Multiple sequence alignment - TraesCS4D01G301600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G301600 chr4D 100.000 9925 0 0 1 9925 469602256 469612180 0.000000e+00 18329.0
1 TraesCS4D01G301600 chr4D 94.931 434 20 2 1 432 121480667 121480234 0.000000e+00 678.0
2 TraesCS4D01G301600 chr4D 93.085 188 9 3 2268 2453 482703438 482703623 1.270000e-68 272.0
3 TraesCS4D01G301600 chr4D 96.000 50 2 0 3420 3469 332439129 332439178 2.300000e-11 82.4
4 TraesCS4D01G301600 chr4D 94.118 51 3 0 3413 3463 69119826 69119776 2.970000e-10 78.7
5 TraesCS4D01G301600 chr4D 95.918 49 0 2 3422 3470 403409571 403409525 2.970000e-10 78.7
6 TraesCS4D01G301600 chr4A 93.373 4210 158 56 5546 9701 1882941 1878799 0.000000e+00 6117.0
7 TraesCS4D01G301600 chr4A 94.998 2139 67 20 3461 5564 1885143 1883010 0.000000e+00 3321.0
8 TraesCS4D01G301600 chr4A 94.268 942 44 6 2451 3385 1886114 1885176 0.000000e+00 1432.0
9 TraesCS4D01G301600 chr4A 89.566 738 40 8 1570 2275 1886830 1886098 0.000000e+00 902.0
10 TraesCS4D01G301600 chr4A 91.463 492 33 6 7354 7841 609469031 609469517 0.000000e+00 667.0
11 TraesCS4D01G301600 chr4A 94.477 344 18 1 857 1200 1887451 1887109 6.830000e-146 529.0
12 TraesCS4D01G301600 chr4A 94.413 179 10 0 1348 1526 1887014 1886836 9.820000e-70 276.0
13 TraesCS4D01G301600 chr4A 79.221 154 22 7 434 580 596470593 596470443 2.280000e-16 99.0
14 TraesCS4D01G301600 chr4A 100.000 29 0 0 819 847 1887476 1887448 5.000000e-03 54.7
15 TraesCS4D01G301600 chr4B 93.568 3747 141 21 5283 8993 590855485 590859167 0.000000e+00 5493.0
16 TraesCS4D01G301600 chr4B 96.220 1455 34 13 2451 3888 590851883 590853333 0.000000e+00 2362.0
17 TraesCS4D01G301600 chr4B 95.730 1405 30 14 3889 5290 590853375 590854752 0.000000e+00 2235.0
18 TraesCS4D01G301600 chr4B 90.909 803 53 20 9035 9830 590859167 590859956 0.000000e+00 1061.0
19 TraesCS4D01G301600 chr4B 91.978 723 35 8 626 1339 590850349 590851057 0.000000e+00 992.0
20 TraesCS4D01G301600 chr4B 84.536 873 51 37 1434 2272 590851074 590851896 0.000000e+00 787.0
21 TraesCS4D01G301600 chr4B 93.590 156 9 1 7449 7603 77079948 77079793 2.160000e-56 231.0
22 TraesCS4D01G301600 chr4B 85.437 206 19 6 445 648 590850142 590850338 4.700000e-48 204.0
23 TraesCS4D01G301600 chr4B 85.333 150 21 1 2899 3048 483096321 483096173 4.800000e-33 154.0
24 TraesCS4D01G301600 chr3D 95.853 434 16 2 1 432 47339318 47338885 0.000000e+00 701.0
25 TraesCS4D01G301600 chr3D 94.240 434 22 3 1 432 335200275 335200707 0.000000e+00 660.0
26 TraesCS4D01G301600 chr3D 94.382 178 8 1 2276 2453 422517617 422517792 1.270000e-68 272.0
27 TraesCS4D01G301600 chr3D 93.889 180 9 1 2276 2455 376923814 376923637 4.570000e-68 270.0
28 TraesCS4D01G301600 chr3D 97.872 47 1 0 3419 3465 30294894 30294940 2.300000e-11 82.4
29 TraesCS4D01G301600 chr3D 96.078 51 0 2 3422 3471 42630722 42630673 2.300000e-11 82.4
30 TraesCS4D01G301600 chr3D 94.340 53 1 2 3420 3472 84113371 84113421 8.260000e-11 80.5
31 TraesCS4D01G301600 chr1A 92.276 492 29 6 7354 7841 563747748 563747262 0.000000e+00 689.0
32 TraesCS4D01G301600 chr1A 91.667 492 32 6 7354 7841 115964621 115964135 0.000000e+00 673.0
33 TraesCS4D01G301600 chr1A 93.779 434 25 2 1 432 585985833 585985400 0.000000e+00 651.0
34 TraesCS4D01G301600 chr1A 97.959 49 1 0 3421 3469 500986366 500986318 1.780000e-12 86.1
35 TraesCS4D01G301600 chr6D 95.392 434 17 3 1 432 73795685 73795253 0.000000e+00 688.0
36 TraesCS4D01G301600 chr6D 93.820 178 9 1 2276 2453 319689592 319689417 5.910000e-67 267.0
37 TraesCS4D01G301600 chr6D 97.826 46 1 0 3421 3466 146072864 146072819 8.260000e-11 80.5
38 TraesCS4D01G301600 chr6D 100.000 42 0 0 3423 3464 7460234 7460275 2.970000e-10 78.7
39 TraesCS4D01G301600 chr6D 97.778 45 1 0 3421 3465 13600182 13600226 2.970000e-10 78.7
40 TraesCS4D01G301600 chr6D 100.000 42 0 0 3421 3462 91845207 91845166 2.970000e-10 78.7
41 TraesCS4D01G301600 chr6D 97.826 46 0 1 3421 3465 122744387 122744342 2.970000e-10 78.7
42 TraesCS4D01G301600 chr6D 97.778 45 1 0 3421 3465 168293796 168293752 2.970000e-10 78.7
43 TraesCS4D01G301600 chr6D 97.778 45 1 0 3422 3466 236052651 236052607 2.970000e-10 78.7
44 TraesCS4D01G301600 chr6D 95.918 49 1 1 3420 3467 420744280 420744232 2.970000e-10 78.7
45 TraesCS4D01G301600 chr6D 90.000 60 4 2 3422 3481 78083123 78083180 1.070000e-09 76.8
46 TraesCS4D01G301600 chr2D 94.700 434 20 3 1 432 318417411 318417843 0.000000e+00 671.0
47 TraesCS4D01G301600 chr2D 94.915 177 7 1 2276 2452 459298876 459298702 9.820000e-70 276.0
48 TraesCS4D01G301600 chr2D 88.060 67 3 4 3418 3484 627976150 627976211 3.840000e-09 75.0
49 TraesCS4D01G301600 chr5D 94.457 433 23 1 1 432 256270574 256271006 0.000000e+00 665.0
50 TraesCS4D01G301600 chr5D 94.240 434 23 2 1 432 445036721 445036288 0.000000e+00 662.0
51 TraesCS4D01G301600 chr5D 97.872 47 1 0 3418 3464 322388532 322388486 2.300000e-11 82.4
52 TraesCS4D01G301600 chr7A 91.057 492 34 6 7354 7841 40323087 40322602 0.000000e+00 656.0
53 TraesCS4D01G301600 chr7A 94.886 176 7 1 2278 2453 83785009 83784836 3.530000e-69 274.0
54 TraesCS4D01G301600 chr7A 92.727 55 4 0 3421 3475 211639928 211639874 8.260000e-11 80.5
55 TraesCS4D01G301600 chr5A 94.023 435 23 3 1 432 103567216 103566782 0.000000e+00 656.0
56 TraesCS4D01G301600 chr5B 89.384 292 28 3 7553 7841 50301302 50301593 2.040000e-96 364.0
57 TraesCS4D01G301600 chr5B 94.565 184 7 2 2271 2453 574956628 574956447 2.110000e-71 281.0
58 TraesCS4D01G301600 chr5B 87.786 131 10 3 7354 7483 50301168 50301293 2.230000e-31 148.0
59 TraesCS4D01G301600 chr5B 91.525 59 3 2 3407 3465 562983209 562983153 8.260000e-11 80.5
60 TraesCS4D01G301600 chr7B 90.335 269 23 3 7576 7841 88139320 88139052 5.700000e-92 350.0
61 TraesCS4D01G301600 chr7B 88.550 131 9 3 7354 7483 88140722 88140597 4.800000e-33 154.0
62 TraesCS4D01G301600 chr7B 97.959 49 1 0 3421 3469 517395826 517395874 1.780000e-12 86.1
63 TraesCS4D01G301600 chr1D 94.944 178 7 1 2276 2453 86918509 86918684 2.730000e-70 278.0
64 TraesCS4D01G301600 chr1D 100.000 44 0 0 3421 3464 12225424 12225381 2.300000e-11 82.4
65 TraesCS4D01G301600 chr1D 97.872 47 1 0 3421 3467 355171616 355171570 2.300000e-11 82.4
66 TraesCS4D01G301600 chr1D 95.918 49 2 0 3418 3466 220878711 220878759 8.260000e-11 80.5
67 TraesCS4D01G301600 chr1D 95.556 45 2 0 3421 3465 467810134 467810178 1.380000e-08 73.1
68 TraesCS4D01G301600 chr1B 90.196 204 16 3 2249 2451 70318365 70318565 7.640000e-66 263.0
69 TraesCS4D01G301600 chr3A 78.899 218 27 15 442 644 60506221 60506434 8.090000e-26 130.0
70 TraesCS4D01G301600 chr2A 91.803 61 4 1 3408 3468 764010737 764010678 6.390000e-12 84.2
71 TraesCS4D01G301600 chr7D 92.727 55 4 0 3422 3476 184573399 184573345 8.260000e-11 80.5
72 TraesCS4D01G301600 chr7D 95.918 49 2 0 3422 3470 494673635 494673587 8.260000e-11 80.5
73 TraesCS4D01G301600 chr3B 91.379 58 5 0 3412 3469 392299375 392299432 8.260000e-11 80.5
74 TraesCS4D01G301600 chr6A 92.727 55 3 1 3411 3464 39190784 39190730 2.970000e-10 78.7
75 TraesCS4D01G301600 chr6A 88.889 63 4 3 3425 3485 592880444 592880383 3.840000e-09 75.0
76 TraesCS4D01G301600 chrUn 97.727 44 1 0 3421 3464 197752438 197752481 1.070000e-09 76.8
77 TraesCS4D01G301600 chrUn 93.878 49 3 0 3422 3470 104668848 104668800 3.840000e-09 75.0
78 TraesCS4D01G301600 chrUn 97.619 42 1 0 3422 3463 68883312 68883353 1.380000e-08 73.1
79 TraesCS4D01G301600 chrUn 95.556 45 2 0 3422 3466 100223779 100223735 1.380000e-08 73.1
80 TraesCS4D01G301600 chrUn 93.878 49 2 1 3422 3469 376297100 376297148 1.380000e-08 73.1
81 TraesCS4D01G301600 chrUn 97.619 42 0 1 3421 3462 37862209 37862169 4.970000e-08 71.3
82 TraesCS4D01G301600 chrUn 97.561 41 1 0 3424 3464 65136730 65136690 4.970000e-08 71.3
83 TraesCS4D01G301600 chrUn 93.333 45 3 0 3421 3465 104668851 104668895 6.430000e-07 67.6
84 TraesCS4D01G301600 chrUn 95.238 42 2 0 3423 3464 110687445 110687486 6.430000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G301600 chr4D 469602256 469612180 9924 False 18329.000000 18329 100.000000 1 9925 1 chr4D.!!$F2 9924
1 TraesCS4D01G301600 chr4A 1878799 1887476 8677 True 1804.528571 6117 94.442143 819 9701 7 chr4A.!!$R2 8882
2 TraesCS4D01G301600 chr4B 590850142 590859956 9814 False 1876.285714 5493 91.196857 445 9830 7 chr4B.!!$F1 9385
3 TraesCS4D01G301600 chr7B 88139052 88140722 1670 True 252.000000 350 89.442500 7354 7841 2 chr7B.!!$R1 487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.037326 CTTGCTGACGCCTACCTTCA 60.037 55.0 0.00 0.00 34.43 3.02 F
440 441 0.107214 CCGCCCCATTGCTCTAAAGA 60.107 55.0 0.00 0.00 0.00 2.52 F
2317 2417 0.107831 AAGCTGTTGCCTTACGACCA 59.892 50.0 0.00 0.00 40.80 4.02 F
2373 2473 0.108472 GCAGAAATGCAGGGAAAGGC 60.108 55.0 0.00 0.00 34.41 4.35 F
2376 2476 0.108472 GAAATGCAGGGAAAGGCTGC 60.108 55.0 0.00 0.00 43.67 5.25 F
2390 2490 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.0 0.00 0.00 0.00 4.51 F
2407 2507 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.0 23.81 13.97 37.50 3.46 F
4253 4420 0.252057 TGATCCTCCCAGACAACCGA 60.252 55.0 0.00 0.00 0.00 4.69 F
5792 6798 2.640826 TGGTCTAACCCTGGTACTTTGG 59.359 50.0 0.00 0.00 37.50 3.28 F
6197 7216 0.980423 AGGAAGACTGAAGGAGGCAC 59.020 55.0 0.00 0.00 27.95 5.01 F
7825 10116 0.474184 CCAGACCCACTTGTGAAGGT 59.526 55.0 1.89 2.05 34.57 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 1306 0.825010 AACAGGAAACAGCAGCCCAG 60.825 55.000 0.00 0.00 0.00 4.45 R
2330 2430 0.034896 GGCTGTTTCCAGGACTCGAA 59.965 55.000 0.00 0.00 39.22 3.71 R
3610 3733 4.081309 GCACTCCACACTACATTAGGGTTA 60.081 45.833 0.00 0.00 40.09 2.85 R
3772 3895 4.654915 TCAAGTGGAATCAGATGCTCAAA 58.345 39.130 0.00 0.00 0.00 2.69 R
4190 4357 6.142139 CAGATCGTAGATCTAGCTGTCAAAG 58.858 44.000 11.66 0.00 45.12 2.77 R
4253 4420 8.818057 GCTAATATCACAAGACTTAAACGACAT 58.182 33.333 0.00 0.00 0.00 3.06 R
4593 4760 3.501062 CCATATGATACCAGCAAGCAGTG 59.499 47.826 3.65 0.00 0.00 3.66 R
5811 6817 0.954452 AAAGGCAAAGCAACTCGAGG 59.046 50.000 18.41 0.17 0.00 4.63 R
7168 8207 0.527565 GGCTACATTGCACAACAGGG 59.472 55.000 0.00 0.00 34.04 4.45 R
7845 10136 2.350007 GCTCGGTCTCAGTCATCGTATC 60.350 54.545 0.00 0.00 0.00 2.24 R
9801 12129 0.029300 CTGGCATTATCCAAACGCCG 59.971 55.000 0.00 0.00 46.02 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.553467 AGAAACGTCGGGTTGGGA 58.447 55.556 0.00 0.00 39.30 4.37
18 19 1.070275 AGAAACGTCGGGTTGGGAC 59.930 57.895 0.00 0.00 39.30 4.46
19 20 1.070275 GAAACGTCGGGTTGGGACT 59.930 57.895 0.00 0.00 39.30 3.85
20 21 0.533531 GAAACGTCGGGTTGGGACTT 60.534 55.000 0.00 0.00 39.30 3.01
21 22 0.107066 AAACGTCGGGTTGGGACTTT 60.107 50.000 0.00 0.00 39.30 2.66
22 23 0.816421 AACGTCGGGTTGGGACTTTG 60.816 55.000 0.00 0.00 37.50 2.77
23 24 1.070105 CGTCGGGTTGGGACTTTGA 59.930 57.895 0.00 0.00 32.24 2.69
24 25 0.533308 CGTCGGGTTGGGACTTTGAA 60.533 55.000 0.00 0.00 32.24 2.69
25 26 1.235724 GTCGGGTTGGGACTTTGAAG 58.764 55.000 0.00 0.00 0.00 3.02
26 27 1.133363 TCGGGTTGGGACTTTGAAGA 58.867 50.000 0.00 0.00 0.00 2.87
27 28 1.202722 TCGGGTTGGGACTTTGAAGAC 60.203 52.381 0.00 0.00 0.00 3.01
28 29 1.235724 GGGTTGGGACTTTGAAGACG 58.764 55.000 0.00 0.00 0.00 4.18
29 30 1.202722 GGGTTGGGACTTTGAAGACGA 60.203 52.381 0.00 0.00 0.00 4.20
30 31 2.143925 GGTTGGGACTTTGAAGACGAG 58.856 52.381 0.00 0.00 0.00 4.18
31 32 1.531578 GTTGGGACTTTGAAGACGAGC 59.468 52.381 0.00 0.00 0.00 5.03
32 33 0.756294 TGGGACTTTGAAGACGAGCA 59.244 50.000 0.00 0.00 0.00 4.26
33 34 1.270305 TGGGACTTTGAAGACGAGCAG 60.270 52.381 0.00 0.00 0.00 4.24
34 35 0.793250 GGACTTTGAAGACGAGCAGC 59.207 55.000 0.00 0.00 0.00 5.25
35 36 1.606737 GGACTTTGAAGACGAGCAGCT 60.607 52.381 0.00 0.00 0.00 4.24
36 37 2.139118 GACTTTGAAGACGAGCAGCTT 58.861 47.619 0.00 0.00 0.00 3.74
37 38 1.869767 ACTTTGAAGACGAGCAGCTTG 59.130 47.619 8.26 8.26 0.00 4.01
38 39 0.588252 TTTGAAGACGAGCAGCTTGC 59.412 50.000 9.87 2.91 45.46 4.01
47 48 2.434884 GCAGCTTGCTGACGCCTA 60.435 61.111 24.67 0.00 40.96 3.93
48 49 2.744768 GCAGCTTGCTGACGCCTAC 61.745 63.158 24.67 2.94 40.96 3.18
49 50 2.103042 CAGCTTGCTGACGCCTACC 61.103 63.158 16.78 0.00 34.43 3.18
50 51 2.266055 GCTTGCTGACGCCTACCT 59.734 61.111 0.00 0.00 34.43 3.08
51 52 1.376037 GCTTGCTGACGCCTACCTT 60.376 57.895 0.00 0.00 34.43 3.50
52 53 1.362406 GCTTGCTGACGCCTACCTTC 61.362 60.000 0.00 0.00 34.43 3.46
53 54 0.037326 CTTGCTGACGCCTACCTTCA 60.037 55.000 0.00 0.00 34.43 3.02
54 55 0.037326 TTGCTGACGCCTACCTTCAG 60.037 55.000 0.00 0.00 41.42 3.02
55 56 0.898326 TGCTGACGCCTACCTTCAGA 60.898 55.000 2.02 0.00 41.10 3.27
56 57 0.458716 GCTGACGCCTACCTTCAGAC 60.459 60.000 2.02 0.00 41.10 3.51
57 58 0.179161 CTGACGCCTACCTTCAGACG 60.179 60.000 0.00 0.00 41.10 4.18
58 59 0.892358 TGACGCCTACCTTCAGACGT 60.892 55.000 0.00 0.00 36.30 4.34
59 60 0.179169 GACGCCTACCTTCAGACGTC 60.179 60.000 7.70 7.70 42.36 4.34
60 61 1.226323 CGCCTACCTTCAGACGTCG 60.226 63.158 10.46 5.48 0.00 5.12
61 62 1.139095 GCCTACCTTCAGACGTCGG 59.861 63.158 10.46 10.03 0.00 4.79
62 63 1.310933 GCCTACCTTCAGACGTCGGA 61.311 60.000 14.65 14.65 0.00 4.55
63 64 0.733729 CCTACCTTCAGACGTCGGAG 59.266 60.000 17.70 12.56 0.00 4.63
64 65 0.733729 CTACCTTCAGACGTCGGAGG 59.266 60.000 24.39 24.39 0.00 4.30
65 66 0.325933 TACCTTCAGACGTCGGAGGA 59.674 55.000 29.60 16.49 0.00 3.71
66 67 0.961358 ACCTTCAGACGTCGGAGGAG 60.961 60.000 29.60 20.51 0.00 3.69
67 68 1.658686 CCTTCAGACGTCGGAGGAGG 61.659 65.000 25.27 21.53 0.00 4.30
68 69 0.677098 CTTCAGACGTCGGAGGAGGA 60.677 60.000 20.40 4.58 0.00 3.71
69 70 0.959372 TTCAGACGTCGGAGGAGGAC 60.959 60.000 17.70 0.00 0.00 3.85
70 71 1.674651 CAGACGTCGGAGGAGGACA 60.675 63.158 10.41 0.00 34.04 4.02
71 72 1.032657 CAGACGTCGGAGGAGGACAT 61.033 60.000 10.41 0.00 34.04 3.06
72 73 0.323542 AGACGTCGGAGGAGGACATT 60.324 55.000 10.46 0.00 34.04 2.71
73 74 1.064906 AGACGTCGGAGGAGGACATTA 60.065 52.381 10.46 0.00 34.04 1.90
74 75 1.065251 GACGTCGGAGGAGGACATTAC 59.935 57.143 0.00 0.00 34.04 1.89
75 76 0.384669 CGTCGGAGGAGGACATTACC 59.615 60.000 0.00 0.00 34.04 2.85
76 77 0.384669 GTCGGAGGAGGACATTACCG 59.615 60.000 0.00 0.00 41.39 4.02
77 78 0.256752 TCGGAGGAGGACATTACCGA 59.743 55.000 0.00 0.00 45.36 4.69
78 79 0.669077 CGGAGGAGGACATTACCGAG 59.331 60.000 0.00 0.00 42.40 4.63
79 80 1.777941 GGAGGAGGACATTACCGAGT 58.222 55.000 0.00 0.00 34.73 4.18
80 81 1.682323 GGAGGAGGACATTACCGAGTC 59.318 57.143 0.00 0.00 34.73 3.36
81 82 1.334243 GAGGAGGACATTACCGAGTCG 59.666 57.143 5.29 5.29 35.63 4.18
94 95 1.536149 CGAGTCGGAGTTAGAAAGCG 58.464 55.000 4.10 0.00 0.00 4.68
95 96 1.129998 CGAGTCGGAGTTAGAAAGCGA 59.870 52.381 4.10 0.00 0.00 4.93
96 97 2.517935 GAGTCGGAGTTAGAAAGCGAC 58.482 52.381 0.00 0.00 0.00 5.19
97 98 1.135746 AGTCGGAGTTAGAAAGCGACG 60.136 52.381 0.00 0.00 0.00 5.12
98 99 1.135859 GTCGGAGTTAGAAAGCGACGA 60.136 52.381 0.00 0.00 0.00 4.20
99 100 1.135859 TCGGAGTTAGAAAGCGACGAC 60.136 52.381 0.00 0.00 0.00 4.34
100 101 1.135746 CGGAGTTAGAAAGCGACGACT 60.136 52.381 0.00 0.00 0.00 4.18
101 102 2.094894 CGGAGTTAGAAAGCGACGACTA 59.905 50.000 0.00 0.00 0.00 2.59
102 103 3.682921 GGAGTTAGAAAGCGACGACTAG 58.317 50.000 0.00 0.00 0.00 2.57
103 104 3.126686 GGAGTTAGAAAGCGACGACTAGT 59.873 47.826 0.00 0.00 0.00 2.57
104 105 4.080969 AGTTAGAAAGCGACGACTAGTG 57.919 45.455 0.00 0.00 0.00 2.74
105 106 3.119919 AGTTAGAAAGCGACGACTAGTGG 60.120 47.826 0.00 0.25 0.00 4.00
106 107 1.245732 AGAAAGCGACGACTAGTGGT 58.754 50.000 10.62 10.62 0.00 4.16
107 108 1.199558 AGAAAGCGACGACTAGTGGTC 59.800 52.381 23.77 23.77 41.28 4.02
108 109 1.199558 GAAAGCGACGACTAGTGGTCT 59.800 52.381 28.38 14.78 42.44 3.85
109 110 1.245732 AAGCGACGACTAGTGGTCTT 58.754 50.000 28.38 17.80 42.44 3.01
110 111 1.245732 AGCGACGACTAGTGGTCTTT 58.754 50.000 28.38 17.10 42.44 2.52
111 112 1.612463 AGCGACGACTAGTGGTCTTTT 59.388 47.619 28.38 15.07 42.44 2.27
112 113 2.035576 AGCGACGACTAGTGGTCTTTTT 59.964 45.455 28.38 13.08 42.44 1.94
143 144 8.926092 TCTGTGTATGCTAGAACTATCTATGT 57.074 34.615 0.00 0.00 37.52 2.29
148 149 9.975218 TGTATGCTAGAACTATCTATGTATCCA 57.025 33.333 0.00 0.00 37.52 3.41
201 202 2.818274 GTAGCAAACGGGCGAGGG 60.818 66.667 0.00 0.00 39.27 4.30
202 203 3.315949 TAGCAAACGGGCGAGGGT 61.316 61.111 0.00 0.00 39.27 4.34
203 204 3.599285 TAGCAAACGGGCGAGGGTG 62.599 63.158 0.00 0.00 39.27 4.61
205 206 3.353836 CAAACGGGCGAGGGTGTG 61.354 66.667 0.00 0.00 0.00 3.82
206 207 3.552384 AAACGGGCGAGGGTGTGA 61.552 61.111 0.00 0.00 0.00 3.58
207 208 3.109592 AAACGGGCGAGGGTGTGAA 62.110 57.895 0.00 0.00 0.00 3.18
208 209 2.406002 AAACGGGCGAGGGTGTGAAT 62.406 55.000 0.00 0.00 0.00 2.57
209 210 2.511600 CGGGCGAGGGTGTGAATC 60.512 66.667 0.00 0.00 0.00 2.52
210 211 2.124695 GGGCGAGGGTGTGAATCC 60.125 66.667 0.00 0.00 0.00 3.01
211 212 2.668632 GGCGAGGGTGTGAATCCA 59.331 61.111 0.00 0.00 0.00 3.41
212 213 1.745489 GGCGAGGGTGTGAATCCAC 60.745 63.158 0.00 0.00 43.46 4.02
213 214 1.296715 GCGAGGGTGTGAATCCACT 59.703 57.895 0.00 0.00 43.55 4.00
214 215 1.021390 GCGAGGGTGTGAATCCACTG 61.021 60.000 0.00 0.00 43.55 3.66
215 216 0.321671 CGAGGGTGTGAATCCACTGT 59.678 55.000 0.00 0.00 43.55 3.55
216 217 1.813513 GAGGGTGTGAATCCACTGTG 58.186 55.000 0.00 0.00 43.55 3.66
217 218 0.250901 AGGGTGTGAATCCACTGTGC 60.251 55.000 1.29 0.00 43.55 4.57
218 219 1.244019 GGGTGTGAATCCACTGTGCC 61.244 60.000 1.29 0.00 43.55 5.01
219 220 0.537143 GGTGTGAATCCACTGTGCCA 60.537 55.000 1.29 0.00 43.55 4.92
220 221 0.593128 GTGTGAATCCACTGTGCCAC 59.407 55.000 1.29 7.85 43.55 5.01
221 222 0.537143 TGTGAATCCACTGTGCCACC 60.537 55.000 1.29 0.00 43.55 4.61
222 223 1.302431 TGAATCCACTGTGCCACCG 60.302 57.895 1.29 0.00 0.00 4.94
223 224 1.003839 GAATCCACTGTGCCACCGA 60.004 57.895 1.29 0.00 0.00 4.69
224 225 1.298859 GAATCCACTGTGCCACCGAC 61.299 60.000 1.29 0.00 0.00 4.79
225 226 2.748058 AATCCACTGTGCCACCGACC 62.748 60.000 1.29 0.00 0.00 4.79
226 227 4.248842 CCACTGTGCCACCGACCA 62.249 66.667 1.29 0.00 0.00 4.02
227 228 2.666190 CACTGTGCCACCGACCAG 60.666 66.667 0.00 0.00 0.00 4.00
228 229 4.626081 ACTGTGCCACCGACCAGC 62.626 66.667 0.00 0.00 0.00 4.85
245 246 4.778143 CGGGCCCGGTGAGGAAAG 62.778 72.222 37.42 3.50 45.00 2.62
246 247 3.327404 GGGCCCGGTGAGGAAAGA 61.327 66.667 5.69 0.00 45.00 2.52
247 248 2.680370 GGGCCCGGTGAGGAAAGAT 61.680 63.158 5.69 0.00 45.00 2.40
248 249 1.452108 GGCCCGGTGAGGAAAGATG 60.452 63.158 0.00 0.00 45.00 2.90
249 250 1.452108 GCCCGGTGAGGAAAGATGG 60.452 63.158 0.00 0.00 45.00 3.51
250 251 1.452108 CCCGGTGAGGAAAGATGGC 60.452 63.158 0.00 0.00 45.00 4.40
251 252 1.815421 CCGGTGAGGAAAGATGGCG 60.815 63.158 0.00 0.00 45.00 5.69
252 253 1.218047 CGGTGAGGAAAGATGGCGA 59.782 57.895 0.00 0.00 0.00 5.54
253 254 0.807667 CGGTGAGGAAAGATGGCGAG 60.808 60.000 0.00 0.00 0.00 5.03
254 255 1.092345 GGTGAGGAAAGATGGCGAGC 61.092 60.000 0.00 0.00 0.00 5.03
255 256 1.153568 TGAGGAAAGATGGCGAGCG 60.154 57.895 0.00 0.00 0.00 5.03
256 257 2.512515 AGGAAAGATGGCGAGCGC 60.513 61.111 6.27 6.27 41.06 5.92
257 258 3.929948 GGAAAGATGGCGAGCGCG 61.930 66.667 5.14 5.14 43.06 6.86
276 277 3.764049 GCGCGTCCGTCTTGTGTC 61.764 66.667 8.43 0.00 36.67 3.67
277 278 3.103911 CGCGTCCGTCTTGTGTCC 61.104 66.667 0.00 0.00 0.00 4.02
278 279 3.103911 GCGTCCGTCTTGTGTCCG 61.104 66.667 0.00 0.00 0.00 4.79
279 280 3.103911 CGTCCGTCTTGTGTCCGC 61.104 66.667 0.00 0.00 0.00 5.54
280 281 3.103911 GTCCGTCTTGTGTCCGCG 61.104 66.667 0.00 0.00 0.00 6.46
296 297 4.520846 CGCCGACGCAAATCAGGC 62.521 66.667 0.00 0.00 44.00 4.85
297 298 3.127533 GCCGACGCAAATCAGGCT 61.128 61.111 0.00 0.00 44.06 4.58
298 299 3.093278 CCGACGCAAATCAGGCTC 58.907 61.111 0.00 0.00 0.00 4.70
299 300 1.741401 CCGACGCAAATCAGGCTCA 60.741 57.895 0.00 0.00 0.00 4.26
300 301 1.298157 CCGACGCAAATCAGGCTCAA 61.298 55.000 0.00 0.00 0.00 3.02
301 302 0.516877 CGACGCAAATCAGGCTCAAA 59.483 50.000 0.00 0.00 0.00 2.69
302 303 1.069296 CGACGCAAATCAGGCTCAAAA 60.069 47.619 0.00 0.00 0.00 2.44
303 304 2.604373 CGACGCAAATCAGGCTCAAAAA 60.604 45.455 0.00 0.00 0.00 1.94
304 305 3.578688 GACGCAAATCAGGCTCAAAAAT 58.421 40.909 0.00 0.00 0.00 1.82
305 306 3.319755 ACGCAAATCAGGCTCAAAAATG 58.680 40.909 0.00 0.00 0.00 2.32
306 307 2.669434 CGCAAATCAGGCTCAAAAATGG 59.331 45.455 0.00 0.00 0.00 3.16
307 308 3.004862 GCAAATCAGGCTCAAAAATGGG 58.995 45.455 0.00 0.00 0.00 4.00
308 309 3.004862 CAAATCAGGCTCAAAAATGGGC 58.995 45.455 0.00 0.00 0.00 5.36
309 310 1.197812 ATCAGGCTCAAAAATGGGCC 58.802 50.000 11.78 11.78 44.38 5.80
310 311 0.178938 TCAGGCTCAAAAATGGGCCA 60.179 50.000 20.96 9.61 46.23 5.36
311 312 0.248289 CAGGCTCAAAAATGGGCCAG 59.752 55.000 20.96 10.00 46.23 4.85
312 313 0.906282 AGGCTCAAAAATGGGCCAGG 60.906 55.000 20.96 0.00 46.23 4.45
313 314 0.904394 GGCTCAAAAATGGGCCAGGA 60.904 55.000 13.78 3.45 43.59 3.86
314 315 0.975887 GCTCAAAAATGGGCCAGGAA 59.024 50.000 13.78 0.00 0.00 3.36
315 316 1.556451 GCTCAAAAATGGGCCAGGAAT 59.444 47.619 13.78 0.00 0.00 3.01
316 317 2.678769 GCTCAAAAATGGGCCAGGAATG 60.679 50.000 13.78 9.06 0.00 2.67
317 318 1.907936 TCAAAAATGGGCCAGGAATGG 59.092 47.619 13.78 0.00 0.00 3.16
318 319 1.065272 CAAAAATGGGCCAGGAATGGG 60.065 52.381 13.78 0.00 0.00 4.00
319 320 0.118952 AAAATGGGCCAGGAATGGGT 59.881 50.000 13.78 0.00 0.00 4.51
320 321 0.325577 AAATGGGCCAGGAATGGGTC 60.326 55.000 13.78 0.00 0.00 4.46
321 322 2.572333 AATGGGCCAGGAATGGGTCG 62.572 60.000 13.78 0.00 0.00 4.79
322 323 4.506255 GGGCCAGGAATGGGTCGG 62.506 72.222 4.39 0.00 0.00 4.79
324 325 4.424711 GCCAGGAATGGGTCGGCA 62.425 66.667 0.00 0.00 42.50 5.69
325 326 2.124570 CCAGGAATGGGTCGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
326 327 2.124570 CAGGAATGGGTCGGCAGG 60.125 66.667 0.00 0.00 0.00 4.85
327 328 4.115199 AGGAATGGGTCGGCAGGC 62.115 66.667 0.00 0.00 0.00 4.85
340 341 4.735132 CAGGCGGACGAAAGCGGA 62.735 66.667 0.00 0.00 43.17 5.54
341 342 4.736896 AGGCGGACGAAAGCGGAC 62.737 66.667 0.00 0.00 43.17 4.79
356 357 4.160635 GACGCGCGTCCATTTGGG 62.161 66.667 44.30 10.93 39.08 4.12
358 359 4.160635 CGCGCGTCCATTTGGGTC 62.161 66.667 24.19 0.00 38.11 4.46
363 364 3.174788 GTCCATTTGGGTCGACGC 58.825 61.111 24.41 24.41 38.11 5.19
364 365 2.433491 TCCATTTGGGTCGACGCG 60.433 61.111 25.18 3.53 38.11 6.01
365 366 2.740826 CCATTTGGGTCGACGCGT 60.741 61.111 25.18 13.85 0.00 6.01
366 367 2.322081 CCATTTGGGTCGACGCGTT 61.322 57.895 25.18 11.31 0.00 4.84
367 368 1.154488 CATTTGGGTCGACGCGTTG 60.154 57.895 25.18 20.76 0.00 4.10
368 369 2.322081 ATTTGGGTCGACGCGTTGG 61.322 57.895 25.66 15.24 0.00 3.77
369 370 2.718747 ATTTGGGTCGACGCGTTGGA 62.719 55.000 25.66 17.35 0.00 3.53
370 371 4.651008 TGGGTCGACGCGTTGGAC 62.651 66.667 26.61 26.61 0.00 4.02
377 378 4.922026 ACGCGTTGGACCGGCTTT 62.922 61.111 5.58 0.00 0.00 3.51
378 379 3.656045 CGCGTTGGACCGGCTTTT 61.656 61.111 0.00 0.00 0.00 2.27
379 380 2.725641 GCGTTGGACCGGCTTTTT 59.274 55.556 0.00 0.00 0.00 1.94
393 394 3.321967 TTTTTGTCCGCGTCGACC 58.678 55.556 10.58 1.77 31.35 4.79
394 395 2.246042 TTTTTGTCCGCGTCGACCC 61.246 57.895 10.58 0.00 31.35 4.46
395 396 2.919960 TTTTTGTCCGCGTCGACCCA 62.920 55.000 10.58 0.00 31.35 4.51
396 397 2.919960 TTTTGTCCGCGTCGACCCAA 62.920 55.000 10.58 2.82 31.35 4.12
397 398 2.919960 TTTGTCCGCGTCGACCCAAA 62.920 55.000 10.58 8.61 31.35 3.28
398 399 3.408851 GTCCGCGTCGACCCAAAC 61.409 66.667 10.58 0.00 0.00 2.93
402 403 3.408851 GCGTCGACCCAAACGGAC 61.409 66.667 10.58 0.00 39.24 4.79
436 437 4.189580 GGCCGCCCCATTGCTCTA 62.190 66.667 0.00 0.00 0.00 2.43
437 438 2.124320 GCCGCCCCATTGCTCTAA 60.124 61.111 0.00 0.00 0.00 2.10
438 439 1.752694 GCCGCCCCATTGCTCTAAA 60.753 57.895 0.00 0.00 0.00 1.85
439 440 1.728490 GCCGCCCCATTGCTCTAAAG 61.728 60.000 0.00 0.00 0.00 1.85
440 441 0.107214 CCGCCCCATTGCTCTAAAGA 60.107 55.000 0.00 0.00 0.00 2.52
441 442 1.303309 CGCCCCATTGCTCTAAAGAG 58.697 55.000 2.47 2.47 44.75 2.85
442 443 1.134401 CGCCCCATTGCTCTAAAGAGA 60.134 52.381 11.20 0.00 44.74 3.10
443 444 2.680805 CGCCCCATTGCTCTAAAGAGAA 60.681 50.000 11.20 0.00 44.74 2.87
452 453 8.919661 CCATTGCTCTAAAGAGAAAAATTCAAC 58.080 33.333 11.20 0.00 42.61 3.18
474 475 4.202357 ACTGTGAATAGTGTCAGCTTTGGA 60.202 41.667 0.00 0.00 0.00 3.53
475 476 4.910195 TGTGAATAGTGTCAGCTTTGGAT 58.090 39.130 0.00 0.00 0.00 3.41
498 499 8.246180 GGATGAATAGTGTTTGACAACATTCAT 58.754 33.333 20.17 20.17 44.81 2.57
503 504 9.466497 AATAGTGTTTGACAACATTCATATCCT 57.534 29.630 0.00 0.00 44.85 3.24
504 505 7.765695 AGTGTTTGACAACATTCATATCCTT 57.234 32.000 0.00 0.00 44.85 3.36
552 553 9.377312 AGATTGAATTAGTAGCTGAAACTTCTC 57.623 33.333 0.00 0.00 0.00 2.87
556 557 8.367911 TGAATTAGTAGCTGAAACTTCTCAAGA 58.632 33.333 0.00 0.00 0.00 3.02
575 576 8.506437 TCTCAAGATTGTACATCAAACATTGAC 58.494 33.333 0.00 0.00 43.48 3.18
580 581 5.337219 TGTACATCAAACATTGACGTGTC 57.663 39.130 0.00 0.00 43.48 3.67
582 583 6.217294 TGTACATCAAACATTGACGTGTCTA 58.783 36.000 0.00 0.00 43.48 2.59
583 584 6.702282 TGTACATCAAACATTGACGTGTCTAA 59.298 34.615 0.00 0.00 43.48 2.10
585 586 7.202016 ACATCAAACATTGACGTGTCTAAAT 57.798 32.000 0.00 0.00 43.48 1.40
586 587 7.648142 ACATCAAACATTGACGTGTCTAAATT 58.352 30.769 0.00 0.00 43.48 1.82
648 650 8.924511 AGAAAAGTTAACCTCATTGATTCTCA 57.075 30.769 0.88 0.00 0.00 3.27
649 651 8.787852 AGAAAAGTTAACCTCATTGATTCTCAC 58.212 33.333 0.88 0.00 0.00 3.51
650 652 7.454260 AAAGTTAACCTCATTGATTCTCACC 57.546 36.000 0.88 0.00 0.00 4.02
651 653 6.380079 AGTTAACCTCATTGATTCTCACCT 57.620 37.500 0.88 0.00 0.00 4.00
652 654 7.496346 AGTTAACCTCATTGATTCTCACCTA 57.504 36.000 0.88 0.00 0.00 3.08
653 655 7.331791 AGTTAACCTCATTGATTCTCACCTAC 58.668 38.462 0.88 0.00 0.00 3.18
666 701 4.809193 TCTCACCTACAAGCAGATCCTAT 58.191 43.478 0.00 0.00 0.00 2.57
667 702 4.586421 TCTCACCTACAAGCAGATCCTATG 59.414 45.833 0.00 0.00 0.00 2.23
696 731 3.822192 CCGATCAGACGGCCACGA 61.822 66.667 2.24 0.00 46.20 4.35
697 732 2.278206 CGATCAGACGGCCACGAG 60.278 66.667 2.24 0.00 44.60 4.18
698 733 2.105128 GATCAGACGGCCACGAGG 59.895 66.667 2.24 0.00 44.60 4.63
756 791 1.372683 CTGGACCCACCTGTCAGTG 59.627 63.158 0.00 0.00 39.86 3.66
765 800 0.251832 ACCTGTCAGTGAGATCCCGT 60.252 55.000 0.00 0.00 0.00 5.28
1015 1056 1.006805 GAGATGGAGATGGACGCGG 60.007 63.158 12.47 0.00 0.00 6.46
1186 1227 1.179174 AGCTTTGGGGCGAAGTTTCC 61.179 55.000 0.00 0.00 37.29 3.13
1219 1260 2.365901 ATTCGGCGGGAGGGGTTA 60.366 61.111 7.21 0.00 0.00 2.85
1220 1261 1.974973 GATTCGGCGGGAGGGGTTAA 61.975 60.000 7.21 0.00 0.00 2.01
1222 1263 4.478371 CGGCGGGAGGGGTTAACC 62.478 72.222 16.85 16.85 39.11 2.85
1277 1321 3.376918 GGCTGGGCTGCTGTTTCC 61.377 66.667 0.00 0.00 0.00 3.13
1289 1333 2.224018 TGCTGTTTCCTGTTGCATTTCC 60.224 45.455 0.00 0.00 0.00 3.13
1319 1363 2.765108 TTCTCGATCGAGCTGACATC 57.235 50.000 34.92 0.00 41.71 3.06
1376 1440 0.178987 TATGTTGGCAACGGGTTGGT 60.179 50.000 24.03 7.54 40.74 3.67
1397 1461 2.948979 TGCGGATTATGGTAGCCTTTTG 59.051 45.455 0.00 0.00 0.00 2.44
1409 1473 7.732222 TGGTAGCCTTTTGGATCAATTATTT 57.268 32.000 0.00 0.00 44.07 1.40
1432 1496 2.665603 GGGTCTGGTCTCTGGTGC 59.334 66.667 0.00 0.00 0.00 5.01
1454 1518 0.250234 TGCTGCCAATAGCTCGACTT 59.750 50.000 0.00 0.00 44.01 3.01
1478 1542 0.455972 GAGTCTGAGAGTGACGCAGC 60.456 60.000 0.00 0.00 44.11 5.25
1491 1555 1.800315 CGCAGCTGCTTGTTGATGC 60.800 57.895 34.22 7.17 39.32 3.91
1566 1631 3.948473 TCGTGAGGTGAATTTTTGGTTCA 59.052 39.130 0.00 0.00 33.46 3.18
1605 1670 4.402155 TCGGGAAATTGGAATTGATTCTGG 59.598 41.667 3.94 0.00 37.00 3.86
1652 1721 5.220854 CCTGTTTATACTGTTATGTGCAGGC 60.221 44.000 0.00 0.00 38.22 4.85
1673 1742 5.054477 GGCGAGTTATTTAGAATGTAGGCA 58.946 41.667 0.00 0.00 0.00 4.75
1703 1772 6.524101 TTAACAACCCTCCTAATGCATTTC 57.476 37.500 18.75 0.00 0.00 2.17
1716 1785 4.534647 ATGCATTTCTTATGGTGGGGTA 57.465 40.909 0.00 0.00 0.00 3.69
1740 1809 3.323751 TTTAGGTTGTAGGAGAACGGC 57.676 47.619 0.00 0.00 0.00 5.68
1760 1829 4.803908 GGGCTGTGGCTAGTGGGC 62.804 72.222 0.00 0.00 38.73 5.36
1822 1891 9.524496 TGTCTACTGTATTAGAAGTTGGAACTA 57.476 33.333 0.00 0.00 38.57 2.24
1909 1978 5.046878 TGACCTTGTGTTCGTATATGGTCTT 60.047 40.000 0.00 0.00 42.09 3.01
1928 1997 6.004574 GGTCTTCTTGAATGGGAACTAACTT 58.995 40.000 0.00 0.00 0.00 2.66
1994 2094 4.664150 TCAAAACCTTGTGTTGGATTCC 57.336 40.909 0.00 0.00 37.23 3.01
1998 2098 1.203050 ACCTTGTGTTGGATTCCTGGG 60.203 52.381 3.95 0.00 0.00 4.45
2256 2356 8.655651 TGTTTCCTGTGTTGGAATTTTTATTC 57.344 30.769 0.00 0.00 44.55 1.75
2278 2378 4.489306 GCTTAGAAGGAAGCTTAAGGGA 57.511 45.455 0.00 0.00 46.85 4.20
2279 2379 4.447290 GCTTAGAAGGAAGCTTAAGGGAG 58.553 47.826 0.00 0.00 46.85 4.30
2280 2380 4.447290 CTTAGAAGGAAGCTTAAGGGAGC 58.553 47.826 0.00 0.00 43.02 4.70
2281 2381 1.562008 AGAAGGAAGCTTAAGGGAGCC 59.438 52.381 0.00 0.00 43.74 4.70
2282 2382 1.562008 GAAGGAAGCTTAAGGGAGCCT 59.438 52.381 0.00 0.00 43.74 4.58
2283 2383 1.675007 AGGAAGCTTAAGGGAGCCTT 58.325 50.000 0.00 0.00 46.63 4.35
2284 2384 1.283321 AGGAAGCTTAAGGGAGCCTTG 59.717 52.381 0.00 0.00 44.44 3.61
2285 2385 1.683319 GGAAGCTTAAGGGAGCCTTGG 60.683 57.143 0.00 0.00 44.44 3.61
2286 2386 0.323816 AAGCTTAAGGGAGCCTTGGC 60.324 55.000 0.00 2.97 44.44 4.52
2287 2387 1.000896 GCTTAAGGGAGCCTTGGCA 60.001 57.895 14.54 0.00 44.44 4.92
2288 2388 1.315981 GCTTAAGGGAGCCTTGGCAC 61.316 60.000 14.54 7.49 44.44 5.01
2289 2389 1.002624 TTAAGGGAGCCTTGGCACG 60.003 57.895 14.54 0.00 44.44 5.34
2290 2390 3.622060 TAAGGGAGCCTTGGCACGC 62.622 63.158 14.54 15.27 44.44 5.34
2293 2393 4.043200 GGAGCCTTGGCACGCAAC 62.043 66.667 14.54 2.43 0.00 4.17
2294 2394 4.389576 GAGCCTTGGCACGCAACG 62.390 66.667 14.54 0.00 0.00 4.10
2297 2397 2.666862 CCTTGGCACGCAACGGTA 60.667 61.111 0.00 0.00 0.00 4.02
2298 2398 2.255172 CCTTGGCACGCAACGGTAA 61.255 57.895 0.00 0.00 0.00 2.85
2299 2399 1.649815 CTTGGCACGCAACGGTAAA 59.350 52.632 0.00 0.00 0.00 2.01
2300 2400 0.385473 CTTGGCACGCAACGGTAAAG 60.385 55.000 0.00 0.00 0.00 1.85
2301 2401 2.127003 GGCACGCAACGGTAAAGC 60.127 61.111 0.00 0.00 0.00 3.51
2302 2402 2.613506 GGCACGCAACGGTAAAGCT 61.614 57.895 0.00 0.00 0.00 3.74
2303 2403 1.440353 GCACGCAACGGTAAAGCTG 60.440 57.895 0.00 0.00 0.00 4.24
2304 2404 1.938861 CACGCAACGGTAAAGCTGT 59.061 52.632 0.00 0.00 38.60 4.40
2305 2405 0.306533 CACGCAACGGTAAAGCTGTT 59.693 50.000 0.00 0.00 46.91 3.16
2309 2409 3.414486 AACGGTAAAGCTGTTGCCT 57.586 47.368 11.70 0.88 44.44 4.75
2310 2410 1.687563 AACGGTAAAGCTGTTGCCTT 58.312 45.000 11.70 2.94 44.44 4.35
2311 2411 2.554370 ACGGTAAAGCTGTTGCCTTA 57.446 45.000 11.70 0.00 40.80 2.69
2312 2412 2.148768 ACGGTAAAGCTGTTGCCTTAC 58.851 47.619 11.70 5.14 42.37 2.34
2313 2413 1.127951 CGGTAAAGCTGTTGCCTTACG 59.872 52.381 11.70 0.00 43.40 3.18
2314 2414 2.419667 GGTAAAGCTGTTGCCTTACGA 58.580 47.619 0.00 0.00 43.40 3.43
2315 2415 2.159037 GGTAAAGCTGTTGCCTTACGAC 59.841 50.000 0.00 0.00 43.40 4.34
2316 2416 1.235724 AAAGCTGTTGCCTTACGACC 58.764 50.000 0.00 0.00 40.80 4.79
2317 2417 0.107831 AAGCTGTTGCCTTACGACCA 59.892 50.000 0.00 0.00 40.80 4.02
2318 2418 0.324943 AGCTGTTGCCTTACGACCAT 59.675 50.000 0.00 0.00 40.80 3.55
2319 2419 0.447801 GCTGTTGCCTTACGACCATG 59.552 55.000 0.00 0.00 0.00 3.66
2320 2420 1.943968 GCTGTTGCCTTACGACCATGA 60.944 52.381 0.00 0.00 0.00 3.07
2321 2421 2.002586 CTGTTGCCTTACGACCATGAG 58.997 52.381 0.00 0.00 0.00 2.90
2322 2422 1.338674 TGTTGCCTTACGACCATGAGG 60.339 52.381 0.00 0.00 42.21 3.86
2332 2432 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
2333 2433 1.447838 CCATGAGGTCACGGGTTCG 60.448 63.158 0.00 0.00 43.02 3.95
2334 2434 1.589630 CATGAGGTCACGGGTTCGA 59.410 57.895 0.00 0.00 40.11 3.71
2335 2435 0.458543 CATGAGGTCACGGGTTCGAG 60.459 60.000 0.00 0.00 40.11 4.04
2336 2436 0.898789 ATGAGGTCACGGGTTCGAGT 60.899 55.000 0.00 0.00 40.11 4.18
2337 2437 1.212229 GAGGTCACGGGTTCGAGTC 59.788 63.158 0.00 0.00 40.11 3.36
2338 2438 2.210341 GAGGTCACGGGTTCGAGTCC 62.210 65.000 0.82 0.82 40.11 3.85
2339 2439 2.273912 GGTCACGGGTTCGAGTCCT 61.274 63.158 8.28 0.00 40.11 3.85
2340 2440 1.080705 GTCACGGGTTCGAGTCCTG 60.081 63.158 13.65 13.65 40.11 3.86
2341 2441 2.261671 CACGGGTTCGAGTCCTGG 59.738 66.667 17.72 9.36 40.11 4.45
2342 2442 2.116772 ACGGGTTCGAGTCCTGGA 59.883 61.111 17.72 0.00 40.11 3.86
2343 2443 1.532316 ACGGGTTCGAGTCCTGGAA 60.532 57.895 17.72 0.00 40.11 3.53
2344 2444 1.117142 ACGGGTTCGAGTCCTGGAAA 61.117 55.000 17.72 0.00 40.11 3.13
2345 2445 0.669625 CGGGTTCGAGTCCTGGAAAC 60.670 60.000 0.00 0.00 39.00 2.78
2346 2446 0.395312 GGGTTCGAGTCCTGGAAACA 59.605 55.000 8.95 0.00 36.84 2.83
2357 2457 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
2358 2458 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
2359 2459 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
2360 2460 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
2361 2461 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
2362 2462 3.572584 GAAACAGCCTCTTGCAGAAATG 58.427 45.455 0.00 0.00 44.83 2.32
2363 2463 0.886563 ACAGCCTCTTGCAGAAATGC 59.113 50.000 0.00 0.00 44.83 3.56
2364 2464 0.885879 CAGCCTCTTGCAGAAATGCA 59.114 50.000 0.00 0.00 44.83 3.96
2365 2465 1.135373 CAGCCTCTTGCAGAAATGCAG 60.135 52.381 2.87 0.00 46.21 4.41
2366 2466 0.172803 GCCTCTTGCAGAAATGCAGG 59.827 55.000 6.04 6.04 46.21 4.85
2367 2467 0.815734 CCTCTTGCAGAAATGCAGGG 59.184 55.000 11.70 8.10 46.21 4.45
2368 2468 1.615116 CCTCTTGCAGAAATGCAGGGA 60.615 52.381 11.70 9.29 46.21 4.20
2369 2469 2.165167 CTCTTGCAGAAATGCAGGGAA 58.835 47.619 11.70 0.00 46.21 3.97
2370 2470 2.559668 CTCTTGCAGAAATGCAGGGAAA 59.440 45.455 11.70 0.00 46.21 3.13
2371 2471 2.559668 TCTTGCAGAAATGCAGGGAAAG 59.440 45.455 11.70 3.07 46.21 2.62
2372 2472 1.259609 TGCAGAAATGCAGGGAAAGG 58.740 50.000 0.00 0.00 40.23 3.11
2373 2473 0.108472 GCAGAAATGCAGGGAAAGGC 60.108 55.000 0.00 0.00 34.41 4.35
2374 2474 1.553706 CAGAAATGCAGGGAAAGGCT 58.446 50.000 0.00 0.00 0.00 4.58
2375 2475 1.203994 CAGAAATGCAGGGAAAGGCTG 59.796 52.381 0.00 0.00 0.00 4.85
2376 2476 0.108472 GAAATGCAGGGAAAGGCTGC 60.108 55.000 0.00 0.00 43.67 5.25
2377 2477 1.880819 AAATGCAGGGAAAGGCTGCG 61.881 55.000 0.00 0.00 46.05 5.18
2378 2478 3.574074 ATGCAGGGAAAGGCTGCGT 62.574 57.895 0.00 0.00 46.05 5.24
2379 2479 2.046314 GCAGGGAAAGGCTGCGTA 60.046 61.111 0.00 0.00 34.32 4.42
2380 2480 2.399356 GCAGGGAAAGGCTGCGTAC 61.399 63.158 0.00 0.00 34.32 3.67
2381 2481 1.003839 CAGGGAAAGGCTGCGTACA 60.004 57.895 0.00 0.00 0.00 2.90
2382 2482 0.605319 CAGGGAAAGGCTGCGTACAA 60.605 55.000 0.00 0.00 0.00 2.41
2383 2483 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
2384 2484 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
2385 2485 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
2386 2486 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
2387 2487 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
2388 2488 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
2389 2489 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
2390 2490 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
2391 2491 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
2392 2492 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
2393 2493 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
2394 2494 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
2395 2495 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
2396 2496 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
2397 2497 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
2402 2502 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
2403 2503 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
2404 2504 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
2405 2505 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
2406 2506 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
2407 2507 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
2408 2508 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
2409 2509 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
2410 2510 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
2417 2517 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
2444 2544 2.825836 GGAGCTTCATGCACCGGG 60.826 66.667 6.32 0.00 42.21 5.73
2445 2545 3.512516 GAGCTTCATGCACCGGGC 61.513 66.667 6.32 7.25 45.94 6.13
2446 2546 3.984193 GAGCTTCATGCACCGGGCT 62.984 63.158 6.32 0.81 45.94 5.19
2447 2547 3.818787 GCTTCATGCACCGGGCTG 61.819 66.667 6.32 7.15 45.15 4.85
2448 2548 3.818787 CTTCATGCACCGGGCTGC 61.819 66.667 6.32 8.50 45.15 5.25
2455 2555 3.399181 CACCGGGCTGCCCTTAGA 61.399 66.667 33.39 0.00 42.67 2.10
2456 2556 2.609610 ACCGGGCTGCCCTTAGAA 60.610 61.111 33.39 0.00 42.67 2.10
2457 2557 2.190578 CCGGGCTGCCCTTAGAAG 59.809 66.667 33.39 17.58 42.67 2.85
2458 2558 2.190578 CGGGCTGCCCTTAGAAGG 59.809 66.667 33.39 13.83 42.67 3.46
2701 2801 5.049129 GCATGAACTCTTTACTTGTCTTGCT 60.049 40.000 0.00 0.00 0.00 3.91
2715 2815 8.671384 ACTTGTCTTGCTACATACAGTAAAAA 57.329 30.769 0.00 0.00 30.92 1.94
2739 2839 6.635030 ATTTCCTGTACTTCTTTGTTGACC 57.365 37.500 0.00 0.00 0.00 4.02
2757 2857 6.970043 TGTTGACCGAGATTTAACTTTTTGTG 59.030 34.615 0.00 0.00 0.00 3.33
2800 2900 8.790718 AGCAATCTGAATGATATAACACCATTC 58.209 33.333 0.00 0.00 43.73 2.67
3236 3345 3.064900 GCATAAGGCCTAGGGAGATTG 57.935 52.381 5.16 0.00 36.11 2.67
3305 3414 6.399639 AGAAACTAGCTGTAAGATCCTAGC 57.600 41.667 0.00 0.00 34.07 3.42
3340 3451 3.098377 CCATGATTGGAATGTGGAACCA 58.902 45.455 0.00 0.00 46.92 3.67
3368 3479 7.941795 AGCATGAAGAAAATTTGTCTTTGAG 57.058 32.000 3.36 0.00 35.46 3.02
3432 3555 3.202829 ACGCCCTTCTAGTGTCAAAAA 57.797 42.857 0.00 0.00 0.00 1.94
3434 3557 2.875933 CGCCCTTCTAGTGTCAAAAACA 59.124 45.455 0.00 0.00 34.78 2.83
3610 3733 3.431766 GCAATATGTAGGTCGAAGGTGGT 60.432 47.826 0.00 0.00 0.00 4.16
3650 3773 3.441101 AGTGCAAGTGAGGATGGTACTA 58.559 45.455 0.00 0.00 0.00 1.82
3772 3895 3.260884 TCCGCTTCTATTGTGGTTTCTCT 59.739 43.478 0.00 0.00 36.54 3.10
3854 3977 5.357032 GCCAGTTTTACTATGGTAGCACATT 59.643 40.000 0.00 0.00 36.43 2.71
4190 4357 7.667043 TTCCAGTTTCTACATTACATGTGTC 57.333 36.000 9.11 0.00 44.60 3.67
4253 4420 0.252057 TGATCCTCCCAGACAACCGA 60.252 55.000 0.00 0.00 0.00 4.69
4534 4701 5.371526 TGCTGAGAATGTGAGTTTTTCTCT 58.628 37.500 11.78 0.00 43.64 3.10
4593 4760 3.270877 CATGGTAAAGGTGGCAGTAGTC 58.729 50.000 0.00 0.00 0.00 2.59
4668 4835 9.691362 GGTTGCTTTAACTTGATTATTTGAGAA 57.309 29.630 0.00 0.00 39.31 2.87
4722 4889 7.118723 TCCCAGAAATCATGCTACAGTATTTT 58.881 34.615 0.00 0.00 0.00 1.82
4772 4939 9.213799 AGTTTGAGTTCAGAATTCTGTTATCTC 57.786 33.333 29.80 27.14 44.12 2.75
4781 4948 7.335422 TCAGAATTCTGTTATCTCTTGCTTTCC 59.665 37.037 29.80 0.00 44.12 3.13
4782 4949 6.314896 AGAATTCTGTTATCTCTTGCTTTCCG 59.685 38.462 7.30 0.00 0.00 4.30
4787 4954 4.246458 GTTATCTCTTGCTTTCCGAGTGT 58.754 43.478 0.00 0.00 0.00 3.55
4844 5013 5.645067 TGCATTGTAATCAGAGGAAGTCAAG 59.355 40.000 0.00 0.00 0.00 3.02
4976 5145 4.621991 CTCCCTTTGTGTATGTATCCTCG 58.378 47.826 0.00 0.00 0.00 4.63
5370 6280 9.871238 TCAGGTAGATATGTTGAAGAAACTTAC 57.129 33.333 0.00 0.00 39.70 2.34
5377 6287 4.904116 TGTTGAAGAAACTTACGCAAGTG 58.096 39.130 0.80 0.00 44.41 3.16
5462 6372 2.651382 TGAGGCCATGGAATCTGATG 57.349 50.000 18.40 0.00 0.00 3.07
5792 6798 2.640826 TGGTCTAACCCTGGTACTTTGG 59.359 50.000 0.00 0.00 37.50 3.28
5862 6868 6.597280 AGATTCTAAATCTGTGTTCAAGCCTC 59.403 38.462 1.50 0.00 0.00 4.70
5902 6913 6.043411 GCTACCTATTCTTTGTCAGACGAAT 58.957 40.000 3.51 5.69 0.00 3.34
5969 6980 2.420058 ACCGATTTGATCACCCCTTC 57.580 50.000 0.00 0.00 0.00 3.46
5985 6996 3.370527 CCCCTTCGGTTAATCATGTCTGT 60.371 47.826 0.00 0.00 0.00 3.41
6013 7024 7.857456 TGATTGGCTCCTTGTAGTTCTATAAA 58.143 34.615 0.00 0.00 0.00 1.40
6119 7138 4.162040 AGCCTGGAGTGATAAATGAAGG 57.838 45.455 0.00 0.00 0.00 3.46
6122 7141 4.455606 CCTGGAGTGATAAATGAAGGGAC 58.544 47.826 0.00 0.00 0.00 4.46
6130 7149 5.414765 GTGATAAATGAAGGGACGGAAACTT 59.585 40.000 0.00 0.00 0.00 2.66
6176 7195 6.588719 AATATGTGCTTTGCCTTTTGTAGA 57.411 33.333 0.00 0.00 0.00 2.59
6197 7216 0.980423 AGGAAGACTGAAGGAGGCAC 59.020 55.000 0.00 0.00 27.95 5.01
6297 7316 1.349026 ACTTGCTGCTGGTGAGTACAT 59.651 47.619 0.00 0.00 0.00 2.29
6298 7317 2.224621 ACTTGCTGCTGGTGAGTACATT 60.225 45.455 0.00 0.00 0.00 2.71
6299 7318 2.566833 TGCTGCTGGTGAGTACATTT 57.433 45.000 0.00 0.00 0.00 2.32
6300 7319 2.153645 TGCTGCTGGTGAGTACATTTG 58.846 47.619 0.00 0.00 0.00 2.32
6301 7320 2.224499 TGCTGCTGGTGAGTACATTTGA 60.224 45.455 0.00 0.00 0.00 2.69
6302 7321 2.160417 GCTGCTGGTGAGTACATTTGAC 59.840 50.000 0.00 0.00 0.00 3.18
6303 7322 3.402110 CTGCTGGTGAGTACATTTGACA 58.598 45.455 0.00 0.00 0.00 3.58
6439 7465 6.537660 GCTCAGTAACCTGTTAATATTCCGTT 59.462 38.462 0.00 0.00 39.82 4.44
6441 7467 8.483307 TCAGTAACCTGTTAATATTCCGTTTC 57.517 34.615 0.00 0.00 39.82 2.78
6442 7468 7.276218 TCAGTAACCTGTTAATATTCCGTTTCG 59.724 37.037 0.00 0.00 39.82 3.46
6500 7526 8.946935 CAAGAAACATATACATGCAAATGTACG 58.053 33.333 2.32 0.00 39.53 3.67
6612 7638 3.764434 AGCTTCTGGTATTGAACTCGAGA 59.236 43.478 21.68 0.00 0.00 4.04
6689 7715 8.499162 GTTGCTTGTATCCAGAATATGTGATAC 58.501 37.037 8.53 8.53 39.74 2.24
6701 7728 8.387354 CAGAATATGTGATACGTTGCTGTTAAA 58.613 33.333 0.00 0.00 0.00 1.52
6707 7734 8.276060 TGTGATACGTTGCTGTTAAATTTTTC 57.724 30.769 0.00 0.00 0.00 2.29
6870 7897 2.446848 ATCATCACAGGAGGGCCGG 61.447 63.158 0.00 0.00 39.96 6.13
6957 7984 1.539065 CGTGATAGTGATCCAGGTGCC 60.539 57.143 0.00 0.00 0.00 5.01
7003 8030 1.066858 TGCACCGAAGAGAGGATCAAC 60.067 52.381 0.00 0.00 37.82 3.18
7091 8118 7.674348 TGAGGTTCTTTCTTTCTCATCCTACTA 59.326 37.037 0.00 0.00 30.58 1.82
7210 8249 5.451659 CCGGATGTTGCCATTGATATGAAAA 60.452 40.000 0.00 0.00 33.37 2.29
7510 8550 7.857734 TTCTTATCATCGGTAATGCTTTTGA 57.142 32.000 0.00 0.00 35.17 2.69
7534 8575 7.750458 TGAATTAAAATAAGAGTGCAAAGCTCG 59.250 33.333 0.00 0.00 37.99 5.03
7639 9927 6.296026 TCCTAGATTTTGGTGTGGCATATAC 58.704 40.000 0.00 0.00 0.00 1.47
7825 10116 0.474184 CCAGACCCACTTGTGAAGGT 59.526 55.000 1.89 2.05 34.57 3.50
7841 10132 5.278604 GTGAAGGTCACGTTAATTTTTGCT 58.721 37.500 0.00 0.00 37.67 3.91
7845 10136 5.040635 AGGTCACGTTAATTTTTGCTTGTG 58.959 37.500 0.00 0.00 0.00 3.33
7852 10143 7.270365 CACGTTAATTTTTGCTTGTGATACGAT 59.730 33.333 0.00 0.00 0.00 3.73
7862 10153 4.355437 CTTGTGATACGATGACTGAGACC 58.645 47.826 0.00 0.00 0.00 3.85
7994 10285 3.181487 CCAGCAGCGCTAAAATTACCATT 60.181 43.478 10.99 0.00 36.40 3.16
8021 10312 4.330074 CACTTAAAGGTAGGCTCGTTGATG 59.670 45.833 0.00 0.00 0.00 3.07
8044 10335 5.235616 TGAAAGTTGGACGTGAACTCATTAC 59.764 40.000 9.43 2.79 32.33 1.89
8074 10365 6.530913 TTTTTGCGATAGATATGTCAGAGC 57.469 37.500 0.00 0.00 39.76 4.09
8173 10464 9.098355 TGATGATAGTTTACTCAAAGTATGTGC 57.902 33.333 2.93 0.00 39.38 4.57
8193 10484 8.706492 ATGTGCAGACCATTAAATTTAATGTG 57.294 30.769 33.37 28.05 45.29 3.21
8236 10527 3.628942 TGCCTAATGCTGTATTGCTCTTG 59.371 43.478 0.97 0.00 42.00 3.02
8345 10636 2.711009 CAGGGGATGGAGCTGGTAATTA 59.289 50.000 0.00 0.00 0.00 1.40
8393 10684 5.016831 TCCTTGAGTACTGCTTCTCATGTA 58.983 41.667 0.00 0.00 39.85 2.29
8546 10837 5.904362 AATTTGCCCTCACTATTCACTTC 57.096 39.130 0.00 0.00 0.00 3.01
8676 10967 1.206115 CCGCAACCGTGAAACTTTGC 61.206 55.000 0.00 0.00 44.98 3.68
8745 11036 5.771469 TGACTTGCAATGAAATTACCACAG 58.229 37.500 0.00 0.00 32.46 3.66
8822 11116 9.606631 AGAAACTAGCTAGTAATGATTTTCCTG 57.393 33.333 26.29 0.00 34.99 3.86
8831 11125 7.739498 AGTAATGATTTTCCTGTGTTACGTT 57.261 32.000 0.00 0.00 0.00 3.99
8998 11299 5.279256 CCCAACATTTTACTCGGGACAAATT 60.279 40.000 0.00 0.00 35.57 1.82
9026 11327 4.694760 ATATGCATTGAGCTAGGTCACA 57.305 40.909 23.76 18.27 45.94 3.58
9031 11332 3.070159 GCATTGAGCTAGGTCACAGGATA 59.930 47.826 23.76 9.07 41.15 2.59
9085 11386 6.015856 TCTGATTTCGGCCTTTTGATTTGTTA 60.016 34.615 0.00 0.00 0.00 2.41
9144 11445 7.531857 TTTAATCCAAGATACAAGCAACCAA 57.468 32.000 0.00 0.00 0.00 3.67
9158 11459 6.983890 ACAAGCAACCAATGTTTAGGTAAAAG 59.016 34.615 0.00 0.00 37.07 2.27
9447 11771 4.991687 GGCAAGTCTACTGATAATACAGGC 59.008 45.833 0.00 0.00 41.59 4.85
9554 11881 5.391523 CCCAAATGAATGTTTACACGATCGT 60.392 40.000 16.60 16.60 0.00 3.73
9694 12021 2.431057 AGTGGACGTGTTTCTCTTGAGT 59.569 45.455 0.00 0.00 0.00 3.41
9701 12028 3.871594 CGTGTTTCTCTTGAGTTGGAAGT 59.128 43.478 0.00 0.00 0.00 3.01
9738 12065 0.534203 GCAAGGAAGTGACGGAACCA 60.534 55.000 0.00 0.00 0.00 3.67
9740 12067 1.806542 CAAGGAAGTGACGGAACCATG 59.193 52.381 0.00 0.00 0.00 3.66
9770 12098 1.197036 GGCTGTCTCGGCTTGTTTTAC 59.803 52.381 0.66 0.00 35.82 2.01
9774 12102 4.556699 GCTGTCTCGGCTTGTTTTACAAAT 60.557 41.667 0.00 0.00 37.69 2.32
9775 12103 5.103290 TGTCTCGGCTTGTTTTACAAATC 57.897 39.130 0.00 0.00 37.69 2.17
9776 12104 4.148891 GTCTCGGCTTGTTTTACAAATCG 58.851 43.478 0.00 0.00 37.69 3.34
9779 12107 4.922719 TCGGCTTGTTTTACAAATCGTTT 58.077 34.783 11.24 0.00 37.69 3.60
9780 12108 4.735822 TCGGCTTGTTTTACAAATCGTTTG 59.264 37.500 8.35 8.35 45.95 2.93
9789 12117 1.673760 CAAATCGTTTGTGCTGTCGG 58.326 50.000 3.29 0.00 35.94 4.79
9790 12118 0.040425 AAATCGTTTGTGCTGTCGGC 60.040 50.000 0.00 0.00 42.22 5.54
9830 12158 1.604278 GATAATGCCAGTTTCTCCGGC 59.396 52.381 0.00 0.00 46.43 6.13
9833 12161 3.267974 GCCAGTTTCTCCGGCAAG 58.732 61.111 0.00 0.00 45.52 4.01
9834 12162 2.335712 GCCAGTTTCTCCGGCAAGG 61.336 63.158 0.00 0.00 45.52 3.61
9835 12163 2.335712 CCAGTTTCTCCGGCAAGGC 61.336 63.158 0.00 0.00 40.77 4.35
9836 12164 2.034221 AGTTTCTCCGGCAAGGCC 59.966 61.111 0.00 0.00 46.75 5.19
9845 12173 3.134127 GGCAAGGCCGCTAGGTTG 61.134 66.667 0.00 0.00 39.62 3.77
9846 12174 2.359975 GCAAGGCCGCTAGGTTGT 60.360 61.111 0.00 0.00 40.50 3.32
9847 12175 2.399356 GCAAGGCCGCTAGGTTGTC 61.399 63.158 0.00 0.00 40.50 3.18
9848 12176 2.100631 CAAGGCCGCTAGGTTGTCG 61.101 63.158 0.00 0.00 40.50 4.35
9849 12177 3.310860 AAGGCCGCTAGGTTGTCGG 62.311 63.158 0.00 1.76 45.46 4.79
9852 12180 2.509336 CCGCTAGGTTGTCGGCTG 60.509 66.667 0.00 0.00 36.53 4.85
9853 12181 2.509336 CGCTAGGTTGTCGGCTGG 60.509 66.667 0.00 0.00 0.00 4.85
9854 12182 2.820037 GCTAGGTTGTCGGCTGGC 60.820 66.667 0.00 0.00 0.00 4.85
9855 12183 2.509336 CTAGGTTGTCGGCTGGCG 60.509 66.667 18.26 18.26 0.00 5.69
9856 12184 3.296709 CTAGGTTGTCGGCTGGCGT 62.297 63.158 23.07 5.45 0.00 5.68
9857 12185 2.781595 CTAGGTTGTCGGCTGGCGTT 62.782 60.000 23.07 6.20 0.00 4.84
9858 12186 4.025401 GGTTGTCGGCTGGCGTTG 62.025 66.667 23.07 0.00 0.00 4.10
9859 12187 4.683334 GTTGTCGGCTGGCGTTGC 62.683 66.667 23.07 14.49 0.00 4.17
9865 12193 3.188786 GGCTGGCGTTGCGAGTAG 61.189 66.667 2.85 0.00 36.76 2.57
9866 12194 3.188786 GCTGGCGTTGCGAGTAGG 61.189 66.667 2.85 0.00 36.76 3.18
9867 12195 2.261671 CTGGCGTTGCGAGTAGGT 59.738 61.111 0.00 0.00 29.93 3.08
9868 12196 1.374252 CTGGCGTTGCGAGTAGGTT 60.374 57.895 0.00 0.00 29.93 3.50
9869 12197 1.352156 CTGGCGTTGCGAGTAGGTTC 61.352 60.000 0.00 0.00 29.93 3.62
9870 12198 2.442188 GGCGTTGCGAGTAGGTTCG 61.442 63.158 0.00 0.00 43.23 3.95
9871 12199 2.442188 GCGTTGCGAGTAGGTTCGG 61.442 63.158 0.00 0.00 40.79 4.30
9872 12200 1.080974 CGTTGCGAGTAGGTTCGGT 60.081 57.895 0.00 0.00 40.79 4.69
9873 12201 0.665369 CGTTGCGAGTAGGTTCGGTT 60.665 55.000 0.00 0.00 40.79 4.44
9874 12202 1.066136 GTTGCGAGTAGGTTCGGTTC 58.934 55.000 0.00 0.00 40.79 3.62
9875 12203 0.387622 TTGCGAGTAGGTTCGGTTCG 60.388 55.000 0.00 0.00 40.79 3.95
9876 12204 1.236616 TGCGAGTAGGTTCGGTTCGA 61.237 55.000 0.00 0.00 40.79 3.71
9877 12205 0.796113 GCGAGTAGGTTCGGTTCGAC 60.796 60.000 0.00 0.00 40.79 4.20
9878 12206 0.179179 CGAGTAGGTTCGGTTCGACC 60.179 60.000 0.00 0.00 34.89 4.79
9887 12215 2.279918 GGTTCGACCGCACACAGT 60.280 61.111 0.00 0.00 0.00 3.55
9888 12216 1.885850 GGTTCGACCGCACACAGTT 60.886 57.895 0.00 0.00 0.00 3.16
9889 12217 1.563173 GTTCGACCGCACACAGTTC 59.437 57.895 0.00 0.00 0.00 3.01
9890 12218 1.142097 TTCGACCGCACACAGTTCA 59.858 52.632 0.00 0.00 0.00 3.18
9891 12219 0.874175 TTCGACCGCACACAGTTCAG 60.874 55.000 0.00 0.00 0.00 3.02
9892 12220 2.939022 GACCGCACACAGTTCAGC 59.061 61.111 0.00 0.00 0.00 4.26
9893 12221 1.595382 GACCGCACACAGTTCAGCT 60.595 57.895 0.00 0.00 0.00 4.24
9908 12236 7.171447 CAGTTCAGCTGCAAGTATATAGAAC 57.829 40.000 9.47 3.60 38.52 3.01
9909 12237 5.980116 AGTTCAGCTGCAAGTATATAGAACG 59.020 40.000 9.47 0.00 38.21 3.95
9910 12238 5.515797 TCAGCTGCAAGTATATAGAACGT 57.484 39.130 9.47 0.00 35.30 3.99
9911 12239 5.520632 TCAGCTGCAAGTATATAGAACGTC 58.479 41.667 9.47 0.00 35.30 4.34
9912 12240 5.299531 TCAGCTGCAAGTATATAGAACGTCT 59.700 40.000 9.47 0.00 35.30 4.18
9913 12241 5.400782 CAGCTGCAAGTATATAGAACGTCTG 59.599 44.000 0.00 0.00 35.30 3.51
9914 12242 5.299531 AGCTGCAAGTATATAGAACGTCTGA 59.700 40.000 1.02 0.00 35.30 3.27
9915 12243 5.399892 GCTGCAAGTATATAGAACGTCTGAC 59.600 44.000 0.00 0.00 35.30 3.51
9916 12244 7.745018 GCTGCAAGTATATAGAACGTCTGACG 61.745 46.154 26.94 26.94 41.98 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.070275 GTCCCAACCCGACGTTTCT 59.930 57.895 0.00 0.00 29.93 2.52
1 2 0.533531 AAGTCCCAACCCGACGTTTC 60.534 55.000 0.00 0.00 35.33 2.78
2 3 0.107066 AAAGTCCCAACCCGACGTTT 60.107 50.000 0.00 0.00 35.33 3.60
3 4 0.816421 CAAAGTCCCAACCCGACGTT 60.816 55.000 0.00 0.00 35.33 3.99
4 5 1.227734 CAAAGTCCCAACCCGACGT 60.228 57.895 0.00 0.00 35.33 4.34
5 6 0.533308 TTCAAAGTCCCAACCCGACG 60.533 55.000 0.00 0.00 35.33 5.12
6 7 1.202722 TCTTCAAAGTCCCAACCCGAC 60.203 52.381 0.00 0.00 0.00 4.79
7 8 1.133363 TCTTCAAAGTCCCAACCCGA 58.867 50.000 0.00 0.00 0.00 5.14
8 9 1.235724 GTCTTCAAAGTCCCAACCCG 58.764 55.000 0.00 0.00 0.00 5.28
9 10 1.202722 TCGTCTTCAAAGTCCCAACCC 60.203 52.381 0.00 0.00 0.00 4.11
10 11 2.143925 CTCGTCTTCAAAGTCCCAACC 58.856 52.381 0.00 0.00 0.00 3.77
11 12 1.531578 GCTCGTCTTCAAAGTCCCAAC 59.468 52.381 0.00 0.00 0.00 3.77
12 13 1.140052 TGCTCGTCTTCAAAGTCCCAA 59.860 47.619 0.00 0.00 0.00 4.12
13 14 0.756294 TGCTCGTCTTCAAAGTCCCA 59.244 50.000 0.00 0.00 0.00 4.37
14 15 1.433534 CTGCTCGTCTTCAAAGTCCC 58.566 55.000 0.00 0.00 0.00 4.46
15 16 0.793250 GCTGCTCGTCTTCAAAGTCC 59.207 55.000 0.00 0.00 0.00 3.85
16 17 1.789506 AGCTGCTCGTCTTCAAAGTC 58.210 50.000 0.00 0.00 0.00 3.01
17 18 1.869767 CAAGCTGCTCGTCTTCAAAGT 59.130 47.619 1.00 0.00 0.00 2.66
18 19 1.399471 GCAAGCTGCTCGTCTTCAAAG 60.399 52.381 1.00 0.00 40.96 2.77
19 20 0.588252 GCAAGCTGCTCGTCTTCAAA 59.412 50.000 1.00 0.00 40.96 2.69
20 21 2.238353 GCAAGCTGCTCGTCTTCAA 58.762 52.632 1.00 0.00 40.96 2.69
21 22 3.957260 GCAAGCTGCTCGTCTTCA 58.043 55.556 1.00 0.00 40.96 3.02
37 38 0.458716 GTCTGAAGGTAGGCGTCAGC 60.459 60.000 0.00 0.00 44.18 4.26
38 39 0.179161 CGTCTGAAGGTAGGCGTCAG 60.179 60.000 0.00 0.00 40.67 3.51
39 40 1.880894 CGTCTGAAGGTAGGCGTCA 59.119 57.895 0.00 0.00 40.67 4.35
40 41 4.787999 CGTCTGAAGGTAGGCGTC 57.212 61.111 0.00 0.00 40.67 5.19
43 44 1.139095 CCGACGTCTGAAGGTAGGC 59.861 63.158 14.70 0.00 30.90 3.93
44 45 0.733729 CTCCGACGTCTGAAGGTAGG 59.266 60.000 14.70 4.73 37.38 3.18
45 46 0.733729 CCTCCGACGTCTGAAGGTAG 59.266 60.000 14.70 6.80 0.00 3.18
46 47 0.325933 TCCTCCGACGTCTGAAGGTA 59.674 55.000 20.46 9.93 0.00 3.08
47 48 0.961358 CTCCTCCGACGTCTGAAGGT 60.961 60.000 20.46 0.00 0.00 3.50
48 49 1.658686 CCTCCTCCGACGTCTGAAGG 61.659 65.000 14.70 16.17 0.00 3.46
49 50 0.677098 TCCTCCTCCGACGTCTGAAG 60.677 60.000 14.70 6.62 0.00 3.02
50 51 0.959372 GTCCTCCTCCGACGTCTGAA 60.959 60.000 14.70 0.00 0.00 3.02
51 52 1.376942 GTCCTCCTCCGACGTCTGA 60.377 63.158 14.70 11.91 0.00 3.27
52 53 1.032657 ATGTCCTCCTCCGACGTCTG 61.033 60.000 14.70 7.40 32.68 3.51
53 54 0.323542 AATGTCCTCCTCCGACGTCT 60.324 55.000 14.70 0.00 32.68 4.18
54 55 1.065251 GTAATGTCCTCCTCCGACGTC 59.935 57.143 5.18 5.18 32.68 4.34
55 56 1.101331 GTAATGTCCTCCTCCGACGT 58.899 55.000 0.00 0.00 32.68 4.34
56 57 0.384669 GGTAATGTCCTCCTCCGACG 59.615 60.000 0.00 0.00 32.68 5.12
57 58 0.384669 CGGTAATGTCCTCCTCCGAC 59.615 60.000 0.00 0.00 40.29 4.79
58 59 0.256752 TCGGTAATGTCCTCCTCCGA 59.743 55.000 0.00 0.00 43.52 4.55
59 60 0.669077 CTCGGTAATGTCCTCCTCCG 59.331 60.000 0.00 0.00 39.40 4.63
60 61 1.682323 GACTCGGTAATGTCCTCCTCC 59.318 57.143 0.00 0.00 0.00 4.30
61 62 1.334243 CGACTCGGTAATGTCCTCCTC 59.666 57.143 0.00 0.00 0.00 3.71
62 63 1.390565 CGACTCGGTAATGTCCTCCT 58.609 55.000 0.00 0.00 0.00 3.69
63 64 0.384669 CCGACTCGGTAATGTCCTCC 59.615 60.000 9.51 0.00 42.73 4.30
64 65 3.940723 CCGACTCGGTAATGTCCTC 57.059 57.895 9.51 0.00 42.73 3.71
75 76 1.129998 TCGCTTTCTAACTCCGACTCG 59.870 52.381 0.00 0.00 0.00 4.18
76 77 2.517935 GTCGCTTTCTAACTCCGACTC 58.482 52.381 4.46 0.00 43.36 3.36
77 78 1.135746 CGTCGCTTTCTAACTCCGACT 60.136 52.381 9.35 0.00 44.20 4.18
78 79 1.135859 TCGTCGCTTTCTAACTCCGAC 60.136 52.381 0.00 0.00 43.29 4.79
79 80 1.135859 GTCGTCGCTTTCTAACTCCGA 60.136 52.381 0.00 0.00 0.00 4.55
80 81 1.135746 AGTCGTCGCTTTCTAACTCCG 60.136 52.381 0.00 0.00 0.00 4.63
81 82 2.633199 AGTCGTCGCTTTCTAACTCC 57.367 50.000 0.00 0.00 0.00 3.85
82 83 4.090034 CACTAGTCGTCGCTTTCTAACTC 58.910 47.826 0.00 0.00 0.00 3.01
83 84 3.119919 CCACTAGTCGTCGCTTTCTAACT 60.120 47.826 0.00 0.00 0.00 2.24
84 85 3.169733 CCACTAGTCGTCGCTTTCTAAC 58.830 50.000 0.00 0.00 0.00 2.34
85 86 2.816087 ACCACTAGTCGTCGCTTTCTAA 59.184 45.455 0.00 0.00 0.00 2.10
86 87 2.417933 GACCACTAGTCGTCGCTTTCTA 59.582 50.000 4.82 0.00 35.30 2.10
87 88 1.199558 GACCACTAGTCGTCGCTTTCT 59.800 52.381 4.82 0.00 35.30 2.52
88 89 1.615502 GACCACTAGTCGTCGCTTTC 58.384 55.000 4.82 0.00 35.30 2.62
89 90 3.788775 GACCACTAGTCGTCGCTTT 57.211 52.632 4.82 0.00 35.30 3.51
117 118 9.527157 ACATAGATAGTTCTAGCATACACAGAT 57.473 33.333 0.00 0.00 37.86 2.90
118 119 8.926092 ACATAGATAGTTCTAGCATACACAGA 57.074 34.615 0.00 0.00 37.86 3.41
122 123 9.975218 TGGATACATAGATAGTTCTAGCATACA 57.025 33.333 0.00 0.00 46.17 2.29
175 176 2.767697 GTTTGCTACGTCGCCGAC 59.232 61.111 7.29 7.29 37.88 4.79
176 177 2.801996 CGTTTGCTACGTCGCCGA 60.802 61.111 9.82 0.00 45.14 5.54
184 185 2.818274 CCCTCGCCCGTTTGCTAC 60.818 66.667 0.00 0.00 0.00 3.58
185 186 3.315949 ACCCTCGCCCGTTTGCTA 61.316 61.111 0.00 0.00 0.00 3.49
188 189 3.353836 CACACCCTCGCCCGTTTG 61.354 66.667 0.00 0.00 0.00 2.93
189 190 2.406002 ATTCACACCCTCGCCCGTTT 62.406 55.000 0.00 0.00 0.00 3.60
190 191 2.798148 GATTCACACCCTCGCCCGTT 62.798 60.000 0.00 0.00 0.00 4.44
191 192 3.310860 GATTCACACCCTCGCCCGT 62.311 63.158 0.00 0.00 0.00 5.28
192 193 2.511600 GATTCACACCCTCGCCCG 60.512 66.667 0.00 0.00 0.00 6.13
193 194 2.124695 GGATTCACACCCTCGCCC 60.125 66.667 0.00 0.00 0.00 6.13
194 195 1.745489 GTGGATTCACACCCTCGCC 60.745 63.158 0.00 0.00 43.13 5.54
195 196 1.021390 CAGTGGATTCACACCCTCGC 61.021 60.000 6.96 0.00 45.91 5.03
196 197 0.321671 ACAGTGGATTCACACCCTCG 59.678 55.000 6.96 0.00 45.91 4.63
197 198 1.813513 CACAGTGGATTCACACCCTC 58.186 55.000 6.96 0.00 45.91 4.30
198 199 0.250901 GCACAGTGGATTCACACCCT 60.251 55.000 6.96 0.00 45.91 4.34
199 200 1.244019 GGCACAGTGGATTCACACCC 61.244 60.000 6.96 0.00 45.91 4.61
200 201 0.537143 TGGCACAGTGGATTCACACC 60.537 55.000 6.96 2.83 45.91 4.16
201 202 0.593128 GTGGCACAGTGGATTCACAC 59.407 55.000 13.86 0.00 45.91 3.82
202 203 0.537143 GGTGGCACAGTGGATTCACA 60.537 55.000 20.82 0.00 45.91 3.58
203 204 1.577328 CGGTGGCACAGTGGATTCAC 61.577 60.000 20.82 0.00 41.80 3.18
204 205 1.302431 CGGTGGCACAGTGGATTCA 60.302 57.895 20.82 0.00 41.80 2.57
205 206 1.003839 TCGGTGGCACAGTGGATTC 60.004 57.895 20.82 0.00 41.80 2.52
206 207 1.302511 GTCGGTGGCACAGTGGATT 60.303 57.895 20.82 0.00 41.80 3.01
207 208 2.347490 GTCGGTGGCACAGTGGAT 59.653 61.111 20.82 0.00 41.80 3.41
208 209 3.936203 GGTCGGTGGCACAGTGGA 61.936 66.667 20.82 7.84 41.80 4.02
209 210 4.248842 TGGTCGGTGGCACAGTGG 62.249 66.667 20.82 5.45 41.80 4.00
210 211 2.666190 CTGGTCGGTGGCACAGTG 60.666 66.667 20.82 8.68 41.80 3.66
211 212 4.626081 GCTGGTCGGTGGCACAGT 62.626 66.667 20.82 0.00 41.80 3.55
228 229 4.778143 CTTTCCTCACCGGGCCCG 62.778 72.222 37.99 37.99 39.44 6.13
229 230 2.680370 ATCTTTCCTCACCGGGCCC 61.680 63.158 13.57 13.57 0.00 5.80
230 231 1.452108 CATCTTTCCTCACCGGGCC 60.452 63.158 6.32 0.00 0.00 5.80
231 232 1.452108 CCATCTTTCCTCACCGGGC 60.452 63.158 6.32 0.00 0.00 6.13
232 233 1.452108 GCCATCTTTCCTCACCGGG 60.452 63.158 6.32 0.00 0.00 5.73
233 234 1.815421 CGCCATCTTTCCTCACCGG 60.815 63.158 0.00 0.00 0.00 5.28
234 235 0.807667 CTCGCCATCTTTCCTCACCG 60.808 60.000 0.00 0.00 0.00 4.94
235 236 1.092345 GCTCGCCATCTTTCCTCACC 61.092 60.000 0.00 0.00 0.00 4.02
236 237 1.424493 CGCTCGCCATCTTTCCTCAC 61.424 60.000 0.00 0.00 0.00 3.51
237 238 1.153568 CGCTCGCCATCTTTCCTCA 60.154 57.895 0.00 0.00 0.00 3.86
238 239 2.529619 GCGCTCGCCATCTTTCCTC 61.530 63.158 0.00 0.00 34.56 3.71
239 240 2.512515 GCGCTCGCCATCTTTCCT 60.513 61.111 0.00 0.00 34.56 3.36
240 241 3.929948 CGCGCTCGCCATCTTTCC 61.930 66.667 5.56 0.00 37.98 3.13
259 260 3.764049 GACACAAGACGGACGCGC 61.764 66.667 5.73 0.00 0.00 6.86
260 261 3.103911 GGACACAAGACGGACGCG 61.104 66.667 3.53 3.53 0.00 6.01
261 262 3.103911 CGGACACAAGACGGACGC 61.104 66.667 0.00 0.00 0.00 5.19
262 263 3.103911 GCGGACACAAGACGGACG 61.104 66.667 0.00 0.00 0.00 4.79
263 264 3.103911 CGCGGACACAAGACGGAC 61.104 66.667 0.00 0.00 0.00 4.79
279 280 4.520846 GCCTGATTTGCGTCGGCG 62.521 66.667 4.29 4.29 44.10 6.46
280 281 3.100862 GAGCCTGATTTGCGTCGGC 62.101 63.158 0.00 0.00 37.76 5.54
281 282 1.298157 TTGAGCCTGATTTGCGTCGG 61.298 55.000 0.00 0.00 0.00 4.79
282 283 0.516877 TTTGAGCCTGATTTGCGTCG 59.483 50.000 0.00 0.00 0.00 5.12
283 284 2.704725 TTTTGAGCCTGATTTGCGTC 57.295 45.000 0.00 0.00 0.00 5.19
284 285 3.319755 CATTTTTGAGCCTGATTTGCGT 58.680 40.909 0.00 0.00 0.00 5.24
285 286 2.669434 CCATTTTTGAGCCTGATTTGCG 59.331 45.455 0.00 0.00 0.00 4.85
286 287 3.004862 CCCATTTTTGAGCCTGATTTGC 58.995 45.455 0.00 0.00 0.00 3.68
287 288 3.004862 GCCCATTTTTGAGCCTGATTTG 58.995 45.455 0.00 0.00 0.00 2.32
288 289 2.026915 GGCCCATTTTTGAGCCTGATTT 60.027 45.455 0.00 0.00 42.34 2.17
289 290 1.556451 GGCCCATTTTTGAGCCTGATT 59.444 47.619 0.00 0.00 42.34 2.57
290 291 1.197812 GGCCCATTTTTGAGCCTGAT 58.802 50.000 0.00 0.00 42.34 2.90
291 292 0.178938 TGGCCCATTTTTGAGCCTGA 60.179 50.000 0.00 0.00 45.94 3.86
292 293 0.248289 CTGGCCCATTTTTGAGCCTG 59.752 55.000 0.00 0.00 45.94 4.85
293 294 0.906282 CCTGGCCCATTTTTGAGCCT 60.906 55.000 0.00 0.00 45.94 4.58
294 295 0.904394 TCCTGGCCCATTTTTGAGCC 60.904 55.000 0.00 0.00 45.96 4.70
295 296 0.975887 TTCCTGGCCCATTTTTGAGC 59.024 50.000 0.00 0.00 0.00 4.26
296 297 2.093341 CCATTCCTGGCCCATTTTTGAG 60.093 50.000 0.00 0.00 35.23 3.02
297 298 1.907936 CCATTCCTGGCCCATTTTTGA 59.092 47.619 0.00 0.00 35.23 2.69
298 299 1.065272 CCCATTCCTGGCCCATTTTTG 60.065 52.381 0.00 0.00 41.64 2.44
299 300 1.288188 CCCATTCCTGGCCCATTTTT 58.712 50.000 0.00 0.00 41.64 1.94
300 301 0.118952 ACCCATTCCTGGCCCATTTT 59.881 50.000 0.00 0.00 41.64 1.82
301 302 0.325577 GACCCATTCCTGGCCCATTT 60.326 55.000 0.00 0.00 41.64 2.32
302 303 1.311059 GACCCATTCCTGGCCCATT 59.689 57.895 0.00 0.00 41.64 3.16
303 304 3.018901 GACCCATTCCTGGCCCAT 58.981 61.111 0.00 0.00 41.64 4.00
304 305 3.727258 CGACCCATTCCTGGCCCA 61.727 66.667 0.00 0.00 41.64 5.36
305 306 4.506255 CCGACCCATTCCTGGCCC 62.506 72.222 0.00 0.00 41.64 5.80
307 308 4.424711 TGCCGACCCATTCCTGGC 62.425 66.667 0.00 0.00 45.91 4.85
308 309 2.124570 CTGCCGACCCATTCCTGG 60.125 66.667 0.00 0.00 42.73 4.45
309 310 2.124570 CCTGCCGACCCATTCCTG 60.125 66.667 0.00 0.00 0.00 3.86
310 311 4.115199 GCCTGCCGACCCATTCCT 62.115 66.667 0.00 0.00 0.00 3.36
319 320 4.735132 CTTTCGTCCGCCTGCCGA 62.735 66.667 0.00 0.00 40.02 5.54
323 324 4.735132 TCCGCTTTCGTCCGCCTG 62.735 66.667 0.00 0.00 0.00 4.85
324 325 4.736896 GTCCGCTTTCGTCCGCCT 62.737 66.667 0.00 0.00 0.00 5.52
339 340 4.160635 CCCAAATGGACGCGCGTC 62.161 66.667 45.60 45.60 43.87 5.19
341 342 4.160635 GACCCAAATGGACGCGCG 62.161 66.667 30.96 30.96 37.39 6.86
342 343 4.160635 CGACCCAAATGGACGCGC 62.161 66.667 5.73 0.00 44.79 6.86
346 347 2.736682 CGCGTCGACCCAAATGGAC 61.737 63.158 10.58 0.00 37.39 4.02
347 348 2.433491 CGCGTCGACCCAAATGGA 60.433 61.111 10.58 0.00 37.39 3.41
348 349 2.322081 AACGCGTCGACCCAAATGG 61.322 57.895 14.44 0.00 41.37 3.16
349 350 1.154488 CAACGCGTCGACCCAAATG 60.154 57.895 14.44 0.00 0.00 2.32
350 351 2.322081 CCAACGCGTCGACCCAAAT 61.322 57.895 14.44 0.00 0.00 2.32
351 352 2.968156 CCAACGCGTCGACCCAAA 60.968 61.111 14.44 0.00 0.00 3.28
352 353 3.914117 TCCAACGCGTCGACCCAA 61.914 61.111 14.44 0.00 0.00 4.12
353 354 4.651008 GTCCAACGCGTCGACCCA 62.651 66.667 22.33 0.00 0.00 4.51
360 361 4.922026 AAAGCCGGTCCAACGCGT 62.922 61.111 5.58 5.58 0.00 6.01
361 362 3.189010 AAAAAGCCGGTCCAACGCG 62.189 57.895 3.53 3.53 0.00 6.01
362 363 2.725641 AAAAAGCCGGTCCAACGC 59.274 55.556 1.90 0.00 0.00 4.84
376 377 2.246042 GGGTCGACGCGGACAAAAA 61.246 57.895 17.36 0.00 38.70 1.94
377 378 2.662527 GGGTCGACGCGGACAAAA 60.663 61.111 17.36 0.00 38.70 2.44
378 379 2.919960 TTTGGGTCGACGCGGACAAA 62.920 55.000 25.18 17.38 38.70 2.83
379 380 3.442512 TTTGGGTCGACGCGGACAA 62.443 57.895 25.18 12.71 38.70 3.18
380 381 3.914117 TTTGGGTCGACGCGGACA 61.914 61.111 25.18 7.18 38.70 4.02
381 382 3.408851 GTTTGGGTCGACGCGGAC 61.409 66.667 25.18 21.13 36.18 4.79
385 386 3.408851 GTCCGTTTGGGTCGACGC 61.409 66.667 24.41 24.41 37.91 5.19
419 420 3.714487 TTAGAGCAATGGGGCGGCC 62.714 63.158 22.00 22.00 39.27 6.13
420 421 1.728490 CTTTAGAGCAATGGGGCGGC 61.728 60.000 0.00 0.00 39.27 6.53
421 422 0.107214 TCTTTAGAGCAATGGGGCGG 60.107 55.000 0.00 0.00 39.27 6.13
422 423 1.134401 TCTCTTTAGAGCAATGGGGCG 60.134 52.381 1.79 0.00 41.80 6.13
423 424 2.717639 TCTCTTTAGAGCAATGGGGC 57.282 50.000 1.79 0.00 41.80 5.80
424 425 5.982890 TTTTTCTCTTTAGAGCAATGGGG 57.017 39.130 1.79 0.00 41.80 4.96
425 426 7.605449 TGAATTTTTCTCTTTAGAGCAATGGG 58.395 34.615 1.79 0.00 41.80 4.00
426 427 8.919661 GTTGAATTTTTCTCTTTAGAGCAATGG 58.080 33.333 1.79 0.00 41.80 3.16
427 428 9.688592 AGTTGAATTTTTCTCTTTAGAGCAATG 57.311 29.630 1.79 0.00 41.80 2.82
428 429 9.688592 CAGTTGAATTTTTCTCTTTAGAGCAAT 57.311 29.630 1.79 0.00 41.80 3.56
429 430 8.686334 ACAGTTGAATTTTTCTCTTTAGAGCAA 58.314 29.630 1.79 0.00 41.80 3.91
430 431 8.131100 CACAGTTGAATTTTTCTCTTTAGAGCA 58.869 33.333 1.79 0.00 41.80 4.26
431 432 8.345565 TCACAGTTGAATTTTTCTCTTTAGAGC 58.654 33.333 1.79 0.00 41.80 4.09
452 453 4.318332 TCCAAAGCTGACACTATTCACAG 58.682 43.478 0.00 0.00 0.00 3.66
458 459 6.765036 CACTATTCATCCAAAGCTGACACTAT 59.235 38.462 0.00 0.00 0.00 2.12
517 518 9.803315 CAGCTACTAATTCAATCTACACTTGTA 57.197 33.333 0.00 0.00 0.00 2.41
518 519 8.531982 TCAGCTACTAATTCAATCTACACTTGT 58.468 33.333 0.00 0.00 0.00 3.16
519 520 8.932945 TCAGCTACTAATTCAATCTACACTTG 57.067 34.615 0.00 0.00 0.00 3.16
520 521 9.944376 TTTCAGCTACTAATTCAATCTACACTT 57.056 29.630 0.00 0.00 0.00 3.16
521 522 9.372369 GTTTCAGCTACTAATTCAATCTACACT 57.628 33.333 0.00 0.00 0.00 3.55
522 523 9.372369 AGTTTCAGCTACTAATTCAATCTACAC 57.628 33.333 0.00 0.00 0.00 2.90
523 524 9.944376 AAGTTTCAGCTACTAATTCAATCTACA 57.056 29.630 0.00 0.00 0.00 2.74
552 553 7.483119 CGTCAATGTTTGATGTACAATCTTG 57.517 36.000 0.00 0.00 42.47 3.02
648 650 3.760580 GCATAGGATCTGCTTGTAGGT 57.239 47.619 0.00 0.00 36.68 3.08
680 715 2.278206 CTCGTGGCCGTCTGATCG 60.278 66.667 0.00 0.00 35.01 3.69
714 749 5.962423 GCTTTTAGTCTCTTTTCATCGATGC 59.038 40.000 20.81 3.96 0.00 3.91
721 756 5.063880 GGTCCAGCTTTTAGTCTCTTTTCA 58.936 41.667 0.00 0.00 0.00 2.69
765 800 2.435938 GGTCTGCCGCCGATGAAA 60.436 61.111 0.00 0.00 0.00 2.69
809 844 1.133294 GGTTGGAGTGGGGGAAGAAAA 60.133 52.381 0.00 0.00 0.00 2.29
1165 1206 1.468914 GAAACTTCGCCCCAAAGCTAG 59.531 52.381 0.00 0.00 0.00 3.42
1219 1260 2.676471 GATTGGCCCACGCAGGTT 60.676 61.111 0.00 0.00 36.38 3.50
1262 1306 0.825010 AACAGGAAACAGCAGCCCAG 60.825 55.000 0.00 0.00 0.00 4.45
1264 1308 1.662044 CAACAGGAAACAGCAGCCC 59.338 57.895 0.00 0.00 0.00 5.19
1267 1311 2.806608 AATGCAACAGGAAACAGCAG 57.193 45.000 0.00 0.00 38.75 4.24
1268 1312 2.224018 GGAAATGCAACAGGAAACAGCA 60.224 45.455 0.00 0.00 39.79 4.41
1271 1315 1.691434 GGGGAAATGCAACAGGAAACA 59.309 47.619 0.00 0.00 0.00 2.83
1272 1316 1.336795 CGGGGAAATGCAACAGGAAAC 60.337 52.381 0.00 0.00 0.00 2.78
1273 1317 0.965439 CGGGGAAATGCAACAGGAAA 59.035 50.000 0.00 0.00 0.00 3.13
1274 1318 0.897863 CCGGGGAAATGCAACAGGAA 60.898 55.000 0.00 0.00 0.00 3.36
1277 1321 2.573340 GCCGGGGAAATGCAACAG 59.427 61.111 2.18 0.00 0.00 3.16
1289 1333 3.659089 ATCGAGAAACACCGCCGGG 62.659 63.158 8.57 0.00 40.11 5.73
1319 1363 2.747446 CCACGTTCATAAACCCTTCCAG 59.253 50.000 0.00 0.00 31.27 3.86
1376 1440 2.948979 CAAAAGGCTACCATAATCCGCA 59.051 45.455 0.00 0.00 0.00 5.69
1397 1461 4.887655 AGACCCCGAACAAATAATTGATCC 59.112 41.667 0.00 0.00 38.94 3.36
1409 1473 1.155390 AGAGACCAGACCCCGAACA 59.845 57.895 0.00 0.00 0.00 3.18
1432 1496 1.003116 GTCGAGCTATTGGCAGCATTG 60.003 52.381 0.00 0.00 44.35 2.82
1454 1518 2.155279 CGTCACTCTCAGACTCCAAGA 58.845 52.381 0.00 0.00 33.89 3.02
1478 1542 3.547413 CCGATACATGCATCAACAAGCAG 60.547 47.826 6.73 0.00 44.94 4.24
1491 1555 0.859232 GGCTACGCAACCGATACATG 59.141 55.000 0.00 0.00 38.29 3.21
1555 1619 4.220602 GCATCTACCCACTGAACCAAAAAT 59.779 41.667 0.00 0.00 0.00 1.82
1566 1631 1.115467 CCGAGAAGCATCTACCCACT 58.885 55.000 0.00 0.00 35.54 4.00
1605 1670 1.906105 TACTGGCGTCCCCCAATGTC 61.906 60.000 0.00 0.00 33.73 3.06
1652 1721 8.879759 TCTTTTGCCTACATTCTAAATAACTCG 58.120 33.333 0.00 0.00 0.00 4.18
1673 1742 7.234577 TGCATTAGGAGGGTTGTTAATTCTTTT 59.765 33.333 0.00 0.00 0.00 2.27
1740 1809 1.452651 CCACTAGCCACAGCCCATG 60.453 63.158 0.00 0.00 41.25 3.66
1822 1891 5.919348 ATGACCTCCCAAACTCATATCAT 57.081 39.130 0.00 0.00 0.00 2.45
2010 2110 8.685427 ACTGCTAATGTGATTAAAACATGCATA 58.315 29.630 14.62 0.00 36.76 3.14
2023 2123 9.836864 TGTTTATTCTATGACTGCTAATGTGAT 57.163 29.630 0.00 0.00 0.00 3.06
2073 2173 7.386025 CCAATGTCCTGGAAAAGAAGAAATTTC 59.614 37.037 10.33 10.33 38.96 2.17
2272 2372 2.668632 CGTGCCAAGGCTCCCTTA 59.331 61.111 12.96 0.00 42.67 2.69
2276 2376 4.043200 GTTGCGTGCCAAGGCTCC 62.043 66.667 12.96 2.11 42.51 4.70
2277 2377 4.389576 CGTTGCGTGCCAAGGCTC 62.390 66.667 12.96 7.88 42.51 4.70
2280 2380 1.787057 TTTACCGTTGCGTGCCAAGG 61.787 55.000 0.00 0.00 38.66 3.61
2281 2381 0.385473 CTTTACCGTTGCGTGCCAAG 60.385 55.000 0.00 0.00 33.21 3.61
2282 2382 1.649815 CTTTACCGTTGCGTGCCAA 59.350 52.632 0.00 0.00 0.00 4.52
2283 2383 2.899044 GCTTTACCGTTGCGTGCCA 61.899 57.895 0.00 0.00 0.00 4.92
2284 2384 2.127003 GCTTTACCGTTGCGTGCC 60.127 61.111 0.00 0.00 0.00 5.01
2285 2385 1.440353 CAGCTTTACCGTTGCGTGC 60.440 57.895 0.00 0.00 0.00 5.34
2286 2386 0.306533 AACAGCTTTACCGTTGCGTG 59.693 50.000 0.00 0.00 0.00 5.34
2287 2387 0.306533 CAACAGCTTTACCGTTGCGT 59.693 50.000 1.41 0.00 34.21 5.24
2288 2388 3.071495 CAACAGCTTTACCGTTGCG 57.929 52.632 1.41 0.00 34.21 4.85
2290 2390 0.951558 AGGCAACAGCTTTACCGTTG 59.048 50.000 9.00 9.00 42.29 4.10
2291 2391 1.687563 AAGGCAACAGCTTTACCGTT 58.312 45.000 0.00 0.00 41.41 4.44
2292 2392 2.148768 GTAAGGCAACAGCTTTACCGT 58.851 47.619 10.29 0.00 41.97 4.83
2293 2393 1.127951 CGTAAGGCAACAGCTTTACCG 59.872 52.381 14.21 7.86 43.73 4.02
2294 2394 2.159037 GTCGTAAGGCAACAGCTTTACC 59.841 50.000 14.21 1.54 43.73 2.85
2295 2395 3.450893 GTCGTAAGGCAACAGCTTTAC 57.549 47.619 11.11 11.11 45.31 2.01
2316 2416 0.458543 CTCGAACCCGTGACCTCATG 60.459 60.000 0.00 0.00 37.05 3.07
2317 2417 0.898789 ACTCGAACCCGTGACCTCAT 60.899 55.000 0.00 0.00 37.05 2.90
2318 2418 1.521450 GACTCGAACCCGTGACCTCA 61.521 60.000 0.00 0.00 37.05 3.86
2319 2419 1.212229 GACTCGAACCCGTGACCTC 59.788 63.158 0.00 0.00 37.05 3.85
2320 2420 2.273912 GGACTCGAACCCGTGACCT 61.274 63.158 0.00 0.00 39.62 3.85
2321 2421 2.260743 GGACTCGAACCCGTGACC 59.739 66.667 0.00 0.00 37.08 4.02
2322 2422 1.080705 CAGGACTCGAACCCGTGAC 60.081 63.158 4.92 0.00 37.05 3.67
2323 2423 2.273179 CCAGGACTCGAACCCGTGA 61.273 63.158 4.92 0.00 37.05 4.35
2324 2424 1.812686 TTCCAGGACTCGAACCCGTG 61.813 60.000 0.00 0.64 37.05 4.94
2325 2425 1.117142 TTTCCAGGACTCGAACCCGT 61.117 55.000 0.00 0.00 37.05 5.28
2326 2426 0.669625 GTTTCCAGGACTCGAACCCG 60.670 60.000 0.00 0.00 37.07 5.28
2327 2427 0.395312 TGTTTCCAGGACTCGAACCC 59.605 55.000 0.00 0.12 0.00 4.11
2328 2428 1.797025 CTGTTTCCAGGACTCGAACC 58.203 55.000 0.00 0.64 34.90 3.62
2329 2429 1.149148 GCTGTTTCCAGGACTCGAAC 58.851 55.000 0.00 0.00 39.22 3.95
2330 2430 0.034896 GGCTGTTTCCAGGACTCGAA 59.965 55.000 0.00 0.00 39.22 3.71
2331 2431 0.832135 AGGCTGTTTCCAGGACTCGA 60.832 55.000 0.00 0.00 39.22 4.04
2332 2432 0.390472 GAGGCTGTTTCCAGGACTCG 60.390 60.000 0.00 0.00 39.22 4.18
2333 2433 0.980423 AGAGGCTGTTTCCAGGACTC 59.020 55.000 0.00 0.00 39.22 3.36
2334 2434 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
2335 2435 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
2336 2436 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
2337 2437 0.538057 TGCAAGAGGCTGTTTCCAGG 60.538 55.000 0.00 0.00 45.15 4.45
2338 2438 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
2339 2439 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
2340 2440 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
2355 2455 1.203994 CAGCCTTTCCCTGCATTTCTG 59.796 52.381 0.00 0.00 0.00 3.02
2356 2456 1.553706 CAGCCTTTCCCTGCATTTCT 58.446 50.000 0.00 0.00 0.00 2.52
2363 2463 0.605319 TTGTACGCAGCCTTTCCCTG 60.605 55.000 0.00 0.00 0.00 4.45
2364 2464 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
2365 2465 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
2366 2466 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
2367 2467 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
2368 2468 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
2369 2469 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
2370 2470 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
2371 2471 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
2372 2472 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
2373 2473 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
2374 2474 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
2375 2475 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
2376 2476 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
2386 2486 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
2387 2487 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
2388 2488 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
2389 2489 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
2390 2490 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
2391 2491 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
2392 2492 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
2393 2493 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
2400 2500 4.735599 AGGGTCCGGGGAAGGGTC 62.736 72.222 0.00 0.00 0.00 4.46
2428 2528 3.512516 GCCCGGTGCATGAAGCTC 61.513 66.667 9.72 0.00 45.94 4.09
2429 2529 4.039092 AGCCCGGTGCATGAAGCT 62.039 61.111 15.92 4.82 45.94 3.74
2430 2530 3.818787 CAGCCCGGTGCATGAAGC 61.819 66.667 15.92 0.00 44.83 3.86
2431 2531 3.818787 GCAGCCCGGTGCATGAAG 61.819 66.667 13.70 0.91 43.41 3.02
2442 2542 0.106967 CTTCCTTCTAAGGGCAGCCC 60.107 60.000 24.90 24.90 46.47 5.19
2443 2543 0.749818 GCTTCCTTCTAAGGGCAGCC 60.750 60.000 16.99 1.26 46.47 4.85
2444 2544 0.254462 AGCTTCCTTCTAAGGGCAGC 59.746 55.000 18.87 18.87 46.47 5.25
2445 2545 2.797177 AAGCTTCCTTCTAAGGGCAG 57.203 50.000 8.87 6.69 46.47 4.85
2446 2546 3.587506 ACTTAAGCTTCCTTCTAAGGGCA 59.412 43.478 0.00 0.00 46.47 5.36
2447 2547 4.223556 ACTTAAGCTTCCTTCTAAGGGC 57.776 45.455 0.00 5.53 46.47 5.19
2478 2578 6.535150 CAGTAAAAATCAAGGATACAGCGAGA 59.465 38.462 0.00 0.00 41.41 4.04
2715 2815 6.238648 CGGTCAACAAAGAAGTACAGGAAATT 60.239 38.462 0.00 0.00 0.00 1.82
2716 2816 5.238650 CGGTCAACAAAGAAGTACAGGAAAT 59.761 40.000 0.00 0.00 0.00 2.17
2739 2839 7.193595 AGGTTGTCACAAAAAGTTAAATCTCG 58.806 34.615 0.00 0.00 0.00 4.04
2757 2857 4.911514 TTGCTTTCCACTTAAGGTTGTC 57.088 40.909 7.53 0.00 0.00 3.18
2877 2977 5.545723 AGTCCAAGGATATACCATTGGAGAG 59.454 44.000 13.62 0.00 46.27 3.20
2879 2979 5.513788 CCAGTCCAAGGATATACCATTGGAG 60.514 48.000 13.62 3.34 46.27 3.86
3368 3479 5.523369 AGCTTTGTCAAACTTAGATGCAAC 58.477 37.500 0.00 0.00 0.00 4.17
3432 3555 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
3434 3557 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
3610 3733 4.081309 GCACTCCACACTACATTAGGGTTA 60.081 45.833 0.00 0.00 40.09 2.85
3650 3773 7.255730 GCATTCCCTAAAATCATGCTGTCTTAT 60.256 37.037 0.00 0.00 37.78 1.73
3772 3895 4.654915 TCAAGTGGAATCAGATGCTCAAA 58.345 39.130 0.00 0.00 0.00 2.69
3882 4005 9.645059 TCATTTAGTTCTGTCTGTTCTATTCAG 57.355 33.333 0.00 0.00 0.00 3.02
4190 4357 6.142139 CAGATCGTAGATCTAGCTGTCAAAG 58.858 44.000 11.66 0.00 45.12 2.77
4253 4420 8.818057 GCTAATATCACAAGACTTAAACGACAT 58.182 33.333 0.00 0.00 0.00 3.06
4593 4760 3.501062 CCATATGATACCAGCAAGCAGTG 59.499 47.826 3.65 0.00 0.00 3.66
4668 4835 4.455877 CGGAACTCCTCAGCAAAGTATTTT 59.544 41.667 0.00 0.00 35.03 1.82
4678 4845 2.070028 GAGAAAACGGAACTCCTCAGC 58.930 52.381 0.00 0.00 0.00 4.26
4722 4889 2.621055 ACAAAGTTGCCAATTCTACGCA 59.379 40.909 0.00 0.00 0.00 5.24
4769 4936 1.964223 AGACACTCGGAAAGCAAGAGA 59.036 47.619 0.00 0.00 36.03 3.10
4772 4939 3.561725 AGAAAAGACACTCGGAAAGCAAG 59.438 43.478 0.00 0.00 0.00 4.01
4781 4948 5.175126 ACGAATGTAACAGAAAAGACACTCG 59.825 40.000 3.52 3.52 44.50 4.18
4782 4949 6.526566 ACGAATGTAACAGAAAAGACACTC 57.473 37.500 0.00 0.00 0.00 3.51
4787 4954 6.912203 TGTCAACGAATGTAACAGAAAAGA 57.088 33.333 0.00 0.00 0.00 2.52
4844 5013 2.866065 GCAACATGGGTAAGGTGCAAAC 60.866 50.000 0.00 0.00 0.00 2.93
4976 5145 5.173854 GCAAGCAGAAGTGTGATACAAAAAC 59.826 40.000 0.00 0.00 0.00 2.43
5370 6280 4.201851 CCAGAGATTTTATCACCACTTGCG 60.202 45.833 0.00 0.00 0.00 4.85
5377 6287 5.363939 CCAGTCTCCAGAGATTTTATCACC 58.636 45.833 0.00 0.00 39.97 4.02
5462 6372 1.939974 TGCCTCGTGCTATCATCAAC 58.060 50.000 1.74 0.00 42.00 3.18
5811 6817 0.954452 AAAGGCAAAGCAACTCGAGG 59.046 50.000 18.41 0.17 0.00 4.63
5862 6868 7.849804 ATAGGTAGCACAAACAGAACATTAG 57.150 36.000 0.00 0.00 0.00 1.73
5902 6913 9.783081 TCAGAATTGCTTTAGAATATGCTCATA 57.217 29.630 0.00 0.00 0.00 2.15
5969 6980 7.355017 CCAATCATAACAGACATGATTAACCG 58.645 38.462 0.00 0.19 46.44 4.44
5985 6996 6.313519 AGAACTACAAGGAGCCAATCATAA 57.686 37.500 0.00 0.00 0.00 1.90
6013 7024 6.070251 TGTGGTTGTGGATAAGTCTACATCAT 60.070 38.462 0.00 0.00 44.03 2.45
6086 7099 4.079154 TCACTCCAGGCTAGAGGATTTAGA 60.079 45.833 14.45 0.31 35.58 2.10
6100 7119 4.455606 GTCCCTTCATTTATCACTCCAGG 58.544 47.826 0.00 0.00 0.00 4.45
6119 7138 3.671716 AGAATGTACCAAGTTTCCGTCC 58.328 45.455 0.00 0.00 0.00 4.79
6122 7141 3.670625 TGGAGAATGTACCAAGTTTCCG 58.329 45.455 0.00 0.00 32.93 4.30
6130 7149 6.867519 TTGTAAGAGATGGAGAATGTACCA 57.132 37.500 0.00 0.00 40.57 3.25
6176 7195 2.769095 GTGCCTCCTTCAGTCTTCCTAT 59.231 50.000 0.00 0.00 0.00 2.57
6297 7316 9.092876 GGACAAAACAATTGTTTCTATGTCAAA 57.907 29.630 37.63 0.00 45.59 2.69
6298 7317 7.708752 GGGACAAAACAATTGTTTCTATGTCAA 59.291 33.333 37.63 0.00 45.59 3.18
6299 7318 7.206687 GGGACAAAACAATTGTTTCTATGTCA 58.793 34.615 37.63 0.00 45.59 3.58
6300 7319 6.362283 CGGGACAAAACAATTGTTTCTATGTC 59.638 38.462 34.17 34.17 46.47 3.06
6301 7320 6.212955 CGGGACAAAACAATTGTTTCTATGT 58.787 36.000 31.10 29.20 46.47 2.29
6302 7321 5.118510 GCGGGACAAAACAATTGTTTCTATG 59.881 40.000 31.10 26.78 46.47 2.23
6303 7322 5.221342 TGCGGGACAAAACAATTGTTTCTAT 60.221 36.000 31.10 21.00 46.47 1.98
6689 7715 8.755018 AGATCTTTGAAAAATTTAACAGCAACG 58.245 29.630 0.00 0.00 0.00 4.10
6707 7734 9.512435 GAACAACATAAATCCATCAGATCTTTG 57.488 33.333 0.00 0.00 32.47 2.77
6870 7897 7.374272 TCTCATCATCGTAATCTGAATCTTCC 58.626 38.462 0.00 0.00 0.00 3.46
6957 7984 1.396301 AGACGTAAGCTACCTCGAACG 59.604 52.381 0.00 0.82 45.62 3.95
7003 8030 4.286297 TCCCAACAGACTGTTCATTAGG 57.714 45.455 18.02 14.87 38.77 2.69
7154 8181 3.844211 ACAACAGGGTGGTATATGTCAGT 59.156 43.478 0.00 0.00 0.00 3.41
7168 8207 0.527565 GGCTACATTGCACAACAGGG 59.472 55.000 0.00 0.00 34.04 4.45
7210 8249 3.164268 TGCAGTGCCCAACATATCTTTT 58.836 40.909 13.72 0.00 0.00 2.27
7349 8388 3.669536 TCTGTTATCCGTCATGCAAACA 58.330 40.909 0.00 0.00 0.00 2.83
7510 8550 7.538678 CACGAGCTTTGCACTCTTATTTTAATT 59.461 33.333 0.00 0.00 31.71 1.40
7624 9912 4.408921 AGAAGCTAGTATATGCCACACCAA 59.591 41.667 0.00 0.00 0.00 3.67
7639 9927 3.063725 GCAAGTGATTCTGCAGAAGCTAG 59.936 47.826 36.42 25.48 40.76 3.42
7825 10116 6.575572 CGTATCACAAGCAAAAATTAACGTGA 59.424 34.615 0.00 0.00 36.65 4.35
7841 10132 3.181500 CGGTCTCAGTCATCGTATCACAA 60.181 47.826 0.00 0.00 0.00 3.33
7845 10136 2.350007 GCTCGGTCTCAGTCATCGTATC 60.350 54.545 0.00 0.00 0.00 2.24
7852 10143 2.640302 GGCAGCTCGGTCTCAGTCA 61.640 63.158 0.00 0.00 0.00 3.41
7994 10285 3.322828 ACGAGCCTACCTTTAAGTGACAA 59.677 43.478 0.00 0.00 0.00 3.18
8021 10312 4.813296 AATGAGTTCACGTCCAACTTTC 57.187 40.909 10.13 1.46 34.10 2.62
8044 10335 7.095816 TGACATATCTATCGCAAAAATACACCG 60.096 37.037 0.00 0.00 0.00 4.94
8074 10365 4.571919 TGTTCCATAAAACTACAGGTCCG 58.428 43.478 0.00 0.00 0.00 4.79
8236 10527 3.153919 TGGCAATAAATTCCCCTATCGC 58.846 45.455 0.00 0.00 0.00 4.58
8345 10636 4.522789 AGCCACGGTAAGAAATGAAATTGT 59.477 37.500 0.00 0.00 36.10 2.71
8393 10684 7.989947 TCACAACTAAAGAAGATATAGGGGT 57.010 36.000 0.00 0.00 0.00 4.95
8546 10837 7.903431 GTCCATAACTAGCAATAAACAAAGACG 59.097 37.037 0.00 0.00 0.00 4.18
8676 10967 5.757850 AAGGAAGTTTTGACAGCTTACAG 57.242 39.130 0.00 0.00 0.00 2.74
8822 11116 3.424433 GCCTGCACATAGAAACGTAACAC 60.424 47.826 0.00 0.00 0.00 3.32
8831 11125 3.084039 CTCAAAAGGCCTGCACATAGAA 58.916 45.455 5.69 0.00 0.00 2.10
8998 11299 7.938490 TGACCTAGCTCAATGCATATTTATCAA 59.062 33.333 0.00 0.00 45.94 2.57
9019 11320 6.957631 TCACATTATTTGTATCCTGTGACCT 58.042 36.000 0.00 0.00 38.36 3.85
9085 11386 6.348498 CCCTTTCCTGAAAAGTGAAACAAAT 58.652 36.000 0.00 0.00 42.46 2.32
9107 11408 2.783510 TGGATTAAATGTCCCTCTCCCC 59.216 50.000 0.00 0.00 34.76 4.81
9144 11445 7.759489 TGCAATCTCACTTTTACCTAAACAT 57.241 32.000 0.00 0.00 0.00 2.71
9158 11459 3.374745 CAACACAACCTTGCAATCTCAC 58.625 45.455 0.00 0.00 0.00 3.51
9347 11669 2.351418 CAGAAAAACGTCACAGCAGACA 59.649 45.455 0.00 0.00 38.43 3.41
9630 11957 3.754586 TTGCCTGCCCACTTTGCCT 62.755 57.895 0.00 0.00 0.00 4.75
9738 12065 3.432051 GACAGCCTAGCGTCGCCAT 62.432 63.158 14.86 0.00 0.00 4.40
9740 12067 3.759766 GAGACAGCCTAGCGTCGCC 62.760 68.421 14.86 0.00 37.25 5.54
9770 12098 1.673760 CCGACAGCACAAACGATTTG 58.326 50.000 8.35 8.35 45.95 2.32
9774 12102 3.334751 CGCCGACAGCACAAACGA 61.335 61.111 0.00 0.00 44.04 3.85
9776 12104 3.947841 TGCGCCGACAGCACAAAC 61.948 61.111 4.18 0.00 44.04 2.93
9798 12126 1.010125 CATTATCCAAACGCCGGCG 60.010 57.895 44.88 44.88 46.03 6.46
9801 12129 0.029300 CTGGCATTATCCAAACGCCG 59.971 55.000 0.00 0.00 46.02 6.46
9809 12137 2.222027 CCGGAGAAACTGGCATTATCC 58.778 52.381 0.00 4.73 38.29 2.59
9830 12158 2.100631 CGACAACCTAGCGGCCTTG 61.101 63.158 0.00 0.00 0.00 3.61
9831 12159 2.264794 CGACAACCTAGCGGCCTT 59.735 61.111 0.00 0.00 0.00 4.35
9832 12160 3.771160 CCGACAACCTAGCGGCCT 61.771 66.667 0.00 0.00 38.46 5.19
9836 12164 2.509336 CCAGCCGACAACCTAGCG 60.509 66.667 0.00 0.00 0.00 4.26
9837 12165 2.820037 GCCAGCCGACAACCTAGC 60.820 66.667 0.00 0.00 0.00 3.42
9838 12166 2.509336 CGCCAGCCGACAACCTAG 60.509 66.667 0.00 0.00 40.02 3.02
9839 12167 2.874664 AACGCCAGCCGACAACCTA 61.875 57.895 0.00 0.00 41.02 3.08
9840 12168 4.250305 AACGCCAGCCGACAACCT 62.250 61.111 0.00 0.00 41.02 3.50
9841 12169 4.025401 CAACGCCAGCCGACAACC 62.025 66.667 0.00 0.00 41.02 3.77
9842 12170 4.683334 GCAACGCCAGCCGACAAC 62.683 66.667 0.00 0.00 41.02 3.32
9848 12176 3.188786 CTACTCGCAACGCCAGCC 61.189 66.667 0.00 0.00 0.00 4.85
9849 12177 3.188786 CCTACTCGCAACGCCAGC 61.189 66.667 0.00 0.00 0.00 4.85
9850 12178 1.352156 GAACCTACTCGCAACGCCAG 61.352 60.000 0.00 0.00 0.00 4.85
9851 12179 1.373748 GAACCTACTCGCAACGCCA 60.374 57.895 0.00 0.00 0.00 5.69
9852 12180 2.442188 CGAACCTACTCGCAACGCC 61.442 63.158 0.00 0.00 31.04 5.68
9853 12181 2.442188 CCGAACCTACTCGCAACGC 61.442 63.158 0.00 0.00 37.51 4.84
9854 12182 0.665369 AACCGAACCTACTCGCAACG 60.665 55.000 0.00 0.00 37.51 4.10
9855 12183 1.066136 GAACCGAACCTACTCGCAAC 58.934 55.000 0.00 0.00 37.51 4.17
9856 12184 0.387622 CGAACCGAACCTACTCGCAA 60.388 55.000 0.00 0.00 37.51 4.85
9857 12185 1.210931 CGAACCGAACCTACTCGCA 59.789 57.895 0.00 0.00 37.51 5.10
9858 12186 0.796113 GTCGAACCGAACCTACTCGC 60.796 60.000 0.00 0.00 37.72 5.03
9859 12187 0.179179 GGTCGAACCGAACCTACTCG 60.179 60.000 0.00 0.00 37.65 4.18
9860 12188 3.710106 GGTCGAACCGAACCTACTC 57.290 57.895 0.00 0.00 37.65 2.59
9870 12198 1.828331 GAACTGTGTGCGGTCGAACC 61.828 60.000 0.00 0.00 31.99 3.62
9871 12199 1.149361 TGAACTGTGTGCGGTCGAAC 61.149 55.000 0.00 0.00 31.99 3.95
9872 12200 0.874175 CTGAACTGTGTGCGGTCGAA 60.874 55.000 0.00 0.00 31.99 3.71
9873 12201 1.299850 CTGAACTGTGTGCGGTCGA 60.300 57.895 0.00 0.00 31.99 4.20
9874 12202 2.943345 GCTGAACTGTGTGCGGTCG 61.943 63.158 0.00 0.00 31.99 4.79
9875 12203 1.595382 AGCTGAACTGTGTGCGGTC 60.595 57.895 0.00 0.00 31.99 4.79
9876 12204 1.889105 CAGCTGAACTGTGTGCGGT 60.889 57.895 8.42 0.00 41.86 5.68
9877 12205 2.941333 CAGCTGAACTGTGTGCGG 59.059 61.111 8.42 0.00 41.86 5.69
9885 12213 5.980116 CGTTCTATATACTTGCAGCTGAACT 59.020 40.000 20.43 0.00 31.98 3.01
9886 12214 5.749109 ACGTTCTATATACTTGCAGCTGAAC 59.251 40.000 20.43 7.16 0.00 3.18
9887 12215 5.902681 ACGTTCTATATACTTGCAGCTGAA 58.097 37.500 20.43 2.96 0.00 3.02
9888 12216 5.299531 AGACGTTCTATATACTTGCAGCTGA 59.700 40.000 20.43 0.00 0.00 4.26
9889 12217 5.400782 CAGACGTTCTATATACTTGCAGCTG 59.599 44.000 10.11 10.11 0.00 4.24
9890 12218 5.299531 TCAGACGTTCTATATACTTGCAGCT 59.700 40.000 0.00 0.00 0.00 4.24
9891 12219 5.399892 GTCAGACGTTCTATATACTTGCAGC 59.600 44.000 0.00 0.00 0.00 5.25
9892 12220 5.621634 CGTCAGACGTTCTATATACTTGCAG 59.378 44.000 15.21 0.00 36.74 4.41
9893 12221 5.505159 CCGTCAGACGTTCTATATACTTGCA 60.505 44.000 21.34 0.00 40.58 4.08
9894 12222 4.910456 CCGTCAGACGTTCTATATACTTGC 59.090 45.833 21.34 0.00 40.58 4.01
9895 12223 4.910456 GCCGTCAGACGTTCTATATACTTG 59.090 45.833 21.34 2.71 40.58 3.16
9896 12224 4.577693 TGCCGTCAGACGTTCTATATACTT 59.422 41.667 21.34 0.00 40.58 2.24
9897 12225 4.024218 GTGCCGTCAGACGTTCTATATACT 60.024 45.833 21.34 0.00 40.58 2.12
9898 12226 4.217497 GTGCCGTCAGACGTTCTATATAC 58.783 47.826 21.34 5.12 40.58 1.47
9899 12227 3.878699 TGTGCCGTCAGACGTTCTATATA 59.121 43.478 21.34 0.00 40.58 0.86
9900 12228 2.686405 TGTGCCGTCAGACGTTCTATAT 59.314 45.455 21.34 0.00 40.58 0.86
9901 12229 2.086094 TGTGCCGTCAGACGTTCTATA 58.914 47.619 21.34 0.46 40.58 1.31
9902 12230 0.885879 TGTGCCGTCAGACGTTCTAT 59.114 50.000 21.34 0.00 40.58 1.98
9903 12231 0.039798 GTGTGCCGTCAGACGTTCTA 60.040 55.000 21.34 2.91 40.58 2.10
9904 12232 1.299926 GTGTGCCGTCAGACGTTCT 60.300 57.895 21.34 0.00 40.58 3.01
9905 12233 3.231501 GTGTGCCGTCAGACGTTC 58.768 61.111 21.34 12.92 40.58 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.