAGGCCA 62.373 66.667 5.01 0.00 0.00 5.36
754 755 3.569049 AACGGACGGAACAGCGAGG 62.569 63.158 0.00 0.00 0.00 4.63
755 756 1.219522 AAAACGGACGGAACAGCGAG 61.220 55.000 0.00 0.00 0.00 5.03
756 757 0.810823 AAAAACGGACGGAACAGCGA 60.811 50.000 0.00 0.00 0.00 4.93
757 758 1.644913 AAAAACGGACGGAACAGCG 59.355 52.632 0.00 0.00 0.00 5.18
773 774 4.456566 GTGAGTTCCGCCCAATACTAAAAA 59.543 41.667 0.00 0.00 0.00 1.94
774 775 4.004982 GTGAGTTCCGCCCAATACTAAAA 58.995 43.478 0.00 0.00 0.00 1.52
775 776 3.262405 AGTGAGTTCCGCCCAATACTAAA 59.738 43.478 0.00 0.00 0.00 1.85
776 777 2.835764 AGTGAGTTCCGCCCAATACTAA 59.164 45.455 0.00 0.00 0.00 2.24
777 778 2.167693 CAGTGAGTTCCGCCCAATACTA 59.832 50.000 0.00 0.00 0.00 1.82
778 779 1.066143 CAGTGAGTTCCGCCCAATACT 60.066 52.381 0.00 0.00 0.00 2.12
779 780 1.369625 CAGTGAGTTCCGCCCAATAC 58.630 55.000 0.00 0.00 0.00 1.89
780 781 0.251916 CCAGTGAGTTCCGCCCAATA 59.748 55.000 0.00 0.00 0.00 1.90
781 782 1.002134 CCAGTGAGTTCCGCCCAAT 60.002 57.895 0.00 0.00 0.00 3.16
782 783 2.111999 CTCCAGTGAGTTCCGCCCAA 62.112 60.000 0.00 0.00 33.70 4.12
783 784 2.525629 TCCAGTGAGTTCCGCCCA 60.526 61.111 0.00 0.00 0.00 5.36
784 785 2.266055 CTCCAGTGAGTTCCGCCC 59.734 66.667 0.00 0.00 33.70 6.13
795 796 1.073199 CGGGCCTTCAAACTCCAGT 59.927 57.895 0.84 0.00 0.00 4.00
851 852 4.980805 GACAGTTGGGCGGCGTCA 62.981 66.667 15.59 7.46 0.00 4.35
852 853 4.681978 AGACAGTTGGGCGGCGTC 62.682 66.667 9.37 5.57 0.00 5.19
853 854 2.386064 TAAAGACAGTTGGGCGGCGT 62.386 55.000 9.37 0.00 0.00 5.68
854 855 1.635663 CTAAAGACAGTTGGGCGGCG 61.636 60.000 0.51 0.51 0.00 6.46
857 879 1.156736 CACCTAAAGACAGTTGGGCG 58.843 55.000 0.00 0.00 32.53 6.13
868 890 0.461961 CCGCTCTCCCTCACCTAAAG 59.538 60.000 0.00 0.00 0.00 1.85
881 905 2.269241 GCTTAGTTGGGCCGCTCT 59.731 61.111 0.00 0.00 0.00 4.09
908 932 2.096819 CGCTCTCTCTCCACTCTAACAC 59.903 54.545 0.00 0.00 0.00 3.32
989 1038 1.149101 GATTTCCATGGCTCCCCCTA 58.851 55.000 6.96 0.00 0.00 3.53
1048 1097 1.979693 GGTCCACCAGCTCGACTCT 60.980 63.158 0.00 0.00 35.64 3.24
1051 1100 2.574399 GAGGTCCACCAGCTCGAC 59.426 66.667 0.00 0.00 39.82 4.20
1089 1138 1.984321 GAGAGAGACGACGCACCTCC 61.984 65.000 0.00 0.00 0.00 4.30
1095 1144 2.101380 GGCAGAGAGAGACGACGC 59.899 66.667 0.00 0.00 0.00 5.19
1100 1149 1.446966 GCGTTGGGCAGAGAGAGAC 60.447 63.158 0.00 0.00 42.87 3.36
1109 1158 1.959226 GAAAGAGACGCGTTGGGCA 60.959 57.895 15.53 0.00 43.84 5.36
1122 1171 2.175078 CGCGAGGTCGACGAAAGA 59.825 61.111 9.92 0.00 43.02 2.52
1176 1225 3.135994 GCACCTCGAACCAGAGTAAAAA 58.864 45.455 0.00 0.00 36.56 1.94
1233 1282 0.759436 ATCCAGCCGAATCCCGTACT 60.759 55.000 0.00 0.00 36.31 2.73
1238 1287 0.108585 TAGCAATCCAGCCGAATCCC 59.891 55.000 0.00 0.00 34.23 3.85
1277 1326 0.249398 ACCGAATCCCACCGAAGAAG 59.751 55.000 0.00 0.00 0.00 2.85
1283 1334 4.526770 GGTTACCGAATCCCACCG 57.473 61.111 0.00 0.00 0.00 4.94
1536 1587 0.537143 AATTGCTGGCCTCACACGAA 60.537 50.000 3.32 0.00 0.00 3.85
1537 1588 0.537143 AAATTGCTGGCCTCACACGA 60.537 50.000 3.32 0.00 0.00 4.35
1538 1589 1.164411 TAAATTGCTGGCCTCACACG 58.836 50.000 3.32 0.00 0.00 4.49
1539 1590 3.874392 AATAAATTGCTGGCCTCACAC 57.126 42.857 3.32 0.00 0.00 3.82
1540 1591 4.527816 AGAAAATAAATTGCTGGCCTCACA 59.472 37.500 3.32 0.00 0.00 3.58
1541 1592 5.077134 AGAAAATAAATTGCTGGCCTCAC 57.923 39.130 3.32 0.00 0.00 3.51
1542 1593 7.422465 AATAGAAAATAAATTGCTGGCCTCA 57.578 32.000 3.32 0.00 0.00 3.86
1543 1594 6.638468 CGAATAGAAAATAAATTGCTGGCCTC 59.362 38.462 3.32 0.00 0.00 4.70
1544 1595 6.321181 TCGAATAGAAAATAAATTGCTGGCCT 59.679 34.615 3.32 0.00 0.00 5.19
1563 1614 3.942115 TGCGAAATGGTTGGAATCGAATA 59.058 39.130 0.00 0.00 35.65 1.75
1608 1672 8.313944 TCAGTAGAAAGTTAGCCCATACATAA 57.686 34.615 0.00 0.00 0.00 1.90
1752 1833 2.030805 GCATCAAAGGGAATCATACCGC 60.031 50.000 0.00 0.00 0.00 5.68
1856 1937 3.767131 GCCTAAAGTGCCATTAAGGGAAA 59.233 43.478 11.08 0.00 40.60 3.13
1889 1970 5.295292 GTGATACACCTGAACATCTGGAATG 59.705 44.000 9.87 2.27 37.65 2.67
2084 2173 7.627298 ACAGAATTCATTGATTCAGGAAGAG 57.373 36.000 8.44 2.86 38.27 2.85
2297 2387 1.213678 TGAGAAGCCTTAGCCATGCAT 59.786 47.619 0.00 0.00 41.25 3.96
2337 2427 4.672899 AGAACTTTGGGCATTTTAGGCTA 58.327 39.130 0.00 0.00 0.00 3.93
2338 2428 3.510459 AGAACTTTGGGCATTTTAGGCT 58.490 40.909 0.00 0.00 0.00 4.58
2361 2451 2.171448 ACAGAAGGCAGGATACATGGTC 59.829 50.000 0.00 0.00 41.41 4.02
2396 2486 9.355916 AGTGACAGCTATACAGAATATAGTGAA 57.644 33.333 0.00 0.00 31.82 3.18
2464 2558 7.781548 TCATGTCTTCATACAATGAGATGTG 57.218 36.000 0.00 0.00 40.94 3.21
2465 2559 8.045507 ACTTCATGTCTTCATACAATGAGATGT 58.954 33.333 0.00 0.00 40.94 3.06
2654 3054 5.069251 CCTCTACCTCGTGATTAAACTGGAT 59.931 44.000 0.00 0.00 0.00 3.41
2915 3315 1.492176 CCATGTAGATGCCTCCCACTT 59.508 52.381 0.00 0.00 0.00 3.16
2972 3372 2.092103 CGGGATGGTTATGGAGGGAAAA 60.092 50.000 0.00 0.00 0.00 2.29
3242 4034 7.756395 ATGATTAGTCAAGGCTATGGAAATG 57.244 36.000 0.00 0.00 38.01 2.32
3307 4289 1.265095 CATTGCCACTGCGTATGATCC 59.735 52.381 0.00 0.00 41.78 3.36
3311 4293 1.085893 TGTCATTGCCACTGCGTATG 58.914 50.000 0.00 0.00 41.78 2.39
3743 4725 8.429237 AGGGAGATAAGAGTCGAAATGATATT 57.571 34.615 0.00 0.00 0.00 1.28
4154 5136 1.767088 TCTCTGATCATTCTGCCCCAG 59.233 52.381 0.00 0.00 0.00 4.45
4199 5181 3.779183 TCAGGATCCAGAGAGAAAATGCT 59.221 43.478 15.82 0.00 0.00 3.79
4303 5285 3.981071 AATTCGATGACCACCTCTTCA 57.019 42.857 0.00 0.00 0.00 3.02
4341 5323 9.994432 CTTCCAATGTTAACATATTGAGAAGAC 57.006 33.333 25.95 0.00 39.97 3.01
4502 5484 3.953201 AAGCAACACTTGAAGCAGC 57.047 47.368 0.00 0.00 37.17 5.25
4922 5904 2.156098 GGAGCTCTGTAGATACCCGAG 58.844 57.143 14.64 3.38 0.00 4.63
4984 5966 2.772930 ACAGGAAGACCTATTACCCCC 58.227 52.381 0.00 0.00 45.94 5.40
5105 6087 5.046807 GGGGCTATAGTCCTTTATTTCGCTA 60.047 44.000 22.52 0.00 40.38 4.26
5276 6258 5.619220 AGTTTCTCCATCTGATAGAATGCC 58.381 41.667 4.23 0.00 0.00 4.40
5319 6301 7.714813 TGAATTGTCAGAACTAGACATGAACAA 59.285 33.333 0.00 0.52 44.66 2.83
5537 6519 3.194755 TCCAGAGCTGCGTAAAAGATGTA 59.805 43.478 0.00 0.00 0.00 2.29
5702 6684 3.650942 TCCCCTCTGAAACTAGAAAGCAA 59.349 43.478 0.00 0.00 0.00 3.91
5895 6877 7.278135 AGCTCTGCTGAATCAGTTTCATATAA 58.722 34.615 12.29 0.00 43.30 0.98
5897 6879 5.682659 AGCTCTGCTGAATCAGTTTCATAT 58.317 37.500 12.29 0.00 43.30 1.78
5898 6880 5.095145 AGCTCTGCTGAATCAGTTTCATA 57.905 39.130 12.29 0.00 43.30 2.15
5969 6951 4.935702 TGTCAGAGAAACTTGCAATTTGG 58.064 39.130 0.00 0.00 0.00 3.28
6068 7051 9.202273 CATTACAATTAGCTGTTTTGCCTTAAA 57.798 29.630 0.00 0.00 0.00 1.52
6077 7060 5.371115 ACGTGCATTACAATTAGCTGTTT 57.629 34.783 0.00 0.00 0.00 2.83
6141 7124 9.896645 ACCCAGTAGCATATCAAGATATAAATG 57.103 33.333 2.46 2.41 33.01 2.32
6288 7271 3.334691 GACGGAACATTCACTTCATCCA 58.665 45.455 0.00 0.00 0.00 3.41
6310 7293 3.430895 GCCTGTTTCAAGCAACATTGATG 59.569 43.478 0.00 0.00 38.90 3.07
6457 7440 7.334858 ACTCTAAGAATTGGAAACAGAGGATC 58.665 38.462 0.00 0.00 44.54 3.36
6597 7581 6.381801 AGCTTTTGATACCTTGTTGAAATCG 58.618 36.000 0.00 0.00 0.00 3.34
6778 7769 7.391620 CCTTTCCCACAAAACAGATACTAGTA 58.608 38.462 4.77 4.77 0.00 1.82
6779 7770 6.238648 CCTTTCCCACAAAACAGATACTAGT 58.761 40.000 0.00 0.00 0.00 2.57
6780 7771 5.123979 GCCTTTCCCACAAAACAGATACTAG 59.876 44.000 0.00 0.00 0.00 2.57
6902 7893 1.832167 GGCTTTGCCTGGTCAACCA 60.832 57.895 1.20 1.20 46.69 3.67
6976 7968 3.933861 ACTGAAGGAAGAACCAAGTGT 57.066 42.857 0.00 0.00 42.04 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.