Multiple sequence alignment - TraesCS4D01G305900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G305900 chr4D 100.000 6914 0 0 1 6914 474438231 474431318 0.000000e+00 12768.0
1 TraesCS4D01G305900 chr4D 97.696 217 2 1 6698 6914 474420288 474420075 3.050000e-98 370.0
2 TraesCS4D01G305900 chr4D 96.313 217 5 2 6698 6914 318227676 318227889 3.070000e-93 353.0
3 TraesCS4D01G305900 chr4D 95.853 217 8 1 6698 6914 458176392 458176607 3.970000e-92 350.0
4 TraesCS4D01G305900 chr4D 91.736 121 8 2 6146 6265 19906684 19906565 4.290000e-37 167.0
5 TraesCS4D01G305900 chr4B 93.773 5781 213 60 1 5703 597976024 597970313 0.000000e+00 8545.0
6 TraesCS4D01G305900 chr4B 94.128 562 20 9 5770 6330 597970314 597969765 0.000000e+00 843.0
7 TraesCS4D01G305900 chr4B 92.683 82 6 0 6516 6597 597969690 597969609 1.220000e-22 119.0
8 TraesCS4D01G305900 chr4B 98.276 58 1 0 6615 6672 597969529 597969472 1.230000e-17 102.0
9 TraesCS4D01G305900 chr4A 92.682 3143 128 43 1095 4195 681716476 681719558 0.000000e+00 4436.0
10 TraesCS4D01G305900 chr4A 96.309 867 27 4 4771 5636 681720386 681721248 0.000000e+00 1419.0
11 TraesCS4D01G305900 chr4A 89.173 859 45 14 1 841 681715127 681715955 0.000000e+00 1027.0
12 TraesCS4D01G305900 chr4A 92.977 598 26 7 4192 4783 681719696 681720283 0.000000e+00 857.0
13 TraesCS4D01G305900 chr4A 94.196 448 17 4 5679 6126 681721343 681721781 0.000000e+00 675.0
14 TraesCS4D01G305900 chr4A 98.361 61 1 0 5679 5739 681721253 681721313 2.640000e-19 108.0
15 TraesCS4D01G305900 chr7D 96.313 217 5 1 6698 6914 314565715 314565928 3.070000e-93 353.0
16 TraesCS4D01G305900 chr1D 95.890 219 5 2 6697 6914 429931603 429931818 1.100000e-92 351.0
17 TraesCS4D01G305900 chr1D 91.406 128 6 3 6141 6265 51825957 51826082 3.320000e-38 171.0
18 TraesCS4D01G305900 chr1D 91.228 114 10 0 3249 3362 199597494 199597607 9.290000e-34 156.0
19 TraesCS4D01G305900 chr6D 95.089 224 6 3 6693 6914 57621597 57621377 1.430000e-91 348.0
20 TraesCS4D01G305900 chr6D 95.853 217 6 1 6698 6914 120959034 120958821 1.430000e-91 348.0
21 TraesCS4D01G305900 chr6D 95.853 217 6 1 6698 6914 171220082 171220295 1.430000e-91 348.0
22 TraesCS4D01G305900 chr6D 95.853 217 6 1 6698 6914 424583532 424583745 1.430000e-91 348.0
23 TraesCS4D01G305900 chrUn 91.406 128 8 2 6141 6265 379172017 379172144 9.220000e-39 172.0
24 TraesCS4D01G305900 chrUn 92.562 121 8 1 6146 6265 422744457 422744337 9.220000e-39 172.0
25 TraesCS4D01G305900 chrUn 91.406 128 8 2 6141 6265 424637930 424638057 9.220000e-39 172.0
26 TraesCS4D01G305900 chr3A 91.406 128 8 2 6141 6265 105550953 105551080 9.220000e-39 172.0
27 TraesCS4D01G305900 chr2B 92.562 121 8 1 6146 6265 683734395 683734275 9.220000e-39 172.0
28 TraesCS4D01G305900 chr1B 92.562 121 8 1 6146 6265 633722994 633722874 9.220000e-39 172.0
29 TraesCS4D01G305900 chr1B 92.105 114 9 0 3249 3362 280164743 280164856 2.000000e-35 161.0
30 TraesCS4D01G305900 chr1A 92.982 114 8 0 3249 3362 251338651 251338764 4.290000e-37 167.0
31 TraesCS4D01G305900 chr1A 97.959 49 1 0 1242 1290 251334800 251334848 1.240000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G305900 chr4D 474431318 474438231 6913 True 12768.000000 12768 100.000000 1 6914 1 chr4D.!!$R3 6913
1 TraesCS4D01G305900 chr4B 597969472 597976024 6552 True 2402.250000 8545 94.715000 1 6672 4 chr4B.!!$R1 6671
2 TraesCS4D01G305900 chr4A 681715127 681721781 6654 False 1420.333333 4436 93.949667 1 6126 6 chr4A.!!$F1 6125


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 1280 1.128809 TTCCTCCCAAAGCCCACGTA 61.129 55.000 0.00 0.00 0.00 3.57 F
1380 1738 0.029300 CCTGTTTGGTTGTGTGCGAG 59.971 55.000 0.00 0.00 0.00 5.03 F
1467 1825 0.329596 AGCAGATTGTCCTGGTTCCC 59.670 55.000 0.00 0.00 41.58 3.97 F
1724 2096 1.285280 TGACTATGGGTCCCAAGGTG 58.715 55.000 16.55 7.91 43.89 4.00 F
3102 3504 0.113190 AGAAGGTTGGCAAAGAGGGG 59.887 55.000 0.00 0.00 0.00 4.79 F
3235 3637 0.453793 CGTCCTTCTGAGATGCTCGT 59.546 55.000 0.00 0.00 32.35 4.18 F
3236 3638 1.135257 CGTCCTTCTGAGATGCTCGTT 60.135 52.381 0.00 0.00 32.35 3.85 F
4709 5267 1.134371 AGGAAAAGATACAGGAGCGGC 60.134 52.381 0.00 0.00 0.00 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2048 2421 2.693797 AATTTCTGCAGTTCTGCACG 57.306 45.000 21.30 16.90 40.23 5.34 R
2902 3300 3.510388 TCCTCAGACGTGTTGATCATC 57.490 47.619 0.00 0.00 0.00 2.92 R
2958 3356 4.634012 AGTAACAAACACAGGATGCCTA 57.366 40.909 0.00 0.00 42.53 3.93 R
3236 3638 9.391006 GAGTGTTACCATCCTATTAAATGTTCA 57.609 33.333 0.00 0.00 0.00 3.18 R
4340 4896 0.305922 GCATGCCACGTAGATTCAGC 59.694 55.000 6.36 0.00 0.00 4.26 R
4709 5267 0.316204 CCACCAGAAAGCTTTGCCAG 59.684 55.000 18.30 5.04 0.00 4.85 R
4784 5460 6.992123 TGACAAGTAATCAATAGCACCATAGG 59.008 38.462 0.00 0.00 0.00 2.57 R
6694 7487 0.035820 GGCCATTTACTCCGACACCA 60.036 55.000 0.00 0.00 0.00 4.17 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
150 151 5.776744 ACACGTAAGGAAACTAATCGTTCT 58.223 37.500 0.00 0.00 42.68 3.01
353 368 1.415659 CAAATTGTTCAAGGGGGCACA 59.584 47.619 0.00 0.00 0.00 4.57
395 410 3.976793 ACATCAGCAACACTTCAACAG 57.023 42.857 0.00 0.00 0.00 3.16
431 448 7.609146 ATGAATAATCAGTACATGGCACATAGG 59.391 37.037 0.00 0.00 40.99 2.57
450 467 6.655003 ACATAGGTTTAGTCATGAACAGGTTG 59.345 38.462 0.00 0.00 0.00 3.77
463 480 4.025401 GGTTGAGTTGGCACGCCG 62.025 66.667 3.13 0.00 39.42 6.46
493 513 3.553511 GGACATGAACAACGCATCTAGAG 59.446 47.826 0.00 0.00 0.00 2.43
679 704 2.587247 GGAGCACTCACTGGCCTGA 61.587 63.158 17.64 5.48 0.00 3.86
853 887 1.688735 CGATCCCCACTTCTGCAGATA 59.311 52.381 19.04 7.79 0.00 1.98
863 897 4.098501 CACTTCTGCAGATATTTTTCCCCC 59.901 45.833 19.04 0.00 0.00 5.40
864 898 4.017130 ACTTCTGCAGATATTTTTCCCCCT 60.017 41.667 19.04 0.00 0.00 4.79
865 899 4.170468 TCTGCAGATATTTTTCCCCCTC 57.830 45.455 13.74 0.00 0.00 4.30
866 900 3.527253 TCTGCAGATATTTTTCCCCCTCA 59.473 43.478 13.74 0.00 0.00 3.86
867 901 3.631250 TGCAGATATTTTTCCCCCTCAC 58.369 45.455 0.00 0.00 0.00 3.51
868 902 3.269381 TGCAGATATTTTTCCCCCTCACT 59.731 43.478 0.00 0.00 0.00 3.41
869 903 3.885901 GCAGATATTTTTCCCCCTCACTC 59.114 47.826 0.00 0.00 0.00 3.51
870 904 4.464947 CAGATATTTTTCCCCCTCACTCC 58.535 47.826 0.00 0.00 0.00 3.85
871 905 3.463704 AGATATTTTTCCCCCTCACTCCC 59.536 47.826 0.00 0.00 0.00 4.30
875 909 3.618855 TTCCCCCTCACTCCCCTCG 62.619 68.421 0.00 0.00 0.00 4.63
937 1280 1.128809 TTCCTCCCAAAGCCCACGTA 61.129 55.000 0.00 0.00 0.00 3.57
1178 1523 4.292178 CTCGCCGCCTCCATCCTC 62.292 72.222 0.00 0.00 0.00 3.71
1181 1526 4.554036 GCCGCCTCCATCCTCACC 62.554 72.222 0.00 0.00 0.00 4.02
1185 1530 2.374342 CCTCCATCCTCACCCCCT 59.626 66.667 0.00 0.00 0.00 4.79
1187 1532 1.768077 CTCCATCCTCACCCCCTCC 60.768 68.421 0.00 0.00 0.00 4.30
1188 1533 2.774351 CCATCCTCACCCCCTCCC 60.774 72.222 0.00 0.00 0.00 4.30
1189 1534 2.042762 CATCCTCACCCCCTCCCA 59.957 66.667 0.00 0.00 0.00 4.37
1190 1535 2.074948 CATCCTCACCCCCTCCCAG 61.075 68.421 0.00 0.00 0.00 4.45
1191 1536 4.741239 TCCTCACCCCCTCCCAGC 62.741 72.222 0.00 0.00 0.00 4.85
1193 1538 3.406200 CTCACCCCCTCCCAGCAG 61.406 72.222 0.00 0.00 0.00 4.24
1201 1546 2.422231 CCTCCCAGCAGAGAGACCG 61.422 68.421 0.38 0.00 35.82 4.79
1205 1550 4.504916 CAGCAGAGAGACCGCCCG 62.505 72.222 0.00 0.00 0.00 6.13
1216 1561 4.830765 CCGCCCGCGAGATCCAAA 62.831 66.667 8.23 0.00 42.83 3.28
1217 1562 3.564027 CGCCCGCGAGATCCAAAC 61.564 66.667 8.23 0.00 42.83 2.93
1218 1563 2.435938 GCCCGCGAGATCCAAACA 60.436 61.111 8.23 0.00 0.00 2.83
1219 1564 2.464459 GCCCGCGAGATCCAAACAG 61.464 63.158 8.23 0.00 0.00 3.16
1220 1565 1.079127 CCCGCGAGATCCAAACAGT 60.079 57.895 8.23 0.00 0.00 3.55
1221 1566 1.084370 CCCGCGAGATCCAAACAGTC 61.084 60.000 8.23 0.00 0.00 3.51
1222 1567 1.413767 CCGCGAGATCCAAACAGTCG 61.414 60.000 8.23 0.00 0.00 4.18
1224 1569 2.373938 CGAGATCCAAACAGTCGCC 58.626 57.895 0.00 0.00 0.00 5.54
1225 1570 0.108615 CGAGATCCAAACAGTCGCCT 60.109 55.000 0.00 0.00 0.00 5.52
1226 1571 1.646189 GAGATCCAAACAGTCGCCTC 58.354 55.000 0.00 0.00 0.00 4.70
1227 1572 0.250513 AGATCCAAACAGTCGCCTCC 59.749 55.000 0.00 0.00 0.00 4.30
1228 1573 0.744771 GATCCAAACAGTCGCCTCCC 60.745 60.000 0.00 0.00 0.00 4.30
1229 1574 1.201429 ATCCAAACAGTCGCCTCCCT 61.201 55.000 0.00 0.00 0.00 4.20
1230 1575 1.376037 CCAAACAGTCGCCTCCCTC 60.376 63.158 0.00 0.00 0.00 4.30
1332 1685 1.541672 CCTCTCTCCCTCCCTCTCC 59.458 68.421 0.00 0.00 0.00 3.71
1369 1727 2.282887 CCGGGGGTTCCTGTTTGG 60.283 66.667 0.00 0.00 37.74 3.28
1380 1738 0.029300 CCTGTTTGGTTGTGTGCGAG 59.971 55.000 0.00 0.00 0.00 5.03
1467 1825 0.329596 AGCAGATTGTCCTGGTTCCC 59.670 55.000 0.00 0.00 41.58 3.97
1476 1834 2.354729 CTGGTTCCCCGCCAATCA 59.645 61.111 0.00 0.00 35.32 2.57
1566 1924 5.227152 GTTTTTGTTTCTGTCCTTGTGTGT 58.773 37.500 0.00 0.00 0.00 3.72
1568 1926 4.433186 TTGTTTCTGTCCTTGTGTGTTG 57.567 40.909 0.00 0.00 0.00 3.33
1724 2096 1.285280 TGACTATGGGTCCCAAGGTG 58.715 55.000 16.55 7.91 43.89 4.00
1784 2156 1.532868 GTGCGAGTGTCTGAATTGCTT 59.467 47.619 0.00 0.00 0.00 3.91
1810 2182 3.944015 AGATTGTAAGATTGTGGCTGCTC 59.056 43.478 0.00 0.00 0.00 4.26
1843 2215 7.709947 CAAACCATGTTGCTATCACATCTATT 58.290 34.615 0.00 0.00 0.00 1.73
1844 2216 7.502120 AACCATGTTGCTATCACATCTATTC 57.498 36.000 0.00 0.00 0.00 1.75
1845 2217 6.000219 ACCATGTTGCTATCACATCTATTCC 59.000 40.000 0.00 0.00 0.00 3.01
1885 2257 3.095912 TGCTAGACTAGTGGTTGGCTA 57.904 47.619 11.15 0.00 0.00 3.93
2345 2727 6.320494 TGCACATACGTTTTAATGGACTTT 57.680 33.333 0.00 0.00 0.00 2.66
2483 2865 6.646240 TCTCCATGTTGCTTATTTTCTTTTGC 59.354 34.615 0.00 0.00 0.00 3.68
2484 2866 6.286758 TCCATGTTGCTTATTTTCTTTTGCA 58.713 32.000 0.00 0.00 0.00 4.08
2486 2868 6.203338 CCATGTTGCTTATTTTCTTTTGCAGT 59.797 34.615 0.00 0.00 0.00 4.40
2543 2932 8.495148 GCTATGAACTGGGTTTTAATTGTTTTG 58.505 33.333 0.00 0.00 0.00 2.44
2958 3356 4.099633 TCTCCTGACCATCAATTCTCAGT 58.900 43.478 0.00 0.00 0.00 3.41
2992 3390 7.526608 TGTGTTTGTTACTTTGTTCTCTTCTG 58.473 34.615 0.00 0.00 0.00 3.02
2993 3391 7.389330 TGTGTTTGTTACTTTGTTCTCTTCTGA 59.611 33.333 0.00 0.00 0.00 3.27
2994 3392 7.905493 GTGTTTGTTACTTTGTTCTCTTCTGAG 59.095 37.037 0.00 0.00 41.51 3.35
2995 3393 7.822334 TGTTTGTTACTTTGTTCTCTTCTGAGA 59.178 33.333 0.00 0.00 46.58 3.27
3102 3504 0.113190 AGAAGGTTGGCAAAGAGGGG 59.887 55.000 0.00 0.00 0.00 4.79
3235 3637 0.453793 CGTCCTTCTGAGATGCTCGT 59.546 55.000 0.00 0.00 32.35 4.18
3236 3638 1.135257 CGTCCTTCTGAGATGCTCGTT 60.135 52.381 0.00 0.00 32.35 3.85
3237 3639 2.266554 GTCCTTCTGAGATGCTCGTTG 58.733 52.381 0.00 0.00 32.35 4.10
3245 3647 5.478407 TCTGAGATGCTCGTTGAACATTTA 58.522 37.500 0.00 0.00 32.35 1.40
3315 3717 4.973168 TGAAGCTTGACAGAGGTTACATT 58.027 39.130 2.10 0.00 37.48 2.71
3571 3978 7.066887 TGTCTCTTTCTGTTTTGTTATTGCTCA 59.933 33.333 0.00 0.00 0.00 4.26
3768 4175 6.915786 AGGATTTAATTCATCTTACTGGGCT 58.084 36.000 0.20 0.00 0.00 5.19
3787 4194 1.884579 CTTGAAATGCAGGTCTGTGCT 59.115 47.619 0.00 0.00 44.32 4.40
3918 4325 6.128715 CCATTTCACAGTATCGTATCAGATGC 60.129 42.308 0.00 0.00 34.15 3.91
3919 4326 4.147219 TCACAGTATCGTATCAGATGCG 57.853 45.455 14.25 14.25 38.11 4.73
4046 4453 3.390135 TGCAAGAAGGTAAGACACTTCG 58.610 45.455 0.00 0.00 45.83 3.79
4061 4468 2.033299 CACTTCGCTTGTGTTGGATTGT 59.967 45.455 0.00 0.00 0.00 2.71
4062 4469 3.249799 CACTTCGCTTGTGTTGGATTGTA 59.750 43.478 0.00 0.00 0.00 2.41
4132 4539 8.739972 CAAAAACTACCTTGCTGGAAAGTATAT 58.260 33.333 3.40 0.00 39.71 0.86
4340 4896 7.906160 TGTTTTTAGAACTTCTCGAAACTCTG 58.094 34.615 20.01 0.00 34.87 3.35
4346 4902 4.264460 ACTTCTCGAAACTCTGCTGAAT 57.736 40.909 0.00 0.00 0.00 2.57
4350 4906 4.987832 TCTCGAAACTCTGCTGAATCTAC 58.012 43.478 0.00 0.00 0.00 2.59
4372 4928 3.548668 CGTGGCATGCATTTAAACTGATG 59.451 43.478 21.36 0.00 0.00 3.07
4389 4945 1.674441 GATGCATTTGAGCTAGCTGCA 59.326 47.619 24.99 25.09 45.84 4.41
4394 4950 5.065235 TGCATTTGAGCTAGCTGCATAATA 58.935 37.500 24.99 0.14 45.94 0.98
4404 4960 8.682936 AGCTAGCTGCATAATAGTAAATTTGT 57.317 30.769 18.57 0.00 45.94 2.83
4405 4961 9.125026 AGCTAGCTGCATAATAGTAAATTTGTT 57.875 29.630 18.57 0.00 45.94 2.83
4709 5267 1.134371 AGGAAAAGATACAGGAGCGGC 60.134 52.381 0.00 0.00 0.00 6.53
4784 5460 9.582431 TCTATTAATCTGTGTAGCACTGTTAAC 57.418 33.333 0.00 0.00 35.37 2.01
5294 5972 6.183360 CCATGTCTTAAGCATAAAGAAGGGTG 60.183 42.308 10.70 0.11 34.86 4.61
5334 6012 1.656587 TTCTGCAGACCCCAGTACAT 58.343 50.000 18.03 0.00 0.00 2.29
5458 6136 4.114794 GCAAAGTTCATCTGTTGTTGCTT 58.885 39.130 0.00 0.00 37.49 3.91
5490 6168 6.183360 GCATTAGGACTTGGCTTAAATCATGT 60.183 38.462 0.00 0.00 0.00 3.21
5491 6169 7.631377 GCATTAGGACTTGGCTTAAATCATGTT 60.631 37.037 0.00 0.00 0.00 2.71
5724 6454 8.514330 TGAAGTTTCTGAAGCTTAAACCTTAA 57.486 30.769 17.68 4.90 34.39 1.85
5743 6473 8.212259 ACCTTAAAGGATAGCAGTGATGATAT 57.788 34.615 0.00 0.00 37.67 1.63
5748 6478 6.713762 AGGATAGCAGTGATGATATAGAGC 57.286 41.667 0.00 0.00 0.00 4.09
5749 6479 6.193504 AGGATAGCAGTGATGATATAGAGCA 58.806 40.000 0.00 0.00 0.00 4.26
5750 6480 6.840181 AGGATAGCAGTGATGATATAGAGCAT 59.160 38.462 0.00 0.00 33.30 3.79
5751 6481 7.014518 AGGATAGCAGTGATGATATAGAGCATC 59.985 40.741 8.63 8.63 46.64 3.91
5752 6482 5.341872 AGCAGTGATGATATAGAGCATCC 57.658 43.478 12.69 4.85 46.03 3.51
5753 6483 5.024785 AGCAGTGATGATATAGAGCATCCT 58.975 41.667 12.69 6.90 46.03 3.24
5754 6484 5.484644 AGCAGTGATGATATAGAGCATCCTT 59.515 40.000 12.69 0.00 46.03 3.36
5758 6488 8.095792 CAGTGATGATATAGAGCATCCTTCTTT 58.904 37.037 12.69 0.00 46.03 2.52
5760 6490 8.719648 GTGATGATATAGAGCATCCTTCTTTTG 58.280 37.037 12.69 0.00 46.03 2.44
5777 6507 7.874528 CCTTCTTTTGAGCCATGAAAATAGTTT 59.125 33.333 0.00 0.00 0.00 2.66
5778 6508 9.264719 CTTCTTTTGAGCCATGAAAATAGTTTT 57.735 29.630 0.00 0.00 35.12 2.43
5999 6729 1.560004 CGCGGATGTGGATTCATCGG 61.560 60.000 0.00 8.97 43.39 4.18
6006 6736 5.699001 CGGATGTGGATTCATCGGTATTTAA 59.301 40.000 0.00 0.00 43.39 1.52
6018 6748 7.510407 TCATCGGTATTTAATGTGGGTGAATA 58.490 34.615 0.00 0.00 0.00 1.75
6119 6850 2.715737 TGTTAACAAGCCCGAAATGC 57.284 45.000 5.64 0.00 0.00 3.56
6169 6900 3.301794 TGTTGCTATTCCTGCATCCAT 57.698 42.857 0.00 0.00 40.34 3.41
6170 6901 4.436113 TGTTGCTATTCCTGCATCCATA 57.564 40.909 0.00 0.00 40.34 2.74
6243 6974 1.146485 TTGGGACCGCTTTTGACGA 59.854 52.632 0.00 0.00 0.00 4.20
6303 7034 2.489938 TTATTGCTCCTCGGCAGTTT 57.510 45.000 0.00 0.00 43.39 2.66
6304 7035 3.620427 TTATTGCTCCTCGGCAGTTTA 57.380 42.857 0.00 0.00 43.39 2.01
6335 7066 3.891056 GGTTTGAACCTAGGTTTGTCG 57.109 47.619 27.72 0.00 45.75 4.35
6336 7067 2.031420 GGTTTGAACCTAGGTTTGTCGC 60.031 50.000 27.72 15.07 45.75 5.19
6337 7068 1.886886 TTGAACCTAGGTTTGTCGCC 58.113 50.000 27.72 14.37 38.60 5.54
6365 7096 3.105937 GACAAAACGTCTGCTTTGAACC 58.894 45.455 15.41 3.18 41.81 3.62
6366 7097 2.752903 ACAAAACGTCTGCTTTGAACCT 59.247 40.909 15.41 0.00 36.30 3.50
6367 7098 3.192633 ACAAAACGTCTGCTTTGAACCTT 59.807 39.130 15.41 0.00 36.30 3.50
6368 7099 3.420839 AAACGTCTGCTTTGAACCTTG 57.579 42.857 0.00 0.00 0.00 3.61
6369 7100 2.325583 ACGTCTGCTTTGAACCTTGA 57.674 45.000 0.00 0.00 0.00 3.02
6370 7101 1.940613 ACGTCTGCTTTGAACCTTGAC 59.059 47.619 0.00 0.00 0.00 3.18
6371 7102 1.939934 CGTCTGCTTTGAACCTTGACA 59.060 47.619 0.00 0.00 0.00 3.58
6372 7103 2.032549 CGTCTGCTTTGAACCTTGACAG 60.033 50.000 0.00 0.00 0.00 3.51
6373 7104 1.949525 TCTGCTTTGAACCTTGACAGC 59.050 47.619 0.00 0.00 0.00 4.40
6374 7105 1.677576 CTGCTTTGAACCTTGACAGCA 59.322 47.619 0.00 0.00 0.00 4.41
6375 7106 1.405105 TGCTTTGAACCTTGACAGCAC 59.595 47.619 0.00 0.00 0.00 4.40
6376 7107 1.405105 GCTTTGAACCTTGACAGCACA 59.595 47.619 0.00 0.00 0.00 4.57
6377 7108 2.159254 GCTTTGAACCTTGACAGCACAA 60.159 45.455 0.00 0.00 0.00 3.33
6378 7109 3.675775 GCTTTGAACCTTGACAGCACAAA 60.676 43.478 0.00 0.00 0.00 2.83
6379 7110 3.781079 TTGAACCTTGACAGCACAAAG 57.219 42.857 0.00 0.00 0.00 2.77
6380 7111 2.023673 TGAACCTTGACAGCACAAAGG 58.976 47.619 6.08 6.08 0.00 3.11
6381 7112 2.297701 GAACCTTGACAGCACAAAGGA 58.702 47.619 12.71 0.00 0.00 3.36
6382 7113 1.680338 ACCTTGACAGCACAAAGGAC 58.320 50.000 12.71 0.00 0.00 3.85
6394 7125 2.825532 CACAAAGGACGATTTGGGGATT 59.174 45.455 13.94 0.00 43.10 3.01
6428 7159 6.800072 TTTTTATTTGAGGGGTTCAACACT 57.200 33.333 0.00 0.00 45.22 3.55
6429 7160 6.399639 TTTTATTTGAGGGGTTCAACACTC 57.600 37.500 4.88 4.88 45.22 3.51
6435 7166 3.745723 GGGTTCAACACTCCACCAT 57.254 52.632 0.00 0.00 0.00 3.55
6436 7167 1.247567 GGGTTCAACACTCCACCATG 58.752 55.000 0.00 0.00 0.00 3.66
6437 7168 1.202879 GGGTTCAACACTCCACCATGA 60.203 52.381 0.00 0.00 0.00 3.07
6438 7169 2.555227 GGGTTCAACACTCCACCATGAT 60.555 50.000 0.00 0.00 0.00 2.45
6439 7170 3.157087 GGTTCAACACTCCACCATGATT 58.843 45.455 0.00 0.00 0.00 2.57
6440 7171 3.573967 GGTTCAACACTCCACCATGATTT 59.426 43.478 0.00 0.00 0.00 2.17
6441 7172 4.039124 GGTTCAACACTCCACCATGATTTT 59.961 41.667 0.00 0.00 0.00 1.82
6442 7173 5.242838 GGTTCAACACTCCACCATGATTTTA 59.757 40.000 0.00 0.00 0.00 1.52
6443 7174 6.239176 GGTTCAACACTCCACCATGATTTTAA 60.239 38.462 0.00 0.00 0.00 1.52
6444 7175 7.378181 GTTCAACACTCCACCATGATTTTAAT 58.622 34.615 0.00 0.00 0.00 1.40
6445 7176 7.537596 TCAACACTCCACCATGATTTTAATT 57.462 32.000 0.00 0.00 0.00 1.40
6446 7177 7.377398 TCAACACTCCACCATGATTTTAATTG 58.623 34.615 0.00 0.00 0.00 2.32
6447 7178 6.916360 ACACTCCACCATGATTTTAATTGT 57.084 33.333 0.00 0.00 0.00 2.71
6448 7179 6.690530 ACACTCCACCATGATTTTAATTGTG 58.309 36.000 0.00 0.00 0.00 3.33
6449 7180 6.101332 CACTCCACCATGATTTTAATTGTGG 58.899 40.000 0.00 0.00 42.39 4.17
6450 7181 5.779771 ACTCCACCATGATTTTAATTGTGGT 59.220 36.000 10.50 6.80 41.85 4.16
6451 7182 6.951198 ACTCCACCATGATTTTAATTGTGGTA 59.049 34.615 10.50 0.53 41.85 3.25
6452 7183 7.619302 ACTCCACCATGATTTTAATTGTGGTAT 59.381 33.333 10.50 0.66 41.85 2.73
6453 7184 8.372877 TCCACCATGATTTTAATTGTGGTATT 57.627 30.769 10.50 0.00 41.85 1.89
6454 7185 8.474025 TCCACCATGATTTTAATTGTGGTATTC 58.526 33.333 10.50 0.00 41.85 1.75
6455 7186 7.434897 CCACCATGATTTTAATTGTGGTATTCG 59.565 37.037 0.00 0.00 37.57 3.34
6456 7187 7.434897 CACCATGATTTTAATTGTGGTATTCGG 59.565 37.037 0.00 0.00 35.80 4.30
6457 7188 7.123547 ACCATGATTTTAATTGTGGTATTCGGT 59.876 33.333 0.00 0.00 35.80 4.69
6458 7189 7.434897 CCATGATTTTAATTGTGGTATTCGGTG 59.565 37.037 0.00 0.00 0.00 4.94
6459 7190 7.689446 TGATTTTAATTGTGGTATTCGGTGA 57.311 32.000 0.00 0.00 0.00 4.02
6460 7191 8.112016 TGATTTTAATTGTGGTATTCGGTGAA 57.888 30.769 0.00 0.00 0.00 3.18
6461 7192 8.577296 TGATTTTAATTGTGGTATTCGGTGAAA 58.423 29.630 0.00 0.00 0.00 2.69
6462 7193 9.581099 GATTTTAATTGTGGTATTCGGTGAAAT 57.419 29.630 0.00 0.00 0.00 2.17
6463 7194 8.973835 TTTTAATTGTGGTATTCGGTGAAATC 57.026 30.769 0.00 0.00 0.00 2.17
6464 7195 7.931578 TTAATTGTGGTATTCGGTGAAATCT 57.068 32.000 0.00 0.00 0.00 2.40
6465 7196 6.834168 AATTGTGGTATTCGGTGAAATCTT 57.166 33.333 0.00 0.00 0.00 2.40
6466 7197 6.834168 ATTGTGGTATTCGGTGAAATCTTT 57.166 33.333 0.00 0.00 0.00 2.52
6467 7198 5.873179 TGTGGTATTCGGTGAAATCTTTC 57.127 39.130 0.00 0.00 37.69 2.62
6468 7199 4.698304 TGTGGTATTCGGTGAAATCTTTCC 59.302 41.667 0.48 0.00 36.36 3.13
6469 7200 4.941873 GTGGTATTCGGTGAAATCTTTCCT 59.058 41.667 0.48 0.00 36.36 3.36
6470 7201 5.064834 GTGGTATTCGGTGAAATCTTTCCTC 59.935 44.000 0.48 0.00 36.36 3.71
6471 7202 5.045869 TGGTATTCGGTGAAATCTTTCCTCT 60.046 40.000 0.48 0.00 36.36 3.69
6472 7203 6.155565 TGGTATTCGGTGAAATCTTTCCTCTA 59.844 38.462 0.48 0.00 36.36 2.43
6473 7204 7.147549 TGGTATTCGGTGAAATCTTTCCTCTAT 60.148 37.037 0.48 0.00 36.36 1.98
6474 7205 8.365647 GGTATTCGGTGAAATCTTTCCTCTATA 58.634 37.037 0.48 0.00 36.36 1.31
6475 7206 9.760077 GTATTCGGTGAAATCTTTCCTCTATAA 57.240 33.333 0.48 0.00 36.36 0.98
6477 7208 8.888579 TTCGGTGAAATCTTTCCTCTATAATC 57.111 34.615 0.48 0.00 36.36 1.75
6478 7209 7.442656 TCGGTGAAATCTTTCCTCTATAATCC 58.557 38.462 0.48 0.00 36.36 3.01
6479 7210 6.651225 CGGTGAAATCTTTCCTCTATAATCCC 59.349 42.308 0.48 0.00 36.36 3.85
6480 7211 6.943146 GGTGAAATCTTTCCTCTATAATCCCC 59.057 42.308 0.48 0.00 36.36 4.81
6481 7212 6.943146 GTGAAATCTTTCCTCTATAATCCCCC 59.057 42.308 0.48 0.00 36.36 5.40
6499 7230 1.441695 CCCGAATTATAGGGGTGGGT 58.558 55.000 5.45 0.00 43.90 4.51
6500 7231 1.073284 CCCGAATTATAGGGGTGGGTG 59.927 57.143 5.45 0.00 43.90 4.61
6501 7232 1.073284 CCGAATTATAGGGGTGGGTGG 59.927 57.143 0.00 0.00 0.00 4.61
6502 7233 1.772453 CGAATTATAGGGGTGGGTGGT 59.228 52.381 0.00 0.00 0.00 4.16
6503 7234 2.173996 CGAATTATAGGGGTGGGTGGTT 59.826 50.000 0.00 0.00 0.00 3.67
6504 7235 3.391955 CGAATTATAGGGGTGGGTGGTTA 59.608 47.826 0.00 0.00 0.00 2.85
6505 7236 4.042435 CGAATTATAGGGGTGGGTGGTTAT 59.958 45.833 0.00 0.00 0.00 1.89
6506 7237 5.248934 CGAATTATAGGGGTGGGTGGTTATA 59.751 44.000 0.00 0.00 0.00 0.98
6507 7238 6.458630 AATTATAGGGGTGGGTGGTTATAC 57.541 41.667 0.00 0.00 0.00 1.47
6508 7239 3.738112 ATAGGGGTGGGTGGTTATACT 57.262 47.619 0.00 0.00 0.00 2.12
6509 7240 1.591768 AGGGGTGGGTGGTTATACTG 58.408 55.000 0.00 0.00 0.00 2.74
6510 7241 0.549469 GGGGTGGGTGGTTATACTGG 59.451 60.000 0.00 0.00 0.00 4.00
6511 7242 1.292085 GGGTGGGTGGTTATACTGGT 58.708 55.000 0.00 0.00 0.00 4.00
6512 7243 2.480390 GGGTGGGTGGTTATACTGGTA 58.520 52.381 0.00 0.00 0.00 3.25
6513 7244 2.845586 GGGTGGGTGGTTATACTGGTAA 59.154 50.000 0.00 0.00 0.00 2.85
6514 7245 3.370846 GGGTGGGTGGTTATACTGGTAAC 60.371 52.174 0.00 0.00 34.55 2.50
6566 7297 3.635836 TGAACATCAAGATGGTGCAAACA 59.364 39.130 14.04 0.00 39.18 2.83
6577 7308 2.107378 TGGTGCAAACATACCAGGAAGA 59.893 45.455 0.00 0.00 41.80 2.87
6584 7315 4.447138 AACATACCAGGAAGACCAACAA 57.553 40.909 0.00 0.00 38.94 2.83
6591 7322 3.428862 CCAGGAAGACCAACAACAACAAC 60.429 47.826 0.00 0.00 38.94 3.32
6593 7324 3.829601 AGGAAGACCAACAACAACAACAA 59.170 39.130 0.00 0.00 38.94 2.83
6605 7389 4.434713 ACAACAACAAAGCTTCGTTTCT 57.565 36.364 0.00 0.00 0.00 2.52
6676 7469 9.595823 TTCTTTTAGTGGATAGAAATAAGGACG 57.404 33.333 0.00 0.00 0.00 4.79
6677 7470 7.709613 TCTTTTAGTGGATAGAAATAAGGACGC 59.290 37.037 0.00 0.00 0.00 5.19
6678 7471 3.978687 AGTGGATAGAAATAAGGACGCG 58.021 45.455 3.53 3.53 0.00 6.01
6679 7472 3.383825 AGTGGATAGAAATAAGGACGCGT 59.616 43.478 13.85 13.85 0.00 6.01
6680 7473 3.734735 GTGGATAGAAATAAGGACGCGTC 59.265 47.826 30.67 30.67 0.00 5.19
6681 7474 3.635373 TGGATAGAAATAAGGACGCGTCT 59.365 43.478 35.50 21.43 0.00 4.18
6682 7475 4.823442 TGGATAGAAATAAGGACGCGTCTA 59.177 41.667 35.50 22.86 0.00 2.59
6683 7476 5.048921 TGGATAGAAATAAGGACGCGTCTAG 60.049 44.000 35.50 0.00 0.00 2.43
6684 7477 3.712091 AGAAATAAGGACGCGTCTAGG 57.288 47.619 35.50 0.00 0.00 3.02
6685 7478 2.361438 AGAAATAAGGACGCGTCTAGGG 59.639 50.000 35.50 0.00 38.93 3.53
6686 7479 2.062971 AATAAGGACGCGTCTAGGGA 57.937 50.000 35.50 18.44 36.53 4.20
6687 7480 1.606903 ATAAGGACGCGTCTAGGGAG 58.393 55.000 35.50 0.00 36.53 4.30
6688 7481 1.099879 TAAGGACGCGTCTAGGGAGC 61.100 60.000 35.50 18.86 36.53 4.70
6689 7482 3.138798 GGACGCGTCTAGGGAGCA 61.139 66.667 35.50 0.00 36.53 4.26
6690 7483 2.409651 GACGCGTCTAGGGAGCAG 59.590 66.667 31.12 0.00 36.53 4.24
6691 7484 3.759766 GACGCGTCTAGGGAGCAGC 62.760 68.421 31.12 0.67 36.53 5.25
6692 7485 4.577246 CGCGTCTAGGGAGCAGCC 62.577 72.222 0.00 0.00 34.27 4.85
6701 7494 4.767255 GGAGCAGCCCTGGTGTCG 62.767 72.222 4.52 0.00 41.93 4.35
6702 7495 4.767255 GAGCAGCCCTGGTGTCGG 62.767 72.222 4.52 0.00 41.93 4.79
6704 7497 4.767255 GCAGCCCTGGTGTCGGAG 62.767 72.222 0.00 0.00 33.19 4.63
6705 7498 3.314331 CAGCCCTGGTGTCGGAGT 61.314 66.667 0.00 0.00 0.00 3.85
6706 7499 1.982395 CAGCCCTGGTGTCGGAGTA 60.982 63.158 0.00 0.00 0.00 2.59
6707 7500 1.229082 AGCCCTGGTGTCGGAGTAA 60.229 57.895 0.00 0.00 0.00 2.24
6708 7501 0.834687 AGCCCTGGTGTCGGAGTAAA 60.835 55.000 0.00 0.00 0.00 2.01
6709 7502 0.252197 GCCCTGGTGTCGGAGTAAAT 59.748 55.000 0.00 0.00 0.00 1.40
6710 7503 2.012051 GCCCTGGTGTCGGAGTAAATG 61.012 57.143 0.00 0.00 0.00 2.32
6711 7504 1.406887 CCCTGGTGTCGGAGTAAATGG 60.407 57.143 0.00 0.00 0.00 3.16
6712 7505 1.369625 CTGGTGTCGGAGTAAATGGC 58.630 55.000 0.00 0.00 0.00 4.40
6713 7506 0.035820 TGGTGTCGGAGTAAATGGCC 60.036 55.000 0.00 0.00 0.00 5.36
6714 7507 0.035820 GGTGTCGGAGTAAATGGCCA 60.036 55.000 8.56 8.56 0.00 5.36
6715 7508 1.084289 GTGTCGGAGTAAATGGCCAC 58.916 55.000 8.16 0.00 0.00 5.01
6716 7509 0.390603 TGTCGGAGTAAATGGCCACG 60.391 55.000 8.16 5.22 0.00 4.94
6717 7510 1.087771 GTCGGAGTAAATGGCCACGG 61.088 60.000 8.16 0.00 0.00 4.94
6718 7511 1.817941 CGGAGTAAATGGCCACGGG 60.818 63.158 8.16 0.00 0.00 5.28
6719 7512 1.301954 GGAGTAAATGGCCACGGGT 59.698 57.895 8.16 0.00 0.00 5.28
6720 7513 0.542805 GGAGTAAATGGCCACGGGTA 59.457 55.000 8.16 0.00 0.00 3.69
6721 7514 1.474498 GGAGTAAATGGCCACGGGTAG 60.474 57.143 8.16 0.00 0.00 3.18
6722 7515 0.107361 AGTAAATGGCCACGGGTAGC 60.107 55.000 8.16 0.00 0.00 3.58
6727 7520 3.237414 GGCCACGGGTAGCCTAAT 58.763 61.111 9.73 0.00 46.14 1.73
6728 7521 1.070957 GGCCACGGGTAGCCTAATC 59.929 63.158 9.73 0.00 46.14 1.75
6729 7522 1.300697 GCCACGGGTAGCCTAATCG 60.301 63.158 9.73 0.00 0.00 3.34
6730 7523 1.741327 GCCACGGGTAGCCTAATCGA 61.741 60.000 9.73 0.00 0.00 3.59
6731 7524 0.031721 CCACGGGTAGCCTAATCGAC 59.968 60.000 9.73 0.00 0.00 4.20
6732 7525 1.030457 CACGGGTAGCCTAATCGACT 58.970 55.000 9.73 0.00 0.00 4.18
6733 7526 2.224606 CACGGGTAGCCTAATCGACTA 58.775 52.381 9.73 0.00 0.00 2.59
6734 7527 2.031333 CACGGGTAGCCTAATCGACTAC 60.031 54.545 9.73 0.00 36.40 2.73
6737 7530 1.891811 GGTAGCCTAATCGACTACCCC 59.108 57.143 15.12 0.00 46.82 4.95
6738 7531 2.490535 GGTAGCCTAATCGACTACCCCT 60.491 54.545 15.12 0.00 46.82 4.79
6739 7532 1.705873 AGCCTAATCGACTACCCCTG 58.294 55.000 0.00 0.00 0.00 4.45
6740 7533 0.680061 GCCTAATCGACTACCCCTGG 59.320 60.000 0.00 0.00 0.00 4.45
6741 7534 0.680061 CCTAATCGACTACCCCTGGC 59.320 60.000 0.00 0.00 0.00 4.85
6742 7535 1.705873 CTAATCGACTACCCCTGGCT 58.294 55.000 0.00 0.00 0.00 4.75
6743 7536 1.614413 CTAATCGACTACCCCTGGCTC 59.386 57.143 0.00 0.00 0.00 4.70
6744 7537 0.032017 AATCGACTACCCCTGGCTCT 60.032 55.000 0.00 0.00 0.00 4.09
6745 7538 0.032017 ATCGACTACCCCTGGCTCTT 60.032 55.000 0.00 0.00 0.00 2.85
6746 7539 0.683504 TCGACTACCCCTGGCTCTTC 60.684 60.000 0.00 0.00 0.00 2.87
6747 7540 0.970937 CGACTACCCCTGGCTCTTCA 60.971 60.000 0.00 0.00 0.00 3.02
6748 7541 1.276622 GACTACCCCTGGCTCTTCAA 58.723 55.000 0.00 0.00 0.00 2.69
6749 7542 1.628846 GACTACCCCTGGCTCTTCAAA 59.371 52.381 0.00 0.00 0.00 2.69
6750 7543 2.039879 GACTACCCCTGGCTCTTCAAAA 59.960 50.000 0.00 0.00 0.00 2.44
6751 7544 2.445525 ACTACCCCTGGCTCTTCAAAAA 59.554 45.455 0.00 0.00 0.00 1.94
6752 7545 2.702270 ACCCCTGGCTCTTCAAAAAT 57.298 45.000 0.00 0.00 0.00 1.82
6753 7546 2.976440 ACCCCTGGCTCTTCAAAAATT 58.024 42.857 0.00 0.00 0.00 1.82
6754 7547 4.126520 ACCCCTGGCTCTTCAAAAATTA 57.873 40.909 0.00 0.00 0.00 1.40
6755 7548 4.687976 ACCCCTGGCTCTTCAAAAATTAT 58.312 39.130 0.00 0.00 0.00 1.28
6756 7549 4.711846 ACCCCTGGCTCTTCAAAAATTATC 59.288 41.667 0.00 0.00 0.00 1.75
6757 7550 4.711355 CCCCTGGCTCTTCAAAAATTATCA 59.289 41.667 0.00 0.00 0.00 2.15
6758 7551 5.163478 CCCCTGGCTCTTCAAAAATTATCAG 60.163 44.000 0.00 0.00 0.00 2.90
6759 7552 5.163478 CCCTGGCTCTTCAAAAATTATCAGG 60.163 44.000 0.00 0.00 38.13 3.86
6760 7553 5.329035 TGGCTCTTCAAAAATTATCAGGC 57.671 39.130 0.00 0.00 0.00 4.85
6761 7554 4.160252 TGGCTCTTCAAAAATTATCAGGCC 59.840 41.667 0.00 0.00 35.77 5.19
6762 7555 4.160252 GGCTCTTCAAAAATTATCAGGCCA 59.840 41.667 5.01 0.00 35.37 5.36
6763 7556 5.163374 GGCTCTTCAAAAATTATCAGGCCAT 60.163 40.000 5.01 0.00 35.37 4.40
6764 7557 5.981915 GCTCTTCAAAAATTATCAGGCCATC 59.018 40.000 5.01 0.00 0.00 3.51
6765 7558 6.183360 GCTCTTCAAAAATTATCAGGCCATCT 60.183 38.462 5.01 0.00 0.00 2.90
6766 7559 7.104043 TCTTCAAAAATTATCAGGCCATCTG 57.896 36.000 5.01 0.00 44.68 2.90
6777 7570 2.105124 GCCATCTGAGCCTTCAAGC 58.895 57.895 0.00 0.00 31.69 4.01
6778 7571 0.679002 GCCATCTGAGCCTTCAAGCA 60.679 55.000 0.00 0.00 31.69 3.91
6779 7572 2.022754 GCCATCTGAGCCTTCAAGCAT 61.023 52.381 0.00 0.00 31.69 3.79
6780 7573 2.376109 CCATCTGAGCCTTCAAGCATT 58.624 47.619 0.00 0.00 31.69 3.56
6781 7574 2.358267 CCATCTGAGCCTTCAAGCATTC 59.642 50.000 0.00 0.00 31.69 2.67
6782 7575 1.730501 TCTGAGCCTTCAAGCATTCG 58.269 50.000 0.00 0.00 31.69 3.34
6783 7576 1.276138 TCTGAGCCTTCAAGCATTCGA 59.724 47.619 0.00 0.00 31.69 3.71
6784 7577 2.079158 CTGAGCCTTCAAGCATTCGAA 58.921 47.619 0.00 0.00 31.69 3.71
6785 7578 2.079158 TGAGCCTTCAAGCATTCGAAG 58.921 47.619 3.35 0.00 38.68 3.79
6786 7579 0.807496 AGCCTTCAAGCATTCGAAGC 59.193 50.000 3.35 7.70 37.83 3.86
6787 7580 0.523072 GCCTTCAAGCATTCGAAGCA 59.477 50.000 17.76 0.07 37.83 3.91
6788 7581 1.133790 GCCTTCAAGCATTCGAAGCAT 59.866 47.619 17.76 6.86 37.83 3.79
6789 7582 2.416431 GCCTTCAAGCATTCGAAGCATT 60.416 45.455 17.76 4.51 37.83 3.56
6790 7583 3.176708 CCTTCAAGCATTCGAAGCATTG 58.823 45.455 17.76 14.39 37.83 2.82
6791 7584 2.925578 TCAAGCATTCGAAGCATTGG 57.074 45.000 17.76 7.48 0.00 3.16
6792 7585 1.473677 TCAAGCATTCGAAGCATTGGG 59.526 47.619 17.76 6.21 0.00 4.12
6793 7586 0.174162 AAGCATTCGAAGCATTGGGC 59.826 50.000 17.76 7.32 45.30 5.36
6794 7587 1.227060 GCATTCGAAGCATTGGGCC 60.227 57.895 3.35 0.00 46.50 5.80
6795 7588 1.064621 CATTCGAAGCATTGGGCCG 59.935 57.895 3.35 0.00 46.50 6.13
6796 7589 2.774799 ATTCGAAGCATTGGGCCGC 61.775 57.895 3.35 0.00 46.50 6.53
6799 7592 3.070576 GAAGCATTGGGCCGCCTT 61.071 61.111 9.86 0.00 46.50 4.35
6800 7593 3.068729 GAAGCATTGGGCCGCCTTC 62.069 63.158 9.86 4.36 46.50 3.46
6827 7620 3.851128 GCTACCCCAGGAGCCGAC 61.851 72.222 0.00 0.00 32.25 4.79
6828 7621 2.042843 CTACCCCAGGAGCCGACT 60.043 66.667 0.00 0.00 0.00 4.18
6829 7622 2.043248 TACCCCAGGAGCCGACTC 60.043 66.667 0.00 0.00 42.66 3.36
6830 7623 2.575455 CTACCCCAGGAGCCGACTCT 62.575 65.000 0.00 0.00 42.98 3.24
6831 7624 2.569218 TACCCCAGGAGCCGACTCTC 62.569 65.000 0.00 0.00 42.98 3.20
6832 7625 2.363018 CCCAGGAGCCGACTCTCA 60.363 66.667 0.00 0.00 42.98 3.27
6833 7626 2.422231 CCCAGGAGCCGACTCTCAG 61.422 68.421 0.00 0.00 42.98 3.35
6834 7627 1.379176 CCAGGAGCCGACTCTCAGA 60.379 63.158 0.00 0.00 42.98 3.27
6835 7628 0.967887 CCAGGAGCCGACTCTCAGAA 60.968 60.000 0.00 0.00 42.98 3.02
6836 7629 0.455410 CAGGAGCCGACTCTCAGAAG 59.545 60.000 0.00 0.00 42.98 2.85
6837 7630 0.682855 AGGAGCCGACTCTCAGAAGG 60.683 60.000 0.00 0.00 42.98 3.46
6843 7636 1.513622 GACTCTCAGAAGGCGACCC 59.486 63.158 0.00 0.00 0.00 4.46
6844 7637 1.228894 ACTCTCAGAAGGCGACCCA 60.229 57.895 0.00 0.00 0.00 4.51
6845 7638 1.254284 ACTCTCAGAAGGCGACCCAG 61.254 60.000 0.00 0.00 0.00 4.45
6846 7639 2.125350 CTCAGAAGGCGACCCAGC 60.125 66.667 0.00 0.00 0.00 4.85
6854 7647 2.347490 GCGACCCAGCCTCAGAAA 59.653 61.111 0.00 0.00 0.00 2.52
6855 7648 2.035442 GCGACCCAGCCTCAGAAAC 61.035 63.158 0.00 0.00 0.00 2.78
6856 7649 1.376037 CGACCCAGCCTCAGAAACC 60.376 63.158 0.00 0.00 0.00 3.27
6857 7650 1.831652 CGACCCAGCCTCAGAAACCT 61.832 60.000 0.00 0.00 0.00 3.50
6858 7651 0.035915 GACCCAGCCTCAGAAACCTC 60.036 60.000 0.00 0.00 0.00 3.85
6859 7652 1.301293 CCCAGCCTCAGAAACCTCC 59.699 63.158 0.00 0.00 0.00 4.30
6860 7653 1.204113 CCCAGCCTCAGAAACCTCCT 61.204 60.000 0.00 0.00 0.00 3.69
6861 7654 0.251634 CCAGCCTCAGAAACCTCCTC 59.748 60.000 0.00 0.00 0.00 3.71
6862 7655 0.251634 CAGCCTCAGAAACCTCCTCC 59.748 60.000 0.00 0.00 0.00 4.30
6863 7656 0.912006 AGCCTCAGAAACCTCCTCCC 60.912 60.000 0.00 0.00 0.00 4.30
6864 7657 1.916206 GCCTCAGAAACCTCCTCCCC 61.916 65.000 0.00 0.00 0.00 4.81
6865 7658 1.275421 CCTCAGAAACCTCCTCCCCC 61.275 65.000 0.00 0.00 0.00 5.40
6866 7659 0.547712 CTCAGAAACCTCCTCCCCCA 60.548 60.000 0.00 0.00 0.00 4.96
6867 7660 0.104144 TCAGAAACCTCCTCCCCCAA 60.104 55.000 0.00 0.00 0.00 4.12
6868 7661 0.329596 CAGAAACCTCCTCCCCCAAG 59.670 60.000 0.00 0.00 0.00 3.61
6869 7662 0.196118 AGAAACCTCCTCCCCCAAGA 59.804 55.000 0.00 0.00 0.00 3.02
6870 7663 1.203622 AGAAACCTCCTCCCCCAAGAT 60.204 52.381 0.00 0.00 0.00 2.40
6871 7664 2.047296 AGAAACCTCCTCCCCCAAGATA 59.953 50.000 0.00 0.00 0.00 1.98
6872 7665 2.680439 AACCTCCTCCCCCAAGATAA 57.320 50.000 0.00 0.00 0.00 1.75
6873 7666 1.894699 ACCTCCTCCCCCAAGATAAC 58.105 55.000 0.00 0.00 0.00 1.89
6874 7667 1.369983 ACCTCCTCCCCCAAGATAACT 59.630 52.381 0.00 0.00 0.00 2.24
6875 7668 2.595380 ACCTCCTCCCCCAAGATAACTA 59.405 50.000 0.00 0.00 0.00 2.24
6876 7669 2.973406 CCTCCTCCCCCAAGATAACTAC 59.027 54.545 0.00 0.00 0.00 2.73
6877 7670 3.632645 CCTCCTCCCCCAAGATAACTACA 60.633 52.174 0.00 0.00 0.00 2.74
6878 7671 4.037927 CTCCTCCCCCAAGATAACTACAA 58.962 47.826 0.00 0.00 0.00 2.41
6879 7672 4.037927 TCCTCCCCCAAGATAACTACAAG 58.962 47.826 0.00 0.00 0.00 3.16
6880 7673 4.037927 CCTCCCCCAAGATAACTACAAGA 58.962 47.826 0.00 0.00 0.00 3.02
6881 7674 4.660771 CCTCCCCCAAGATAACTACAAGAT 59.339 45.833 0.00 0.00 0.00 2.40
6882 7675 5.455326 CCTCCCCCAAGATAACTACAAGATG 60.455 48.000 0.00 0.00 0.00 2.90
6883 7676 4.412199 TCCCCCAAGATAACTACAAGATGG 59.588 45.833 0.00 0.00 0.00 3.51
6884 7677 4.137543 CCCCAAGATAACTACAAGATGGC 58.862 47.826 0.00 0.00 0.00 4.40
6885 7678 4.137543 CCCAAGATAACTACAAGATGGCC 58.862 47.826 0.00 0.00 0.00 5.36
6886 7679 3.809832 CCAAGATAACTACAAGATGGCCG 59.190 47.826 0.00 0.00 0.00 6.13
6887 7680 4.442893 CCAAGATAACTACAAGATGGCCGA 60.443 45.833 0.00 0.00 0.00 5.54
6888 7681 4.323553 AGATAACTACAAGATGGCCGAC 57.676 45.455 0.00 0.00 0.00 4.79
6889 7682 3.961408 AGATAACTACAAGATGGCCGACT 59.039 43.478 0.00 0.00 0.00 4.18
6890 7683 2.674796 AACTACAAGATGGCCGACTC 57.325 50.000 0.00 0.00 0.00 3.36
6891 7684 0.824759 ACTACAAGATGGCCGACTCC 59.175 55.000 0.00 0.00 0.00 3.85
6892 7685 0.824109 CTACAAGATGGCCGACTCCA 59.176 55.000 0.00 0.00 40.97 3.86
6893 7686 0.824109 TACAAGATGGCCGACTCCAG 59.176 55.000 0.00 0.00 39.89 3.86
6894 7687 1.153289 CAAGATGGCCGACTCCAGG 60.153 63.158 0.00 0.00 39.89 4.45
6895 7688 1.306141 AAGATGGCCGACTCCAGGA 60.306 57.895 0.00 0.00 39.89 3.86
6896 7689 0.909610 AAGATGGCCGACTCCAGGAA 60.910 55.000 0.00 0.00 39.89 3.36
6897 7690 1.144936 GATGGCCGACTCCAGGAAG 59.855 63.158 0.00 0.00 39.89 3.46
6898 7691 2.932130 GATGGCCGACTCCAGGAAGC 62.932 65.000 0.00 0.00 39.89 3.86
6899 7692 4.475135 GGCCGACTCCAGGAAGCC 62.475 72.222 4.19 4.19 0.00 4.35
6900 7693 4.821589 GCCGACTCCAGGAAGCCG 62.822 72.222 0.00 0.00 0.00 5.52
6901 7694 4.148825 CCGACTCCAGGAAGCCGG 62.149 72.222 0.00 0.00 0.00 6.13
6902 7695 4.821589 CGACTCCAGGAAGCCGGC 62.822 72.222 21.89 21.89 0.00 6.13
6903 7696 4.475135 GACTCCAGGAAGCCGGCC 62.475 72.222 26.15 8.83 0.00 6.13
6905 7698 3.801997 CTCCAGGAAGCCGGCCAT 61.802 66.667 26.15 13.52 0.00 4.40
6906 7699 4.113815 TCCAGGAAGCCGGCCATG 62.114 66.667 26.15 16.87 0.00 3.66
6908 7701 4.113815 CAGGAAGCCGGCCATGGA 62.114 66.667 26.15 0.00 0.00 3.41
6909 7702 3.801997 AGGAAGCCGGCCATGGAG 61.802 66.667 26.15 8.43 0.00 3.86
6910 7703 3.797353 GGAAGCCGGCCATGGAGA 61.797 66.667 26.15 0.00 0.00 3.71
6911 7704 2.272146 GAAGCCGGCCATGGAGAA 59.728 61.111 26.15 0.00 0.00 2.87
6912 7705 2.044946 AAGCCGGCCATGGAGAAC 60.045 61.111 26.15 0.99 0.00 3.01
6913 7706 3.976701 AAGCCGGCCATGGAGAACG 62.977 63.158 26.15 13.41 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.841813 TCATGAGTGACCCTACCTTTTGTA 59.158 41.667 0.00 0.00 0.00 2.41
205 206 0.390340 GCGGAGACAATGCTCACTCA 60.390 55.000 6.92 0.00 36.62 3.41
353 368 4.846779 ATAAATGGATAATTTGGCGCGT 57.153 36.364 8.43 0.00 38.93 6.01
421 438 4.835284 TCATGACTAAACCTATGTGCCA 57.165 40.909 0.00 0.00 0.00 4.92
431 448 6.430451 CAACTCAACCTGTTCATGACTAAAC 58.570 40.000 0.00 0.00 0.00 2.01
450 467 4.389576 CTTGCGGCGTGCCAACTC 62.390 66.667 12.06 0.00 45.60 3.01
463 480 0.310543 TTGTTCATGTCCGTGCTTGC 59.689 50.000 0.00 0.00 0.00 4.01
473 490 4.177026 GTCTCTAGATGCGTTGTTCATGT 58.823 43.478 0.00 0.00 0.00 3.21
493 513 3.998672 TCCAACGCCTCCACGGTC 61.999 66.667 0.00 0.00 37.37 4.79
613 633 1.669999 TAACCTAACCCTCGCCGCTC 61.670 60.000 0.00 0.00 0.00 5.03
679 704 0.473117 TGGGGTTCCTCGAGGACTTT 60.473 55.000 33.75 0.00 45.39 2.66
853 887 0.710588 GGGGAGTGAGGGGGAAAAAT 59.289 55.000 0.00 0.00 0.00 1.82
913 947 2.363018 GCTTTGGGAGGAAGGCCC 60.363 66.667 0.00 0.00 46.22 5.80
915 949 2.363018 GGGCTTTGGGAGGAAGGC 60.363 66.667 2.22 2.22 45.77 4.35
1005 1348 1.407851 CGGAGGGGTTTAGGGTTTAGC 60.408 57.143 0.00 0.00 0.00 3.09
1174 1519 4.741239 GCTGGGAGGGGGTGAGGA 62.741 72.222 0.00 0.00 0.00 3.71
1178 1523 3.406200 CTCTGCTGGGAGGGGGTG 61.406 72.222 0.00 0.00 0.00 4.61
1179 1524 3.615811 TCTCTGCTGGGAGGGGGT 61.616 66.667 0.00 0.00 34.39 4.95
1181 1526 2.063378 GTCTCTCTGCTGGGAGGGG 61.063 68.421 19.29 0.00 34.76 4.79
1185 1530 3.071206 GCGGTCTCTCTGCTGGGA 61.071 66.667 0.00 0.00 44.39 4.37
1187 1532 4.154347 GGGCGGTCTCTCTGCTGG 62.154 72.222 0.00 0.00 46.74 4.85
1188 1533 4.504916 CGGGCGGTCTCTCTGCTG 62.505 72.222 0.00 0.00 46.74 4.41
1201 1546 2.435938 TGTTTGGATCTCGCGGGC 60.436 61.111 6.13 0.00 0.00 6.13
1205 1550 1.710339 GCGACTGTTTGGATCTCGC 59.290 57.895 7.38 7.38 42.51 5.03
1207 1552 1.646189 GAGGCGACTGTTTGGATCTC 58.354 55.000 0.00 0.00 44.43 2.75
1216 1561 3.966930 GAGGGAGGGAGGCGACTGT 62.967 68.421 0.00 0.00 44.43 3.55
1217 1562 3.151022 GAGGGAGGGAGGCGACTG 61.151 72.222 0.00 0.00 44.43 3.51
1222 1567 4.890306 GGAGGGAGGGAGGGAGGC 62.890 77.778 0.00 0.00 0.00 4.70
1223 1568 4.548513 CGGAGGGAGGGAGGGAGG 62.549 77.778 0.00 0.00 0.00 4.30
1224 1569 3.742248 GACGGAGGGAGGGAGGGAG 62.742 73.684 0.00 0.00 0.00 4.30
1225 1570 3.752167 GACGGAGGGAGGGAGGGA 61.752 72.222 0.00 0.00 0.00 4.20
1320 1673 4.144727 GGAGCGGAGAGGGAGGGA 62.145 72.222 0.00 0.00 0.00 4.20
1350 1708 3.503839 AAACAGGAACCCCCGGCA 61.504 61.111 0.00 0.00 40.87 5.69
1353 1711 1.152631 AACCAAACAGGAACCCCCG 60.153 57.895 0.00 0.00 41.22 5.73
1361 1719 0.029300 CTCGCACACAACCAAACAGG 59.971 55.000 0.00 0.00 45.67 4.00
1380 1738 1.846648 CGTGTCAGCGAACTGTGAC 59.153 57.895 0.00 0.00 44.77 3.67
1435 1793 4.007644 CTGCTCACCTGTCGGGCA 62.008 66.667 0.00 0.00 39.10 5.36
1472 1830 2.124320 CATTCCCGGCCGGTGATT 60.124 61.111 40.52 27.87 0.00 2.57
1476 1834 3.931190 GAAACCATTCCCGGCCGGT 62.931 63.158 40.52 22.26 0.00 5.28
1535 1893 4.441792 GACAGAAACAAAAACCCTTGCAT 58.558 39.130 0.00 0.00 0.00 3.96
1538 1896 4.736126 AGGACAGAAACAAAAACCCTTG 57.264 40.909 0.00 0.00 0.00 3.61
1566 1924 2.186160 CAGCACCCAAGCACGTCAA 61.186 57.895 0.00 0.00 36.85 3.18
1568 1926 4.030452 GCAGCACCCAAGCACGTC 62.030 66.667 0.00 0.00 36.85 4.34
1724 2096 0.389426 AACGCACGGATGTAGGTCAC 60.389 55.000 0.00 0.00 0.00 3.67
1784 2156 5.586243 GCAGCCACAATCTTACAATCTCTAA 59.414 40.000 0.00 0.00 0.00 2.10
1843 2215 5.938125 GCATTTGTCTACTAGTGGAAAAGGA 59.062 40.000 20.98 8.53 0.00 3.36
1844 2216 5.940470 AGCATTTGTCTACTAGTGGAAAAGG 59.060 40.000 10.90 14.58 0.00 3.11
1845 2217 8.035394 TCTAGCATTTGTCTACTAGTGGAAAAG 58.965 37.037 10.90 2.56 34.89 2.27
1885 2257 9.676861 ATGATGCACATATACTGCTAACATATT 57.323 29.630 0.00 0.00 37.46 1.28
2048 2421 2.693797 AATTTCTGCAGTTCTGCACG 57.306 45.000 21.30 16.90 40.23 5.34
2345 2727 7.146648 ACACCGACAAAAACTGTTAAAAAGAA 58.853 30.769 0.00 0.00 38.84 2.52
2543 2932 7.404671 ACTCATGTTATCCAATTTACCCAAC 57.595 36.000 0.00 0.00 0.00 3.77
2745 3143 5.008217 GCACATGTTGTACCTGAAAGTGTAA 59.992 40.000 0.00 0.00 0.00 2.41
2902 3300 3.510388 TCCTCAGACGTGTTGATCATC 57.490 47.619 0.00 0.00 0.00 2.92
2958 3356 4.634012 AGTAACAAACACAGGATGCCTA 57.366 40.909 0.00 0.00 42.53 3.93
2996 3394 9.699410 CCTTTGGAATAGGGCAATCAATATATA 57.301 33.333 0.00 0.00 0.00 0.86
3235 3637 9.747898 AGTGTTACCATCCTATTAAATGTTCAA 57.252 29.630 0.00 0.00 0.00 2.69
3236 3638 9.391006 GAGTGTTACCATCCTATTAAATGTTCA 57.609 33.333 0.00 0.00 0.00 3.18
3237 3639 9.614792 AGAGTGTTACCATCCTATTAAATGTTC 57.385 33.333 0.00 0.00 0.00 3.18
3315 3717 9.589461 TTTTGGTTGGTAATAAAGTATGGAGAA 57.411 29.630 0.00 0.00 0.00 2.87
3571 3978 9.592196 AATATGGGTCATTAGTTTGCAATAGAT 57.408 29.630 0.00 0.00 0.00 1.98
3768 4175 1.985473 AGCACAGACCTGCATTTCAA 58.015 45.000 0.00 0.00 39.86 2.69
3787 4194 4.335416 CTCCAAAACCAGGAGCTTTGATA 58.665 43.478 12.35 3.40 45.51 2.15
3927 4334 2.986479 GCAAAATTCAACATGGACGTCC 59.014 45.455 28.17 28.17 0.00 4.79
3928 4335 3.425193 GTGCAAAATTCAACATGGACGTC 59.575 43.478 7.13 7.13 0.00 4.34
3929 4336 3.380142 GTGCAAAATTCAACATGGACGT 58.620 40.909 0.00 0.00 0.00 4.34
3930 4337 2.730928 GGTGCAAAATTCAACATGGACG 59.269 45.455 0.00 0.00 35.29 4.79
3931 4338 3.066380 GGGTGCAAAATTCAACATGGAC 58.934 45.455 0.00 0.00 33.92 4.02
3933 4340 3.007182 AGAGGGTGCAAAATTCAACATGG 59.993 43.478 0.00 0.00 0.00 3.66
3934 4341 4.261578 AGAGGGTGCAAAATTCAACATG 57.738 40.909 0.00 0.00 0.00 3.21
3935 4342 4.503643 CCAAGAGGGTGCAAAATTCAACAT 60.504 41.667 0.00 0.00 0.00 2.71
4046 4453 4.939509 ACGTATACAATCCAACACAAGC 57.060 40.909 3.32 0.00 0.00 4.01
4061 4468 9.553064 TGGTTAAGGTTCTAAACAAAACGTATA 57.447 29.630 0.00 0.00 0.00 1.47
4062 4469 8.344831 GTGGTTAAGGTTCTAAACAAAACGTAT 58.655 33.333 0.00 0.00 30.42 3.06
4132 4539 7.875554 GGGAAGGCAAATTTAAACTTCACAATA 59.124 33.333 20.74 0.00 40.39 1.90
4228 4784 4.751600 TCTCATGTAACTTGAACAGCACTG 59.248 41.667 0.00 0.00 0.00 3.66
4332 4888 3.614616 CCACGTAGATTCAGCAGAGTTTC 59.385 47.826 0.00 0.00 0.00 2.78
4340 4896 0.305922 GCATGCCACGTAGATTCAGC 59.694 55.000 6.36 0.00 0.00 4.26
4346 4902 4.006989 AGTTTAAATGCATGCCACGTAGA 58.993 39.130 16.68 0.00 0.00 2.59
4350 4906 3.214697 TCAGTTTAAATGCATGCCACG 57.785 42.857 16.68 0.30 0.00 4.94
4372 4928 3.976793 TTATGCAGCTAGCTCAAATGC 57.023 42.857 16.15 16.44 45.94 3.56
4394 4950 5.815740 ACACACGTCTGAGAACAAATTTACT 59.184 36.000 0.00 0.00 0.00 2.24
4404 4960 4.380841 AACACTAACACACGTCTGAGAA 57.619 40.909 0.00 0.00 0.00 2.87
4405 4961 4.380841 AAACACTAACACACGTCTGAGA 57.619 40.909 0.00 0.00 0.00 3.27
4637 5195 3.969287 AGATCTCAGCTGTACAAAGCA 57.031 42.857 14.67 0.00 46.08 3.91
4709 5267 0.316204 CCACCAGAAAGCTTTGCCAG 59.684 55.000 18.30 5.04 0.00 4.85
4784 5460 6.992123 TGACAAGTAATCAATAGCACCATAGG 59.008 38.462 0.00 0.00 0.00 2.57
5256 5933 3.091633 AGACATGGAACCAATTGGAGG 57.908 47.619 31.22 12.55 38.94 4.30
5294 5972 5.884792 AGAATTGTCCAGTCATCAGGATTTC 59.115 40.000 0.00 0.00 36.11 2.17
5334 6012 2.020720 CCCGCATTGGTAGCAATTGTA 58.979 47.619 17.28 0.00 35.15 2.41
5437 6115 6.651755 AAAAGCAACAACAGATGAACTTTG 57.348 33.333 0.00 0.00 32.97 2.77
5458 6136 2.301583 GCCAAGTCCTAATGCCCAAAAA 59.698 45.455 0.00 0.00 0.00 1.94
5491 6169 9.513906 TCAGTTTACATATCCAACATCAGAAAA 57.486 29.630 0.00 0.00 0.00 2.29
5724 6454 6.666980 TGCTCTATATCATCACTGCTATCCTT 59.333 38.462 0.00 0.00 0.00 3.36
5743 6473 3.264193 TGGCTCAAAAGAAGGATGCTCTA 59.736 43.478 0.00 0.00 0.00 2.43
5746 6476 2.592102 TGGCTCAAAAGAAGGATGCT 57.408 45.000 0.00 0.00 0.00 3.79
5747 6477 2.756760 TCATGGCTCAAAAGAAGGATGC 59.243 45.455 0.00 0.00 0.00 3.91
5748 6478 5.395682 TTTCATGGCTCAAAAGAAGGATG 57.604 39.130 0.00 0.00 0.00 3.51
5749 6479 6.616237 ATTTTCATGGCTCAAAAGAAGGAT 57.384 33.333 0.00 0.00 0.00 3.24
5750 6480 6.721208 ACTATTTTCATGGCTCAAAAGAAGGA 59.279 34.615 0.00 0.00 0.00 3.36
5751 6481 6.928520 ACTATTTTCATGGCTCAAAAGAAGG 58.071 36.000 0.00 0.00 0.00 3.46
5752 6482 8.822652 AAACTATTTTCATGGCTCAAAAGAAG 57.177 30.769 0.00 0.00 0.00 2.85
5753 6483 9.612066 AAAAACTATTTTCATGGCTCAAAAGAA 57.388 25.926 0.00 0.00 33.48 2.52
5777 6507 6.693113 GCGGCAATGGAAAACAAAAATAAAAA 59.307 30.769 0.00 0.00 0.00 1.94
5778 6508 6.183360 TGCGGCAATGGAAAACAAAAATAAAA 60.183 30.769 0.00 0.00 0.00 1.52
5794 6524 2.174107 CGACACACTGCGGCAATG 59.826 61.111 10.22 10.22 0.00 2.82
5999 6729 7.068226 ACAGCCTTATTCACCCACATTAAATAC 59.932 37.037 0.00 0.00 0.00 1.89
6006 6736 2.308570 TGACAGCCTTATTCACCCACAT 59.691 45.455 0.00 0.00 0.00 3.21
6119 6850 1.123077 TGATTGAGACGAGATGGGGG 58.877 55.000 0.00 0.00 0.00 5.40
6169 6900 4.524802 TTCCATCTAACGTACTCCCCTA 57.475 45.455 0.00 0.00 0.00 3.53
6170 6901 3.393426 TTCCATCTAACGTACTCCCCT 57.607 47.619 0.00 0.00 0.00 4.79
6200 6931 3.431411 TGGGGACAGGGTAATACATCT 57.569 47.619 0.00 0.00 35.01 2.90
6224 6955 1.161563 TCGTCAAAAGCGGTCCCAAC 61.162 55.000 0.00 0.00 0.00 3.77
6243 6974 9.872684 AAATATGGTCATAAGATTCCATTGACT 57.127 29.630 0.00 0.00 40.54 3.41
6330 7061 5.163933 GACGTTTTGTCTATTATGGCGACAA 60.164 40.000 0.00 0.00 44.37 3.18
6331 7062 4.327898 GACGTTTTGTCTATTATGGCGACA 59.672 41.667 0.00 0.00 44.95 4.35
6332 7063 4.818825 GACGTTTTGTCTATTATGGCGAC 58.181 43.478 0.00 0.00 44.58 5.19
6356 7087 1.405105 TGTGCTGTCAAGGTTCAAAGC 59.595 47.619 0.00 0.00 0.00 3.51
6357 7088 3.781079 TTGTGCTGTCAAGGTTCAAAG 57.219 42.857 0.00 0.00 0.00 2.77
6358 7089 3.119173 CCTTTGTGCTGTCAAGGTTCAAA 60.119 43.478 0.00 0.00 0.00 2.69
6359 7090 2.426738 CCTTTGTGCTGTCAAGGTTCAA 59.573 45.455 0.00 0.00 0.00 2.69
6360 7091 2.023673 CCTTTGTGCTGTCAAGGTTCA 58.976 47.619 0.00 0.00 0.00 3.18
6363 7094 1.680338 GTCCTTTGTGCTGTCAAGGT 58.320 50.000 0.00 0.00 0.00 3.50
6364 7095 0.588252 CGTCCTTTGTGCTGTCAAGG 59.412 55.000 0.00 0.00 0.00 3.61
6365 7096 1.581934 TCGTCCTTTGTGCTGTCAAG 58.418 50.000 0.00 0.00 0.00 3.02
6366 7097 2.254546 ATCGTCCTTTGTGCTGTCAA 57.745 45.000 0.00 0.00 0.00 3.18
6367 7098 2.254546 AATCGTCCTTTGTGCTGTCA 57.745 45.000 0.00 0.00 0.00 3.58
6368 7099 2.350772 CCAAATCGTCCTTTGTGCTGTC 60.351 50.000 6.96 0.00 34.90 3.51
6369 7100 1.608590 CCAAATCGTCCTTTGTGCTGT 59.391 47.619 6.96 0.00 34.90 4.40
6370 7101 1.068333 CCCAAATCGTCCTTTGTGCTG 60.068 52.381 6.96 0.00 34.90 4.41
6371 7102 1.247567 CCCAAATCGTCCTTTGTGCT 58.752 50.000 6.96 0.00 34.90 4.40
6372 7103 0.243636 CCCCAAATCGTCCTTTGTGC 59.756 55.000 6.96 0.00 34.90 4.57
6373 7104 1.904287 TCCCCAAATCGTCCTTTGTG 58.096 50.000 6.96 0.00 34.90 3.33
6374 7105 2.899303 ATCCCCAAATCGTCCTTTGT 57.101 45.000 6.96 0.00 34.90 2.83
6375 7106 3.088532 TGAATCCCCAAATCGTCCTTTG 58.911 45.455 0.00 0.00 36.17 2.77
6376 7107 3.449746 TGAATCCCCAAATCGTCCTTT 57.550 42.857 0.00 0.00 0.00 3.11
6377 7108 3.669939 ATGAATCCCCAAATCGTCCTT 57.330 42.857 0.00 0.00 0.00 3.36
6378 7109 3.290710 CAATGAATCCCCAAATCGTCCT 58.709 45.455 0.00 0.00 0.00 3.85
6379 7110 2.362077 CCAATGAATCCCCAAATCGTCC 59.638 50.000 0.00 0.00 0.00 4.79
6380 7111 2.362077 CCCAATGAATCCCCAAATCGTC 59.638 50.000 0.00 0.00 0.00 4.20
6381 7112 2.292192 ACCCAATGAATCCCCAAATCGT 60.292 45.455 0.00 0.00 0.00 3.73
6382 7113 2.101249 CACCCAATGAATCCCCAAATCG 59.899 50.000 0.00 0.00 0.00 3.34
6409 7140 3.396276 TGGAGTGTTGAACCCCTCAAATA 59.604 43.478 12.27 0.00 45.67 1.40
6426 7157 5.779771 ACCACAATTAAAATCATGGTGGAGT 59.220 36.000 15.93 0.00 45.42 3.85
6427 7158 6.284891 ACCACAATTAAAATCATGGTGGAG 57.715 37.500 15.93 0.00 45.42 3.86
6428 7159 7.969690 ATACCACAATTAAAATCATGGTGGA 57.030 32.000 15.93 3.87 45.42 4.02
6430 7161 7.434897 CCGAATACCACAATTAAAATCATGGTG 59.565 37.037 15.89 0.00 37.23 4.17
6431 7162 7.123547 ACCGAATACCACAATTAAAATCATGGT 59.876 33.333 12.79 12.79 38.97 3.55
6432 7163 7.434897 CACCGAATACCACAATTAAAATCATGG 59.565 37.037 0.00 4.43 32.40 3.66
6433 7164 8.187480 TCACCGAATACCACAATTAAAATCATG 58.813 33.333 0.00 0.00 0.00 3.07
6434 7165 8.287439 TCACCGAATACCACAATTAAAATCAT 57.713 30.769 0.00 0.00 0.00 2.45
6435 7166 7.689446 TCACCGAATACCACAATTAAAATCA 57.311 32.000 0.00 0.00 0.00 2.57
6436 7167 8.973835 TTTCACCGAATACCACAATTAAAATC 57.026 30.769 0.00 0.00 0.00 2.17
6437 7168 9.581099 GATTTCACCGAATACCACAATTAAAAT 57.419 29.630 0.00 0.00 0.00 1.82
6438 7169 8.798402 AGATTTCACCGAATACCACAATTAAAA 58.202 29.630 0.00 0.00 0.00 1.52
6439 7170 8.343168 AGATTTCACCGAATACCACAATTAAA 57.657 30.769 0.00 0.00 0.00 1.52
6440 7171 7.931578 AGATTTCACCGAATACCACAATTAA 57.068 32.000 0.00 0.00 0.00 1.40
6441 7172 7.931578 AAGATTTCACCGAATACCACAATTA 57.068 32.000 0.00 0.00 0.00 1.40
6442 7173 6.834168 AAGATTTCACCGAATACCACAATT 57.166 33.333 0.00 0.00 0.00 2.32
6443 7174 6.127730 GGAAAGATTTCACCGAATACCACAAT 60.128 38.462 7.56 0.00 38.92 2.71
6444 7175 5.182380 GGAAAGATTTCACCGAATACCACAA 59.818 40.000 7.56 0.00 38.92 3.33
6445 7176 4.698304 GGAAAGATTTCACCGAATACCACA 59.302 41.667 7.56 0.00 38.92 4.17
6446 7177 4.941873 AGGAAAGATTTCACCGAATACCAC 59.058 41.667 7.56 0.00 38.92 4.16
6447 7178 5.045869 AGAGGAAAGATTTCACCGAATACCA 60.046 40.000 7.56 0.00 38.92 3.25
6448 7179 5.429130 AGAGGAAAGATTTCACCGAATACC 58.571 41.667 7.56 0.00 38.92 2.73
6449 7180 9.760077 TTATAGAGGAAAGATTTCACCGAATAC 57.240 33.333 7.56 0.00 38.92 1.89
6451 7182 9.495572 GATTATAGAGGAAAGATTTCACCGAAT 57.504 33.333 7.56 0.17 38.92 3.34
6452 7183 7.931948 GGATTATAGAGGAAAGATTTCACCGAA 59.068 37.037 7.56 0.00 38.92 4.30
6453 7184 7.442656 GGATTATAGAGGAAAGATTTCACCGA 58.557 38.462 7.56 0.00 38.92 4.69
6454 7185 6.651225 GGGATTATAGAGGAAAGATTTCACCG 59.349 42.308 7.56 0.00 38.92 4.94
6455 7186 6.943146 GGGGATTATAGAGGAAAGATTTCACC 59.057 42.308 7.56 0.00 38.92 4.02
6456 7187 6.943146 GGGGGATTATAGAGGAAAGATTTCAC 59.057 42.308 7.56 1.66 38.92 3.18
6457 7188 7.091533 GGGGGATTATAGAGGAAAGATTTCA 57.908 40.000 7.56 0.00 38.92 2.69
6480 7211 1.073284 CACCCACCCCTATAATTCGGG 59.927 57.143 0.00 0.00 43.05 5.14
6481 7212 1.073284 CCACCCACCCCTATAATTCGG 59.927 57.143 0.00 0.00 0.00 4.30
6482 7213 1.772453 ACCACCCACCCCTATAATTCG 59.228 52.381 0.00 0.00 0.00 3.34
6483 7214 3.965470 AACCACCCACCCCTATAATTC 57.035 47.619 0.00 0.00 0.00 2.17
6484 7215 6.045106 CAGTATAACCACCCACCCCTATAATT 59.955 42.308 0.00 0.00 0.00 1.40
6485 7216 5.550403 CAGTATAACCACCCACCCCTATAAT 59.450 44.000 0.00 0.00 0.00 1.28
6486 7217 4.909088 CAGTATAACCACCCACCCCTATAA 59.091 45.833 0.00 0.00 0.00 0.98
6487 7218 4.495565 CAGTATAACCACCCACCCCTATA 58.504 47.826 0.00 0.00 0.00 1.31
6488 7219 3.323775 CAGTATAACCACCCACCCCTAT 58.676 50.000 0.00 0.00 0.00 2.57
6489 7220 2.630180 CCAGTATAACCACCCACCCCTA 60.630 54.545 0.00 0.00 0.00 3.53
6490 7221 1.591768 CAGTATAACCACCCACCCCT 58.408 55.000 0.00 0.00 0.00 4.79
6491 7222 0.549469 CCAGTATAACCACCCACCCC 59.451 60.000 0.00 0.00 0.00 4.95
6492 7223 1.292085 ACCAGTATAACCACCCACCC 58.708 55.000 0.00 0.00 0.00 4.61
6493 7224 3.263937 TGTTACCAGTATAACCACCCACC 59.736 47.826 0.00 0.00 34.67 4.61
6494 7225 4.223477 TCTGTTACCAGTATAACCACCCAC 59.777 45.833 0.00 0.00 39.82 4.61
6495 7226 4.427637 TCTGTTACCAGTATAACCACCCA 58.572 43.478 0.00 0.00 39.82 4.51
6496 7227 4.713321 TCTCTGTTACCAGTATAACCACCC 59.287 45.833 0.00 0.00 39.82 4.61
6497 7228 5.927281 TCTCTGTTACCAGTATAACCACC 57.073 43.478 0.00 0.00 39.82 4.61
6498 7229 6.757010 CACATCTCTGTTACCAGTATAACCAC 59.243 42.308 0.00 0.00 39.82 4.16
6499 7230 6.629515 GCACATCTCTGTTACCAGTATAACCA 60.630 42.308 0.00 0.00 39.82 3.67
6500 7231 5.753921 GCACATCTCTGTTACCAGTATAACC 59.246 44.000 0.00 0.00 39.82 2.85
6501 7232 6.338146 TGCACATCTCTGTTACCAGTATAAC 58.662 40.000 0.00 0.00 39.82 1.89
6502 7233 6.538945 TGCACATCTCTGTTACCAGTATAA 57.461 37.500 0.00 0.00 39.82 0.98
6503 7234 6.731292 ATGCACATCTCTGTTACCAGTATA 57.269 37.500 0.00 0.00 39.82 1.47
6504 7235 5.620738 ATGCACATCTCTGTTACCAGTAT 57.379 39.130 0.00 0.00 39.82 2.12
6505 7236 5.420725 AATGCACATCTCTGTTACCAGTA 57.579 39.130 0.00 0.00 39.82 2.74
6506 7237 3.988976 ATGCACATCTCTGTTACCAGT 57.011 42.857 0.00 0.00 39.82 4.00
6507 7238 5.468072 GGATAATGCACATCTCTGTTACCAG 59.532 44.000 9.38 0.00 40.25 4.00
6508 7239 5.130975 AGGATAATGCACATCTCTGTTACCA 59.869 40.000 9.38 0.00 31.62 3.25
6509 7240 5.468072 CAGGATAATGCACATCTCTGTTACC 59.532 44.000 9.38 0.00 31.62 2.85
6510 7241 6.051717 ACAGGATAATGCACATCTCTGTTAC 58.948 40.000 18.48 2.51 33.71 2.50
6511 7242 6.239217 ACAGGATAATGCACATCTCTGTTA 57.761 37.500 18.48 2.84 33.71 2.41
6512 7243 5.108187 ACAGGATAATGCACATCTCTGTT 57.892 39.130 18.48 10.07 33.71 3.16
6513 7244 4.767578 ACAGGATAATGCACATCTCTGT 57.232 40.909 18.48 18.48 33.16 3.41
6514 7245 8.309656 TCTAATACAGGATAATGCACATCTCTG 58.690 37.037 17.69 17.69 31.98 3.35
6518 7249 7.880195 ACCTTCTAATACAGGATAATGCACATC 59.120 37.037 0.00 0.00 33.90 3.06
6566 7297 4.142038 GTTGTTGTTGGTCTTCCTGGTAT 58.858 43.478 0.00 0.00 34.23 2.73
6577 7308 3.676291 AGCTTTGTTGTTGTTGTTGGT 57.324 38.095 0.00 0.00 0.00 3.67
6584 7315 4.434713 AGAAACGAAGCTTTGTTGTTGT 57.565 36.364 28.65 15.58 35.06 3.32
6591 7322 9.612620 ACTATTTTATCAAGAAACGAAGCTTTG 57.387 29.630 12.41 12.41 0.00 2.77
6660 7453 4.240175 AGACGCGTCCTTATTTCTATCC 57.760 45.455 34.08 6.15 0.00 2.59
6672 7465 3.127352 CTGCTCCCTAGACGCGTCC 62.127 68.421 34.08 17.98 0.00 4.79
6673 7466 2.409651 CTGCTCCCTAGACGCGTC 59.590 66.667 31.30 31.30 0.00 5.19
6674 7467 3.827898 GCTGCTCCCTAGACGCGT 61.828 66.667 13.85 13.85 0.00 6.01
6675 7468 4.577246 GGCTGCTCCCTAGACGCG 62.577 72.222 3.53 3.53 0.00 6.01
6684 7477 4.767255 CGACACCAGGGCTGCTCC 62.767 72.222 0.00 0.00 0.00 4.70
6685 7478 4.767255 CCGACACCAGGGCTGCTC 62.767 72.222 0.00 0.00 0.00 4.26
6687 7480 4.767255 CTCCGACACCAGGGCTGC 62.767 72.222 0.00 0.00 0.00 5.25
6688 7481 1.541310 TTACTCCGACACCAGGGCTG 61.541 60.000 0.00 0.00 0.00 4.85
6689 7482 0.834687 TTTACTCCGACACCAGGGCT 60.835 55.000 0.00 0.00 0.00 5.19
6690 7483 0.252197 ATTTACTCCGACACCAGGGC 59.748 55.000 0.00 0.00 0.00 5.19
6691 7484 1.406887 CCATTTACTCCGACACCAGGG 60.407 57.143 0.00 0.00 0.00 4.45
6692 7485 2.012051 GCCATTTACTCCGACACCAGG 61.012 57.143 0.00 0.00 0.00 4.45
6693 7486 1.369625 GCCATTTACTCCGACACCAG 58.630 55.000 0.00 0.00 0.00 4.00
6694 7487 0.035820 GGCCATTTACTCCGACACCA 60.036 55.000 0.00 0.00 0.00 4.17
6695 7488 0.035820 TGGCCATTTACTCCGACACC 60.036 55.000 0.00 0.00 0.00 4.16
6696 7489 1.084289 GTGGCCATTTACTCCGACAC 58.916 55.000 9.72 0.00 0.00 3.67
6697 7490 0.390603 CGTGGCCATTTACTCCGACA 60.391 55.000 9.72 0.00 0.00 4.35
6698 7491 1.087771 CCGTGGCCATTTACTCCGAC 61.088 60.000 9.72 0.00 0.00 4.79
6699 7492 1.219664 CCGTGGCCATTTACTCCGA 59.780 57.895 9.72 0.00 0.00 4.55
6700 7493 1.817941 CCCGTGGCCATTTACTCCG 60.818 63.158 9.72 5.55 0.00 4.63
6701 7494 0.542805 TACCCGTGGCCATTTACTCC 59.457 55.000 9.72 0.00 0.00 3.85
6702 7495 1.949465 CTACCCGTGGCCATTTACTC 58.051 55.000 9.72 0.00 0.00 2.59
6703 7496 0.107361 GCTACCCGTGGCCATTTACT 60.107 55.000 9.72 0.00 0.00 2.24
6704 7497 2.400911 GCTACCCGTGGCCATTTAC 58.599 57.895 9.72 0.00 0.00 2.01
6705 7498 4.968370 GCTACCCGTGGCCATTTA 57.032 55.556 9.72 0.00 0.00 1.40
6711 7504 1.300697 CGATTAGGCTACCCGTGGC 60.301 63.158 0.00 0.00 35.76 5.01
6712 7505 0.031721 GTCGATTAGGCTACCCGTGG 59.968 60.000 12.52 0.00 35.76 4.94
6713 7506 1.030457 AGTCGATTAGGCTACCCGTG 58.970 55.000 12.52 0.00 35.76 4.94
6714 7507 2.645838 TAGTCGATTAGGCTACCCGT 57.354 50.000 12.52 0.77 35.65 5.28
6719 7512 2.490351 CCAGGGGTAGTCGATTAGGCTA 60.490 54.545 0.00 0.00 35.65 3.93
6720 7513 1.705873 CAGGGGTAGTCGATTAGGCT 58.294 55.000 0.00 0.00 38.92 4.58
6721 7514 0.680061 CCAGGGGTAGTCGATTAGGC 59.320 60.000 0.00 0.00 0.00 3.93
6722 7515 0.680061 GCCAGGGGTAGTCGATTAGG 59.320 60.000 0.00 0.00 0.00 2.69
6723 7516 1.614413 GAGCCAGGGGTAGTCGATTAG 59.386 57.143 0.00 0.00 0.00 1.73
6724 7517 1.217183 AGAGCCAGGGGTAGTCGATTA 59.783 52.381 0.00 0.00 0.00 1.75
6725 7518 0.032017 AGAGCCAGGGGTAGTCGATT 60.032 55.000 0.00 0.00 0.00 3.34
6726 7519 0.032017 AAGAGCCAGGGGTAGTCGAT 60.032 55.000 0.00 0.00 0.00 3.59
6727 7520 0.683504 GAAGAGCCAGGGGTAGTCGA 60.684 60.000 0.00 0.00 0.00 4.20
6728 7521 0.970937 TGAAGAGCCAGGGGTAGTCG 60.971 60.000 0.00 0.00 0.00 4.18
6729 7522 1.276622 TTGAAGAGCCAGGGGTAGTC 58.723 55.000 0.00 0.00 0.00 2.59
6730 7523 1.742308 TTTGAAGAGCCAGGGGTAGT 58.258 50.000 0.00 0.00 0.00 2.73
6731 7524 2.879103 TTTTGAAGAGCCAGGGGTAG 57.121 50.000 0.00 0.00 0.00 3.18
6732 7525 3.825908 ATTTTTGAAGAGCCAGGGGTA 57.174 42.857 0.00 0.00 0.00 3.69
6733 7526 2.702270 ATTTTTGAAGAGCCAGGGGT 57.298 45.000 0.00 0.00 0.00 4.95
6734 7527 4.711355 TGATAATTTTTGAAGAGCCAGGGG 59.289 41.667 0.00 0.00 0.00 4.79
6735 7528 5.163478 CCTGATAATTTTTGAAGAGCCAGGG 60.163 44.000 0.00 0.00 35.18 4.45
6736 7529 5.680665 GCCTGATAATTTTTGAAGAGCCAGG 60.681 44.000 0.00 0.00 40.11 4.45
6737 7530 5.346522 GCCTGATAATTTTTGAAGAGCCAG 58.653 41.667 0.00 0.00 0.00 4.85
6738 7531 4.160252 GGCCTGATAATTTTTGAAGAGCCA 59.840 41.667 0.00 0.00 35.58 4.75
6739 7532 4.160252 TGGCCTGATAATTTTTGAAGAGCC 59.840 41.667 3.32 0.00 36.06 4.70
6740 7533 5.329035 TGGCCTGATAATTTTTGAAGAGC 57.671 39.130 3.32 0.00 0.00 4.09
6741 7534 7.067859 TCAGATGGCCTGATAATTTTTGAAGAG 59.932 37.037 3.32 0.00 46.38 2.85
6742 7535 6.891361 TCAGATGGCCTGATAATTTTTGAAGA 59.109 34.615 3.32 0.00 46.38 2.87
6743 7536 7.104043 TCAGATGGCCTGATAATTTTTGAAG 57.896 36.000 3.32 0.00 46.38 3.02
6759 7552 0.679002 TGCTTGAAGGCTCAGATGGC 60.679 55.000 0.00 0.00 31.69 4.40
6760 7553 2.054232 ATGCTTGAAGGCTCAGATGG 57.946 50.000 0.00 0.00 31.69 3.51
6761 7554 2.031807 CGAATGCTTGAAGGCTCAGATG 59.968 50.000 0.00 0.00 31.69 2.90
6762 7555 2.093288 TCGAATGCTTGAAGGCTCAGAT 60.093 45.455 0.00 0.00 31.69 2.90
6763 7556 1.276138 TCGAATGCTTGAAGGCTCAGA 59.724 47.619 0.00 0.00 31.69 3.27
6764 7557 1.730501 TCGAATGCTTGAAGGCTCAG 58.269 50.000 0.00 0.00 31.69 3.35
6765 7558 2.079158 CTTCGAATGCTTGAAGGCTCA 58.921 47.619 0.00 0.00 38.31 4.26
6766 7559 1.202121 GCTTCGAATGCTTGAAGGCTC 60.202 52.381 0.00 0.00 41.46 4.70
6767 7560 0.807496 GCTTCGAATGCTTGAAGGCT 59.193 50.000 0.00 0.00 41.46 4.58
6768 7561 0.523072 TGCTTCGAATGCTTGAAGGC 59.477 50.000 16.76 7.10 41.46 4.35
6769 7562 3.176708 CAATGCTTCGAATGCTTGAAGG 58.823 45.455 16.76 0.00 41.46 3.46
6770 7563 3.176708 CCAATGCTTCGAATGCTTGAAG 58.823 45.455 16.76 0.00 43.48 3.02
6771 7564 2.094597 CCCAATGCTTCGAATGCTTGAA 60.095 45.455 16.76 2.00 0.00 2.69
6772 7565 1.473677 CCCAATGCTTCGAATGCTTGA 59.526 47.619 16.76 2.28 0.00 3.02
6773 7566 1.917273 CCCAATGCTTCGAATGCTTG 58.083 50.000 16.76 16.20 0.00 4.01
6774 7567 0.174162 GCCCAATGCTTCGAATGCTT 59.826 50.000 16.76 10.22 36.87 3.91
6775 7568 1.669999 GGCCCAATGCTTCGAATGCT 61.670 55.000 16.76 4.39 40.92 3.79
6776 7569 1.227060 GGCCCAATGCTTCGAATGC 60.227 57.895 0.00 5.47 40.92 3.56
6777 7570 1.064621 CGGCCCAATGCTTCGAATG 59.935 57.895 0.00 0.00 40.92 2.67
6778 7571 2.774799 GCGGCCCAATGCTTCGAAT 61.775 57.895 0.00 0.00 40.92 3.34
6779 7572 3.439540 GCGGCCCAATGCTTCGAA 61.440 61.111 0.00 0.00 40.92 3.71
6782 7575 3.068729 GAAGGCGGCCCAATGCTTC 62.069 63.158 17.02 8.06 40.92 3.86
6783 7576 3.070576 GAAGGCGGCCCAATGCTT 61.071 61.111 17.02 1.31 40.92 3.91
6810 7603 3.851128 GTCGGCTCCTGGGGTAGC 61.851 72.222 0.00 0.00 38.03 3.58
6811 7604 2.042843 AGTCGGCTCCTGGGGTAG 60.043 66.667 0.00 0.00 0.00 3.18
6812 7605 2.043248 GAGTCGGCTCCTGGGGTA 60.043 66.667 5.50 0.00 35.76 3.69
6813 7606 3.966930 GAGAGTCGGCTCCTGGGGT 62.967 68.421 14.69 0.00 42.59 4.95
6814 7607 3.151022 GAGAGTCGGCTCCTGGGG 61.151 72.222 14.69 0.00 42.59 4.96
6815 7608 2.363018 TGAGAGTCGGCTCCTGGG 60.363 66.667 14.69 0.00 42.59 4.45
6816 7609 0.967887 TTCTGAGAGTCGGCTCCTGG 60.968 60.000 14.69 3.85 42.59 4.45
6817 7610 0.455410 CTTCTGAGAGTCGGCTCCTG 59.545 60.000 14.69 9.47 42.59 3.86
6818 7611 0.682855 CCTTCTGAGAGTCGGCTCCT 60.683 60.000 14.69 0.38 42.59 3.69
6819 7612 1.813192 CCTTCTGAGAGTCGGCTCC 59.187 63.158 14.69 5.97 42.59 4.70
6820 7613 1.140804 GCCTTCTGAGAGTCGGCTC 59.859 63.158 9.58 9.58 41.94 4.70
6821 7614 2.705821 CGCCTTCTGAGAGTCGGCT 61.706 63.158 14.56 0.00 38.58 5.52
6822 7615 2.202676 CGCCTTCTGAGAGTCGGC 60.203 66.667 8.79 8.79 37.40 5.54
6823 7616 1.137825 GTCGCCTTCTGAGAGTCGG 59.862 63.158 1.56 0.00 0.00 4.79
6824 7617 1.137825 GGTCGCCTTCTGAGAGTCG 59.862 63.158 0.00 0.00 0.00 4.18
6825 7618 1.251527 TGGGTCGCCTTCTGAGAGTC 61.252 60.000 0.00 0.00 0.00 3.36
6826 7619 1.228894 TGGGTCGCCTTCTGAGAGT 60.229 57.895 0.00 0.00 0.00 3.24
6827 7620 1.515020 CTGGGTCGCCTTCTGAGAG 59.485 63.158 0.00 0.00 0.00 3.20
6828 7621 2.650116 GCTGGGTCGCCTTCTGAGA 61.650 63.158 0.00 0.00 0.00 3.27
6829 7622 2.125350 GCTGGGTCGCCTTCTGAG 60.125 66.667 0.00 0.00 0.00 3.35
6830 7623 3.706373 GGCTGGGTCGCCTTCTGA 61.706 66.667 0.00 0.00 46.63 3.27
6837 7630 2.035442 GTTTCTGAGGCTGGGTCGC 61.035 63.158 0.00 0.00 0.00 5.19
6838 7631 1.376037 GGTTTCTGAGGCTGGGTCG 60.376 63.158 0.00 0.00 0.00 4.79
6839 7632 0.035915 GAGGTTTCTGAGGCTGGGTC 60.036 60.000 0.00 0.00 0.00 4.46
6840 7633 1.492993 GGAGGTTTCTGAGGCTGGGT 61.493 60.000 0.00 0.00 0.00 4.51
6841 7634 1.204113 AGGAGGTTTCTGAGGCTGGG 61.204 60.000 0.00 0.00 0.00 4.45
6842 7635 0.251634 GAGGAGGTTTCTGAGGCTGG 59.748 60.000 0.00 0.00 0.00 4.85
6843 7636 0.251634 GGAGGAGGTTTCTGAGGCTG 59.748 60.000 0.00 0.00 0.00 4.85
6844 7637 0.912006 GGGAGGAGGTTTCTGAGGCT 60.912 60.000 0.00 0.00 0.00 4.58
6845 7638 1.604915 GGGAGGAGGTTTCTGAGGC 59.395 63.158 0.00 0.00 0.00 4.70
6846 7639 1.275421 GGGGGAGGAGGTTTCTGAGG 61.275 65.000 0.00 0.00 0.00 3.86
6847 7640 0.547712 TGGGGGAGGAGGTTTCTGAG 60.548 60.000 0.00 0.00 0.00 3.35
6848 7641 0.104144 TTGGGGGAGGAGGTTTCTGA 60.104 55.000 0.00 0.00 0.00 3.27
6849 7642 0.329596 CTTGGGGGAGGAGGTTTCTG 59.670 60.000 0.00 0.00 0.00 3.02
6850 7643 0.196118 TCTTGGGGGAGGAGGTTTCT 59.804 55.000 0.00 0.00 0.00 2.52
6851 7644 1.299939 ATCTTGGGGGAGGAGGTTTC 58.700 55.000 0.00 0.00 0.00 2.78
6852 7645 2.581246 GTTATCTTGGGGGAGGAGGTTT 59.419 50.000 0.00 0.00 0.00 3.27
6853 7646 2.206223 GTTATCTTGGGGGAGGAGGTT 58.794 52.381 0.00 0.00 0.00 3.50
6854 7647 1.369983 AGTTATCTTGGGGGAGGAGGT 59.630 52.381 0.00 0.00 0.00 3.85
6855 7648 2.198334 AGTTATCTTGGGGGAGGAGG 57.802 55.000 0.00 0.00 0.00 4.30
6856 7649 3.654273 TGTAGTTATCTTGGGGGAGGAG 58.346 50.000 0.00 0.00 0.00 3.69
6857 7650 3.788116 TGTAGTTATCTTGGGGGAGGA 57.212 47.619 0.00 0.00 0.00 3.71
6858 7651 4.037927 TCTTGTAGTTATCTTGGGGGAGG 58.962 47.826 0.00 0.00 0.00 4.30
6859 7652 5.455326 CCATCTTGTAGTTATCTTGGGGGAG 60.455 48.000 0.00 0.00 0.00 4.30
6860 7653 4.412199 CCATCTTGTAGTTATCTTGGGGGA 59.588 45.833 0.00 0.00 0.00 4.81
6861 7654 4.718961 CCATCTTGTAGTTATCTTGGGGG 58.281 47.826 0.00 0.00 0.00 5.40
6862 7655 4.137543 GCCATCTTGTAGTTATCTTGGGG 58.862 47.826 0.00 0.00 0.00 4.96
6863 7656 4.137543 GGCCATCTTGTAGTTATCTTGGG 58.862 47.826 0.00 0.00 0.00 4.12
6864 7657 3.809832 CGGCCATCTTGTAGTTATCTTGG 59.190 47.826 2.24 0.00 0.00 3.61
6865 7658 4.508124 GTCGGCCATCTTGTAGTTATCTTG 59.492 45.833 2.24 0.00 0.00 3.02
6866 7659 4.406003 AGTCGGCCATCTTGTAGTTATCTT 59.594 41.667 2.24 0.00 0.00 2.40
6867 7660 3.961408 AGTCGGCCATCTTGTAGTTATCT 59.039 43.478 2.24 0.00 0.00 1.98
6868 7661 4.299978 GAGTCGGCCATCTTGTAGTTATC 58.700 47.826 2.24 0.00 0.00 1.75
6869 7662 3.069729 GGAGTCGGCCATCTTGTAGTTAT 59.930 47.826 2.24 0.00 0.00 1.89
6870 7663 2.429610 GGAGTCGGCCATCTTGTAGTTA 59.570 50.000 2.24 0.00 0.00 2.24
6871 7664 1.207329 GGAGTCGGCCATCTTGTAGTT 59.793 52.381 2.24 0.00 0.00 2.24
6872 7665 0.824759 GGAGTCGGCCATCTTGTAGT 59.175 55.000 2.24 0.00 0.00 2.73
6873 7666 0.824109 TGGAGTCGGCCATCTTGTAG 59.176 55.000 2.24 0.00 31.66 2.74
6874 7667 0.824109 CTGGAGTCGGCCATCTTGTA 59.176 55.000 2.24 0.00 37.30 2.41
6875 7668 1.599047 CTGGAGTCGGCCATCTTGT 59.401 57.895 2.24 0.00 37.30 3.16
6876 7669 1.153289 CCTGGAGTCGGCCATCTTG 60.153 63.158 2.24 0.00 37.30 3.02
6877 7670 0.909610 TTCCTGGAGTCGGCCATCTT 60.910 55.000 2.24 0.00 37.30 2.40
6878 7671 1.306141 TTCCTGGAGTCGGCCATCT 60.306 57.895 2.24 0.00 37.30 2.90
6879 7672 1.144936 CTTCCTGGAGTCGGCCATC 59.855 63.158 2.24 0.00 37.30 3.51
6880 7673 3.036429 GCTTCCTGGAGTCGGCCAT 62.036 63.158 2.24 0.00 37.30 4.40
6881 7674 3.706373 GCTTCCTGGAGTCGGCCA 61.706 66.667 2.24 0.00 36.30 5.36
6882 7675 4.475135 GGCTTCCTGGAGTCGGCC 62.475 72.222 13.35 13.35 0.00 6.13
6883 7676 4.821589 CGGCTTCCTGGAGTCGGC 62.822 72.222 10.86 8.58 40.85 5.54
6885 7678 4.821589 GCCGGCTTCCTGGAGTCG 62.822 72.222 22.15 11.51 43.96 4.18
6886 7679 4.475135 GGCCGGCTTCCTGGAGTC 62.475 72.222 28.56 0.41 0.00 3.36
6888 7681 3.801997 ATGGCCGGCTTCCTGGAG 61.802 66.667 28.56 0.00 0.00 3.86
6889 7682 4.113815 CATGGCCGGCTTCCTGGA 62.114 66.667 28.56 0.00 0.00 3.86
6891 7684 4.113815 TCCATGGCCGGCTTCCTG 62.114 66.667 28.56 17.44 0.00 3.86
6892 7685 3.801997 CTCCATGGCCGGCTTCCT 61.802 66.667 28.56 5.52 0.00 3.36
6893 7686 3.344137 TTCTCCATGGCCGGCTTCC 62.344 63.158 28.56 10.74 0.00 3.46
6894 7687 2.115291 GTTCTCCATGGCCGGCTTC 61.115 63.158 28.56 11.61 0.00 3.86
6895 7688 2.044946 GTTCTCCATGGCCGGCTT 60.045 61.111 28.56 11.93 0.00 4.35
6896 7689 4.473520 CGTTCTCCATGGCCGGCT 62.474 66.667 28.56 3.74 0.00 5.52



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.