Multiple sequence alignment - TraesCS4D01G304400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G304400 | chr4D | 100.000 | 6708 | 0 | 0 | 1 | 6708 | 472932029 | 472925322 | 0.000000e+00 | 12388.0 |
1 | TraesCS4D01G304400 | chr4D | 82.865 | 1033 | 134 | 31 | 5269 | 6272 | 472880144 | 472879126 | 0.000000e+00 | 887.0 |
2 | TraesCS4D01G304400 | chr4D | 97.328 | 262 | 6 | 1 | 6446 | 6706 | 400894868 | 400894607 | 1.720000e-120 | 444.0 |
3 | TraesCS4D01G304400 | chr4D | 95.652 | 69 | 3 | 0 | 6377 | 6445 | 472481821 | 472481889 | 1.980000e-20 | 111.0 |
4 | TraesCS4D01G304400 | chr4B | 94.189 | 4147 | 150 | 37 | 2007 | 6127 | 595274843 | 595270762 | 0.000000e+00 | 6239.0 |
5 | TraesCS4D01G304400 | chr4B | 85.322 | 729 | 52 | 19 | 1328 | 2009 | 595275778 | 595275058 | 0.000000e+00 | 702.0 |
6 | TraesCS4D01G304400 | chr4B | 92.070 | 454 | 19 | 7 | 866 | 1308 | 595276298 | 595275851 | 2.050000e-174 | 623.0 |
7 | TraesCS4D01G304400 | chr4B | 91.640 | 311 | 16 | 2 | 4 | 314 | 595277139 | 595276839 | 8.040000e-114 | 422.0 |
8 | TraesCS4D01G304400 | chr4B | 92.308 | 273 | 12 | 5 | 6182 | 6445 | 595270763 | 595270491 | 4.910000e-101 | 379.0 |
9 | TraesCS4D01G304400 | chr4B | 79.747 | 158 | 25 | 6 | 6291 | 6445 | 594839338 | 594839491 | 2.560000e-19 | 108.0 |
10 | TraesCS4D01G304400 | chr4A | 89.313 | 3827 | 224 | 80 | 552 | 4291 | 679979582 | 679975854 | 0.000000e+00 | 4630.0 |
11 | TraesCS4D01G304400 | chr4A | 94.770 | 1415 | 59 | 7 | 4334 | 5743 | 679975741 | 679974337 | 0.000000e+00 | 2189.0 |
12 | TraesCS4D01G304400 | chr4A | 91.884 | 690 | 39 | 12 | 5768 | 6445 | 679974345 | 679973661 | 0.000000e+00 | 948.0 |
13 | TraesCS4D01G304400 | chr4A | 85.586 | 333 | 18 | 21 | 29 | 353 | 679980229 | 679979919 | 8.390000e-84 | 322.0 |
14 | TraesCS4D01G304400 | chr4A | 80.973 | 226 | 22 | 8 | 563 | 779 | 626306348 | 626306135 | 6.960000e-35 | 159.0 |
15 | TraesCS4D01G304400 | chr4A | 88.889 | 81 | 4 | 3 | 140 | 220 | 626307099 | 626307024 | 1.990000e-15 | 95.3 |
16 | TraesCS4D01G304400 | chr4A | 91.667 | 48 | 4 | 0 | 5230 | 5277 | 679971662 | 679971615 | 4.340000e-07 | 67.6 |
17 | TraesCS4D01G304400 | chr2D | 95.506 | 267 | 11 | 1 | 6441 | 6706 | 189689064 | 189689330 | 6.220000e-115 | 425.0 |
18 | TraesCS4D01G304400 | chr2D | 86.111 | 108 | 12 | 3 | 408 | 514 | 351973455 | 351973350 | 5.500000e-21 | 113.0 |
19 | TraesCS4D01G304400 | chr5D | 90.875 | 263 | 21 | 3 | 6446 | 6706 | 72364071 | 72364332 | 3.850000e-92 | 350.0 |
20 | TraesCS4D01G304400 | chr7D | 89.493 | 276 | 12 | 2 | 6448 | 6706 | 552324313 | 552324038 | 3.880000e-87 | 333.0 |
21 | TraesCS4D01G304400 | chr7D | 88.973 | 263 | 21 | 4 | 6446 | 6706 | 4171625 | 4171369 | 1.090000e-82 | 318.0 |
22 | TraesCS4D01G304400 | chr7D | 95.652 | 69 | 3 | 0 | 6377 | 6445 | 78412387 | 78412455 | 1.980000e-20 | 111.0 |
23 | TraesCS4D01G304400 | chr3D | 89.960 | 249 | 22 | 3 | 6460 | 6706 | 9132582 | 9132829 | 1.090000e-82 | 318.0 |
24 | TraesCS4D01G304400 | chr3D | 87.900 | 281 | 15 | 11 | 6446 | 6708 | 55365506 | 55365785 | 5.050000e-81 | 313.0 |
25 | TraesCS4D01G304400 | chr3D | 91.837 | 98 | 8 | 0 | 6609 | 6706 | 606927581 | 606927678 | 3.260000e-28 | 137.0 |
26 | TraesCS4D01G304400 | chr3D | 87.037 | 108 | 14 | 0 | 407 | 514 | 190256592 | 190256485 | 9.140000e-24 | 122.0 |
27 | TraesCS4D01G304400 | chr7A | 88.129 | 278 | 16 | 9 | 6446 | 6706 | 219167424 | 219167701 | 1.400000e-81 | 315.0 |
28 | TraesCS4D01G304400 | chr7A | 86.628 | 172 | 21 | 2 | 1261 | 1432 | 705061504 | 705061673 | 8.880000e-44 | 189.0 |
29 | TraesCS4D01G304400 | chr6D | 88.364 | 275 | 14 | 6 | 6446 | 6702 | 49803646 | 49803920 | 1.400000e-81 | 315.0 |
30 | TraesCS4D01G304400 | chr6D | 89.011 | 91 | 8 | 2 | 425 | 514 | 302113733 | 302113644 | 1.980000e-20 | 111.0 |
31 | TraesCS4D01G304400 | chr6D | 85.000 | 60 | 7 | 2 | 2088 | 2146 | 447045350 | 447045408 | 7.260000e-05 | 60.2 |
32 | TraesCS4D01G304400 | chr6A | 83.871 | 217 | 32 | 3 | 1923 | 2138 | 560695619 | 560695405 | 3.170000e-48 | 204.0 |
33 | TraesCS4D01G304400 | chr5A | 86.782 | 174 | 17 | 6 | 1261 | 1432 | 653053875 | 653054044 | 8.880000e-44 | 189.0 |
34 | TraesCS4D01G304400 | chr1B | 85.827 | 127 | 15 | 3 | 389 | 514 | 301273378 | 301273502 | 1.520000e-26 | 132.0 |
35 | TraesCS4D01G304400 | chr5B | 87.273 | 110 | 12 | 2 | 406 | 514 | 440275837 | 440275945 | 2.540000e-24 | 124.0 |
36 | TraesCS4D01G304400 | chr5B | 86.792 | 106 | 12 | 2 | 413 | 517 | 501957055 | 501956951 | 4.250000e-22 | 117.0 |
37 | TraesCS4D01G304400 | chr3A | 87.037 | 108 | 14 | 0 | 407 | 514 | 261350886 | 261350993 | 9.140000e-24 | 122.0 |
38 | TraesCS4D01G304400 | chr7B | 86.792 | 106 | 14 | 0 | 409 | 514 | 216938228 | 216938333 | 1.180000e-22 | 119.0 |
39 | TraesCS4D01G304400 | chr7B | 85.455 | 110 | 14 | 2 | 408 | 516 | 216938333 | 216938225 | 5.500000e-21 | 113.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G304400 | chr4D | 472925322 | 472932029 | 6707 | True | 12388.00 | 12388 | 100.0000 | 1 | 6708 | 1 | chr4D.!!$R3 | 6707 |
1 | TraesCS4D01G304400 | chr4D | 472879126 | 472880144 | 1018 | True | 887.00 | 887 | 82.8650 | 5269 | 6272 | 1 | chr4D.!!$R2 | 1003 |
2 | TraesCS4D01G304400 | chr4B | 595270491 | 595277139 | 6648 | True | 1673.00 | 6239 | 91.1058 | 4 | 6445 | 5 | chr4B.!!$R1 | 6441 |
3 | TraesCS4D01G304400 | chr4A | 679971615 | 679980229 | 8614 | True | 1631.32 | 4630 | 90.6440 | 29 | 6445 | 5 | chr4A.!!$R2 | 6416 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
513 | 594 | 0.032813 | AATTCCGGACGGAGGGAGTA | 60.033 | 55.000 | 13.64 | 0.00 | 46.06 | 2.59 | F |
677 | 857 | 0.522705 | ATGCGTAGTACGTGCAGTCG | 60.523 | 55.000 | 22.81 | 8.41 | 44.73 | 4.18 | F |
1516 | 1787 | 0.170116 | CAGCCGTCTCACTCTCAGTC | 59.830 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 | F |
2357 | 2919 | 0.445436 | CACCTGAGCGCAATCTCAAC | 59.555 | 55.000 | 11.47 | 0.00 | 41.99 | 3.18 | F |
3105 | 3674 | 1.064017 | TGCAAACCTTTGACCTGGTCT | 60.064 | 47.619 | 26.03 | 4.02 | 40.55 | 3.85 | F |
3193 | 3763 | 0.796312 | ATGCGTTTTCGGTAGCACTG | 59.204 | 50.000 | 0.00 | 0.00 | 42.73 | 3.66 | F |
3195 | 3765 | 1.226030 | GCGTTTTCGGTAGCACTGGT | 61.226 | 55.000 | 0.00 | 0.00 | 44.29 | 4.00 | F |
4711 | 5380 | 2.598439 | GCTCATATTTGTGAAGAGCGCG | 60.598 | 50.000 | 0.00 | 0.00 | 41.75 | 6.86 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1511 | 1782 | 0.609406 | CGGGGTGTGAGAGAGACTGA | 60.609 | 60.000 | 0.00 | 0.0 | 0.00 | 3.41 | R |
1819 | 2154 | 0.995024 | CAAGAGGTTGATCCCCAGGT | 59.005 | 55.000 | 1.75 | 0.0 | 35.46 | 4.00 | R |
3036 | 3605 | 1.228245 | ACAACGGGATGCAAGCACT | 60.228 | 52.632 | 0.00 | 0.0 | 0.00 | 4.40 | R |
3171 | 3740 | 1.727880 | GTGCTACCGAAAACGCATACA | 59.272 | 47.619 | 0.00 | 0.0 | 34.60 | 2.29 | R |
4835 | 5505 | 2.094762 | AACATACCACGAAGAGCACC | 57.905 | 50.000 | 0.00 | 0.0 | 0.00 | 5.01 | R |
5007 | 5677 | 2.345760 | GGCCTGCATGTTGTGAGGG | 61.346 | 63.158 | 0.00 | 0.0 | 0.00 | 4.30 | R |
5068 | 5738 | 2.777832 | ACATTGAGAGGAACAGGCTC | 57.222 | 50.000 | 0.00 | 0.0 | 0.00 | 4.70 | R |
6545 | 7308 | 0.250513 | CGGGAGGTTGAAGAAGGAGG | 59.749 | 60.000 | 0.00 | 0.0 | 0.00 | 4.30 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
68 | 69 | 0.389166 | CTCAGGCCACGAGTCTGTTC | 60.389 | 60.000 | 5.01 | 0.00 | 0.00 | 3.18 |
83 | 84 | 3.671716 | TCTGTTCGTGCAGACTAGAGTA | 58.328 | 45.455 | 0.00 | 0.00 | 40.23 | 2.59 |
84 | 85 | 3.685272 | TCTGTTCGTGCAGACTAGAGTAG | 59.315 | 47.826 | 0.00 | 0.00 | 40.23 | 2.57 |
85 | 86 | 3.671716 | TGTTCGTGCAGACTAGAGTAGA | 58.328 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
86 | 87 | 3.685272 | TGTTCGTGCAGACTAGAGTAGAG | 59.315 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
87 | 88 | 3.613494 | TCGTGCAGACTAGAGTAGAGT | 57.387 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
88 | 89 | 3.263261 | TCGTGCAGACTAGAGTAGAGTG | 58.737 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
89 | 90 | 2.353269 | CGTGCAGACTAGAGTAGAGTGG | 59.647 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
90 | 91 | 3.611970 | GTGCAGACTAGAGTAGAGTGGA | 58.388 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
91 | 92 | 4.011023 | GTGCAGACTAGAGTAGAGTGGAA | 58.989 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
92 | 93 | 4.459685 | GTGCAGACTAGAGTAGAGTGGAAA | 59.540 | 45.833 | 0.00 | 0.00 | 0.00 | 3.13 |
93 | 94 | 5.126384 | GTGCAGACTAGAGTAGAGTGGAAAT | 59.874 | 44.000 | 0.00 | 0.00 | 0.00 | 2.17 |
157 | 161 | 1.083401 | CAGTGTTGCTGTCGCGAAC | 60.083 | 57.895 | 12.06 | 5.49 | 40.27 | 3.95 |
161 | 165 | 1.132640 | GTTGCTGTCGCGAACCATC | 59.867 | 57.895 | 12.06 | 1.37 | 39.65 | 3.51 |
316 | 323 | 1.464734 | CACAACTCCCGCTCTCTCTA | 58.535 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
322 | 329 | 2.218603 | CTCCCGCTCTCTCTAGTCTTC | 58.781 | 57.143 | 0.00 | 0.00 | 0.00 | 2.87 |
365 | 373 | 1.483827 | AGTGAGTGATGCGATGACCAT | 59.516 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
366 | 374 | 1.596260 | GTGAGTGATGCGATGACCATG | 59.404 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
369 | 377 | 1.096967 | GTGATGCGATGACCATGCCA | 61.097 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
370 | 378 | 1.096967 | TGATGCGATGACCATGCCAC | 61.097 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
371 | 379 | 0.816825 | GATGCGATGACCATGCCACT | 60.817 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
372 | 380 | 0.816825 | ATGCGATGACCATGCCACTC | 60.817 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
373 | 381 | 2.528743 | GCGATGACCATGCCACTCG | 61.529 | 63.158 | 0.00 | 1.47 | 0.00 | 4.18 |
374 | 382 | 2.528743 | CGATGACCATGCCACTCGC | 61.529 | 63.158 | 0.00 | 0.00 | 38.31 | 5.03 |
376 | 384 | 1.153289 | ATGACCATGCCACTCGCTC | 60.153 | 57.895 | 0.00 | 0.00 | 38.78 | 5.03 |
377 | 385 | 2.512515 | GACCATGCCACTCGCTCC | 60.513 | 66.667 | 0.00 | 0.00 | 38.78 | 4.70 |
379 | 387 | 1.676678 | GACCATGCCACTCGCTCCTA | 61.677 | 60.000 | 0.00 | 0.00 | 38.78 | 2.94 |
380 | 388 | 1.068753 | CCATGCCACTCGCTCCTAG | 59.931 | 63.158 | 0.00 | 0.00 | 38.78 | 3.02 |
381 | 389 | 1.680522 | CCATGCCACTCGCTCCTAGT | 61.681 | 60.000 | 0.00 | 0.00 | 38.78 | 2.57 |
382 | 390 | 0.529337 | CATGCCACTCGCTCCTAGTG | 60.529 | 60.000 | 0.00 | 0.00 | 43.26 | 2.74 |
385 | 393 | 4.019983 | CACTCGCTCCTAGTGGGT | 57.980 | 61.111 | 0.00 | 0.00 | 40.69 | 4.51 |
394 | 402 | 1.672356 | CCTAGTGGGTGCTGTGTGC | 60.672 | 63.158 | 0.00 | 0.00 | 43.25 | 4.57 |
413 | 494 | 5.793457 | GTGTGCGTTGATTTTTCATACTACC | 59.207 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
416 | 497 | 6.092259 | GTGCGTTGATTTTTCATACTACCTCT | 59.908 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
420 | 501 | 7.545965 | CGTTGATTTTTCATACTACCTCTGTCT | 59.454 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
421 | 502 | 8.660373 | GTTGATTTTTCATACTACCTCTGTCTG | 58.340 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
428 | 509 | 9.871238 | TTTCATACTACCTCTGTCTGAAATTAC | 57.129 | 33.333 | 0.00 | 0.00 | 36.38 | 1.89 |
436 | 517 | 4.883083 | TCTGTCTGAAATTACTTGTCGCT | 58.117 | 39.130 | 0.00 | 0.00 | 0.00 | 4.93 |
438 | 519 | 4.627058 | TGTCTGAAATTACTTGTCGCTCA | 58.373 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
439 | 520 | 5.053811 | TGTCTGAAATTACTTGTCGCTCAA | 58.946 | 37.500 | 0.00 | 0.00 | 34.61 | 3.02 |
440 | 521 | 5.525745 | TGTCTGAAATTACTTGTCGCTCAAA | 59.474 | 36.000 | 0.00 | 0.00 | 35.48 | 2.69 |
441 | 522 | 5.846473 | GTCTGAAATTACTTGTCGCTCAAAC | 59.154 | 40.000 | 0.00 | 0.00 | 35.48 | 2.93 |
442 | 523 | 4.768145 | TGAAATTACTTGTCGCTCAAACG | 58.232 | 39.130 | 0.00 | 0.00 | 35.48 | 3.60 |
445 | 526 | 2.736144 | TACTTGTCGCTCAAACGGAT | 57.264 | 45.000 | 0.00 | 0.00 | 35.48 | 4.18 |
446 | 527 | 1.148310 | ACTTGTCGCTCAAACGGATG | 58.852 | 50.000 | 0.00 | 0.00 | 35.48 | 3.51 |
447 | 528 | 1.148310 | CTTGTCGCTCAAACGGATGT | 58.852 | 50.000 | 0.00 | 0.00 | 35.48 | 3.06 |
449 | 530 | 2.665649 | TGTCGCTCAAACGGATGTAT | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 2.29 |
450 | 531 | 2.536365 | TGTCGCTCAAACGGATGTATC | 58.464 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
451 | 532 | 2.165641 | TGTCGCTCAAACGGATGTATCT | 59.834 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
452 | 533 | 3.379057 | TGTCGCTCAAACGGATGTATCTA | 59.621 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
455 | 536 | 3.975670 | CGCTCAAACGGATGTATCTAGAC | 59.024 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
456 | 537 | 4.261238 | CGCTCAAACGGATGTATCTAGACT | 60.261 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
458 | 539 | 6.512903 | CGCTCAAACGGATGTATCTAGACTTA | 60.513 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
459 | 540 | 7.371936 | GCTCAAACGGATGTATCTAGACTTAT | 58.628 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
467 | 548 | 8.651588 | CGGATGTATCTAGACTTATTTTCATGC | 58.348 | 37.037 | 0.00 | 0.00 | 0.00 | 4.06 |
487 | 568 | 7.584108 | TCATGCTAAATACATCCATTTAAGCG | 58.416 | 34.615 | 0.00 | 0.00 | 32.80 | 4.68 |
488 | 569 | 7.443879 | TCATGCTAAATACATCCATTTAAGCGA | 59.556 | 33.333 | 0.00 | 0.00 | 32.80 | 4.93 |
494 | 575 | 8.445275 | AAATACATCCATTTAAGCGACATGTA | 57.555 | 30.769 | 0.00 | 0.00 | 31.61 | 2.29 |
497 | 578 | 7.333528 | ACATCCATTTAAGCGACATGTAATT | 57.666 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
499 | 580 | 6.371809 | TCCATTTAAGCGACATGTAATTCC | 57.628 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
500 | 581 | 5.007234 | TCCATTTAAGCGACATGTAATTCCG | 59.993 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
501 | 582 | 4.868450 | TTTAAGCGACATGTAATTCCGG | 57.132 | 40.909 | 0.00 | 0.00 | 0.00 | 5.14 |
502 | 583 | 2.684001 | AAGCGACATGTAATTCCGGA | 57.316 | 45.000 | 0.00 | 0.00 | 0.00 | 5.14 |
503 | 584 | 1.935933 | AGCGACATGTAATTCCGGAC | 58.064 | 50.000 | 1.83 | 0.00 | 0.00 | 4.79 |
504 | 585 | 0.575390 | GCGACATGTAATTCCGGACG | 59.425 | 55.000 | 1.83 | 1.53 | 0.00 | 4.79 |
505 | 586 | 1.205657 | CGACATGTAATTCCGGACGG | 58.794 | 55.000 | 1.83 | 3.96 | 0.00 | 4.79 |
506 | 587 | 1.202325 | CGACATGTAATTCCGGACGGA | 60.202 | 52.381 | 1.83 | 9.76 | 43.52 | 4.69 |
507 | 588 | 2.470821 | GACATGTAATTCCGGACGGAG | 58.529 | 52.381 | 13.64 | 3.15 | 46.06 | 4.63 |
508 | 589 | 1.138266 | ACATGTAATTCCGGACGGAGG | 59.862 | 52.381 | 13.64 | 0.00 | 46.06 | 4.30 |
509 | 590 | 0.756903 | ATGTAATTCCGGACGGAGGG | 59.243 | 55.000 | 13.64 | 0.00 | 46.06 | 4.30 |
510 | 591 | 0.324552 | TGTAATTCCGGACGGAGGGA | 60.325 | 55.000 | 13.64 | 0.00 | 46.06 | 4.20 |
511 | 592 | 0.388294 | GTAATTCCGGACGGAGGGAG | 59.612 | 60.000 | 13.64 | 0.00 | 46.06 | 4.30 |
513 | 594 | 0.032813 | AATTCCGGACGGAGGGAGTA | 60.033 | 55.000 | 13.64 | 0.00 | 46.06 | 2.59 |
514 | 595 | 0.032813 | ATTCCGGACGGAGGGAGTAA | 60.033 | 55.000 | 13.64 | 0.00 | 46.06 | 2.24 |
515 | 596 | 0.032813 | TTCCGGACGGAGGGAGTAAT | 60.033 | 55.000 | 13.64 | 0.00 | 46.06 | 1.89 |
516 | 597 | 0.846015 | TCCGGACGGAGGGAGTAATA | 59.154 | 55.000 | 9.76 | 0.00 | 39.76 | 0.98 |
517 | 598 | 0.957362 | CCGGACGGAGGGAGTAATAC | 59.043 | 60.000 | 4.40 | 0.00 | 37.50 | 1.89 |
518 | 599 | 1.478288 | CCGGACGGAGGGAGTAATACT | 60.478 | 57.143 | 4.40 | 0.00 | 37.50 | 2.12 |
537 | 618 | 9.863845 | GTAATACTCCCTCTGAAATATAAGAGC | 57.136 | 37.037 | 5.02 | 0.00 | 38.91 | 4.09 |
538 | 619 | 5.461032 | ACTCCCTCTGAAATATAAGAGCG | 57.539 | 43.478 | 5.02 | 0.00 | 38.91 | 5.03 |
539 | 620 | 4.896482 | ACTCCCTCTGAAATATAAGAGCGT | 59.104 | 41.667 | 5.02 | 1.05 | 38.91 | 5.07 |
540 | 621 | 5.364157 | ACTCCCTCTGAAATATAAGAGCGTT | 59.636 | 40.000 | 5.02 | 0.00 | 38.91 | 4.84 |
544 | 625 | 7.287005 | TCCCTCTGAAATATAAGAGCGTTTAGA | 59.713 | 37.037 | 5.02 | 0.00 | 38.91 | 2.10 |
548 | 724 | 9.871238 | TCTGAAATATAAGAGCGTTTAGAACTT | 57.129 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
555 | 731 | 8.828688 | ATAAGAGCGTTTAGAACTTTAACTGT | 57.171 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
562 | 738 | 7.570691 | GCGTTTAGAACTTTAACTGTAGCATGT | 60.571 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
567 | 743 | 7.161404 | AGAACTTTAACTGTAGCATGTCATCA | 58.839 | 34.615 | 0.00 | 0.00 | 0.00 | 3.07 |
579 | 757 | 1.114627 | TGTCATCATGAGAGACCCCG | 58.885 | 55.000 | 21.60 | 0.00 | 0.00 | 5.73 |
668 | 848 | 4.273480 | AGCCAAATCAATCATGCGTAGTAC | 59.727 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
669 | 849 | 4.761745 | CCAAATCAATCATGCGTAGTACG | 58.238 | 43.478 | 18.37 | 18.37 | 45.88 | 3.67 |
670 | 850 | 4.270084 | CCAAATCAATCATGCGTAGTACGT | 59.730 | 41.667 | 22.81 | 2.17 | 44.73 | 3.57 |
671 | 851 | 5.190342 | CAAATCAATCATGCGTAGTACGTG | 58.810 | 41.667 | 22.81 | 14.56 | 44.73 | 4.49 |
672 | 852 | 2.190161 | TCAATCATGCGTAGTACGTGC | 58.810 | 47.619 | 22.81 | 8.72 | 44.73 | 5.34 |
673 | 853 | 1.923864 | CAATCATGCGTAGTACGTGCA | 59.076 | 47.619 | 22.81 | 14.01 | 44.73 | 4.57 |
675 | 855 | 0.524414 | TCATGCGTAGTACGTGCAGT | 59.476 | 50.000 | 22.81 | 3.54 | 44.73 | 4.40 |
676 | 856 | 0.914551 | CATGCGTAGTACGTGCAGTC | 59.085 | 55.000 | 22.81 | 6.67 | 44.73 | 3.51 |
677 | 857 | 0.522705 | ATGCGTAGTACGTGCAGTCG | 60.523 | 55.000 | 22.81 | 8.41 | 44.73 | 4.18 |
697 | 877 | 1.616994 | GGCCTTAAACCAGTGATGGCT | 60.617 | 52.381 | 0.00 | 0.00 | 38.93 | 4.75 |
704 | 884 | 3.200593 | CAGTGATGGCTGGAGCGC | 61.201 | 66.667 | 0.00 | 0.00 | 43.26 | 5.92 |
731 | 916 | 2.752358 | CCTGGCTTGTCCTGCAGA | 59.248 | 61.111 | 17.39 | 0.00 | 35.26 | 4.26 |
847 | 1040 | 4.278956 | CCGCAGCTTCGGTTAAGT | 57.721 | 55.556 | 17.25 | 0.00 | 44.18 | 2.24 |
878 | 1071 | 1.300233 | GCGCGACTATTCCTCCCTG | 60.300 | 63.158 | 12.10 | 0.00 | 0.00 | 4.45 |
1060 | 1275 | 3.839432 | CGGAGAAGACCCCGCCTC | 61.839 | 72.222 | 0.00 | 0.00 | 39.22 | 4.70 |
1339 | 1610 | 1.152989 | TTGTGTCGTAACCCGTGTGC | 61.153 | 55.000 | 0.00 | 0.00 | 37.94 | 4.57 |
1508 | 1779 | 0.868406 | CAAAAGGTCAGCCGTCTCAC | 59.132 | 55.000 | 0.00 | 0.00 | 40.50 | 3.51 |
1509 | 1780 | 0.759346 | AAAAGGTCAGCCGTCTCACT | 59.241 | 50.000 | 0.00 | 0.00 | 40.50 | 3.41 |
1510 | 1781 | 0.318762 | AAAGGTCAGCCGTCTCACTC | 59.681 | 55.000 | 0.00 | 0.00 | 40.50 | 3.51 |
1511 | 1782 | 0.540830 | AAGGTCAGCCGTCTCACTCT | 60.541 | 55.000 | 0.00 | 0.00 | 40.50 | 3.24 |
1512 | 1783 | 0.963355 | AGGTCAGCCGTCTCACTCTC | 60.963 | 60.000 | 0.00 | 0.00 | 40.50 | 3.20 |
1513 | 1784 | 1.244697 | GGTCAGCCGTCTCACTCTCA | 61.245 | 60.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1516 | 1787 | 0.170116 | CAGCCGTCTCACTCTCAGTC | 59.830 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1532 | 1803 | 2.680352 | TCTCTCTCACACCCCGCC | 60.680 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
1536 | 1807 | 3.934391 | CTCTCACACCCCGCCGTTC | 62.934 | 68.421 | 0.00 | 0.00 | 0.00 | 3.95 |
1550 | 1821 | 3.795101 | CCGCCGTTCAAGTAATACTACTG | 59.205 | 47.826 | 0.00 | 0.00 | 38.43 | 2.74 |
1551 | 1822 | 3.795101 | CGCCGTTCAAGTAATACTACTGG | 59.205 | 47.826 | 0.00 | 0.00 | 38.43 | 4.00 |
1600 | 1919 | 2.983879 | AAGGGAAGATGGTGGGCGG | 61.984 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
1628 | 1947 | 7.342799 | TCCTTGATTTGAGCTAATAATTGCCTT | 59.657 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
1630 | 1949 | 7.643569 | TGATTTGAGCTAATAATTGCCTTCA | 57.356 | 32.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1653 | 1972 | 0.584396 | TTGCGGAGTTGCGTGTAAAG | 59.416 | 50.000 | 0.00 | 0.00 | 37.81 | 1.85 |
1668 | 1988 | 3.621268 | GTGTAAAGACAGTGTGTGAGCAA | 59.379 | 43.478 | 0.00 | 0.00 | 35.82 | 3.91 |
1684 | 2004 | 4.276926 | GTGAGCAAACTCTTGAAGGACAAT | 59.723 | 41.667 | 0.00 | 0.00 | 43.85 | 2.71 |
1685 | 2005 | 4.889409 | TGAGCAAACTCTTGAAGGACAATT | 59.111 | 37.500 | 0.00 | 0.00 | 43.85 | 2.32 |
1697 | 2017 | 2.787994 | AGGACAATTGGAAGAGCAGTG | 58.212 | 47.619 | 10.83 | 0.00 | 0.00 | 3.66 |
1699 | 2022 | 2.485814 | GGACAATTGGAAGAGCAGTGTC | 59.514 | 50.000 | 10.83 | 0.00 | 34.52 | 3.67 |
1745 | 2068 | 4.836125 | TTTCAAGGAGATGTGCTTTGAC | 57.164 | 40.909 | 0.00 | 0.00 | 30.60 | 3.18 |
1819 | 2154 | 6.916360 | AAGATTGCTTATTTTTGGTCAGGA | 57.084 | 33.333 | 0.00 | 0.00 | 31.07 | 3.86 |
1842 | 2177 | 1.034292 | GGGGATCAACCTCTTGCAGC | 61.034 | 60.000 | 0.00 | 0.00 | 35.94 | 5.25 |
1875 | 2210 | 3.979948 | TGCTGTGTGGAAATCATGTTTG | 58.020 | 40.909 | 0.00 | 0.00 | 0.00 | 2.93 |
2035 | 2594 | 8.783093 | TCACTGAAAACTTCATTCAAATACGAT | 58.217 | 29.630 | 0.00 | 0.00 | 39.30 | 3.73 |
2041 | 2600 | 9.927668 | AAAACTTCATTCAAATACGATTCCAAT | 57.072 | 25.926 | 0.00 | 0.00 | 0.00 | 3.16 |
2081 | 2640 | 7.736880 | CGACATGTCACTTTTATTTTGCAAATG | 59.263 | 33.333 | 24.93 | 6.53 | 0.00 | 2.32 |
2161 | 2720 | 7.308469 | CGGAGGTAGTATTAGATTGGTACTGAC | 60.308 | 44.444 | 0.00 | 0.00 | 31.58 | 3.51 |
2183 | 2742 | 3.430651 | CCAGTGACCAACATTTTGCAACT | 60.431 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2184 | 2743 | 3.798337 | CAGTGACCAACATTTTGCAACTC | 59.202 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2185 | 2744 | 3.701040 | AGTGACCAACATTTTGCAACTCT | 59.299 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
2186 | 2745 | 4.887071 | AGTGACCAACATTTTGCAACTCTA | 59.113 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2187 | 2746 | 5.009010 | AGTGACCAACATTTTGCAACTCTAG | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2259 | 2820 | 2.154462 | CTTGGACTTCCATTGACGCTT | 58.846 | 47.619 | 0.00 | 0.00 | 46.97 | 4.68 |
2260 | 2821 | 1.808411 | TGGACTTCCATTGACGCTTC | 58.192 | 50.000 | 0.00 | 0.00 | 42.01 | 3.86 |
2357 | 2919 | 0.445436 | CACCTGAGCGCAATCTCAAC | 59.555 | 55.000 | 11.47 | 0.00 | 41.99 | 3.18 |
2424 | 2986 | 6.683715 | TGATTACGATGAATCAATACGCCTA | 58.316 | 36.000 | 8.87 | 0.00 | 41.70 | 3.93 |
2425 | 2987 | 6.806739 | TGATTACGATGAATCAATACGCCTAG | 59.193 | 38.462 | 8.87 | 0.00 | 41.70 | 3.02 |
2532 | 3094 | 3.307480 | CGAAACTTCCCTTGGGATACTGT | 60.307 | 47.826 | 9.48 | 4.15 | 0.00 | 3.55 |
2677 | 3245 | 2.226437 | CAGGTTTCTACACACATGCCAC | 59.774 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2686 | 3254 | 1.285641 | CACATGCCACGAAACCACC | 59.714 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
2692 | 3260 | 1.512156 | GCCACGAAACCACCGAATGT | 61.512 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2697 | 3265 | 2.298163 | ACGAAACCACCGAATGTACTCT | 59.702 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
2758 | 3327 | 3.427098 | GCGTTACAAAGTTATGAAGGGGC | 60.427 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
2781 | 3350 | 1.335142 | GGTCGCCACAAAACGCATTAA | 60.335 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
2782 | 3351 | 1.976045 | GTCGCCACAAAACGCATTAAG | 59.024 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
2821 | 3390 | 7.645340 | GGTTATATCACAGAATGCATGTTGTTC | 59.355 | 37.037 | 12.28 | 1.65 | 42.53 | 3.18 |
2827 | 3396 | 4.581824 | ACAGAATGCATGTTGTTCTCTGTT | 59.418 | 37.500 | 18.00 | 6.77 | 42.53 | 3.16 |
2828 | 3397 | 5.152097 | CAGAATGCATGTTGTTCTCTGTTC | 58.848 | 41.667 | 12.24 | 0.00 | 30.19 | 3.18 |
2829 | 3398 | 4.217118 | AGAATGCATGTTGTTCTCTGTTCC | 59.783 | 41.667 | 0.00 | 0.00 | 0.00 | 3.62 |
2830 | 3399 | 2.929641 | TGCATGTTGTTCTCTGTTCCA | 58.070 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
2831 | 3400 | 3.489355 | TGCATGTTGTTCTCTGTTCCAT | 58.511 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
2832 | 3401 | 3.890756 | TGCATGTTGTTCTCTGTTCCATT | 59.109 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2833 | 3402 | 4.232221 | GCATGTTGTTCTCTGTTCCATTG | 58.768 | 43.478 | 0.00 | 0.00 | 0.00 | 2.82 |
2834 | 3403 | 4.261741 | GCATGTTGTTCTCTGTTCCATTGT | 60.262 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
2835 | 3404 | 5.048782 | GCATGTTGTTCTCTGTTCCATTGTA | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2836 | 3405 | 6.349611 | GCATGTTGTTCTCTGTTCCATTGTAT | 60.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2837 | 3406 | 6.801539 | TGTTGTTCTCTGTTCCATTGTATC | 57.198 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
2861 | 3430 | 6.611236 | TCTCCATTGTATCTTCCACACTATCA | 59.389 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
2868 | 3437 | 8.722480 | TGTATCTTCCACACTATCATTCTTTG | 57.278 | 34.615 | 0.00 | 0.00 | 0.00 | 2.77 |
3105 | 3674 | 1.064017 | TGCAAACCTTTGACCTGGTCT | 60.064 | 47.619 | 26.03 | 4.02 | 40.55 | 3.85 |
3186 | 3755 | 4.023536 | ACAGAATTTGTATGCGTTTTCGGT | 60.024 | 37.500 | 0.00 | 0.00 | 40.18 | 4.69 |
3187 | 3756 | 5.179742 | ACAGAATTTGTATGCGTTTTCGGTA | 59.820 | 36.000 | 0.00 | 0.00 | 40.18 | 4.02 |
3193 | 3763 | 0.796312 | ATGCGTTTTCGGTAGCACTG | 59.204 | 50.000 | 0.00 | 0.00 | 42.73 | 3.66 |
3195 | 3765 | 1.226030 | GCGTTTTCGGTAGCACTGGT | 61.226 | 55.000 | 0.00 | 0.00 | 44.29 | 4.00 |
3460 | 4033 | 4.328169 | GGCATTACAAAGTAGTACGGACAC | 59.672 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
3464 | 4037 | 4.677673 | ACAAAGTAGTACGGACACCTTT | 57.322 | 40.909 | 0.00 | 4.64 | 31.58 | 3.11 |
3543 | 4116 | 7.589954 | ACTTTGTTAACAAAAATAGCAGCTACG | 59.410 | 33.333 | 28.52 | 16.94 | 44.24 | 3.51 |
3580 | 4153 | 6.150976 | ACAGTTGTGTCATTCTTCAGTGAAAA | 59.849 | 34.615 | 7.06 | 5.17 | 26.76 | 2.29 |
3714 | 4287 | 7.827819 | ATTCAATTCAAATGAGCAGACAATG | 57.172 | 32.000 | 0.00 | 0.00 | 0.00 | 2.82 |
3732 | 4305 | 6.925165 | AGACAATGTTTTGATGTTAGGCAAAG | 59.075 | 34.615 | 0.00 | 0.00 | 35.64 | 2.77 |
3735 | 4308 | 5.606348 | TGTTTTGATGTTAGGCAAAGGTT | 57.394 | 34.783 | 0.00 | 0.00 | 35.64 | 3.50 |
3736 | 4309 | 5.355596 | TGTTTTGATGTTAGGCAAAGGTTG | 58.644 | 37.500 | 0.00 | 0.00 | 35.64 | 3.77 |
3857 | 4430 | 3.475566 | TCATAGAGTGCATTACTGGGC | 57.524 | 47.619 | 0.00 | 0.00 | 40.53 | 5.36 |
3869 | 4442 | 4.702131 | GCATTACTGGGCCTGGAATATAAG | 59.298 | 45.833 | 19.31 | 9.32 | 0.00 | 1.73 |
3903 | 4476 | 7.629157 | TGTGATACATTTGTAGATTCAAGGGA | 58.371 | 34.615 | 0.00 | 0.00 | 33.52 | 4.20 |
4159 | 4732 | 6.202331 | TGGTGGAAAGGATCAGTCTATTCTA | 58.798 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4166 | 4739 | 4.591072 | AGGATCAGTCTATTCTACAAGGCC | 59.409 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
4669 | 5338 | 7.387673 | TGATGAAAAGGTACACAACTGTATCAG | 59.612 | 37.037 | 0.00 | 0.00 | 36.55 | 2.90 |
4711 | 5380 | 2.598439 | GCTCATATTTGTGAAGAGCGCG | 60.598 | 50.000 | 0.00 | 0.00 | 41.75 | 6.86 |
4980 | 5650 | 5.780282 | AGCATAGCTGGATACACCTAACATA | 59.220 | 40.000 | 0.00 | 0.00 | 46.17 | 2.29 |
5007 | 5677 | 4.228912 | ACAACATTAAGTGTGCTGAAGC | 57.771 | 40.909 | 0.00 | 0.00 | 41.14 | 3.86 |
5068 | 5738 | 4.109050 | GTCTTCTAGGAACAGCAAGATCG | 58.891 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
5107 | 5777 | 2.011741 | ATTGCGCATCTGCATGGTGG | 62.012 | 55.000 | 12.75 | 0.00 | 45.78 | 4.61 |
5176 | 5846 | 1.228124 | CGCCAACCTCCCTTGTTGA | 60.228 | 57.895 | 4.79 | 0.00 | 44.57 | 3.18 |
5208 | 5878 | 9.350357 | CAATTCATGGTGTTTCTTTCTCTATTG | 57.650 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
5257 | 5927 | 1.068472 | ACCTTCGAGAAGTGCAGTACG | 60.068 | 52.381 | 11.38 | 1.88 | 36.72 | 3.67 |
5303 | 5973 | 2.102588 | AGTGAAGACGCACAGTTTACCT | 59.897 | 45.455 | 0.00 | 0.00 | 41.19 | 3.08 |
5325 | 6000 | 4.913126 | GACCAAGCGTAGTCCAGG | 57.087 | 61.111 | 0.00 | 0.00 | 0.00 | 4.45 |
5548 | 6280 | 1.233285 | GCATGGCCACCTCGATCATC | 61.233 | 60.000 | 8.16 | 0.00 | 0.00 | 2.92 |
5626 | 6358 | 1.298340 | CTGGGTATTCGGTGTGCCA | 59.702 | 57.895 | 0.00 | 0.00 | 34.09 | 4.92 |
5769 | 6504 | 2.834638 | ATTCCTCTCCAATGGGGTTG | 57.165 | 50.000 | 0.00 | 0.00 | 38.11 | 3.77 |
5770 | 6505 | 1.455822 | TTCCTCTCCAATGGGGTTGT | 58.544 | 50.000 | 0.00 | 0.00 | 36.01 | 3.32 |
5771 | 6506 | 0.698238 | TCCTCTCCAATGGGGTTGTG | 59.302 | 55.000 | 0.00 | 0.00 | 36.01 | 3.33 |
5772 | 6507 | 0.698238 | CCTCTCCAATGGGGTTGTGA | 59.302 | 55.000 | 0.00 | 0.00 | 36.01 | 3.58 |
5809 | 6544 | 6.239176 | GCAAGAGTAGATAGGCACATTAGACT | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 3.24 |
5827 | 6562 | 5.546621 | AGACTGGTTCTTGTAGCTTACAA | 57.453 | 39.130 | 0.00 | 0.00 | 45.66 | 2.41 |
5928 | 6665 | 5.651387 | TTGATTTATCGGAAACCAATGCA | 57.349 | 34.783 | 0.00 | 0.00 | 0.00 | 3.96 |
5940 | 6677 | 1.843368 | CCAATGCACTGGTTCAGGAT | 58.157 | 50.000 | 5.89 | 0.00 | 35.51 | 3.24 |
6008 | 6746 | 0.329261 | TGCCTGAGAATGGAACCCTG | 59.671 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6009 | 6747 | 0.394899 | GCCTGAGAATGGAACCCTGG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6053 | 6791 | 2.736721 | TCGCATTGTAACTTCTGACTGC | 59.263 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
6092 | 6838 | 7.730364 | TTCAGTCTAGTTCAGTTCAATTTCC | 57.270 | 36.000 | 0.00 | 0.00 | 0.00 | 3.13 |
6100 | 6846 | 6.974965 | AGTTCAGTTCAATTTCCTGTGAATC | 58.025 | 36.000 | 0.00 | 0.00 | 36.23 | 2.52 |
6130 | 6877 | 3.066760 | CACACTCCCCAAGTTCTGAAAAC | 59.933 | 47.826 | 0.00 | 0.00 | 35.45 | 2.43 |
6251 | 7003 | 1.695242 | TGAGGTTCAGCGGGTTAAAGA | 59.305 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
6296 | 7051 | 6.467723 | TTTTTCTATGAGCGTCAGAAGTTC | 57.532 | 37.500 | 0.00 | 0.00 | 30.43 | 3.01 |
6297 | 7052 | 3.406728 | TCTATGAGCGTCAGAAGTTCG | 57.593 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
6298 | 7053 | 2.097629 | TCTATGAGCGTCAGAAGTTCGG | 59.902 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6341 | 7104 | 6.393171 | CCAGGAAGAAGAAATTTCACAATCC | 58.607 | 40.000 | 19.99 | 18.88 | 0.00 | 3.01 |
6344 | 7107 | 8.146412 | CAGGAAGAAGAAATTTCACAATCCTTT | 58.854 | 33.333 | 22.58 | 8.25 | 31.45 | 3.11 |
6346 | 7109 | 9.330063 | GGAAGAAGAAATTTCACAATCCTTTTT | 57.670 | 29.630 | 19.99 | 5.46 | 0.00 | 1.94 |
6445 | 7208 | 4.621034 | GGCACACCAATCTGAAATTTTACG | 59.379 | 41.667 | 0.00 | 0.00 | 35.26 | 3.18 |
6446 | 7209 | 4.621034 | GCACACCAATCTGAAATTTTACGG | 59.379 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
6448 | 7211 | 4.173256 | CACCAATCTGAAATTTTACGGGC | 58.827 | 43.478 | 0.00 | 0.00 | 0.00 | 6.13 |
6449 | 7212 | 3.829601 | ACCAATCTGAAATTTTACGGGCA | 59.170 | 39.130 | 0.00 | 0.00 | 0.00 | 5.36 |
6450 | 7213 | 4.082245 | ACCAATCTGAAATTTTACGGGCAG | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
6451 | 7214 | 4.082245 | CCAATCTGAAATTTTACGGGCAGT | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
6452 | 7215 | 4.701956 | ATCTGAAATTTTACGGGCAGTG | 57.298 | 40.909 | 0.00 | 0.00 | 0.00 | 3.66 |
6454 | 7217 | 4.331968 | TCTGAAATTTTACGGGCAGTGAT | 58.668 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
6457 | 7220 | 4.155826 | TGAAATTTTACGGGCAGTGATCTG | 59.844 | 41.667 | 0.00 | 0.00 | 43.87 | 2.90 |
6495 | 7258 | 3.299977 | GGTTGGGCCGGTCAAACC | 61.300 | 66.667 | 29.20 | 29.20 | 34.05 | 3.27 |
6496 | 7259 | 3.299977 | GTTGGGCCGGTCAAACCC | 61.300 | 66.667 | 15.93 | 11.24 | 44.52 | 4.11 |
6497 | 7260 | 4.607025 | TTGGGCCGGTCAAACCCC | 62.607 | 66.667 | 9.07 | 7.06 | 43.54 | 4.95 |
6503 | 7266 | 4.636435 | CGGTCAAACCCCAGCCGT | 62.636 | 66.667 | 0.00 | 0.00 | 37.87 | 5.68 |
6504 | 7267 | 2.671963 | GGTCAAACCCCAGCCGTC | 60.672 | 66.667 | 0.00 | 0.00 | 30.04 | 4.79 |
6506 | 7269 | 1.966451 | GTCAAACCCCAGCCGTCAG | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
6507 | 7270 | 2.144078 | TCAAACCCCAGCCGTCAGA | 61.144 | 57.895 | 0.00 | 0.00 | 0.00 | 3.27 |
6509 | 7272 | 1.026718 | CAAACCCCAGCCGTCAGATC | 61.027 | 60.000 | 0.00 | 0.00 | 0.00 | 2.75 |
6512 | 7275 | 2.503061 | CCCAGCCGTCAGATCTGG | 59.497 | 66.667 | 22.42 | 8.05 | 45.24 | 3.86 |
6513 | 7276 | 2.362369 | CCCAGCCGTCAGATCTGGT | 61.362 | 63.158 | 22.42 | 0.00 | 44.41 | 4.00 |
6515 | 7278 | 0.460987 | CCAGCCGTCAGATCTGGTTC | 60.461 | 60.000 | 22.42 | 12.04 | 41.76 | 3.62 |
6517 | 7280 | 1.153349 | GCCGTCAGATCTGGTTCCC | 60.153 | 63.158 | 22.42 | 4.48 | 0.00 | 3.97 |
6518 | 7281 | 1.617947 | GCCGTCAGATCTGGTTCCCT | 61.618 | 60.000 | 22.42 | 0.00 | 0.00 | 4.20 |
6519 | 7282 | 0.176680 | CCGTCAGATCTGGTTCCCTG | 59.823 | 60.000 | 22.42 | 5.09 | 0.00 | 4.45 |
6520 | 7283 | 0.460987 | CGTCAGATCTGGTTCCCTGC | 60.461 | 60.000 | 22.42 | 2.94 | 0.00 | 4.85 |
6521 | 7284 | 0.615331 | GTCAGATCTGGTTCCCTGCA | 59.385 | 55.000 | 22.42 | 0.00 | 0.00 | 4.41 |
6522 | 7285 | 0.615331 | TCAGATCTGGTTCCCTGCAC | 59.385 | 55.000 | 22.42 | 0.00 | 0.00 | 4.57 |
6524 | 7287 | 1.450312 | GATCTGGTTCCCTGCACCG | 60.450 | 63.158 | 0.00 | 0.00 | 37.07 | 4.94 |
6525 | 7288 | 2.185310 | GATCTGGTTCCCTGCACCGT | 62.185 | 60.000 | 0.00 | 0.00 | 37.07 | 4.83 |
6526 | 7289 | 2.185310 | ATCTGGTTCCCTGCACCGTC | 62.185 | 60.000 | 0.00 | 0.00 | 37.07 | 4.79 |
6528 | 7291 | 2.358737 | GGTTCCCTGCACCGTCAG | 60.359 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
6529 | 7292 | 2.741092 | GTTCCCTGCACCGTCAGA | 59.259 | 61.111 | 0.00 | 0.00 | 36.19 | 3.27 |
6531 | 7294 | 0.741221 | GTTCCCTGCACCGTCAGATC | 60.741 | 60.000 | 0.00 | 0.00 | 36.19 | 2.75 |
6532 | 7295 | 1.899437 | TTCCCTGCACCGTCAGATCC | 61.899 | 60.000 | 0.00 | 0.00 | 36.19 | 3.36 |
6533 | 7296 | 2.187946 | CCTGCACCGTCAGATCCC | 59.812 | 66.667 | 0.00 | 0.00 | 36.19 | 3.85 |
6534 | 7297 | 2.362369 | CCTGCACCGTCAGATCCCT | 61.362 | 63.158 | 0.00 | 0.00 | 36.19 | 4.20 |
6535 | 7298 | 1.599047 | CTGCACCGTCAGATCCCTT | 59.401 | 57.895 | 0.00 | 0.00 | 36.19 | 3.95 |
6536 | 7299 | 0.460987 | CTGCACCGTCAGATCCCTTC | 60.461 | 60.000 | 0.00 | 0.00 | 36.19 | 3.46 |
6537 | 7300 | 1.153349 | GCACCGTCAGATCCCTTCC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
6538 | 7301 | 1.522569 | CACCGTCAGATCCCTTCCC | 59.477 | 63.158 | 0.00 | 0.00 | 0.00 | 3.97 |
6540 | 7303 | 2.444256 | CCGTCAGATCCCTTCCCCC | 61.444 | 68.421 | 0.00 | 0.00 | 0.00 | 5.40 |
6555 | 7318 | 2.302019 | CCCCCTCACCTCCTTCTTC | 58.698 | 63.158 | 0.00 | 0.00 | 0.00 | 2.87 |
6556 | 7319 | 0.547712 | CCCCCTCACCTCCTTCTTCA | 60.548 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6558 | 7321 | 1.003696 | CCCCTCACCTCCTTCTTCAAC | 59.996 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
6559 | 7322 | 1.003696 | CCCTCACCTCCTTCTTCAACC | 59.996 | 57.143 | 0.00 | 0.00 | 0.00 | 3.77 |
6561 | 7324 | 2.027653 | CCTCACCTCCTTCTTCAACCTC | 60.028 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
6562 | 7325 | 1.978580 | TCACCTCCTTCTTCAACCTCC | 59.021 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
6563 | 7326 | 1.003696 | CACCTCCTTCTTCAACCTCCC | 59.996 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
6564 | 7327 | 0.250513 | CCTCCTTCTTCAACCTCCCG | 59.749 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
6566 | 7329 | 1.125093 | TCCTTCTTCAACCTCCCGCA | 61.125 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
6567 | 7330 | 0.955919 | CCTTCTTCAACCTCCCGCAC | 60.956 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
6568 | 7331 | 1.291877 | CTTCTTCAACCTCCCGCACG | 61.292 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
6569 | 7332 | 2.725203 | TTCTTCAACCTCCCGCACGG | 62.725 | 60.000 | 1.02 | 1.02 | 0.00 | 4.94 |
6639 | 7402 | 3.775654 | CTCGCCCCACCTCCTCAC | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
6691 | 7454 | 2.682494 | GTCGCCCACCCTCACCTA | 60.682 | 66.667 | 0.00 | 0.00 | 0.00 | 3.08 |
6692 | 7455 | 2.064581 | GTCGCCCACCCTCACCTAT | 61.065 | 63.158 | 0.00 | 0.00 | 0.00 | 2.57 |
6693 | 7456 | 2.063979 | TCGCCCACCCTCACCTATG | 61.064 | 63.158 | 0.00 | 0.00 | 0.00 | 2.23 |
6694 | 7457 | 2.367202 | CGCCCACCCTCACCTATGT | 61.367 | 63.158 | 0.00 | 0.00 | 0.00 | 2.29 |
6695 | 7458 | 1.527370 | GCCCACCCTCACCTATGTC | 59.473 | 63.158 | 0.00 | 0.00 | 0.00 | 3.06 |
6696 | 7459 | 1.823295 | CCCACCCTCACCTATGTCG | 59.177 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
6698 | 7461 | 0.460311 | CCACCCTCACCTATGTCGTC | 59.540 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
6701 | 7464 | 2.100989 | ACCCTCACCTATGTCGTCTTC | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
6702 | 7465 | 1.065701 | CCCTCACCTATGTCGTCTTCG | 59.934 | 57.143 | 0.00 | 0.00 | 38.55 | 3.79 |
6703 | 7466 | 1.743958 | CCTCACCTATGTCGTCTTCGT | 59.256 | 52.381 | 0.00 | 0.00 | 38.33 | 3.85 |
6706 | 7469 | 2.555325 | TCACCTATGTCGTCTTCGTGTT | 59.445 | 45.455 | 0.00 | 0.00 | 38.33 | 3.32 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 1.129437 | GCGTCAAAATGCTCTGGAGAC | 59.871 | 52.381 | 1.35 | 0.00 | 34.40 | 3.36 |
1 | 2 | 1.442769 | GCGTCAAAATGCTCTGGAGA | 58.557 | 50.000 | 1.35 | 0.00 | 34.40 | 3.71 |
68 | 69 | 2.353269 | CCACTCTACTCTAGTCTGCACG | 59.647 | 54.545 | 0.00 | 0.00 | 0.00 | 5.34 |
83 | 84 | 4.697352 | CCATTCTCGTTTCATTTCCACTCT | 59.303 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
84 | 85 | 4.455877 | ACCATTCTCGTTTCATTTCCACTC | 59.544 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
85 | 86 | 4.398319 | ACCATTCTCGTTTCATTTCCACT | 58.602 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
86 | 87 | 4.455877 | AGACCATTCTCGTTTCATTTCCAC | 59.544 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
87 | 88 | 4.455533 | CAGACCATTCTCGTTTCATTTCCA | 59.544 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
88 | 89 | 4.695455 | TCAGACCATTCTCGTTTCATTTCC | 59.305 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
89 | 90 | 5.409826 | ACTCAGACCATTCTCGTTTCATTTC | 59.590 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
90 | 91 | 5.180117 | CACTCAGACCATTCTCGTTTCATTT | 59.820 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
91 | 92 | 4.692625 | CACTCAGACCATTCTCGTTTCATT | 59.307 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
92 | 93 | 4.248859 | CACTCAGACCATTCTCGTTTCAT | 58.751 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
93 | 94 | 3.653344 | CACTCAGACCATTCTCGTTTCA | 58.347 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
163 | 167 | 0.236711 | GATCCTTTCCATGCGATGCG | 59.763 | 55.000 | 0.00 | 0.00 | 0.00 | 4.73 |
316 | 323 | 2.348998 | CTGGCGGCAAGGAAGACT | 59.651 | 61.111 | 14.48 | 0.00 | 0.00 | 3.24 |
353 | 361 | 0.816825 | GAGTGGCATGGTCATCGCAT | 60.817 | 55.000 | 0.00 | 0.00 | 0.00 | 4.73 |
355 | 363 | 2.528743 | CGAGTGGCATGGTCATCGC | 61.529 | 63.158 | 0.00 | 0.00 | 0.00 | 4.58 |
369 | 377 | 2.352032 | GCACCCACTAGGAGCGAGT | 61.352 | 63.158 | 0.00 | 0.00 | 42.69 | 4.18 |
370 | 378 | 2.496817 | GCACCCACTAGGAGCGAG | 59.503 | 66.667 | 0.00 | 0.00 | 42.69 | 5.03 |
374 | 382 | 0.036952 | CACACAGCACCCACTAGGAG | 60.037 | 60.000 | 0.00 | 0.00 | 39.89 | 3.69 |
376 | 384 | 1.672356 | GCACACAGCACCCACTAGG | 60.672 | 63.158 | 0.00 | 0.00 | 44.79 | 3.02 |
377 | 385 | 2.029288 | CGCACACAGCACCCACTAG | 61.029 | 63.158 | 0.00 | 0.00 | 46.13 | 2.57 |
379 | 387 | 3.697439 | AACGCACACAGCACCCACT | 62.697 | 57.895 | 0.00 | 0.00 | 46.13 | 4.00 |
380 | 388 | 3.209097 | AACGCACACAGCACCCAC | 61.209 | 61.111 | 0.00 | 0.00 | 46.13 | 4.61 |
381 | 389 | 2.956799 | ATCAACGCACACAGCACCCA | 62.957 | 55.000 | 0.00 | 0.00 | 46.13 | 4.51 |
382 | 390 | 1.795170 | AATCAACGCACACAGCACCC | 61.795 | 55.000 | 0.00 | 0.00 | 46.13 | 4.61 |
383 | 391 | 0.030638 | AAATCAACGCACACAGCACC | 59.969 | 50.000 | 0.00 | 0.00 | 46.13 | 5.01 |
384 | 392 | 1.838913 | AAAATCAACGCACACAGCAC | 58.161 | 45.000 | 0.00 | 0.00 | 46.13 | 4.40 |
385 | 393 | 2.159324 | TGAAAAATCAACGCACACAGCA | 60.159 | 40.909 | 0.00 | 0.00 | 46.13 | 4.41 |
388 | 396 | 5.431420 | AGTATGAAAAATCAACGCACACA | 57.569 | 34.783 | 0.00 | 0.00 | 0.00 | 3.72 |
390 | 398 | 5.703592 | AGGTAGTATGAAAAATCAACGCACA | 59.296 | 36.000 | 0.00 | 0.00 | 0.00 | 4.57 |
394 | 402 | 7.545965 | AGACAGAGGTAGTATGAAAAATCAACG | 59.454 | 37.037 | 0.00 | 0.00 | 0.00 | 4.10 |
413 | 494 | 4.926238 | AGCGACAAGTAATTTCAGACAGAG | 59.074 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
416 | 497 | 4.627058 | TGAGCGACAAGTAATTTCAGACA | 58.373 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
420 | 501 | 4.319190 | CCGTTTGAGCGACAAGTAATTTCA | 60.319 | 41.667 | 0.00 | 0.00 | 39.77 | 2.69 |
421 | 502 | 4.084223 | TCCGTTTGAGCGACAAGTAATTTC | 60.084 | 41.667 | 0.00 | 0.00 | 39.77 | 2.17 |
428 | 509 | 1.148310 | ACATCCGTTTGAGCGACAAG | 58.852 | 50.000 | 0.00 | 0.00 | 39.77 | 3.16 |
440 | 521 | 9.698309 | CATGAAAATAAGTCTAGATACATCCGT | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
441 | 522 | 8.651588 | GCATGAAAATAAGTCTAGATACATCCG | 58.348 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
442 | 523 | 9.717942 | AGCATGAAAATAAGTCTAGATACATCC | 57.282 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
463 | 544 | 7.535258 | GTCGCTTAAATGGATGTATTTAGCATG | 59.465 | 37.037 | 0.00 | 0.00 | 34.87 | 4.06 |
464 | 545 | 7.228507 | TGTCGCTTAAATGGATGTATTTAGCAT | 59.771 | 33.333 | 0.00 | 0.00 | 34.87 | 3.79 |
465 | 546 | 6.540551 | TGTCGCTTAAATGGATGTATTTAGCA | 59.459 | 34.615 | 0.00 | 0.00 | 34.87 | 3.49 |
467 | 548 | 8.559536 | ACATGTCGCTTAAATGGATGTATTTAG | 58.440 | 33.333 | 0.00 | 0.00 | 34.87 | 1.85 |
469 | 550 | 7.333528 | ACATGTCGCTTAAATGGATGTATTT | 57.666 | 32.000 | 0.00 | 0.00 | 34.78 | 1.40 |
470 | 551 | 6.942532 | ACATGTCGCTTAAATGGATGTATT | 57.057 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
473 | 554 | 6.942532 | ATTACATGTCGCTTAAATGGATGT | 57.057 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
476 | 557 | 5.007234 | CGGAATTACATGTCGCTTAAATGGA | 59.993 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
478 | 559 | 5.007234 | TCCGGAATTACATGTCGCTTAAATG | 59.993 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
485 | 566 | 0.575390 | CGTCCGGAATTACATGTCGC | 59.425 | 55.000 | 5.23 | 0.00 | 0.00 | 5.19 |
487 | 568 | 2.470821 | CTCCGTCCGGAATTACATGTC | 58.529 | 52.381 | 5.23 | 0.00 | 44.66 | 3.06 |
488 | 569 | 1.138266 | CCTCCGTCCGGAATTACATGT | 59.862 | 52.381 | 5.23 | 2.69 | 44.66 | 3.21 |
494 | 575 | 0.032813 | TACTCCCTCCGTCCGGAATT | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 2.17 |
497 | 578 | 0.846015 | TATTACTCCCTCCGTCCGGA | 59.154 | 55.000 | 0.00 | 0.00 | 42.90 | 5.14 |
499 | 580 | 1.878734 | GAGTATTACTCCCTCCGTCCG | 59.121 | 57.143 | 12.06 | 0.00 | 39.28 | 4.79 |
511 | 592 | 9.863845 | GCTCTTATATTTCAGAGGGAGTATTAC | 57.136 | 37.037 | 7.86 | 0.00 | 37.59 | 1.89 |
521 | 602 | 9.522804 | AGTTCTAAACGCTCTTATATTTCAGAG | 57.477 | 33.333 | 0.00 | 0.00 | 39.78 | 3.35 |
522 | 603 | 9.871238 | AAGTTCTAAACGCTCTTATATTTCAGA | 57.129 | 29.630 | 0.00 | 0.00 | 36.23 | 3.27 |
529 | 610 | 9.918630 | ACAGTTAAAGTTCTAAACGCTCTTATA | 57.081 | 29.630 | 0.00 | 0.00 | 36.23 | 0.98 |
531 | 612 | 9.403110 | CTACAGTTAAAGTTCTAAACGCTCTTA | 57.597 | 33.333 | 0.00 | 0.00 | 36.23 | 2.10 |
534 | 615 | 6.145048 | TGCTACAGTTAAAGTTCTAAACGCTC | 59.855 | 38.462 | 0.00 | 0.00 | 36.23 | 5.03 |
535 | 616 | 5.987347 | TGCTACAGTTAAAGTTCTAAACGCT | 59.013 | 36.000 | 0.00 | 0.00 | 36.23 | 5.07 |
537 | 618 | 7.793902 | ACATGCTACAGTTAAAGTTCTAAACG | 58.206 | 34.615 | 0.00 | 0.00 | 36.23 | 3.60 |
538 | 619 | 8.770828 | TGACATGCTACAGTTAAAGTTCTAAAC | 58.229 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
539 | 620 | 8.896320 | TGACATGCTACAGTTAAAGTTCTAAA | 57.104 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
540 | 621 | 9.151471 | GATGACATGCTACAGTTAAAGTTCTAA | 57.849 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
544 | 625 | 7.755591 | CATGATGACATGCTACAGTTAAAGTT | 58.244 | 34.615 | 0.00 | 0.00 | 45.51 | 2.66 |
562 | 738 | 1.402896 | GGCGGGGTCTCTCATGATGA | 61.403 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
567 | 743 | 0.982852 | TCATTGGCGGGGTCTCTCAT | 60.983 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
579 | 757 | 1.410153 | GTTGGATGGGTGATCATTGGC | 59.590 | 52.381 | 0.00 | 0.00 | 31.91 | 4.52 |
611 | 789 | 1.214923 | TGATTATGGTGCCAGATGCCA | 59.785 | 47.619 | 0.00 | 0.00 | 40.16 | 4.92 |
668 | 848 | 1.495951 | GTTTAAGGCCGACTGCACG | 59.504 | 57.895 | 0.00 | 0.00 | 43.89 | 5.34 |
669 | 849 | 0.887387 | TGGTTTAAGGCCGACTGCAC | 60.887 | 55.000 | 0.00 | 0.00 | 43.89 | 4.57 |
670 | 850 | 0.605319 | CTGGTTTAAGGCCGACTGCA | 60.605 | 55.000 | 0.00 | 0.00 | 43.89 | 4.41 |
671 | 851 | 0.605589 | ACTGGTTTAAGGCCGACTGC | 60.606 | 55.000 | 0.00 | 0.00 | 40.16 | 4.40 |
672 | 852 | 1.156736 | CACTGGTTTAAGGCCGACTG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
673 | 853 | 1.053424 | TCACTGGTTTAAGGCCGACT | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
675 | 855 | 1.339631 | CCATCACTGGTTTAAGGCCGA | 60.340 | 52.381 | 0.00 | 0.00 | 37.79 | 5.54 |
676 | 856 | 1.094785 | CCATCACTGGTTTAAGGCCG | 58.905 | 55.000 | 0.00 | 0.00 | 37.79 | 6.13 |
677 | 857 | 0.817654 | GCCATCACTGGTTTAAGGCC | 59.182 | 55.000 | 0.00 | 0.00 | 45.10 | 5.19 |
712 | 892 | 3.933048 | CTGCAGGACAAGCCAGGGG | 62.933 | 68.421 | 5.57 | 0.00 | 40.02 | 4.79 |
743 | 930 | 4.502087 | CCATTCTACACAGCTAGCTATGCA | 60.502 | 45.833 | 22.79 | 9.49 | 0.00 | 3.96 |
747 | 934 | 3.637229 | GACCCATTCTACACAGCTAGCTA | 59.363 | 47.826 | 18.86 | 0.00 | 0.00 | 3.32 |
799 | 992 | 0.535797 | CTACTTTGGGGACTCCGACC | 59.464 | 60.000 | 0.00 | 0.00 | 38.76 | 4.79 |
847 | 1040 | 2.215196 | AGTCGCGCTGGAGTTTTAAAA | 58.785 | 42.857 | 5.56 | 0.00 | 0.00 | 1.52 |
878 | 1071 | 1.003118 | TGTGTCAATGTGGGGACTAGC | 59.997 | 52.381 | 0.00 | 0.00 | 35.11 | 3.42 |
1452 | 1723 | 2.921538 | GATGCACTCGTCGACGGAGG | 62.922 | 65.000 | 35.05 | 25.88 | 40.29 | 4.30 |
1508 | 1779 | 2.091541 | GGGTGTGAGAGAGACTGAGAG | 58.908 | 57.143 | 0.00 | 0.00 | 0.00 | 3.20 |
1509 | 1780 | 1.272203 | GGGGTGTGAGAGAGACTGAGA | 60.272 | 57.143 | 0.00 | 0.00 | 0.00 | 3.27 |
1510 | 1781 | 1.181786 | GGGGTGTGAGAGAGACTGAG | 58.818 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
1511 | 1782 | 0.609406 | CGGGGTGTGAGAGAGACTGA | 60.609 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1512 | 1783 | 1.886585 | CGGGGTGTGAGAGAGACTG | 59.113 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
1513 | 1784 | 1.979693 | GCGGGGTGTGAGAGAGACT | 60.980 | 63.158 | 0.00 | 0.00 | 0.00 | 3.24 |
1516 | 1787 | 4.135153 | CGGCGGGGTGTGAGAGAG | 62.135 | 72.222 | 0.00 | 0.00 | 0.00 | 3.20 |
1532 | 1803 | 6.793349 | ACTAGCCAGTAGTATTACTTGAACG | 58.207 | 40.000 | 0.85 | 0.00 | 40.47 | 3.95 |
1550 | 1821 | 2.435069 | GGAAGGGGAGAAACTACTAGCC | 59.565 | 54.545 | 0.00 | 0.00 | 0.00 | 3.93 |
1551 | 1822 | 3.376636 | AGGAAGGGGAGAAACTACTAGC | 58.623 | 50.000 | 0.00 | 0.00 | 0.00 | 3.42 |
1600 | 1919 | 7.811713 | GGCAATTATTAGCTCAAATCAAGGATC | 59.188 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
1628 | 1947 | 2.606961 | CGCAACTCCGCAAAGCTGA | 61.607 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
1630 | 1949 | 2.591715 | ACGCAACTCCGCAAAGCT | 60.592 | 55.556 | 0.00 | 0.00 | 0.00 | 3.74 |
1653 | 1972 | 2.555199 | AGAGTTTGCTCACACACTGTC | 58.445 | 47.619 | 0.00 | 0.00 | 44.00 | 3.51 |
1668 | 1988 | 5.694995 | TCTTCCAATTGTCCTTCAAGAGTT | 58.305 | 37.500 | 4.43 | 0.00 | 39.55 | 3.01 |
1684 | 2004 | 3.281727 | AAACAGACACTGCTCTTCCAA | 57.718 | 42.857 | 0.00 | 0.00 | 34.37 | 3.53 |
1685 | 2005 | 2.945008 | CAAAACAGACACTGCTCTTCCA | 59.055 | 45.455 | 0.00 | 0.00 | 34.37 | 3.53 |
1697 | 2017 | 2.618709 | AGCAGGCAGTAACAAAACAGAC | 59.381 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1699 | 2022 | 2.618241 | TGAGCAGGCAGTAACAAAACAG | 59.382 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1713 | 2036 | 5.826737 | ACATCTCCTTGAAAATATGAGCAGG | 59.173 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1745 | 2068 | 5.880054 | AAGAACAATTCACCTAATCCACG | 57.120 | 39.130 | 0.00 | 0.00 | 0.00 | 4.94 |
1819 | 2154 | 0.995024 | CAAGAGGTTGATCCCCAGGT | 59.005 | 55.000 | 1.75 | 0.00 | 35.46 | 4.00 |
1851 | 2186 | 3.225104 | ACATGATTTCCACACAGCAACT | 58.775 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
1852 | 2187 | 3.648339 | ACATGATTTCCACACAGCAAC | 57.352 | 42.857 | 0.00 | 0.00 | 0.00 | 4.17 |
1855 | 2190 | 3.981211 | ACAAACATGATTTCCACACAGC | 58.019 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
1857 | 2192 | 4.569966 | GCAAACAAACATGATTTCCACACA | 59.430 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
1867 | 2202 | 7.140705 | CAGATTCAAGTAGCAAACAAACATGA | 58.859 | 34.615 | 0.00 | 0.00 | 0.00 | 3.07 |
1868 | 2203 | 6.364165 | CCAGATTCAAGTAGCAAACAAACATG | 59.636 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
1875 | 2210 | 5.644644 | CAATCCCAGATTCAAGTAGCAAAC | 58.355 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
2055 | 2614 | 6.746104 | TTGCAAAATAAAAGTGACATGTCG | 57.254 | 33.333 | 20.54 | 3.25 | 0.00 | 4.35 |
2081 | 2640 | 6.090783 | GGGTTAAACTTTGACCATCGATTTC | 58.909 | 40.000 | 15.41 | 0.00 | 35.11 | 2.17 |
2161 | 2720 | 2.865551 | GTTGCAAAATGTTGGTCACTGG | 59.134 | 45.455 | 0.00 | 0.00 | 35.10 | 4.00 |
2183 | 2742 | 5.708697 | TGTTTTGACGATACCTCAGACTAGA | 59.291 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2184 | 2743 | 5.950883 | TGTTTTGACGATACCTCAGACTAG | 58.049 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2185 | 2744 | 5.708697 | TCTGTTTTGACGATACCTCAGACTA | 59.291 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2186 | 2745 | 4.523173 | TCTGTTTTGACGATACCTCAGACT | 59.477 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
2187 | 2746 | 4.806330 | TCTGTTTTGACGATACCTCAGAC | 58.194 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
2259 | 2820 | 5.647658 | AGAGTTGCATCATTTGGTATTTCGA | 59.352 | 36.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2260 | 2821 | 5.883661 | AGAGTTGCATCATTTGGTATTTCG | 58.116 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
2357 | 2919 | 6.150307 | AGTTCAGACAGACTCACTATACACTG | 59.850 | 42.308 | 0.00 | 0.00 | 0.00 | 3.66 |
2406 | 2968 | 3.914312 | ACCTAGGCGTATTGATTCATCG | 58.086 | 45.455 | 9.30 | 0.00 | 0.00 | 3.84 |
2532 | 3094 | 9.457436 | AAAGTGAAGTTTGAAAGTTCTAGGTTA | 57.543 | 29.630 | 21.92 | 2.74 | 40.65 | 2.85 |
2677 | 3245 | 2.921754 | GAGAGTACATTCGGTGGTTTCG | 59.078 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2686 | 3254 | 2.534298 | CACAGCCTGAGAGTACATTCG | 58.466 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
2758 | 3327 | 2.549282 | CGTTTTGTGGCGACCGAG | 59.451 | 61.111 | 0.00 | 0.00 | 0.00 | 4.63 |
2827 | 3396 | 7.072328 | TGGAAGATACAATGGAGATACAATGGA | 59.928 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
2828 | 3397 | 7.173907 | GTGGAAGATACAATGGAGATACAATGG | 59.826 | 40.741 | 0.00 | 0.00 | 0.00 | 3.16 |
2829 | 3398 | 7.716560 | TGTGGAAGATACAATGGAGATACAATG | 59.283 | 37.037 | 0.00 | 0.00 | 0.00 | 2.82 |
2830 | 3399 | 7.716998 | GTGTGGAAGATACAATGGAGATACAAT | 59.283 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
2831 | 3400 | 7.047891 | GTGTGGAAGATACAATGGAGATACAA | 58.952 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
2832 | 3401 | 6.384015 | AGTGTGGAAGATACAATGGAGATACA | 59.616 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2833 | 3402 | 6.821388 | AGTGTGGAAGATACAATGGAGATAC | 58.179 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2834 | 3403 | 8.727100 | ATAGTGTGGAAGATACAATGGAGATA | 57.273 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
2835 | 3404 | 5.965033 | AGTGTGGAAGATACAATGGAGAT | 57.035 | 39.130 | 0.00 | 0.00 | 0.00 | 2.75 |
2836 | 3405 | 6.611236 | TGATAGTGTGGAAGATACAATGGAGA | 59.389 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
2837 | 3406 | 6.820335 | TGATAGTGTGGAAGATACAATGGAG | 58.180 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2861 | 3430 | 8.023128 | CCAAAACGAACTCATACATCAAAGAAT | 58.977 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2868 | 3437 | 6.761714 | ACTATCCCAAAACGAACTCATACATC | 59.238 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
3036 | 3605 | 1.228245 | ACAACGGGATGCAAGCACT | 60.228 | 52.632 | 0.00 | 0.00 | 0.00 | 4.40 |
3105 | 3674 | 5.430886 | CACATAAGGAAGACATCACCATGA | 58.569 | 41.667 | 0.00 | 0.00 | 33.72 | 3.07 |
3171 | 3740 | 1.727880 | GTGCTACCGAAAACGCATACA | 59.272 | 47.619 | 0.00 | 0.00 | 34.60 | 2.29 |
3186 | 3755 | 6.649155 | ACATTGACATATACAACCAGTGCTA | 58.351 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
3187 | 3756 | 5.500234 | ACATTGACATATACAACCAGTGCT | 58.500 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
3235 | 3806 | 6.099125 | TCAGTGTATATTAACAGGGCTAAGCA | 59.901 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
3497 | 4070 | 2.008242 | AGCCCTTATGTGCCACAAAA | 57.992 | 45.000 | 0.00 | 0.00 | 0.00 | 2.44 |
3504 | 4077 | 5.182380 | TGTTAACAAAGTAGCCCTTATGTGC | 59.818 | 40.000 | 5.64 | 0.00 | 31.48 | 4.57 |
3543 | 4116 | 6.312399 | TGACACAACTGTTATGGATCAAAC | 57.688 | 37.500 | 3.63 | 0.00 | 0.00 | 2.93 |
3615 | 4188 | 7.570132 | TGCCTTCTAGGTTTACATGCTATTTA | 58.430 | 34.615 | 0.00 | 0.00 | 37.80 | 1.40 |
3714 | 4287 | 5.905480 | CAACCTTTGCCTAACATCAAAAC | 57.095 | 39.130 | 0.00 | 0.00 | 32.55 | 2.43 |
3735 | 4308 | 3.495331 | ACCCTATTGTTGTTGACATGCA | 58.505 | 40.909 | 0.00 | 0.00 | 38.26 | 3.96 |
3736 | 4309 | 3.505680 | TGACCCTATTGTTGTTGACATGC | 59.494 | 43.478 | 0.00 | 0.00 | 38.26 | 4.06 |
3742 | 4315 | 7.432869 | TCTCAAAAATGACCCTATTGTTGTTG | 58.567 | 34.615 | 0.00 | 0.00 | 36.86 | 3.33 |
3743 | 4316 | 7.595819 | TCTCAAAAATGACCCTATTGTTGTT | 57.404 | 32.000 | 0.00 | 0.00 | 36.86 | 2.83 |
3744 | 4317 | 7.595819 | TTCTCAAAAATGACCCTATTGTTGT | 57.404 | 32.000 | 0.00 | 0.00 | 36.86 | 3.32 |
3857 | 4430 | 9.784531 | ATCACATTCTTACACTTATATTCCAGG | 57.215 | 33.333 | 0.00 | 0.00 | 0.00 | 4.45 |
4159 | 4732 | 2.339769 | ACTACTTCCTTCAGGCCTTGT | 58.660 | 47.619 | 0.00 | 0.00 | 34.44 | 3.16 |
4166 | 4739 | 5.696724 | CAGTGTGGTTAACTACTTCCTTCAG | 59.303 | 44.000 | 20.97 | 2.45 | 0.00 | 3.02 |
4314 | 4982 | 7.821846 | ACACAACATGTTACAAACAAAGGAATT | 59.178 | 29.630 | 11.53 | 0.00 | 45.86 | 2.17 |
4315 | 4983 | 7.327214 | ACACAACATGTTACAAACAAAGGAAT | 58.673 | 30.769 | 11.53 | 0.00 | 45.86 | 3.01 |
4436 | 5105 | 9.549078 | GGAATAAAAACAACAAATGGTAGGAAA | 57.451 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
4669 | 5338 | 5.246307 | AGCAACCTAAGATGTCAGTTTACC | 58.754 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
4682 | 5351 | 7.615582 | TCTTCACAAATATGAGCAACCTAAG | 57.384 | 36.000 | 0.00 | 0.00 | 0.00 | 2.18 |
4736 | 5405 | 2.380064 | CCCAATTAATGCAGGGCCTA | 57.620 | 50.000 | 5.28 | 0.00 | 33.91 | 3.93 |
4835 | 5505 | 2.094762 | AACATACCACGAAGAGCACC | 57.905 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5007 | 5677 | 2.345760 | GGCCTGCATGTTGTGAGGG | 61.346 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
5068 | 5738 | 2.777832 | ACATTGAGAGGAACAGGCTC | 57.222 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5107 | 5777 | 7.959175 | AGTTAGGGGTTGAAATAAAAAGAACC | 58.041 | 34.615 | 0.00 | 0.00 | 36.18 | 3.62 |
5176 | 5846 | 3.638160 | AGAAACACCATGAATTGCTGTGT | 59.362 | 39.130 | 0.00 | 0.00 | 41.61 | 3.72 |
5208 | 5878 | 1.941999 | GAAGCATGTCCAAGCCCTGC | 61.942 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
5291 | 5961 | 2.084546 | GGTCCATGAGGTAAACTGTGC | 58.915 | 52.381 | 0.00 | 0.00 | 35.89 | 4.57 |
5325 | 6000 | 6.074544 | AGTTAGTATCGCAGAGATGGTTAC | 57.925 | 41.667 | 0.00 | 0.00 | 43.63 | 2.50 |
5548 | 6280 | 1.452953 | CCTGGGCATAGCAGTGCATG | 61.453 | 60.000 | 19.20 | 18.36 | 46.81 | 4.06 |
5644 | 6379 | 5.065218 | GGATGTACTAGAATGGTGTTTGCTG | 59.935 | 44.000 | 0.00 | 0.00 | 0.00 | 4.41 |
5769 | 6504 | 4.677584 | ACTCTTGCACTAAGATCGATCAC | 58.322 | 43.478 | 26.47 | 9.37 | 44.12 | 3.06 |
5770 | 6505 | 4.991153 | ACTCTTGCACTAAGATCGATCA | 57.009 | 40.909 | 26.47 | 6.72 | 44.12 | 2.92 |
5771 | 6506 | 6.307031 | TCTACTCTTGCACTAAGATCGATC | 57.693 | 41.667 | 17.91 | 17.91 | 44.12 | 3.69 |
5772 | 6507 | 6.892658 | ATCTACTCTTGCACTAAGATCGAT | 57.107 | 37.500 | 0.00 | 0.00 | 44.12 | 3.59 |
5827 | 6562 | 2.277858 | CCTCCTGTACAAGGCTCGT | 58.722 | 57.895 | 0.61 | 0.00 | 46.92 | 4.18 |
6100 | 6846 | 1.333619 | CTTGGGGAGTGTGAAAACACG | 59.666 | 52.381 | 3.52 | 0.00 | 44.71 | 4.49 |
6152 | 6899 | 0.820871 | GTCACCACCCAGCACAAAAA | 59.179 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
6251 | 7003 | 0.828022 | TGGCGAGGGACGTTCATAAT | 59.172 | 50.000 | 0.00 | 0.00 | 44.60 | 1.28 |
6278 | 7033 | 2.159366 | ACCGAACTTCTGACGCTCATAG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.23 |
6294 | 7049 | 1.610038 | TGTTGAAGCTACGAGACCGAA | 59.390 | 47.619 | 0.00 | 0.00 | 39.50 | 4.30 |
6295 | 7050 | 1.241165 | TGTTGAAGCTACGAGACCGA | 58.759 | 50.000 | 0.00 | 0.00 | 39.50 | 4.69 |
6296 | 7051 | 1.719780 | GTTGTTGAAGCTACGAGACCG | 59.280 | 52.381 | 0.00 | 0.00 | 42.50 | 4.79 |
6297 | 7052 | 2.067013 | GGTTGTTGAAGCTACGAGACC | 58.933 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
6298 | 7053 | 2.067013 | GGGTTGTTGAAGCTACGAGAC | 58.933 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
6413 | 7176 | 2.469465 | ATTGGTGTGCCGAGGGTGAG | 62.469 | 60.000 | 0.00 | 0.00 | 37.67 | 3.51 |
6479 | 7242 | 3.299977 | GGGTTTGACCGGCCCAAC | 61.300 | 66.667 | 0.00 | 0.00 | 39.83 | 3.77 |
6480 | 7243 | 4.607025 | GGGGTTTGACCGGCCCAA | 62.607 | 66.667 | 15.17 | 10.64 | 44.07 | 4.12 |
6488 | 7251 | 1.966451 | CTGACGGCTGGGGTTTGAC | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
6489 | 7252 | 1.488705 | ATCTGACGGCTGGGGTTTGA | 61.489 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
6490 | 7253 | 1.002134 | ATCTGACGGCTGGGGTTTG | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 2.93 |
6491 | 7254 | 1.201429 | AGATCTGACGGCTGGGGTTT | 61.201 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
6493 | 7256 | 2.039624 | AGATCTGACGGCTGGGGT | 59.960 | 61.111 | 0.00 | 0.00 | 0.00 | 4.95 |
6494 | 7257 | 2.503061 | CAGATCTGACGGCTGGGG | 59.497 | 66.667 | 18.34 | 0.00 | 0.00 | 4.96 |
6495 | 7258 | 2.503061 | CCAGATCTGACGGCTGGG | 59.497 | 66.667 | 24.62 | 0.21 | 44.24 | 4.45 |
6497 | 7260 | 0.460987 | GGAACCAGATCTGACGGCTG | 60.461 | 60.000 | 24.62 | 8.51 | 0.00 | 4.85 |
6498 | 7261 | 1.901085 | GGAACCAGATCTGACGGCT | 59.099 | 57.895 | 24.62 | 0.00 | 0.00 | 5.52 |
6499 | 7262 | 4.522971 | GGAACCAGATCTGACGGC | 57.477 | 61.111 | 24.62 | 9.86 | 0.00 | 5.68 |
6512 | 7275 | 0.741221 | GATCTGACGGTGCAGGGAAC | 60.741 | 60.000 | 0.00 | 0.00 | 36.55 | 3.62 |
6513 | 7276 | 1.596934 | GATCTGACGGTGCAGGGAA | 59.403 | 57.895 | 0.00 | 0.00 | 36.55 | 3.97 |
6515 | 7278 | 2.187946 | GGATCTGACGGTGCAGGG | 59.812 | 66.667 | 0.00 | 0.00 | 36.55 | 4.45 |
6517 | 7280 | 0.460987 | GAAGGGATCTGACGGTGCAG | 60.461 | 60.000 | 0.00 | 0.00 | 37.24 | 4.41 |
6518 | 7281 | 1.596934 | GAAGGGATCTGACGGTGCA | 59.403 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
6519 | 7282 | 1.153349 | GGAAGGGATCTGACGGTGC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
6520 | 7283 | 1.522569 | GGGAAGGGATCTGACGGTG | 59.477 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
6521 | 7284 | 1.689582 | GGGGAAGGGATCTGACGGT | 60.690 | 63.158 | 0.00 | 0.00 | 0.00 | 4.83 |
6522 | 7285 | 2.444256 | GGGGGAAGGGATCTGACGG | 61.444 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
6537 | 7300 | 0.547712 | TGAAGAAGGAGGTGAGGGGG | 60.548 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
6538 | 7301 | 1.003696 | GTTGAAGAAGGAGGTGAGGGG | 59.996 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
6540 | 7303 | 1.981495 | AGGTTGAAGAAGGAGGTGAGG | 59.019 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
6541 | 7304 | 2.027653 | GGAGGTTGAAGAAGGAGGTGAG | 60.028 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
6542 | 7305 | 1.978580 | GGAGGTTGAAGAAGGAGGTGA | 59.021 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
6543 | 7306 | 1.003696 | GGGAGGTTGAAGAAGGAGGTG | 59.996 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
6545 | 7308 | 0.250513 | CGGGAGGTTGAAGAAGGAGG | 59.749 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6546 | 7309 | 0.391793 | GCGGGAGGTTGAAGAAGGAG | 60.392 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
6548 | 7311 | 0.955919 | GTGCGGGAGGTTGAAGAAGG | 60.956 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
6549 | 7312 | 1.291877 | CGTGCGGGAGGTTGAAGAAG | 61.292 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
6551 | 7314 | 2.342279 | CGTGCGGGAGGTTGAAGA | 59.658 | 61.111 | 0.00 | 0.00 | 0.00 | 2.87 |
6552 | 7315 | 2.742372 | CCGTGCGGGAGGTTGAAG | 60.742 | 66.667 | 2.15 | 0.00 | 38.47 | 3.02 |
6622 | 7385 | 3.775654 | GTGAGGAGGTGGGGCGAG | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
6675 | 7438 | 2.063979 | CATAGGTGAGGGTGGGCGA | 61.064 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
6676 | 7439 | 2.311688 | GACATAGGTGAGGGTGGGCG | 62.312 | 65.000 | 0.00 | 0.00 | 0.00 | 6.13 |
6677 | 7440 | 1.527370 | GACATAGGTGAGGGTGGGC | 59.473 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
6678 | 7441 | 0.976073 | ACGACATAGGTGAGGGTGGG | 60.976 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6682 | 7445 | 1.065701 | CGAAGACGACATAGGTGAGGG | 59.934 | 57.143 | 0.00 | 0.00 | 42.66 | 4.30 |
6683 | 7446 | 1.743958 | ACGAAGACGACATAGGTGAGG | 59.256 | 52.381 | 0.00 | 0.00 | 42.66 | 3.86 |
6684 | 7447 | 2.161808 | ACACGAAGACGACATAGGTGAG | 59.838 | 50.000 | 0.00 | 0.00 | 42.66 | 3.51 |
6685 | 7448 | 2.156917 | ACACGAAGACGACATAGGTGA | 58.843 | 47.619 | 0.00 | 0.00 | 42.66 | 4.02 |
6686 | 7449 | 2.631418 | ACACGAAGACGACATAGGTG | 57.369 | 50.000 | 0.00 | 0.00 | 42.66 | 4.00 |
6687 | 7450 | 2.942710 | CAACACGAAGACGACATAGGT | 58.057 | 47.619 | 0.00 | 0.00 | 42.66 | 3.08 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.