Multiple sequence alignment - TraesCS4D01G298900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G298900 chr4D 100.000 6500 0 0 1 6500 468218049 468211550 0.000000e+00 12004.0
1 TraesCS4D01G298900 chr4D 84.133 271 21 14 2765 3030 436372016 436371763 6.510000e-60 243.0
2 TraesCS4D01G298900 chr4B 88.947 5184 342 111 637 5687 586470201 586465116 0.000000e+00 6185.0
3 TraesCS4D01G298900 chr4B 90.598 819 55 11 5689 6500 586465067 586464264 0.000000e+00 1066.0
4 TraesCS4D01G298900 chr4B 83.156 938 102 37 3489 4397 537826004 537825094 0.000000e+00 806.0
5 TraesCS4D01G298900 chr4B 87.887 388 25 3 1 366 86129093 86128706 2.780000e-118 436.0
6 TraesCS4D01G298900 chr4B 80.645 434 49 17 4479 4900 537825058 537824648 2.940000e-78 303.0
7 TraesCS4D01G298900 chr4B 87.556 225 25 2 3036 3258 537827560 537827337 2.330000e-64 257.0
8 TraesCS4D01G298900 chr4B 84.270 178 25 3 2855 3030 537829915 537829739 3.120000e-38 171.0
9 TraesCS4D01G298900 chr4A 90.267 2733 158 56 1794 4445 3143335 3146040 0.000000e+00 3474.0
10 TraesCS4D01G298900 chr4A 88.445 1402 92 28 382 1736 3141930 3143308 0.000000e+00 1628.0
11 TraesCS4D01G298900 chr4A 86.219 878 61 27 4446 5316 3146322 3147146 0.000000e+00 896.0
12 TraesCS4D01G298900 chr4A 89.039 739 54 14 5769 6499 3147524 3148243 0.000000e+00 891.0
13 TraesCS4D01G298900 chr4A 82.609 253 26 10 2783 3030 31769926 31770165 2.380000e-49 207.0
14 TraesCS4D01G298900 chr4A 90.099 101 10 0 5408 5508 3147225 3147325 1.470000e-26 132.0
15 TraesCS4D01G298900 chr2A 89.663 919 63 15 3746 4652 4011833 4012731 0.000000e+00 1142.0
16 TraesCS4D01G298900 chr2A 88.718 390 23 5 1 373 768631029 768631414 2.140000e-124 457.0
17 TraesCS4D01G298900 chr2A 84.416 154 20 2 381 532 154808629 154808478 1.460000e-31 148.0
18 TraesCS4D01G298900 chr2A 81.699 153 26 2 381 532 714000748 714000597 6.840000e-25 126.0
19 TraesCS4D01G298900 chr2A 100.000 30 0 0 4664 4693 4012730 4012759 1.000000e-03 56.5
20 TraesCS4D01G298900 chr5A 88.791 910 66 14 3746 4652 11943766 11944642 0.000000e+00 1083.0
21 TraesCS4D01G298900 chr5A 88.822 331 17 4 1 314 6571933 6572260 7.900000e-104 388.0
22 TraesCS4D01G298900 chr5A 100.000 30 0 0 4664 4693 11944641 11944670 1.000000e-03 56.5
23 TraesCS4D01G298900 chr7A 89.169 397 18 6 1 375 712464940 712465333 7.630000e-129 472.0
24 TraesCS4D01G298900 chr7A 88.251 383 24 5 1 366 646475165 646475543 7.740000e-119 438.0
25 TraesCS4D01G298900 chr7A 83.000 500 66 12 3589 4083 698678645 698678160 1.000000e-117 435.0
26 TraesCS4D01G298900 chr7A 81.935 155 28 0 378 532 669493860 669494014 1.470000e-26 132.0
27 TraesCS4D01G298900 chr7A 82.119 151 27 0 381 531 562180406 562180256 5.290000e-26 130.0
28 TraesCS4D01G298900 chr7A 81.410 156 27 2 378 532 18674618 18674772 6.840000e-25 126.0
29 TraesCS4D01G298900 chr2D 88.471 399 22 5 1 376 287893925 287893528 1.650000e-125 460.0
30 TraesCS4D01G298900 chr2D 100.000 31 0 0 4300 4330 30411929 30411959 2.530000e-04 58.4
31 TraesCS4D01G298900 chr1A 88.714 381 20 6 3 366 520403294 520402920 1.660000e-120 444.0
32 TraesCS4D01G298900 chr1A 91.124 169 14 1 2600 2767 480262300 480262468 1.820000e-55 228.0
33 TraesCS4D01G298900 chr1A 81.579 152 28 0 381 532 319422048 319421897 6.840000e-25 126.0
34 TraesCS4D01G298900 chr6B 87.817 394 24 7 1 373 176040409 176040019 2.150000e-119 440.0
35 TraesCS4D01G298900 chr6B 88.114 387 24 6 1 366 634313923 634314308 2.150000e-119 440.0
36 TraesCS4D01G298900 chr6B 91.051 257 19 3 1 253 292766944 292766688 1.740000e-90 344.0
37 TraesCS4D01G298900 chr5D 87.313 402 25 7 1 379 77589982 77590380 2.780000e-118 436.0
38 TraesCS4D01G298900 chr5D 92.537 67 5 0 5001 5067 546306716 546306782 5.360000e-16 97.1
39 TraesCS4D01G298900 chr3B 87.626 396 24 7 1 371 809142430 809142035 2.780000e-118 436.0
40 TraesCS4D01G298900 chr3B 86.534 401 24 7 1 374 78142096 78141699 1.300000e-111 414.0
41 TraesCS4D01G298900 chr1B 88.391 379 23 5 1 358 646490092 646490470 2.780000e-118 436.0
42 TraesCS4D01G298900 chr1B 87.186 398 28 7 1 376 566149254 566148858 1.290000e-116 431.0
43 TraesCS4D01G298900 chr1B 91.603 131 10 1 241 370 168980088 168980218 5.180000e-41 180.0
44 TraesCS4D01G298900 chr1B 97.059 34 1 0 4300 4333 68137441 68137408 2.530000e-04 58.4
45 TraesCS4D01G298900 chr6A 81.870 524 80 12 3566 4083 591438669 591438155 1.670000e-115 427.0
46 TraesCS4D01G298900 chr6A 82.051 156 26 2 378 532 461111541 461111695 1.470000e-26 132.0
47 TraesCS4D01G298900 chr7D 82.565 499 70 10 3589 4083 606636889 606637374 2.170000e-114 424.0
48 TraesCS4D01G298900 chr7D 80.501 559 90 17 3533 4083 93790346 93789799 1.690000e-110 411.0
49 TraesCS4D01G298900 chr6D 81.298 524 83 12 3566 4083 443848601 443848087 1.690000e-110 411.0
50 TraesCS4D01G298900 chr7B 82.000 500 71 12 3589 4083 690754185 690753700 2.180000e-109 407.0
51 TraesCS4D01G298900 chr7B 88.482 191 19 3 2600 2788 610507312 610507123 1.820000e-55 228.0
52 TraesCS4D01G298900 chr7B 85.714 70 10 0 4184 4253 76003680 76003749 2.510000e-09 75.0
53 TraesCS4D01G298900 chr3D 88.947 190 20 1 2600 2788 562673640 562673829 3.920000e-57 233.0
54 TraesCS4D01G298900 chr3A 83.766 154 21 2 381 532 85380069 85379918 6.790000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G298900 chr4D 468211550 468218049 6499 True 12004.00 12004 100.00000 1 6500 1 chr4D.!!$R2 6499
1 TraesCS4D01G298900 chr4B 586464264 586470201 5937 True 3625.50 6185 89.77250 637 6500 2 chr4B.!!$R3 5863
2 TraesCS4D01G298900 chr4B 537824648 537829915 5267 True 384.25 806 83.90675 2855 4900 4 chr4B.!!$R2 2045
3 TraesCS4D01G298900 chr4A 3141930 3148243 6313 False 1404.20 3474 88.81380 382 6499 5 chr4A.!!$F2 6117
4 TraesCS4D01G298900 chr2A 4011833 4012759 926 False 599.25 1142 94.83150 3746 4693 2 chr2A.!!$F2 947
5 TraesCS4D01G298900 chr5A 11943766 11944670 904 False 569.75 1083 94.39550 3746 4693 2 chr5A.!!$F2 947
6 TraesCS4D01G298900 chr6A 591438155 591438669 514 True 427.00 427 81.87000 3566 4083 1 chr6A.!!$R1 517
7 TraesCS4D01G298900 chr7D 93789799 93790346 547 True 411.00 411 80.50100 3533 4083 1 chr7D.!!$R1 550
8 TraesCS4D01G298900 chr6D 443848087 443848601 514 True 411.00 411 81.29800 3566 4083 1 chr6D.!!$R1 517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 863 0.250124 CACACACGGTAAGCTTCCCA 60.250 55.0 8.97 0.0 0.00 4.37 F
1886 1940 0.179009 CCGGGGACATCATCAGCATT 60.179 55.0 0.00 0.0 0.00 3.56 F
1910 1964 0.184692 TTGGTGACATTGTCCCTGCA 59.815 50.0 14.05 0.0 42.32 4.41 F
3013 3100 0.318445 CTTGCTTTGAGCCTGCACAC 60.318 55.0 0.00 0.0 41.51 3.82 F
3481 6860 0.034756 TGCTGGCGAATGTACACTGT 59.965 50.0 0.00 0.0 0.00 3.55 F
5320 9089 0.172578 CGAGATCGCCAGGTACAACA 59.827 55.0 0.00 0.0 0.00 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2212 2290 0.776810 TCACCTTCTGGAAATGGCCA 59.223 50.000 8.56 8.56 37.04 5.36 R
3039 5294 1.018226 CGTGCCTGAGGAAAGAGCAG 61.018 60.000 0.65 0.00 33.37 4.24 R
3101 5362 1.207329 GTTATGGCCGTCCTCTTGTCT 59.793 52.381 0.00 0.00 0.00 3.41 R
4972 8741 0.679505 TGTAGAGCCATATGACGCCC 59.320 55.000 3.65 0.00 0.00 6.13 R
5325 9094 0.030638 CACGGGAGCAAAACCTTGTG 59.969 55.000 0.00 0.00 34.79 3.33 R
6340 10254 0.599466 AGCTCCATGACATCGATGCG 60.599 55.000 25.11 11.02 0.00 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.550431 CCATCACCCGCCGGATCT 61.550 66.667 5.05 0.00 0.00 2.75
30 31 2.280389 CATCACCCGCCGGATCTG 60.280 66.667 5.05 0.00 0.00 2.90
31 32 3.550431 ATCACCCGCCGGATCTGG 61.550 66.667 16.98 16.98 0.00 3.86
87 88 3.406200 CCTCCAGAGCCCCACCAG 61.406 72.222 0.00 0.00 0.00 4.00
88 89 4.106925 CTCCAGAGCCCCACCAGC 62.107 72.222 0.00 0.00 0.00 4.85
111 112 2.612251 GGGGGAGGAGGAGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
112 113 2.612251 GGGGAGGAGGAGAGGAGG 59.388 72.222 0.00 0.00 0.00 4.30
113 114 2.123033 GGGAGGAGGAGAGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
114 115 2.520741 GGAGGAGGAGAGGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
115 116 2.598467 GAGGAGGAGAGGAGGCGA 59.402 66.667 0.00 0.00 0.00 5.54
116 117 1.826487 GAGGAGGAGAGGAGGCGAC 60.826 68.421 0.00 0.00 0.00 5.19
117 118 3.213402 GGAGGAGAGGAGGCGACG 61.213 72.222 0.00 0.00 0.00 5.12
118 119 3.894947 GAGGAGAGGAGGCGACGC 61.895 72.222 12.43 12.43 0.00 5.19
131 132 3.986006 GACGCCGACAGGTCACCA 61.986 66.667 0.00 0.00 40.50 4.17
132 133 3.916392 GACGCCGACAGGTCACCAG 62.916 68.421 0.00 0.00 40.50 4.00
133 134 4.742201 CGCCGACAGGTCACCAGG 62.742 72.222 0.00 0.00 40.50 4.45
134 135 4.394712 GCCGACAGGTCACCAGGG 62.395 72.222 0.00 0.00 40.50 4.45
135 136 3.706373 CCGACAGGTCACCAGGGG 61.706 72.222 0.00 0.00 0.00 4.79
136 137 3.706373 CGACAGGTCACCAGGGGG 61.706 72.222 0.00 0.00 41.29 5.40
137 138 4.035102 GACAGGTCACCAGGGGGC 62.035 72.222 0.00 0.00 37.90 5.80
153 154 3.771160 GCGAGGCGGAGGAAGGAA 61.771 66.667 0.00 0.00 0.00 3.36
154 155 2.496817 CGAGGCGGAGGAAGGAAG 59.503 66.667 0.00 0.00 0.00 3.46
155 156 2.188207 GAGGCGGAGGAAGGAAGC 59.812 66.667 0.00 0.00 0.00 3.86
157 158 4.840005 GGCGGAGGAAGGAAGCCG 62.840 72.222 0.00 0.00 46.14 5.52
158 159 4.840005 GCGGAGGAAGGAAGCCGG 62.840 72.222 0.00 0.00 43.73 6.13
159 160 3.075005 CGGAGGAAGGAAGCCGGA 61.075 66.667 5.05 0.00 40.08 5.14
160 161 2.904131 GGAGGAAGGAAGCCGGAG 59.096 66.667 5.05 0.00 0.00 4.63
161 162 2.188207 GAGGAAGGAAGCCGGAGC 59.812 66.667 5.05 0.00 40.32 4.70
162 163 2.607750 AGGAAGGAAGCCGGAGCA 60.608 61.111 5.05 0.00 43.56 4.26
163 164 2.185310 GAGGAAGGAAGCCGGAGCAA 62.185 60.000 5.05 0.00 43.56 3.91
164 165 1.303317 GGAAGGAAGCCGGAGCAAA 60.303 57.895 5.05 0.00 43.56 3.68
165 166 1.308783 GGAAGGAAGCCGGAGCAAAG 61.309 60.000 5.05 0.00 43.56 2.77
166 167 1.303643 AAGGAAGCCGGAGCAAAGG 60.304 57.895 5.05 0.00 43.56 3.11
172 173 3.752339 CCGGAGCAAAGGCAAGCC 61.752 66.667 2.02 2.02 44.61 4.35
173 174 4.107051 CGGAGCAAAGGCAAGCCG 62.107 66.667 5.28 0.00 44.61 5.52
174 175 3.752339 GGAGCAAAGGCAAGCCGG 61.752 66.667 5.28 0.00 44.61 6.13
175 176 4.426112 GAGCAAAGGCAAGCCGGC 62.426 66.667 21.89 21.89 44.61 6.13
244 245 2.203224 CGAGGGAGAGAGCCGCTA 60.203 66.667 0.00 0.00 0.00 4.26
245 246 2.548295 CGAGGGAGAGAGCCGCTAC 61.548 68.421 0.00 0.00 0.00 3.58
246 247 2.517402 AGGGAGAGAGCCGCTACG 60.517 66.667 0.00 0.00 0.00 3.51
247 248 4.273257 GGGAGAGAGCCGCTACGC 62.273 72.222 0.00 0.00 0.00 4.42
294 295 3.157949 GGCGAGGGAGGGAGGAAG 61.158 72.222 0.00 0.00 0.00 3.46
295 296 3.157949 GCGAGGGAGGGAGGAAGG 61.158 72.222 0.00 0.00 0.00 3.46
296 297 2.444895 CGAGGGAGGGAGGAAGGG 60.445 72.222 0.00 0.00 0.00 3.95
297 298 2.040359 GAGGGAGGGAGGAAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
298 299 4.439901 AGGGAGGGAGGAAGGGGC 62.440 72.222 0.00 0.00 0.00 5.80
299 300 4.760220 GGGAGGGAGGAAGGGGCA 62.760 72.222 0.00 0.00 0.00 5.36
300 301 3.093172 GGAGGGAGGAAGGGGCAG 61.093 72.222 0.00 0.00 0.00 4.85
301 302 2.041265 GAGGGAGGAAGGGGCAGA 59.959 66.667 0.00 0.00 0.00 4.26
302 303 2.041928 AGGGAGGAAGGGGCAGAG 59.958 66.667 0.00 0.00 0.00 3.35
303 304 3.093172 GGGAGGAAGGGGCAGAGG 61.093 72.222 0.00 0.00 0.00 3.69
304 305 3.093172 GGAGGAAGGGGCAGAGGG 61.093 72.222 0.00 0.00 0.00 4.30
305 306 2.041265 GAGGAAGGGGCAGAGGGA 59.959 66.667 0.00 0.00 0.00 4.20
306 307 2.285743 AGGAAGGGGCAGAGGGAC 60.286 66.667 0.00 0.00 0.00 4.46
307 308 3.787001 GGAAGGGGCAGAGGGACG 61.787 72.222 0.00 0.00 0.00 4.79
308 309 3.787001 GAAGGGGCAGAGGGACGG 61.787 72.222 0.00 0.00 0.00 4.79
329 330 4.832608 CGGCGGCACTAGGGTTCC 62.833 72.222 10.53 0.00 0.00 3.62
330 331 4.484872 GGCGGCACTAGGGTTCCC 62.485 72.222 3.07 0.00 0.00 3.97
331 332 3.400054 GCGGCACTAGGGTTCCCT 61.400 66.667 15.19 15.19 40.06 4.20
332 333 2.901042 CGGCACTAGGGTTCCCTC 59.099 66.667 14.24 0.00 37.64 4.30
333 334 2.732619 CGGCACTAGGGTTCCCTCC 61.733 68.421 14.24 8.32 37.64 4.30
395 396 5.180271 GGGAATCCGTCAATGTAAACTACA 58.820 41.667 0.00 0.00 43.80 2.74
431 432 9.367444 CACAAAACGGATTAGATTAAGACTAGT 57.633 33.333 0.00 0.00 0.00 2.57
432 433 9.939802 ACAAAACGGATTAGATTAAGACTAGTT 57.060 29.630 0.00 0.00 0.00 2.24
454 455 7.153315 AGTTGTTAGACTTAGTTTAGTGAGCC 58.847 38.462 0.00 0.00 0.00 4.70
457 458 8.413309 TGTTAGACTTAGTTTAGTGAGCCTAA 57.587 34.615 0.00 0.00 33.77 2.69
458 459 8.302438 TGTTAGACTTAGTTTAGTGAGCCTAAC 58.698 37.037 0.00 0.00 35.36 2.34
478 479 2.650322 CCATGCGGTGGTAATAGGTTT 58.350 47.619 0.00 0.00 43.44 3.27
479 480 2.357637 CCATGCGGTGGTAATAGGTTTG 59.642 50.000 0.00 0.00 43.44 2.93
480 481 1.455248 TGCGGTGGTAATAGGTTTGC 58.545 50.000 0.00 0.00 0.00 3.68
484 485 2.021457 GGTGGTAATAGGTTTGCGCAT 58.979 47.619 12.75 0.00 0.00 4.73
492 493 7.067129 TGGTAATAGGTTTGCGCATGTTTTATA 59.933 33.333 12.75 0.00 0.00 0.98
495 496 3.130340 AGGTTTGCGCATGTTTTATAGGG 59.870 43.478 12.75 0.00 0.00 3.53
519 520 6.961554 GGTGCGTTTAGAGAAGATAATGTTTG 59.038 38.462 0.00 0.00 0.00 2.93
523 524 7.201565 GCGTTTAGAGAAGATAATGTTTGCTCT 60.202 37.037 0.00 0.00 35.61 4.09
524 525 8.660373 CGTTTAGAGAAGATAATGTTTGCTCTT 58.340 33.333 0.00 0.00 33.69 2.85
534 535 8.345565 AGATAATGTTTGCTCTTTTATAAGCCG 58.654 33.333 0.00 0.00 37.73 5.52
535 536 4.091453 TGTTTGCTCTTTTATAAGCCGC 57.909 40.909 0.00 0.00 37.73 6.53
540 541 2.545946 GCTCTTTTATAAGCCGCAGAGG 59.454 50.000 0.00 0.00 44.97 3.69
591 594 5.451908 GTCGTTTTGCATGATTCTTTCAGA 58.548 37.500 0.00 0.00 37.89 3.27
601 604 5.752036 TGATTCTTTCAGATGACACCTCT 57.248 39.130 0.00 0.00 0.00 3.69
632 635 3.855154 GCATTTATCCGTGCACAACAACA 60.855 43.478 18.64 0.00 40.94 3.33
684 693 2.063266 GACATCGCCGTGTTTTGTCTA 58.937 47.619 0.00 0.00 35.09 2.59
723 732 4.357947 GACCGTCGGCTGACTGCA 62.358 66.667 22.92 0.00 43.21 4.41
727 736 3.418068 GTCGGCTGACTGCAGTGC 61.418 66.667 27.27 22.06 44.17 4.40
728 737 3.927548 TCGGCTGACTGCAGTGCA 61.928 61.111 27.27 18.58 44.17 4.57
786 795 0.673333 CAAATGGCGGGAAAAAGGGC 60.673 55.000 0.00 0.00 0.00 5.19
787 796 1.124477 AAATGGCGGGAAAAAGGGCA 61.124 50.000 0.00 0.00 40.66 5.36
788 797 1.543944 AATGGCGGGAAAAAGGGCAG 61.544 55.000 0.00 0.00 39.70 4.85
789 798 4.069232 GGCGGGAAAAAGGGCAGC 62.069 66.667 0.00 0.00 0.00 5.25
790 799 3.302344 GCGGGAAAAAGGGCAGCA 61.302 61.111 0.00 0.00 0.00 4.41
791 800 2.964978 CGGGAAAAAGGGCAGCAG 59.035 61.111 0.00 0.00 0.00 4.24
792 801 2.659016 GGGAAAAAGGGCAGCAGC 59.341 61.111 0.00 0.00 41.10 5.25
793 802 1.910276 GGGAAAAAGGGCAGCAGCT 60.910 57.895 0.00 0.00 41.70 4.24
809 820 2.443016 CTCACCCCCTCTCTCCCG 60.443 72.222 0.00 0.00 0.00 5.14
822 833 2.035632 CTCTCCCGCTTTACTCCTCAT 58.964 52.381 0.00 0.00 0.00 2.90
845 856 1.148310 CAAGAGCCACACACGGTAAG 58.852 55.000 0.00 0.00 0.00 2.34
847 858 1.004918 GAGCCACACACGGTAAGCT 60.005 57.895 0.00 0.00 40.06 3.74
849 860 0.602905 AGCCACACACGGTAAGCTTC 60.603 55.000 0.00 0.00 35.40 3.86
852 863 0.250124 CACACACGGTAAGCTTCCCA 60.250 55.000 8.97 0.00 0.00 4.37
854 865 0.872388 CACACGGTAAGCTTCCCAAC 59.128 55.000 8.97 0.00 0.00 3.77
906 925 3.596214 GCGAGTCCCAAACTTCTTATCA 58.404 45.455 0.00 0.00 38.74 2.15
1008 1036 1.307097 GGAGCTGAAGCATGGATGAC 58.693 55.000 4.90 0.00 45.16 3.06
1138 1166 2.557924 TCTGTGGAAATGTGGTTCATGC 59.442 45.455 0.00 0.00 36.81 4.06
1218 1246 1.282157 TCTCGATGTGGTCTCTCCTCA 59.718 52.381 0.00 0.00 42.73 3.86
1266 1294 2.263540 GGCGCTAACCGACTGGAA 59.736 61.111 7.64 0.00 43.29 3.53
1285 1313 3.309954 GGAAGAGAAGCGCGTAAATTCAT 59.690 43.478 8.43 0.00 0.00 2.57
1287 1315 3.786635 AGAGAAGCGCGTAAATTCATCT 58.213 40.909 8.43 9.08 0.00 2.90
1297 1326 4.212214 GCGTAAATTCATCTTCCCTGCTAG 59.788 45.833 0.00 0.00 0.00 3.42
1303 1332 6.567602 ATTCATCTTCCCTGCTAGTTACTT 57.432 37.500 0.00 0.00 0.00 2.24
1315 1344 6.060028 TGCTAGTTACTTGCTGTTTTTCTG 57.940 37.500 18.25 0.00 33.71 3.02
1322 1355 5.192327 ACTTGCTGTTTTTCTGGAAGATG 57.808 39.130 11.28 0.00 46.36 2.90
1329 1363 6.187727 TGTTTTTCTGGAAGATGTACCTCT 57.812 37.500 0.00 0.00 46.36 3.69
1331 1365 6.486657 TGTTTTTCTGGAAGATGTACCTCTTG 59.513 38.462 16.91 4.63 46.36 3.02
1348 1382 9.010029 GTACCTCTTGTGAATTCCTCATTTTTA 57.990 33.333 2.27 0.00 36.14 1.52
1427 1461 2.271497 GTGATGGAGGCAGCAGCT 59.729 61.111 0.00 0.00 41.70 4.24
1439 1473 0.179137 CAGCAGCTGTGATGGCATTG 60.179 55.000 16.64 0.00 36.37 2.82
1464 1498 0.894835 GGCAAATGGGGGTGTAAGTG 59.105 55.000 0.00 0.00 0.00 3.16
1468 1502 3.496331 CAAATGGGGGTGTAAGTGAAGT 58.504 45.455 0.00 0.00 0.00 3.01
1480 1514 7.417570 GGGTGTAAGTGAAGTACTATGCTATGT 60.418 40.741 0.00 0.00 39.18 2.29
1481 1515 7.648510 GGTGTAAGTGAAGTACTATGCTATGTC 59.351 40.741 0.00 0.00 39.18 3.06
1482 1516 7.648510 GTGTAAGTGAAGTACTATGCTATGTCC 59.351 40.741 0.00 0.00 39.18 4.02
1486 1520 6.039941 AGTGAAGTACTATGCTATGTCCTGTC 59.960 42.308 0.00 0.00 38.04 3.51
1487 1521 5.891551 TGAAGTACTATGCTATGTCCTGTCA 59.108 40.000 0.00 0.00 0.00 3.58
1488 1522 5.776173 AGTACTATGCTATGTCCTGTCAC 57.224 43.478 0.00 0.00 0.00 3.67
1489 1523 4.585162 AGTACTATGCTATGTCCTGTCACC 59.415 45.833 0.00 0.00 0.00 4.02
1490 1524 3.374764 ACTATGCTATGTCCTGTCACCA 58.625 45.455 0.00 0.00 0.00 4.17
1491 1525 3.774766 ACTATGCTATGTCCTGTCACCAA 59.225 43.478 0.00 0.00 0.00 3.67
1492 1526 3.939740 ATGCTATGTCCTGTCACCAAT 57.060 42.857 0.00 0.00 0.00 3.16
1513 1551 7.088905 CCAATTTCAGTCAAGAAAATCTCTGG 58.911 38.462 0.00 0.00 40.54 3.86
1522 1572 9.408648 AGTCAAGAAAATCTCTGGAAAAAGTAA 57.591 29.630 0.00 0.00 35.76 2.24
1565 1619 8.966069 AAAGAGAAGTGGTAGATTAATAAGGC 57.034 34.615 0.00 0.00 0.00 4.35
1634 1688 0.250234 TGGGAATCGTCTGCCTTCTG 59.750 55.000 0.00 0.00 0.00 3.02
1649 1703 3.111838 CCTTCTGATCATCAACTCGACG 58.888 50.000 0.00 0.00 0.00 5.12
1679 1733 1.815421 CGAGGAGAACAATGCCGGG 60.815 63.158 2.18 0.00 0.00 5.73
1732 1786 2.740447 CGCCTAGAACAAAGGTTGGTAC 59.260 50.000 0.00 0.00 37.36 3.34
1736 1790 3.832615 AGAACAAAGGTTGGTACGAGT 57.167 42.857 0.00 0.00 37.36 4.18
1737 1791 4.942761 AGAACAAAGGTTGGTACGAGTA 57.057 40.909 0.00 0.00 37.36 2.59
1738 1792 5.280654 AGAACAAAGGTTGGTACGAGTAA 57.719 39.130 0.00 0.00 37.36 2.24
1739 1793 5.052481 AGAACAAAGGTTGGTACGAGTAAC 58.948 41.667 0.00 0.00 37.36 2.50
1740 1794 4.405116 ACAAAGGTTGGTACGAGTAACA 57.595 40.909 0.00 0.00 34.12 2.41
1741 1795 4.768583 ACAAAGGTTGGTACGAGTAACAA 58.231 39.130 9.42 9.42 40.14 2.83
1742 1796 5.370679 ACAAAGGTTGGTACGAGTAACAAT 58.629 37.500 15.62 0.00 43.69 2.71
1743 1797 5.237779 ACAAAGGTTGGTACGAGTAACAATG 59.762 40.000 15.62 12.22 43.69 2.82
1744 1798 4.612264 AGGTTGGTACGAGTAACAATGT 57.388 40.909 15.62 4.99 43.69 2.71
1745 1799 5.726980 AGGTTGGTACGAGTAACAATGTA 57.273 39.130 15.62 0.00 43.69 2.29
1746 1800 6.100404 AGGTTGGTACGAGTAACAATGTAA 57.900 37.500 15.62 0.00 43.69 2.41
1747 1801 5.928264 AGGTTGGTACGAGTAACAATGTAAC 59.072 40.000 15.62 4.62 43.69 2.50
1748 1802 5.695816 GGTTGGTACGAGTAACAATGTAACA 59.304 40.000 15.62 0.00 43.69 2.41
1749 1803 6.369615 GGTTGGTACGAGTAACAATGTAACAT 59.630 38.462 15.62 0.00 43.69 2.71
1750 1804 6.954616 TGGTACGAGTAACAATGTAACATG 57.045 37.500 0.00 0.00 30.05 3.21
1751 1805 6.689554 TGGTACGAGTAACAATGTAACATGA 58.310 36.000 0.00 0.00 30.05 3.07
1752 1806 7.153315 TGGTACGAGTAACAATGTAACATGAA 58.847 34.615 0.00 0.00 30.05 2.57
1753 1807 7.656542 TGGTACGAGTAACAATGTAACATGAAA 59.343 33.333 0.00 0.00 30.05 2.69
1754 1808 8.166706 GGTACGAGTAACAATGTAACATGAAAG 58.833 37.037 0.00 0.00 0.00 2.62
1761 1815 9.128107 GTAACAATGTAACATGAAAGTTGATGG 57.872 33.333 0.00 0.00 33.07 3.51
1762 1816 7.288810 ACAATGTAACATGAAAGTTGATGGT 57.711 32.000 0.00 0.00 33.07 3.55
1770 1824 2.364970 TGAAAGTTGATGGTTGCCTTGG 59.635 45.455 0.00 0.00 0.00 3.61
1775 1829 3.964031 AGTTGATGGTTGCCTTGGTTTAA 59.036 39.130 0.00 0.00 0.00 1.52
1786 1840 5.569355 TGCCTTGGTTTAATCTGATCTTGA 58.431 37.500 0.00 0.00 0.00 3.02
1787 1841 5.415701 TGCCTTGGTTTAATCTGATCTTGAC 59.584 40.000 0.00 0.00 0.00 3.18
1791 1845 5.789521 TGGTTTAATCTGATCTTGACGTGA 58.210 37.500 0.00 0.00 0.00 4.35
1792 1846 5.637810 TGGTTTAATCTGATCTTGACGTGAC 59.362 40.000 0.00 0.00 0.00 3.67
1793 1847 5.869888 GGTTTAATCTGATCTTGACGTGACT 59.130 40.000 0.00 0.00 0.00 3.41
1794 1848 6.183360 GGTTTAATCTGATCTTGACGTGACTG 60.183 42.308 0.00 0.00 0.00 3.51
1795 1849 4.527509 AATCTGATCTTGACGTGACTGT 57.472 40.909 0.00 0.00 0.00 3.55
1796 1850 4.527509 ATCTGATCTTGACGTGACTGTT 57.472 40.909 0.00 0.00 0.00 3.16
1797 1851 4.322080 TCTGATCTTGACGTGACTGTTT 57.678 40.909 0.00 0.00 0.00 2.83
1845 1899 0.627451 AGATGGGCAATGGCAAGAGA 59.373 50.000 9.51 0.00 43.71 3.10
1886 1940 0.179009 CCGGGGACATCATCAGCATT 60.179 55.000 0.00 0.00 0.00 3.56
1910 1964 0.184692 TTGGTGACATTGTCCCTGCA 59.815 50.000 14.05 0.00 42.32 4.41
1958 2012 5.359009 TCCTCTCAAAATTGATCAGGCAATC 59.641 40.000 13.07 0.00 37.50 2.67
1960 2014 5.957798 TCTCAAAATTGATCAGGCAATCAC 58.042 37.500 0.00 0.00 37.50 3.06
1961 2015 5.477637 TCTCAAAATTGATCAGGCAATCACA 59.522 36.000 0.00 0.00 37.50 3.58
1962 2016 5.472148 TCAAAATTGATCAGGCAATCACAC 58.528 37.500 0.00 0.00 37.50 3.82
1980 2034 4.576053 TCACACTTACTGCATATGCCATTC 59.424 41.667 24.54 0.00 41.18 2.67
1983 2037 3.561310 ACTTACTGCATATGCCATTCACG 59.439 43.478 24.54 9.56 41.18 4.35
1984 2038 0.664761 ACTGCATATGCCATTCACGC 59.335 50.000 24.54 0.00 41.18 5.34
1994 2048 2.618241 TGCCATTCACGCCAAAGATATC 59.382 45.455 0.00 0.00 0.00 1.63
1995 2049 2.618241 GCCATTCACGCCAAAGATATCA 59.382 45.455 5.32 0.00 0.00 2.15
2019 2095 8.014322 CAGATTGTTCTGTCAAAATGATTTGG 57.986 34.615 0.00 0.00 43.73 3.28
2020 2096 7.654520 CAGATTGTTCTGTCAAAATGATTTGGT 59.345 33.333 0.00 0.00 43.73 3.67
2024 2100 5.964958 TCTGTCAAAATGATTTGGTCTCC 57.035 39.130 0.00 0.00 44.88 3.71
2029 2105 6.016024 TGTCAAAATGATTTGGTCTCCTTCTG 60.016 38.462 0.00 0.00 44.88 3.02
2031 2107 6.550854 TCAAAATGATTTGGTCTCCTTCTGTT 59.449 34.615 0.00 0.00 44.88 3.16
2033 2109 6.581171 AATGATTTGGTCTCCTTCTGTTTC 57.419 37.500 0.00 0.00 0.00 2.78
2034 2110 5.310409 TGATTTGGTCTCCTTCTGTTTCT 57.690 39.130 0.00 0.00 0.00 2.52
2036 2112 6.837312 TGATTTGGTCTCCTTCTGTTTCTTA 58.163 36.000 0.00 0.00 0.00 2.10
2037 2113 6.710744 TGATTTGGTCTCCTTCTGTTTCTTAC 59.289 38.462 0.00 0.00 0.00 2.34
2038 2114 4.618920 TGGTCTCCTTCTGTTTCTTACC 57.381 45.455 0.00 0.00 0.00 2.85
2045 2123 6.043243 TCTCCTTCTGTTTCTTACCATCTTGT 59.957 38.462 0.00 0.00 0.00 3.16
2077 2155 3.259374 TCACTGGAGAATCACTTCCTGTC 59.741 47.826 0.78 0.00 36.25 3.51
2134 2212 2.089980 ACTTGCAAGCATGGTGAGATC 58.910 47.619 26.27 0.00 0.00 2.75
2198 2276 1.675641 GCGGCTCATTTGGTGGACT 60.676 57.895 0.00 0.00 0.00 3.85
2212 2290 1.507140 TGGACTCCACAGAGGTTGTT 58.493 50.000 0.00 0.00 45.11 2.83
2232 2310 1.146774 TGGCCATTTCCAGAAGGTGAA 59.853 47.619 0.00 0.00 35.89 3.18
2233 2311 1.546029 GGCCATTTCCAGAAGGTGAAC 59.454 52.381 0.00 0.00 35.89 3.18
2240 2318 4.387026 TTCCAGAAGGTGAACCATCATT 57.613 40.909 7.41 0.00 38.01 2.57
2244 2322 5.724370 TCCAGAAGGTGAACCATCATTACTA 59.276 40.000 7.41 0.00 38.01 1.82
2247 2325 7.050377 CAGAAGGTGAACCATCATTACTACAT 58.950 38.462 7.41 0.00 38.01 2.29
2362 2442 1.929836 GGCAACTTCTGTATCTGCTCG 59.070 52.381 0.00 0.00 33.49 5.03
2482 2562 2.126463 ATACCGATCGCGATGCCG 60.126 61.111 29.09 23.60 40.82 5.69
2530 2610 3.300388 AGGTTCTCATCGCCTATCTCAA 58.700 45.455 0.00 0.00 0.00 3.02
2700 2781 1.599542 GTTCTCTGCTGCGACAAAACT 59.400 47.619 0.00 0.00 0.00 2.66
2703 2784 1.165907 TCTGCTGCGACAAAACTGGG 61.166 55.000 0.00 0.00 0.00 4.45
2706 2787 1.166531 GCTGCGACAAAACTGGGACT 61.167 55.000 0.00 0.00 0.00 3.85
2743 2824 4.549458 TCTTACCGTCGACAAAAACCTAG 58.451 43.478 17.16 1.74 0.00 3.02
3013 3100 0.318445 CTTGCTTTGAGCCTGCACAC 60.318 55.000 0.00 0.00 41.51 3.82
3020 3107 4.082787 GCTTTGAGCCTGCACACTAATAAA 60.083 41.667 0.00 0.00 34.48 1.40
3023 3110 2.945668 GAGCCTGCACACTAATAAAGGG 59.054 50.000 0.00 0.00 33.39 3.95
3033 5288 7.151976 GCACACTAATAAAGGGTCACAAATTT 58.848 34.615 0.00 0.00 41.08 1.82
3034 5289 7.655732 GCACACTAATAAAGGGTCACAAATTTT 59.344 33.333 0.00 0.00 41.08 1.82
3035 5290 9.541143 CACACTAATAAAGGGTCACAAATTTTT 57.459 29.630 0.00 0.00 41.08 1.94
3068 5327 2.050168 CAGGCACGCGCAAACATT 60.050 55.556 5.73 0.00 41.24 2.71
3101 5362 1.559368 TTCTCCCGTTCAATCCGGTA 58.441 50.000 0.00 0.00 43.98 4.02
3143 5404 0.527565 ACATTGATTCTGGCGGCAAC 59.472 50.000 14.48 5.68 0.00 4.17
3188 5449 0.536260 CTGAGCAGGTTCTCCCTCTG 59.464 60.000 0.00 0.00 43.86 3.35
3242 5503 1.281287 AGTGATGCTGACTGCCATCTT 59.719 47.619 1.50 0.00 42.00 2.40
3252 5513 2.165030 GACTGCCATCTTTCAACATGGG 59.835 50.000 0.00 0.00 40.16 4.00
3258 5519 4.142381 GCCATCTTTCAACATGGGACTTAC 60.142 45.833 0.00 0.00 40.16 2.34
3416 5742 3.622455 GCAGTTGCTTACCAGGTATTCCT 60.622 47.826 0.00 0.00 40.59 3.36
3424 6752 5.453480 GCTTACCAGGTATTCCTTCCTAGTG 60.453 48.000 0.00 0.00 43.07 2.74
3456 6784 3.822735 CTGAATTCTGAAGGCCAGTTTCA 59.177 43.478 5.01 5.52 43.38 2.69
3468 6796 1.000938 CCAGTTTCAGTTTCTGCTGGC 60.001 52.381 8.24 0.00 34.39 4.85
3481 6860 0.034756 TGCTGGCGAATGTACACTGT 59.965 50.000 0.00 0.00 0.00 3.55
3501 6880 5.533903 ACTGTTGCATTCTGAATTCTGAAGT 59.466 36.000 25.68 16.55 37.26 3.01
3505 6884 7.877612 TGTTGCATTCTGAATTCTGAAGTACTA 59.122 33.333 25.68 14.91 37.26 1.82
4087 7495 1.359848 CATGAGGAACTACACGGTGC 58.640 55.000 8.30 0.00 41.55 5.01
4095 7503 4.367023 TACACGGTGCGTCTGGGC 62.367 66.667 8.30 0.00 38.32 5.36
4138 7551 2.033299 AGCACCACAAATGTTCAGTTCG 59.967 45.455 0.00 0.00 0.00 3.95
4223 7649 6.567050 TCACCATACGAATAGTGGTAAGAAC 58.433 40.000 0.00 0.00 44.09 3.01
4266 7711 7.042335 AGCATGATTATTAATCCGGTAGTAGC 58.958 38.462 12.71 6.30 37.09 3.58
4268 7726 7.010552 GCATGATTATTAATCCGGTAGTAGCAG 59.989 40.741 12.71 0.00 37.09 4.24
4289 7747 4.082190 CAGTTCCAGTGATCTTCCTTCGTA 60.082 45.833 0.00 0.00 0.00 3.43
4405 7864 7.478520 ACTCAACGATGGTAATTAATGTAGC 57.521 36.000 0.00 0.00 0.00 3.58
4465 8205 7.164122 CCATATACTGAAACATACAGCCTGAT 58.836 38.462 0.00 0.00 38.74 2.90
4466 8206 7.663081 CCATATACTGAAACATACAGCCTGATT 59.337 37.037 0.00 0.00 38.74 2.57
4467 8207 9.710900 CATATACTGAAACATACAGCCTGATTA 57.289 33.333 0.00 0.00 38.74 1.75
4477 8217 7.260603 ACATACAGCCTGATTAAAATGCTTTC 58.739 34.615 0.00 0.00 0.00 2.62
4634 8374 3.414700 GCGCTCACCAGAACCACG 61.415 66.667 0.00 0.00 0.00 4.94
4651 8391 2.056577 CACGTTCTTCGAGGTTACCAC 58.943 52.381 3.51 0.00 42.86 4.16
4652 8392 1.000171 ACGTTCTTCGAGGTTACCACC 60.000 52.381 3.51 0.00 42.42 4.61
4653 8393 3.597023 ACGTTCTTCGAGGTTACCACCA 61.597 50.000 3.51 0.00 43.59 4.17
4654 8394 5.409890 ACGTTCTTCGAGGTTACCACCAG 62.410 52.174 3.51 0.00 43.59 4.00
4696 8453 5.351465 GCTGAACCGATGAACATCTCTTTTA 59.649 40.000 12.05 0.86 35.72 1.52
4699 8456 6.148811 TGAACCGATGAACATCTCTTTTAACC 59.851 38.462 12.05 0.00 35.72 2.85
4700 8457 5.556915 ACCGATGAACATCTCTTTTAACCA 58.443 37.500 12.05 0.00 35.72 3.67
4703 8460 6.402550 CCGATGAACATCTCTTTTAACCACTG 60.403 42.308 12.05 0.00 35.72 3.66
4704 8461 6.368791 CGATGAACATCTCTTTTAACCACTGA 59.631 38.462 12.05 0.00 35.72 3.41
4719 8481 4.013267 CCACTGAGATGGTTCTGAAACT 57.987 45.455 7.02 0.00 35.61 2.66
4720 8482 3.750130 CCACTGAGATGGTTCTGAAACTG 59.250 47.826 7.02 0.00 35.61 3.16
5127 8896 1.028330 CAGGCTCCGTTCATGCATGT 61.028 55.000 25.43 0.46 34.40 3.21
5257 9026 0.906282 TGACCATCTCCTCAGCAGCA 60.906 55.000 0.00 0.00 0.00 4.41
5265 9034 4.383861 CTCAGCAGCAGGACGCCA 62.384 66.667 0.00 0.00 44.04 5.69
5315 9084 3.592814 CGCCGAGATCGCCAGGTA 61.593 66.667 0.00 0.00 38.18 3.08
5316 9085 2.027751 GCCGAGATCGCCAGGTAC 59.972 66.667 0.00 0.00 38.18 3.34
5317 9086 2.782222 GCCGAGATCGCCAGGTACA 61.782 63.158 0.00 0.00 38.18 2.90
5318 9087 1.813859 CCGAGATCGCCAGGTACAA 59.186 57.895 0.00 0.00 38.18 2.41
5319 9088 0.527817 CCGAGATCGCCAGGTACAAC 60.528 60.000 0.00 0.00 38.18 3.32
5320 9089 0.172578 CGAGATCGCCAGGTACAACA 59.827 55.000 0.00 0.00 0.00 3.33
5321 9090 1.403647 CGAGATCGCCAGGTACAACAA 60.404 52.381 0.00 0.00 0.00 2.83
5322 9091 2.271800 GAGATCGCCAGGTACAACAAG 58.728 52.381 0.00 0.00 0.00 3.16
5323 9092 1.899814 AGATCGCCAGGTACAACAAGA 59.100 47.619 0.00 0.00 0.00 3.02
5324 9093 2.501723 AGATCGCCAGGTACAACAAGAT 59.498 45.455 0.00 0.00 0.00 2.40
5325 9094 2.380084 TCGCCAGGTACAACAAGATC 57.620 50.000 0.00 0.00 0.00 2.75
5326 9095 1.621317 TCGCCAGGTACAACAAGATCA 59.379 47.619 0.00 0.00 0.00 2.92
5327 9096 1.732259 CGCCAGGTACAACAAGATCAC 59.268 52.381 0.00 0.00 0.00 3.06
5328 9097 2.778299 GCCAGGTACAACAAGATCACA 58.222 47.619 0.00 0.00 0.00 3.58
5341 9110 2.519013 AGATCACAAGGTTTTGCTCCC 58.481 47.619 0.00 0.00 37.85 4.30
5357 9126 0.463654 TCCCGTGGATAGTGCAATGC 60.464 55.000 0.00 0.00 0.00 3.56
5366 9135 4.162131 TGGATAGTGCAATGCTACTGAAGA 59.838 41.667 16.56 2.01 0.00 2.87
5370 9139 2.346847 GTGCAATGCTACTGAAGACTCG 59.653 50.000 6.82 0.00 0.00 4.18
5508 9291 2.028203 TCACTCCGTTTGATGATCTGCA 60.028 45.455 0.00 0.00 0.00 4.41
5509 9292 2.094894 CACTCCGTTTGATGATCTGCAC 59.905 50.000 0.00 0.00 0.00 4.57
5510 9293 2.289631 ACTCCGTTTGATGATCTGCACA 60.290 45.455 0.00 0.00 0.00 4.57
5512 9295 2.743664 TCCGTTTGATGATCTGCACAAG 59.256 45.455 0.00 0.00 0.00 3.16
5513 9296 2.485426 CCGTTTGATGATCTGCACAAGT 59.515 45.455 0.00 0.00 0.00 3.16
5514 9297 3.058016 CCGTTTGATGATCTGCACAAGTT 60.058 43.478 0.00 0.00 0.00 2.66
5516 9299 4.319694 CGTTTGATGATCTGCACAAGTTGA 60.320 41.667 10.54 0.00 0.00 3.18
5525 9336 1.742831 TGCACAAGTTGACTGTGGAAC 59.257 47.619 10.54 0.00 34.44 3.62
5542 9353 3.896888 TGGAACCTTTGTTACTACTCCGA 59.103 43.478 0.00 0.00 36.19 4.55
5549 9360 6.210185 ACCTTTGTTACTACTCCGACTAATGT 59.790 38.462 0.00 0.00 0.00 2.71
5550 9361 6.530534 CCTTTGTTACTACTCCGACTAATGTG 59.469 42.308 0.00 0.00 0.00 3.21
5551 9362 6.579666 TTGTTACTACTCCGACTAATGTGT 57.420 37.500 0.00 0.00 0.00 3.72
5564 9375 5.564651 CGACTAATGTGTTTTTGGCCTGAAT 60.565 40.000 3.32 0.00 0.00 2.57
5565 9376 6.348950 CGACTAATGTGTTTTTGGCCTGAATA 60.349 38.462 3.32 0.00 0.00 1.75
5566 9377 6.687604 ACTAATGTGTTTTTGGCCTGAATAC 58.312 36.000 3.32 5.34 0.00 1.89
5567 9378 5.543507 AATGTGTTTTTGGCCTGAATACA 57.456 34.783 3.32 10.91 0.00 2.29
5568 9379 5.743636 ATGTGTTTTTGGCCTGAATACAT 57.256 34.783 16.74 16.74 32.55 2.29
5595 9406 9.368416 ACATACATATTCCTAGTAGTGTGTCAT 57.632 33.333 0.00 0.00 27.38 3.06
5599 9410 9.422681 ACATATTCCTAGTAGTGTGTCATTACT 57.577 33.333 9.22 9.22 39.55 2.24
5637 9448 1.404035 TGCATCATTAGCTTGCTGCAG 59.596 47.619 10.11 10.11 42.10 4.41
5647 9458 1.402456 GCTTGCTGCAGAGATTTGGTG 60.402 52.381 20.43 0.00 42.31 4.17
5702 9565 6.053650 TCCAATGATCTGATGACAGTGATTC 58.946 40.000 7.96 0.00 43.81 2.52
5729 9614 6.207417 TCTCTTGAAAATCACCAAACCTGATC 59.793 38.462 0.00 0.00 0.00 2.92
5760 9649 8.507249 GGATATGTTTATTTGGAGCATCTGTAC 58.493 37.037 0.00 0.00 33.73 2.90
5794 9700 2.012673 GGATGACACCAAGATGCTGAC 58.987 52.381 0.00 0.00 0.00 3.51
5819 9725 1.680735 GGACATGACACAGCCAAACAA 59.319 47.619 0.00 0.00 0.00 2.83
5831 9740 4.104776 CAGCCAAACAACACTAACACTTG 58.895 43.478 0.00 0.00 0.00 3.16
5882 9793 4.707934 TGATATGTACTGACAGAACCGGAA 59.292 41.667 9.46 0.00 39.50 4.30
5895 9806 2.871096 ACCGGAAACCAATTCTGCTA 57.129 45.000 9.46 0.00 42.18 3.49
5950 9861 7.694886 AGGCGCTAGAAGAAATAAACAAATAC 58.305 34.615 7.64 0.00 0.00 1.89
5963 9874 9.807649 AAATAAACAAATACAATCTCAGGATGC 57.192 29.630 0.00 0.00 34.76 3.91
5992 9906 7.310113 CGATATCAGGGGATATATTAGAAGGGC 60.310 44.444 3.12 0.00 44.77 5.19
5993 9907 5.305675 TCAGGGGATATATTAGAAGGGCT 57.694 43.478 0.00 0.00 0.00 5.19
5994 9908 5.032846 TCAGGGGATATATTAGAAGGGCTG 58.967 45.833 0.00 0.00 0.00 4.85
5995 9909 4.164988 CAGGGGATATATTAGAAGGGCTGG 59.835 50.000 0.00 0.00 0.00 4.85
6003 9917 0.771127 TAGAAGGGCTGGTTGTGCTT 59.229 50.000 0.00 0.00 0.00 3.91
6004 9918 0.538287 AGAAGGGCTGGTTGTGCTTC 60.538 55.000 0.00 0.00 0.00 3.86
6006 9920 2.203480 GGGCTGGTTGTGCTTCCA 60.203 61.111 0.00 0.00 0.00 3.53
6040 9954 3.147595 TCCTGGTCATCGCCTCGG 61.148 66.667 0.00 0.00 0.00 4.63
6094 10008 2.922503 TTGGCCCTCTGCACGAGA 60.923 61.111 0.00 0.00 42.62 4.04
6139 10053 0.620556 ACATCGGTGGCCTGAATTCT 59.379 50.000 3.32 0.00 0.00 2.40
6174 10088 3.713826 AAAATAGTTCCAAGGCTCCGA 57.286 42.857 0.00 0.00 0.00 4.55
6175 10089 3.933861 AAATAGTTCCAAGGCTCCGAT 57.066 42.857 0.00 0.00 0.00 4.18
6184 10098 5.304686 TCCAAGGCTCCGATGTTATTTAT 57.695 39.130 0.00 0.00 0.00 1.40
6189 10103 7.228706 CCAAGGCTCCGATGTTATTTATTTACT 59.771 37.037 0.00 0.00 0.00 2.24
6191 10105 6.935208 AGGCTCCGATGTTATTTATTTACTCC 59.065 38.462 0.00 0.00 0.00 3.85
6192 10106 6.708949 GGCTCCGATGTTATTTATTTACTCCA 59.291 38.462 0.00 0.00 0.00 3.86
6193 10107 7.390718 GGCTCCGATGTTATTTATTTACTCCAT 59.609 37.037 0.00 0.00 0.00 3.41
6194 10108 8.230486 GCTCCGATGTTATTTATTTACTCCATG 58.770 37.037 0.00 0.00 0.00 3.66
6195 10109 9.273016 CTCCGATGTTATTTATTTACTCCATGT 57.727 33.333 0.00 0.00 0.00 3.21
6213 10127 6.393990 TCCATGTATGTTTGGTTTTGTATGC 58.606 36.000 0.00 0.00 34.48 3.14
6225 10139 5.591877 TGGTTTTGTATGCCAAATTTGCTTT 59.408 32.000 12.92 1.89 42.45 3.51
6244 10158 4.393371 GCTTTAGATGGTTGAGTGAAGTCC 59.607 45.833 0.00 0.00 0.00 3.85
6245 10159 5.799213 CTTTAGATGGTTGAGTGAAGTCCT 58.201 41.667 0.00 0.00 0.00 3.85
6340 10254 2.044123 GATCCACCATCCTGTCCAAC 57.956 55.000 0.00 0.00 0.00 3.77
6352 10266 0.037790 TGTCCAACGCATCGATGTCA 60.038 50.000 25.47 11.10 0.00 3.58
6413 10327 1.555533 ACCTAGGCTTGGAGCTGTAAC 59.444 52.381 21.96 0.00 41.99 2.50
6434 10348 0.858583 CAAACAGTCACGCGATCACA 59.141 50.000 15.93 0.00 0.00 3.58
6472 10389 5.736951 TGCTAAATTTGTAAACATGCCCT 57.263 34.783 0.00 0.00 0.00 5.19
6477 10394 1.745232 TTGTAAACATGCCCTAGCCG 58.255 50.000 0.00 0.00 38.69 5.52
6494 10411 1.948611 GCCGAAAACTGGTCATGGCTA 60.949 52.381 0.00 0.00 38.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.550431 AGATCCGGCGGGTGATGG 61.550 66.667 27.98 0.00 33.83 3.51
13 14 2.280389 CAGATCCGGCGGGTGATG 60.280 66.667 27.98 16.37 33.83 3.07
14 15 3.550431 CCAGATCCGGCGGGTGAT 61.550 66.667 27.98 12.82 33.83 3.06
70 71 3.406200 CTGGTGGGGCTCTGGAGG 61.406 72.222 0.00 0.00 0.00 4.30
71 72 4.106925 GCTGGTGGGGCTCTGGAG 62.107 72.222 0.00 0.00 0.00 3.86
94 95 2.612251 CTCCTCTCCTCCTCCCCC 59.388 72.222 0.00 0.00 0.00 5.40
95 96 2.612251 CCTCCTCTCCTCCTCCCC 59.388 72.222 0.00 0.00 0.00 4.81
96 97 2.123033 GCCTCCTCTCCTCCTCCC 60.123 72.222 0.00 0.00 0.00 4.30
97 98 2.520741 CGCCTCCTCTCCTCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
98 99 1.826487 GTCGCCTCCTCTCCTCCTC 60.826 68.421 0.00 0.00 0.00 3.71
99 100 2.277404 GTCGCCTCCTCTCCTCCT 59.723 66.667 0.00 0.00 0.00 3.69
100 101 3.213402 CGTCGCCTCCTCTCCTCC 61.213 72.222 0.00 0.00 0.00 4.30
101 102 3.894947 GCGTCGCCTCCTCTCCTC 61.895 72.222 5.75 0.00 0.00 3.71
114 115 3.916392 CTGGTGACCTGTCGGCGTC 62.916 68.421 6.85 0.72 0.00 5.19
115 116 3.991051 CTGGTGACCTGTCGGCGT 61.991 66.667 6.85 0.00 0.00 5.68
116 117 4.742201 CCTGGTGACCTGTCGGCG 62.742 72.222 2.11 0.00 0.00 6.46
117 118 4.394712 CCCTGGTGACCTGTCGGC 62.395 72.222 2.11 0.00 0.00 5.54
118 119 3.706373 CCCCTGGTGACCTGTCGG 61.706 72.222 2.11 0.14 0.00 4.79
119 120 3.706373 CCCCCTGGTGACCTGTCG 61.706 72.222 2.11 0.00 0.00 4.35
120 121 4.035102 GCCCCCTGGTGACCTGTC 62.035 72.222 2.11 0.00 0.00 3.51
136 137 3.724914 CTTCCTTCCTCCGCCTCGC 62.725 68.421 0.00 0.00 0.00 5.03
137 138 2.496817 CTTCCTTCCTCCGCCTCG 59.503 66.667 0.00 0.00 0.00 4.63
138 139 2.188207 GCTTCCTTCCTCCGCCTC 59.812 66.667 0.00 0.00 0.00 4.70
139 140 3.403558 GGCTTCCTTCCTCCGCCT 61.404 66.667 0.00 0.00 37.76 5.52
140 141 4.840005 CGGCTTCCTTCCTCCGCC 62.840 72.222 0.00 0.00 35.20 6.13
141 142 4.840005 CCGGCTTCCTTCCTCCGC 62.840 72.222 0.00 0.00 40.49 5.54
142 143 3.075005 TCCGGCTTCCTTCCTCCG 61.075 66.667 0.00 0.00 41.41 4.63
143 144 2.904131 CTCCGGCTTCCTTCCTCC 59.096 66.667 0.00 0.00 0.00 4.30
144 145 2.185310 TTGCTCCGGCTTCCTTCCTC 62.185 60.000 0.00 0.00 39.59 3.71
145 146 1.779061 TTTGCTCCGGCTTCCTTCCT 61.779 55.000 0.00 0.00 39.59 3.36
146 147 1.303317 TTTGCTCCGGCTTCCTTCC 60.303 57.895 0.00 0.00 39.59 3.46
147 148 1.308783 CCTTTGCTCCGGCTTCCTTC 61.309 60.000 0.00 0.00 39.59 3.46
148 149 1.303643 CCTTTGCTCCGGCTTCCTT 60.304 57.895 0.00 0.00 39.59 3.36
149 150 2.352805 CCTTTGCTCCGGCTTCCT 59.647 61.111 0.00 0.00 39.59 3.36
150 151 3.443925 GCCTTTGCTCCGGCTTCC 61.444 66.667 0.00 0.00 42.98 3.46
151 152 2.205243 CTTGCCTTTGCTCCGGCTTC 62.205 60.000 0.00 0.00 46.42 3.86
152 153 2.203480 TTGCCTTTGCTCCGGCTT 60.203 55.556 0.00 0.00 46.42 4.35
153 154 2.674380 CTTGCCTTTGCTCCGGCT 60.674 61.111 0.00 0.00 46.42 5.52
154 155 4.426112 GCTTGCCTTTGCTCCGGC 62.426 66.667 0.00 4.13 46.46 6.13
155 156 3.752339 GGCTTGCCTTTGCTCCGG 61.752 66.667 4.11 0.00 38.71 5.14
156 157 4.107051 CGGCTTGCCTTTGCTCCG 62.107 66.667 10.12 0.00 38.46 4.63
157 158 3.752339 CCGGCTTGCCTTTGCTCC 61.752 66.667 10.12 0.00 38.71 4.70
158 159 4.426112 GCCGGCTTGCCTTTGCTC 62.426 66.667 22.15 0.00 38.71 4.26
227 228 2.203224 TAGCGGCTCTCTCCCTCG 60.203 66.667 5.39 0.00 0.00 4.63
228 229 2.548295 CGTAGCGGCTCTCTCCCTC 61.548 68.421 5.39 0.00 0.00 4.30
229 230 2.517402 CGTAGCGGCTCTCTCCCT 60.517 66.667 5.39 0.00 0.00 4.20
277 278 3.157949 CTTCCTCCCTCCCTCGCC 61.158 72.222 0.00 0.00 0.00 5.54
278 279 3.157949 CCTTCCTCCCTCCCTCGC 61.158 72.222 0.00 0.00 0.00 5.03
279 280 2.444895 CCCTTCCTCCCTCCCTCG 60.445 72.222 0.00 0.00 0.00 4.63
280 281 2.040359 CCCCTTCCTCCCTCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
281 282 4.439901 GCCCCTTCCTCCCTCCCT 62.440 72.222 0.00 0.00 0.00 4.20
282 283 4.760220 TGCCCCTTCCTCCCTCCC 62.760 72.222 0.00 0.00 0.00 4.30
283 284 3.093172 CTGCCCCTTCCTCCCTCC 61.093 72.222 0.00 0.00 0.00 4.30
284 285 2.041265 TCTGCCCCTTCCTCCCTC 59.959 66.667 0.00 0.00 0.00 4.30
285 286 2.041928 CTCTGCCCCTTCCTCCCT 59.958 66.667 0.00 0.00 0.00 4.20
286 287 3.093172 CCTCTGCCCCTTCCTCCC 61.093 72.222 0.00 0.00 0.00 4.30
287 288 3.093172 CCCTCTGCCCCTTCCTCC 61.093 72.222 0.00 0.00 0.00 4.30
288 289 2.041265 TCCCTCTGCCCCTTCCTC 59.959 66.667 0.00 0.00 0.00 3.71
289 290 2.285743 GTCCCTCTGCCCCTTCCT 60.286 66.667 0.00 0.00 0.00 3.36
290 291 3.787001 CGTCCCTCTGCCCCTTCC 61.787 72.222 0.00 0.00 0.00 3.46
291 292 3.787001 CCGTCCCTCTGCCCCTTC 61.787 72.222 0.00 0.00 0.00 3.46
312 313 4.832608 GGAACCCTAGTGCCGCCG 62.833 72.222 0.00 0.00 29.51 6.46
313 314 4.484872 GGGAACCCTAGTGCCGCC 62.485 72.222 2.17 0.00 43.81 6.13
370 371 2.686405 GTTTACATTGACGGATTCCCCC 59.314 50.000 0.00 0.00 0.00 5.40
371 372 3.617284 AGTTTACATTGACGGATTCCCC 58.383 45.455 0.00 0.00 0.00 4.81
372 373 5.180271 TGTAGTTTACATTGACGGATTCCC 58.820 41.667 0.00 0.00 32.89 3.97
373 374 6.730960 TTGTAGTTTACATTGACGGATTCC 57.269 37.500 0.00 0.00 38.68 3.01
374 375 6.741358 GCTTTGTAGTTTACATTGACGGATTC 59.259 38.462 0.00 0.00 38.68 2.52
375 376 6.608610 GCTTTGTAGTTTACATTGACGGATT 58.391 36.000 0.00 0.00 38.68 3.01
376 377 5.163893 CGCTTTGTAGTTTACATTGACGGAT 60.164 40.000 0.00 0.00 38.68 4.18
377 378 4.150980 CGCTTTGTAGTTTACATTGACGGA 59.849 41.667 0.00 0.00 38.68 4.69
378 379 4.391358 CGCTTTGTAGTTTACATTGACGG 58.609 43.478 0.00 0.00 38.68 4.79
379 380 3.838550 GCGCTTTGTAGTTTACATTGACG 59.161 43.478 0.00 0.00 38.68 4.35
380 381 4.611366 GTGCGCTTTGTAGTTTACATTGAC 59.389 41.667 9.73 0.00 38.68 3.18
395 396 0.800300 CCGTTTTGTGTGTGCGCTTT 60.800 50.000 9.73 0.00 0.00 3.51
431 432 7.299246 AGGCTCACTAAACTAAGTCTAACAA 57.701 36.000 0.00 0.00 0.00 2.83
432 433 6.912951 AGGCTCACTAAACTAAGTCTAACA 57.087 37.500 0.00 0.00 0.00 2.41
466 467 2.717390 ACATGCGCAAACCTATTACCA 58.283 42.857 17.11 0.00 0.00 3.25
468 469 7.589954 CCTATAAAACATGCGCAAACCTATTAC 59.410 37.037 17.11 0.00 0.00 1.89
472 473 4.336993 CCCTATAAAACATGCGCAAACCTA 59.663 41.667 17.11 2.86 0.00 3.08
473 474 3.130340 CCCTATAAAACATGCGCAAACCT 59.870 43.478 17.11 0.00 0.00 3.50
478 479 1.403679 GCACCCTATAAAACATGCGCA 59.596 47.619 14.96 14.96 0.00 6.09
479 480 2.119671 GCACCCTATAAAACATGCGC 57.880 50.000 0.00 0.00 0.00 6.09
484 485 6.040209 TCTCTAAACGCACCCTATAAAACA 57.960 37.500 0.00 0.00 0.00 2.83
492 493 5.104900 ACATTATCTTCTCTAAACGCACCCT 60.105 40.000 0.00 0.00 0.00 4.34
495 496 6.466097 GCAAACATTATCTTCTCTAAACGCAC 59.534 38.462 0.00 0.00 0.00 5.34
519 520 2.545946 CCTCTGCGGCTTATAAAAGAGC 59.454 50.000 0.00 0.00 37.97 4.09
523 524 3.813166 GCATACCTCTGCGGCTTATAAAA 59.187 43.478 0.00 0.00 35.61 1.52
524 525 3.399330 GCATACCTCTGCGGCTTATAAA 58.601 45.455 0.00 0.00 35.61 1.40
525 526 2.289444 GGCATACCTCTGCGGCTTATAA 60.289 50.000 0.00 0.00 43.23 0.98
526 527 1.275291 GGCATACCTCTGCGGCTTATA 59.725 52.381 0.00 0.00 43.23 0.98
527 528 0.035458 GGCATACCTCTGCGGCTTAT 59.965 55.000 0.00 0.00 43.23 1.73
528 529 1.334384 TGGCATACCTCTGCGGCTTA 61.334 55.000 0.00 0.00 43.23 3.09
529 530 2.190578 GGCATACCTCTGCGGCTT 59.809 61.111 0.00 0.00 43.23 4.35
534 535 1.373570 GTCAAGTGGCATACCTCTGC 58.626 55.000 0.00 0.00 39.73 4.26
535 536 1.645034 CGTCAAGTGGCATACCTCTG 58.355 55.000 0.00 0.00 39.73 3.35
540 541 1.084289 GGTTCCGTCAAGTGGCATAC 58.916 55.000 0.00 0.00 0.00 2.39
591 594 1.765314 GCAGGGTGATAGAGGTGTCAT 59.235 52.381 0.00 0.00 0.00 3.06
601 604 3.738982 CACGGATAAATGCAGGGTGATA 58.261 45.455 0.00 0.00 0.00 2.15
723 732 0.738389 CCACCGTTCAAACTTGCACT 59.262 50.000 0.00 0.00 0.00 4.40
727 736 2.525055 CACAACCACCGTTCAAACTTG 58.475 47.619 0.00 0.00 0.00 3.16
728 737 1.474879 CCACAACCACCGTTCAAACTT 59.525 47.619 0.00 0.00 0.00 2.66
786 795 3.007920 AGAGGGGGTGAGCTGCTG 61.008 66.667 7.01 0.00 0.00 4.41
787 796 2.686835 GAGAGGGGGTGAGCTGCT 60.687 66.667 0.00 0.00 0.00 4.24
788 797 2.686835 AGAGAGGGGGTGAGCTGC 60.687 66.667 0.00 0.00 0.00 5.25
789 798 2.063378 GGAGAGAGGGGGTGAGCTG 61.063 68.421 0.00 0.00 0.00 4.24
790 799 2.366570 GGAGAGAGGGGGTGAGCT 59.633 66.667 0.00 0.00 0.00 4.09
791 800 2.766229 GGGAGAGAGGGGGTGAGC 60.766 72.222 0.00 0.00 0.00 4.26
792 801 2.443016 CGGGAGAGAGGGGGTGAG 60.443 72.222 0.00 0.00 0.00 3.51
793 802 4.779733 GCGGGAGAGAGGGGGTGA 62.780 72.222 0.00 0.00 0.00 4.02
800 811 1.679153 GAGGAGTAAAGCGGGAGAGAG 59.321 57.143 0.00 0.00 0.00 3.20
809 820 4.109050 CTCTTGTCGATGAGGAGTAAAGC 58.891 47.826 0.00 0.00 0.00 3.51
822 833 1.299850 CGTGTGTGGCTCTTGTCGA 60.300 57.895 0.00 0.00 0.00 4.20
845 856 3.435186 GAGCTGGCGTTGGGAAGC 61.435 66.667 0.00 0.00 35.86 3.86
847 858 2.424842 AATGGAGCTGGCGTTGGGAA 62.425 55.000 0.00 0.00 0.00 3.97
849 860 2.361610 AATGGAGCTGGCGTTGGG 60.362 61.111 0.00 0.00 0.00 4.12
852 863 0.749454 GATGGAATGGAGCTGGCGTT 60.749 55.000 0.00 0.00 0.00 4.84
854 865 1.153107 TGATGGAATGGAGCTGGCG 60.153 57.895 0.00 0.00 0.00 5.69
1008 1036 3.053896 GGTTTTCCCAGCCCGTCG 61.054 66.667 0.00 0.00 0.00 5.12
1138 1166 2.693762 CCTGCAGACACGCCATTGG 61.694 63.158 17.39 0.00 0.00 3.16
1254 1282 1.201647 CGCTTCTCTTCCAGTCGGTTA 59.798 52.381 0.00 0.00 0.00 2.85
1266 1294 3.786635 AGATGAATTTACGCGCTTCTCT 58.213 40.909 5.73 6.72 0.00 3.10
1285 1313 3.055819 CAGCAAGTAACTAGCAGGGAAGA 60.056 47.826 0.00 0.00 0.00 2.87
1287 1315 2.637872 ACAGCAAGTAACTAGCAGGGAA 59.362 45.455 0.00 0.00 0.00 3.97
1297 1326 6.131544 TCTTCCAGAAAAACAGCAAGTAAC 57.868 37.500 0.00 0.00 0.00 2.50
1303 1332 4.518970 GGTACATCTTCCAGAAAAACAGCA 59.481 41.667 0.00 0.00 0.00 4.41
1315 1344 5.586643 GGAATTCACAAGAGGTACATCTTCC 59.413 44.000 19.37 12.31 37.43 3.46
1322 1355 7.454260 AAAATGAGGAATTCACAAGAGGTAC 57.546 36.000 7.93 0.00 38.99 3.34
1331 1365 9.912634 TGTCAGAAATAAAAATGAGGAATTCAC 57.087 29.630 7.93 1.44 38.99 3.18
1348 1382 4.713792 ACCTTGTTCTCCTGTCAGAAAT 57.286 40.909 0.00 0.00 34.11 2.17
1355 1389 3.456277 ACTTGAGAACCTTGTTCTCCTGT 59.544 43.478 25.89 21.58 43.14 4.00
1427 1461 1.548081 CCAAGACCAATGCCATCACA 58.452 50.000 0.00 0.00 0.00 3.58
1439 1473 1.229177 ACCCCCATTTGCCAAGACC 60.229 57.895 0.00 0.00 0.00 3.85
1464 1498 6.210078 GTGACAGGACATAGCATAGTACTTC 58.790 44.000 0.00 0.00 0.00 3.01
1468 1502 4.542697 TGGTGACAGGACATAGCATAGTA 58.457 43.478 0.00 0.00 35.01 1.82
1480 1514 3.855255 TGACTGAAATTGGTGACAGGA 57.145 42.857 0.00 0.00 44.54 3.86
1481 1515 4.136796 TCTTGACTGAAATTGGTGACAGG 58.863 43.478 0.00 0.00 44.54 4.00
1482 1516 5.756195 TTCTTGACTGAAATTGGTGACAG 57.244 39.130 0.00 0.00 44.54 3.51
1486 1520 7.594015 CAGAGATTTTCTTGACTGAAATTGGTG 59.406 37.037 0.00 0.00 36.07 4.17
1487 1521 7.255730 CCAGAGATTTTCTTGACTGAAATTGGT 60.256 37.037 0.00 0.00 36.07 3.67
1488 1522 7.040201 TCCAGAGATTTTCTTGACTGAAATTGG 60.040 37.037 0.00 0.00 36.07 3.16
1489 1523 7.879070 TCCAGAGATTTTCTTGACTGAAATTG 58.121 34.615 0.00 0.00 36.07 2.32
1490 1524 8.469309 TTCCAGAGATTTTCTTGACTGAAATT 57.531 30.769 0.00 0.00 36.07 1.82
1491 1525 8.469309 TTTCCAGAGATTTTCTTGACTGAAAT 57.531 30.769 0.00 0.00 36.07 2.17
1492 1526 7.880160 TTTCCAGAGATTTTCTTGACTGAAA 57.120 32.000 0.00 0.00 32.41 2.69
1534 1585 5.948992 ATCTACCACTTCTCTTTTGTTGC 57.051 39.130 0.00 0.00 0.00 4.17
1562 1616 1.694696 AGAGAGAAAAGGTGAACGCCT 59.305 47.619 0.67 0.67 41.41 5.52
1565 1619 3.005897 TCTGGAGAGAGAAAAGGTGAACG 59.994 47.826 0.00 0.00 0.00 3.95
1579 1633 1.959508 CAGGACCCTGACTCTGGAGAG 60.960 61.905 10.47 1.92 46.30 3.20
1649 1703 3.181482 TGTTCTCCTCGATGAAGCTGATC 60.181 47.826 0.00 0.00 0.00 2.92
1732 1786 8.279800 TCAACTTTCATGTTACATTGTTACTCG 58.720 33.333 7.39 0.00 0.00 4.18
1736 1790 8.855110 ACCATCAACTTTCATGTTACATTGTTA 58.145 29.630 0.00 0.00 0.00 2.41
1737 1791 7.725251 ACCATCAACTTTCATGTTACATTGTT 58.275 30.769 0.00 0.00 0.00 2.83
1738 1792 7.288810 ACCATCAACTTTCATGTTACATTGT 57.711 32.000 0.00 0.00 0.00 2.71
1739 1793 7.359431 GCAACCATCAACTTTCATGTTACATTG 60.359 37.037 0.00 0.00 0.00 2.82
1740 1794 6.646240 GCAACCATCAACTTTCATGTTACATT 59.354 34.615 0.00 0.00 0.00 2.71
1741 1795 6.158598 GCAACCATCAACTTTCATGTTACAT 58.841 36.000 0.00 0.00 0.00 2.29
1742 1796 5.508825 GGCAACCATCAACTTTCATGTTACA 60.509 40.000 0.00 0.00 0.00 2.41
1743 1797 4.923281 GGCAACCATCAACTTTCATGTTAC 59.077 41.667 0.00 0.00 0.00 2.50
1744 1798 4.832266 AGGCAACCATCAACTTTCATGTTA 59.168 37.500 0.00 0.00 37.17 2.41
1745 1799 3.642848 AGGCAACCATCAACTTTCATGTT 59.357 39.130 0.00 0.00 37.17 2.71
1746 1800 3.233507 AGGCAACCATCAACTTTCATGT 58.766 40.909 0.00 0.00 37.17 3.21
1747 1801 3.947910 AGGCAACCATCAACTTTCATG 57.052 42.857 0.00 0.00 37.17 3.07
1748 1802 3.007182 CCAAGGCAACCATCAACTTTCAT 59.993 43.478 0.00 0.00 37.17 2.57
1749 1803 2.364970 CCAAGGCAACCATCAACTTTCA 59.635 45.455 0.00 0.00 37.17 2.69
1750 1804 2.365293 ACCAAGGCAACCATCAACTTTC 59.635 45.455 0.00 0.00 37.17 2.62
1751 1805 2.397597 ACCAAGGCAACCATCAACTTT 58.602 42.857 0.00 0.00 37.17 2.66
1752 1806 2.086610 ACCAAGGCAACCATCAACTT 57.913 45.000 0.00 0.00 37.17 2.66
1753 1807 2.086610 AACCAAGGCAACCATCAACT 57.913 45.000 0.00 0.00 37.17 3.16
1754 1808 2.908688 AAACCAAGGCAACCATCAAC 57.091 45.000 0.00 0.00 37.17 3.18
1761 1815 5.904362 AGATCAGATTAAACCAAGGCAAC 57.096 39.130 0.00 0.00 0.00 4.17
1762 1816 6.009589 TCAAGATCAGATTAAACCAAGGCAA 58.990 36.000 0.00 0.00 0.00 4.52
1770 1824 6.366332 ACAGTCACGTCAAGATCAGATTAAAC 59.634 38.462 0.00 0.00 0.00 2.01
1775 1829 4.527509 AACAGTCACGTCAAGATCAGAT 57.472 40.909 0.00 0.00 0.00 2.90
1786 1840 1.468520 GCCATGCATAAACAGTCACGT 59.531 47.619 0.00 0.00 0.00 4.49
1787 1841 1.739466 AGCCATGCATAAACAGTCACG 59.261 47.619 0.00 0.00 0.00 4.35
1791 1845 1.203052 GCACAGCCATGCATAAACAGT 59.797 47.619 0.00 0.00 45.39 3.55
1792 1846 1.917273 GCACAGCCATGCATAAACAG 58.083 50.000 0.00 0.00 45.39 3.16
1845 1899 3.073062 GGTACCAATACAGAGGCATCCAT 59.927 47.826 7.15 0.00 32.40 3.41
1886 1940 1.004277 GGGACAATGTCACCAAGCCTA 59.996 52.381 15.86 0.00 33.68 3.93
1910 1964 3.187699 CTCGAGTAGCCGCGCATCT 62.188 63.158 8.75 5.86 33.58 2.90
1931 1985 8.076347 ATTGCCTGATCAATTTTGAGAGGATCT 61.076 37.037 18.67 5.37 40.19 2.75
1958 2012 4.336153 TGAATGGCATATGCAGTAAGTGTG 59.664 41.667 28.07 0.00 44.36 3.82
1960 2014 4.553351 CGTGAATGGCATATGCAGTAAGTG 60.553 45.833 28.07 9.73 44.36 3.16
1961 2015 3.561310 CGTGAATGGCATATGCAGTAAGT 59.439 43.478 28.07 10.39 44.36 2.24
1962 2016 3.607775 GCGTGAATGGCATATGCAGTAAG 60.608 47.826 28.07 13.67 44.36 2.34
1980 2034 5.295292 AGAACAATCTGATATCTTTGGCGTG 59.705 40.000 3.98 0.00 33.59 5.34
1994 2048 7.654520 ACCAAATCATTTTGACAGAACAATCTG 59.345 33.333 4.36 4.36 46.18 2.90
1995 2049 7.729116 ACCAAATCATTTTGACAGAACAATCT 58.271 30.769 0.19 0.00 44.11 2.40
2016 2092 4.410883 TGGTAAGAAACAGAAGGAGACCAA 59.589 41.667 0.00 0.00 31.69 3.67
2019 2095 6.043854 AGATGGTAAGAAACAGAAGGAGAC 57.956 41.667 0.00 0.00 0.00 3.36
2020 2096 6.043243 ACAAGATGGTAAGAAACAGAAGGAGA 59.957 38.462 0.00 0.00 0.00 3.71
2024 2100 7.872993 TGACTACAAGATGGTAAGAAACAGAAG 59.127 37.037 0.00 0.00 0.00 2.85
2029 2105 6.166982 AGCTGACTACAAGATGGTAAGAAAC 58.833 40.000 0.00 0.00 0.00 2.78
2031 2107 5.717178 AGAGCTGACTACAAGATGGTAAGAA 59.283 40.000 0.00 0.00 0.00 2.52
2033 2109 5.126222 TGAGAGCTGACTACAAGATGGTAAG 59.874 44.000 0.00 0.00 0.00 2.34
2034 2110 5.016831 TGAGAGCTGACTACAAGATGGTAA 58.983 41.667 0.00 0.00 0.00 2.85
2036 2112 3.194542 GTGAGAGCTGACTACAAGATGGT 59.805 47.826 0.00 0.00 0.00 3.55
2037 2113 3.446873 AGTGAGAGCTGACTACAAGATGG 59.553 47.826 0.00 0.00 0.00 3.51
2038 2114 4.422840 CAGTGAGAGCTGACTACAAGATG 58.577 47.826 0.00 0.00 38.70 2.90
2077 2155 2.281208 TCGCCGGTCCTTTTGGTG 60.281 61.111 1.90 0.00 41.38 4.17
2167 2245 3.125573 GCCGCCTTCCCGAAGAAC 61.126 66.667 6.01 0.00 40.79 3.01
2198 2276 1.150536 GGCCAACAACCTCTGTGGA 59.849 57.895 0.00 0.00 38.67 4.02
2212 2290 0.776810 TCACCTTCTGGAAATGGCCA 59.223 50.000 8.56 8.56 37.04 5.36
2244 2322 8.545325 TGCTTAGCACATGTGATCACATTATGT 61.545 37.037 33.68 27.51 40.99 2.29
2247 2325 5.184711 TGCTTAGCACATGTGATCACATTA 58.815 37.500 33.68 22.21 40.99 1.90
2362 2442 1.823899 GATCACCCCCACCGCAATC 60.824 63.158 0.00 0.00 0.00 2.67
2419 2499 0.979187 TGTTGATCCCCTCCCGGTAC 60.979 60.000 0.00 0.00 0.00 3.34
2482 2562 1.561250 CGTGACCGACAAAACCGTC 59.439 57.895 0.00 0.00 35.63 4.79
2530 2610 2.356125 GGCAATATCCAGACACACCTGT 60.356 50.000 0.00 0.00 32.43 4.00
2613 2694 1.615392 GCACCCTGCAAAGTTCAGAAT 59.385 47.619 0.00 0.00 44.26 2.40
2700 2781 1.133167 TGGTTGAGAGTGAGAGTCCCA 60.133 52.381 0.00 0.00 0.00 4.37
2703 2784 4.799564 AAGATGGTTGAGAGTGAGAGTC 57.200 45.455 0.00 0.00 0.00 3.36
2706 2787 3.444034 CGGTAAGATGGTTGAGAGTGAGA 59.556 47.826 0.00 0.00 0.00 3.27
3033 5288 4.021102 CCTGAGGAAAGAGCAGGTAAAA 57.979 45.455 0.00 0.00 43.25 1.52
3034 5289 3.703001 CCTGAGGAAAGAGCAGGTAAA 57.297 47.619 0.00 0.00 43.25 2.01
3039 5294 1.018226 CGTGCCTGAGGAAAGAGCAG 61.018 60.000 0.65 0.00 33.37 4.24
3041 5296 2.394563 GCGTGCCTGAGGAAAGAGC 61.395 63.158 0.65 0.00 0.00 4.09
3042 5297 2.097038 CGCGTGCCTGAGGAAAGAG 61.097 63.158 0.65 0.00 0.00 2.85
3043 5298 2.048222 CGCGTGCCTGAGGAAAGA 60.048 61.111 0.65 0.00 0.00 2.52
3068 5327 2.029649 CGGGAGAAAGTGAACTTCGGTA 60.030 50.000 0.00 0.00 34.61 4.02
3101 5362 1.207329 GTTATGGCCGTCCTCTTGTCT 59.793 52.381 0.00 0.00 0.00 3.41
3143 5404 1.228124 TTTGCTGACCCGGAACCAG 60.228 57.895 0.73 8.23 0.00 4.00
3188 5449 5.121454 CAGTGATGAACTTCTTCAGTAAGGC 59.879 44.000 12.44 0.79 39.83 4.35
3236 5497 5.009631 TGTAAGTCCCATGTTGAAAGATGG 58.990 41.667 11.35 11.35 46.40 3.51
3242 5503 7.504238 ACTGTAAATTGTAAGTCCCATGTTGAA 59.496 33.333 0.00 0.00 0.00 2.69
3252 5513 9.382244 GATGTTCAACACTGTAAATTGTAAGTC 57.618 33.333 0.00 0.00 0.00 3.01
3258 5519 8.509690 AGATCAGATGTTCAACACTGTAAATTG 58.490 33.333 15.44 0.00 32.74 2.32
3412 5738 6.667848 TCAGAATGTATGTCACTAGGAAGGAA 59.332 38.462 0.00 0.00 37.40 3.36
3416 5742 8.762645 AGAATTCAGAATGTATGTCACTAGGAA 58.237 33.333 8.44 0.00 37.40 3.36
3424 6752 6.238593 GGCCTTCAGAATTCAGAATGTATGTC 60.239 42.308 13.02 0.13 37.40 3.06
3456 6784 2.076863 GTACATTCGCCAGCAGAAACT 58.923 47.619 0.00 0.00 0.00 2.66
3481 6860 7.063426 CGTAGTACTTCAGAATTCAGAATGCAA 59.937 37.037 13.02 0.00 34.76 4.08
3793 7201 4.767255 CACCAGCTCCTCCACCGC 62.767 72.222 0.00 0.00 0.00 5.68
3945 7353 2.027024 GACACCGCGATGCCGATA 59.973 61.111 8.23 0.00 38.22 2.92
4095 7503 4.511246 ATGGCGTGGCATGGAGGG 62.511 66.667 8.23 0.00 0.00 4.30
4138 7551 3.153919 TCACAAGCAAATCCCAGTAACC 58.846 45.455 0.00 0.00 0.00 2.85
4223 7649 1.850441 GCTAATTGATTTGCTGCTGCG 59.150 47.619 11.21 0.00 43.34 5.18
4266 7711 3.257393 CGAAGGAAGATCACTGGAACTG 58.743 50.000 0.00 0.00 0.00 3.16
4268 7726 3.320673 ACGAAGGAAGATCACTGGAAC 57.679 47.619 0.00 0.00 0.00 3.62
4289 7747 2.159043 CCTGCAACCATACGAGTCAGAT 60.159 50.000 0.00 0.00 0.00 2.90
4405 7864 4.201891 GCATGGTAAAGTTCAGAGATGCTG 60.202 45.833 0.00 0.00 46.31 4.41
4455 8195 6.832520 TGAAAGCATTTTAATCAGGCTGTA 57.167 33.333 15.27 1.50 39.27 2.74
4457 8197 6.334989 TGATGAAAGCATTTTAATCAGGCTG 58.665 36.000 8.58 8.58 39.27 4.85
4465 8205 5.007034 TCGTCCCTGATGAAAGCATTTTAA 58.993 37.500 0.00 0.00 39.27 1.52
4466 8206 4.584874 TCGTCCCTGATGAAAGCATTTTA 58.415 39.130 0.00 0.00 39.27 1.52
4467 8207 3.420893 TCGTCCCTGATGAAAGCATTTT 58.579 40.909 0.00 0.00 39.27 1.82
4477 8217 0.947660 CGCCATGATCGTCCCTGATG 60.948 60.000 0.00 0.00 0.00 3.07
4562 8302 4.203076 CCGATGACGACCCCGGTC 62.203 72.222 0.00 3.62 42.66 4.79
4648 8388 1.618343 GGATGTTTGGGTTTCTGGTGG 59.382 52.381 0.00 0.00 0.00 4.61
4651 8391 2.299867 CCTTGGATGTTTGGGTTTCTGG 59.700 50.000 0.00 0.00 0.00 3.86
4652 8392 2.289010 GCCTTGGATGTTTGGGTTTCTG 60.289 50.000 0.00 0.00 0.00 3.02
4653 8393 1.970640 GCCTTGGATGTTTGGGTTTCT 59.029 47.619 0.00 0.00 0.00 2.52
4654 8394 1.970640 AGCCTTGGATGTTTGGGTTTC 59.029 47.619 0.00 0.00 0.00 2.78
4656 8396 1.133199 TCAGCCTTGGATGTTTGGGTT 60.133 47.619 4.77 0.00 0.00 4.11
4658 8398 1.273327 GTTCAGCCTTGGATGTTTGGG 59.727 52.381 4.77 0.00 0.00 4.12
4659 8399 1.273327 GGTTCAGCCTTGGATGTTTGG 59.727 52.381 4.77 0.00 0.00 3.28
4661 8401 1.202879 TCGGTTCAGCCTTGGATGTTT 60.203 47.619 4.77 0.00 34.25 2.83
4699 8456 3.188048 GCAGTTTCAGAACCATCTCAGTG 59.812 47.826 0.00 0.00 36.39 3.66
4700 8457 3.072184 AGCAGTTTCAGAACCATCTCAGT 59.928 43.478 0.00 0.00 36.39 3.41
4703 8460 2.161211 GCAGCAGTTTCAGAACCATCTC 59.839 50.000 0.00 0.00 36.39 2.75
4704 8461 2.157738 GCAGCAGTTTCAGAACCATCT 58.842 47.619 0.00 0.00 36.39 2.90
4709 8471 2.216898 AGACTGCAGCAGTTTCAGAAC 58.783 47.619 28.84 14.14 45.44 3.01
4718 8480 1.013005 CCGAAGTGAGACTGCAGCAG 61.013 60.000 21.54 21.54 37.52 4.24
4719 8481 1.005748 CCGAAGTGAGACTGCAGCA 60.006 57.895 15.27 0.06 0.00 4.41
4720 8482 1.739562 CCCGAAGTGAGACTGCAGC 60.740 63.158 15.27 6.85 0.00 5.25
4972 8741 0.679505 TGTAGAGCCATATGACGCCC 59.320 55.000 3.65 0.00 0.00 6.13
4998 8767 2.192443 CGAGCGGGAGGTAGGAGA 59.808 66.667 0.00 0.00 43.00 3.71
4999 8768 2.188161 GTCGAGCGGGAGGTAGGAG 61.188 68.421 0.00 0.00 43.00 3.69
5065 8834 2.035155 TTCCGGTCGAGGAGCAGA 59.965 61.111 0.00 0.00 41.98 4.26
5102 8871 0.036952 ATGAACGGAGCCTGTGACAG 60.037 55.000 5.42 5.42 0.00 3.51
5105 8874 1.375908 GCATGAACGGAGCCTGTGA 60.376 57.895 0.00 0.00 0.00 3.58
5107 8876 1.028330 CATGCATGAACGGAGCCTGT 61.028 55.000 22.59 0.00 0.00 4.00
5109 8878 0.745845 GACATGCATGAACGGAGCCT 60.746 55.000 32.75 7.05 0.00 4.58
5111 8880 0.376152 CAGACATGCATGAACGGAGC 59.624 55.000 32.75 11.91 0.00 4.70
5127 8896 2.369860 AGAGTGAATCAACAGGTGCAGA 59.630 45.455 0.00 0.00 0.00 4.26
5311 9080 4.706842 ACCTTGTGATCTTGTTGTACCT 57.293 40.909 0.00 0.00 0.00 3.08
5312 9081 5.767816 AAACCTTGTGATCTTGTTGTACC 57.232 39.130 0.00 0.00 0.00 3.34
5313 9082 5.458779 GCAAAACCTTGTGATCTTGTTGTAC 59.541 40.000 0.00 0.00 34.79 2.90
5314 9083 5.359576 AGCAAAACCTTGTGATCTTGTTGTA 59.640 36.000 0.00 0.00 34.79 2.41
5315 9084 4.160252 AGCAAAACCTTGTGATCTTGTTGT 59.840 37.500 0.00 0.00 34.79 3.32
5316 9085 4.685924 AGCAAAACCTTGTGATCTTGTTG 58.314 39.130 0.00 0.00 34.79 3.33
5317 9086 4.202151 GGAGCAAAACCTTGTGATCTTGTT 60.202 41.667 0.00 0.00 34.79 2.83
5318 9087 3.319122 GGAGCAAAACCTTGTGATCTTGT 59.681 43.478 0.00 0.00 34.79 3.16
5319 9088 3.305608 GGGAGCAAAACCTTGTGATCTTG 60.306 47.826 0.00 0.00 34.79 3.02
5320 9089 2.893489 GGGAGCAAAACCTTGTGATCTT 59.107 45.455 0.00 0.00 34.79 2.40
5321 9090 2.519013 GGGAGCAAAACCTTGTGATCT 58.481 47.619 0.00 0.00 34.79 2.75
5322 9091 1.200020 CGGGAGCAAAACCTTGTGATC 59.800 52.381 0.00 0.00 34.79 2.92
5323 9092 1.247567 CGGGAGCAAAACCTTGTGAT 58.752 50.000 0.00 0.00 34.79 3.06
5324 9093 0.106918 ACGGGAGCAAAACCTTGTGA 60.107 50.000 0.00 0.00 34.79 3.58
5325 9094 0.030638 CACGGGAGCAAAACCTTGTG 59.969 55.000 0.00 0.00 34.79 3.33
5326 9095 1.106944 CCACGGGAGCAAAACCTTGT 61.107 55.000 0.00 0.00 34.79 3.16
5327 9096 0.821711 TCCACGGGAGCAAAACCTTG 60.822 55.000 0.00 0.00 35.49 3.61
5328 9097 0.112412 ATCCACGGGAGCAAAACCTT 59.888 50.000 0.00 0.00 34.05 3.50
5341 9110 2.541346 CAGTAGCATTGCACTATCCACG 59.459 50.000 11.91 0.00 0.00 4.94
5357 9126 4.082679 ACCTTTGCTACGAGTCTTCAGTAG 60.083 45.833 0.00 6.69 40.40 2.57
5366 9135 4.280174 TCTTCAGTAACCTTTGCTACGAGT 59.720 41.667 0.00 0.00 0.00 4.18
5370 9139 7.203255 ACATTTCTTCAGTAACCTTTGCTAC 57.797 36.000 0.00 0.00 0.00 3.58
5508 9291 3.366052 AAGGTTCCACAGTCAACTTGT 57.634 42.857 0.00 0.00 0.00 3.16
5509 9292 3.443681 ACAAAGGTTCCACAGTCAACTTG 59.556 43.478 0.00 0.00 0.00 3.16
5510 9293 3.697166 ACAAAGGTTCCACAGTCAACTT 58.303 40.909 0.00 0.00 0.00 2.66
5512 9295 4.638865 AGTAACAAAGGTTCCACAGTCAAC 59.361 41.667 0.00 0.00 38.45 3.18
5513 9296 4.850680 AGTAACAAAGGTTCCACAGTCAA 58.149 39.130 0.00 0.00 38.45 3.18
5514 9297 4.497291 AGTAACAAAGGTTCCACAGTCA 57.503 40.909 0.00 0.00 38.45 3.41
5516 9299 5.454329 GGAGTAGTAACAAAGGTTCCACAGT 60.454 44.000 0.00 0.00 38.45 3.55
5525 9336 6.530534 CACATTAGTCGGAGTAGTAACAAAGG 59.469 42.308 0.00 0.00 0.00 3.11
5542 9353 5.806654 ATTCAGGCCAAAAACACATTAGT 57.193 34.783 5.01 0.00 0.00 2.24
5549 9360 6.849085 ATGTATGTATTCAGGCCAAAAACA 57.151 33.333 5.01 2.63 0.00 2.83
5550 9361 7.767261 TGTATGTATGTATTCAGGCCAAAAAC 58.233 34.615 5.01 0.00 0.00 2.43
5551 9362 7.946381 TGTATGTATGTATTCAGGCCAAAAA 57.054 32.000 5.01 0.00 0.00 1.94
5568 9379 9.856162 TGACACACTACTAGGAATATGTATGTA 57.144 33.333 0.00 0.00 0.00 2.29
5593 9404 8.793592 GCACCCTCCCTTATTTATTTAGTAATG 58.206 37.037 0.00 0.00 0.00 1.90
5595 9406 7.874252 TGCACCCTCCCTTATTTATTTAGTAA 58.126 34.615 0.00 0.00 0.00 2.24
5598 9409 7.004086 TGATGCACCCTCCCTTATTTATTTAG 58.996 38.462 0.00 0.00 0.00 1.85
5599 9410 6.916909 TGATGCACCCTCCCTTATTTATTTA 58.083 36.000 0.00 0.00 0.00 1.40
5600 9411 5.776358 TGATGCACCCTCCCTTATTTATTT 58.224 37.500 0.00 0.00 0.00 1.40
5601 9412 5.402054 TGATGCACCCTCCCTTATTTATT 57.598 39.130 0.00 0.00 0.00 1.40
5607 9418 2.106511 GCTAATGATGCACCCTCCCTTA 59.893 50.000 0.00 0.00 0.00 2.69
5637 9448 3.882888 TGAACCTGTTCACACCAAATCTC 59.117 43.478 8.58 0.00 43.90 2.75
5647 9458 6.258068 GCCATACTATTACTGAACCTGTTCAC 59.742 42.308 8.58 0.00 43.90 3.18
5666 9477 9.053840 CATCAGATCATTGGATATTAGCCATAC 57.946 37.037 0.67 0.00 34.90 2.39
5671 9482 7.823310 ACTGTCATCAGATCATTGGATATTAGC 59.177 37.037 0.00 0.00 43.76 3.09
5678 9494 5.625568 ATCACTGTCATCAGATCATTGGA 57.374 39.130 0.00 0.00 43.76 3.53
5687 9503 5.105432 TCAAGAGAGGAATCACTGTCATCAG 60.105 44.000 0.00 0.00 46.18 2.90
5702 9565 4.829492 AGGTTTGGTGATTTTCAAGAGAGG 59.171 41.667 0.00 0.00 0.00 3.69
5729 9614 5.539574 TGCTCCAAATAAACATATCCATGGG 59.460 40.000 13.02 0.00 36.39 4.00
5794 9700 0.877071 GGCTGTGTCATGTCCACAAG 59.123 55.000 17.41 13.49 41.91 3.16
5831 9740 6.250344 GGTTTCGCCTGATTTATTATACCC 57.750 41.667 0.00 0.00 0.00 3.69
5846 9755 2.356135 ACATATCACACAGGTTTCGCC 58.644 47.619 0.00 0.00 37.58 5.54
5882 9793 4.263905 TGGAGGAACATAGCAGAATTGGTT 60.264 41.667 0.00 0.00 36.27 3.67
5895 9806 2.757868 CGAGAGAAGAGTGGAGGAACAT 59.242 50.000 0.00 0.00 0.00 2.71
5950 9861 3.374506 TCGCAGCATCCTGAGATTG 57.625 52.632 0.00 0.00 41.96 2.67
5957 9868 0.612229 CCCTGATATCGCAGCATCCT 59.388 55.000 0.00 0.00 34.56 3.24
5959 9870 0.610174 TCCCCTGATATCGCAGCATC 59.390 55.000 0.00 0.00 34.56 3.91
5960 9871 1.283347 ATCCCCTGATATCGCAGCAT 58.717 50.000 0.00 0.00 34.56 3.79
5961 9872 1.937191 TATCCCCTGATATCGCAGCA 58.063 50.000 0.00 0.00 34.56 4.41
5962 9873 4.881019 ATATATCCCCTGATATCGCAGC 57.119 45.455 0.00 0.00 42.06 5.25
5963 9874 7.767250 TCTAATATATCCCCTGATATCGCAG 57.233 40.000 0.00 0.00 42.06 5.18
5992 9906 4.201657 TCATATGATGGAAGCACAACCAG 58.798 43.478 0.00 0.00 30.93 4.00
5993 9907 4.233632 TCATATGATGGAAGCACAACCA 57.766 40.909 0.00 0.00 30.93 3.67
5994 9908 5.581126 TTTCATATGATGGAAGCACAACC 57.419 39.130 6.17 0.00 30.93 3.77
5995 9909 6.040166 AGGATTTCATATGATGGAAGCACAAC 59.960 38.462 6.17 0.00 35.89 3.32
6003 9917 4.915809 AGGACCAGGATTTCATATGATGGA 59.084 41.667 23.17 7.62 0.00 3.41
6004 9918 5.008331 CAGGACCAGGATTTCATATGATGG 58.992 45.833 17.19 17.19 0.00 3.51
6006 9920 4.666907 ACCAGGACCAGGATTTCATATGAT 59.333 41.667 10.44 0.00 0.00 2.45
6049 9963 1.299468 GAAGATGCTCGACGGCGAT 60.299 57.895 16.81 0.00 46.80 4.58
6165 10079 7.444487 GGAGTAAATAAATAACATCGGAGCCTT 59.556 37.037 0.00 0.00 0.00 4.35
6184 10098 8.012957 ACAAAACCAAACATACATGGAGTAAA 57.987 30.769 0.00 0.00 39.12 2.01
6189 10103 6.393990 GCATACAAAACCAAACATACATGGA 58.606 36.000 0.00 0.00 39.12 3.41
6191 10105 6.162079 TGGCATACAAAACCAAACATACATG 58.838 36.000 0.00 0.00 0.00 3.21
6192 10106 6.352016 TGGCATACAAAACCAAACATACAT 57.648 33.333 0.00 0.00 0.00 2.29
6193 10107 5.791336 TGGCATACAAAACCAAACATACA 57.209 34.783 0.00 0.00 0.00 2.29
6213 10127 6.366877 CACTCAACCATCTAAAGCAAATTTGG 59.633 38.462 19.47 2.97 32.01 3.28
6225 10139 4.678256 AGAGGACTTCACTCAACCATCTA 58.322 43.478 0.00 0.00 37.43 1.98
6244 10158 1.338200 GCCTTGTGTGTCCAGGTAGAG 60.338 57.143 0.00 0.00 0.00 2.43
6245 10159 0.685097 GCCTTGTGTGTCCAGGTAGA 59.315 55.000 0.00 0.00 0.00 2.59
6274 10188 0.681564 AGTCTCTGTCCCGATTCGCT 60.682 55.000 0.00 0.00 0.00 4.93
6340 10254 0.599466 AGCTCCATGACATCGATGCG 60.599 55.000 25.11 11.02 0.00 4.73
6352 10266 3.474570 GCGTCTCCCCAGCTCCAT 61.475 66.667 0.00 0.00 0.00 3.41
6429 10343 6.236409 AGCAATTTATGATCCGAGATGTGAT 58.764 36.000 0.00 0.00 0.00 3.06
6434 10348 9.903682 CAAATTTAGCAATTTATGATCCGAGAT 57.096 29.630 0.00 0.00 40.09 2.75
6472 10389 1.948611 GCCATGACCAGTTTTCGGCTA 60.949 52.381 0.00 0.00 35.17 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.