Multiple sequence alignment - TraesCS4D01G298100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G298100 chr4D 100.000 5080 0 0 1 5080 467443097 467438018 0.000000e+00 9382.0
1 TraesCS4D01G298100 chr4D 90.826 109 10 0 4466 4574 63224499 63224607 4.100000e-31 147.0
2 TraesCS4D01G298100 chr4D 84.397 141 12 7 4439 4574 482160288 482160423 4.130000e-26 130.0
3 TraesCS4D01G298100 chr4A 92.096 2834 159 24 1500 4307 3442665 3445459 0.000000e+00 3932.0
4 TraesCS4D01G298100 chr4A 88.071 394 28 11 849 1229 3442007 3442394 2.790000e-122 449.0
5 TraesCS4D01G298100 chr4A 84.759 374 32 13 4707 5079 3445762 3446111 8.090000e-93 351.0
6 TraesCS4D01G298100 chr4A 93.220 236 16 0 1232 1467 3442429 3442664 1.050000e-91 348.0
7 TraesCS4D01G298100 chr4B 92.364 2737 147 32 1676 4394 585468362 585465670 0.000000e+00 3840.0
8 TraesCS4D01G298100 chr4B 89.925 804 57 14 859 1648 585469153 585468360 0.000000e+00 1014.0
9 TraesCS4D01G298100 chr4B 90.465 409 38 1 1 409 461189313 461189720 5.790000e-149 538.0
10 TraesCS4D01G298100 chr4B 92.265 362 27 1 404 765 461189758 461190118 3.510000e-141 512.0
11 TraesCS4D01G298100 chr4B 90.722 194 8 6 4887 5080 585465379 585465196 3.040000e-62 250.0
12 TraesCS4D01G298100 chr5B 92.910 409 25 2 1 409 631621696 631621292 4.380000e-165 592.0
13 TraesCS4D01G298100 chr5B 93.443 366 19 3 399 764 631621259 631620899 5.790000e-149 538.0
14 TraesCS4D01G298100 chr5D 91.687 409 30 2 1 409 502787041 502787445 9.550000e-157 564.0
15 TraesCS4D01G298100 chr5D 93.388 363 22 2 399 761 502787478 502787838 2.080000e-148 536.0
16 TraesCS4D01G298100 chr5D 95.575 113 4 1 4571 4682 521523803 521523691 4.040000e-41 180.0
17 TraesCS4D01G298100 chr5D 92.742 124 6 3 4574 4694 408792002 408791879 5.230000e-40 176.0
18 TraesCS4D01G298100 chr6B 92.371 367 26 2 399 764 543079164 543079529 5.830000e-144 521.0
19 TraesCS4D01G298100 chr6B 91.538 130 8 3 4575 4701 347421727 347421856 5.230000e-40 176.0
20 TraesCS4D01G298100 chr6B 91.339 127 8 3 4575 4698 458104527 458104653 2.430000e-38 171.0
21 TraesCS4D01G298100 chr7D 91.460 363 29 2 399 761 554512219 554512579 9.820000e-137 497.0
22 TraesCS4D01G298100 chr7D 90.736 367 32 2 399 765 554518492 554518856 5.910000e-134 488.0
23 TraesCS4D01G298100 chr7D 84.967 153 15 5 4433 4577 40694802 40694650 1.140000e-31 148.0
24 TraesCS4D01G298100 chr5A 90.710 366 30 2 399 764 66828444 66828083 7.650000e-133 484.0
25 TraesCS4D01G298100 chr5A 86.649 367 48 1 399 765 38124153 38124518 6.120000e-109 405.0
26 TraesCS4D01G298100 chr1A 86.501 363 48 1 399 761 387054753 387055114 1.020000e-106 398.0
27 TraesCS4D01G298100 chr1A 88.811 143 9 3 4442 4577 277640144 277640286 8.750000e-38 169.0
28 TraesCS4D01G298100 chr1B 81.507 292 36 4 4427 4701 558228418 558228128 1.840000e-54 224.0
29 TraesCS4D01G298100 chr1B 79.371 286 39 6 4435 4701 585938498 585938214 3.120000e-42 183.0
30 TraesCS4D01G298100 chr1B 91.406 128 7 2 4559 4685 594167313 594167437 6.760000e-39 172.0
31 TraesCS4D01G298100 chr7B 95.798 119 4 1 4566 4684 78694845 78694962 1.870000e-44 191.0
32 TraesCS4D01G298100 chr7B 87.500 144 11 4 4441 4577 710732167 710732024 5.260000e-35 159.0
33 TraesCS4D01G298100 chr7B 86.667 135 14 3 4442 4574 61759946 61760078 4.100000e-31 147.0
34 TraesCS4D01G298100 chr3B 87.273 165 20 1 4537 4701 753679488 753679651 2.410000e-43 187.0
35 TraesCS4D01G298100 chr3B 90.769 130 9 2 4575 4701 412358944 412358815 2.430000e-38 171.0
36 TraesCS4D01G298100 chr7A 87.413 143 11 5 4439 4574 727851121 727851263 1.890000e-34 158.0
37 TraesCS4D01G298100 chr6A 89.474 114 12 0 4466 4579 60733770 60733883 1.470000e-30 145.0
38 TraesCS4D01G298100 chr2A 86.029 136 12 3 4442 4570 119328393 119328258 6.860000e-29 139.0
39 TraesCS4D01G298100 chr3D 100.000 28 0 0 4435 4462 421374600 421374573 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G298100 chr4D 467438018 467443097 5079 True 9382.000000 9382 100.000000 1 5080 1 chr4D.!!$R1 5079
1 TraesCS4D01G298100 chr4A 3442007 3446111 4104 False 1270.000000 3932 89.536500 849 5079 4 chr4A.!!$F1 4230
2 TraesCS4D01G298100 chr4B 585465196 585469153 3957 True 1701.333333 3840 91.003667 859 5080 3 chr4B.!!$R1 4221
3 TraesCS4D01G298100 chr4B 461189313 461190118 805 False 525.000000 538 91.365000 1 765 2 chr4B.!!$F1 764
4 TraesCS4D01G298100 chr5B 631620899 631621696 797 True 565.000000 592 93.176500 1 764 2 chr5B.!!$R1 763
5 TraesCS4D01G298100 chr5D 502787041 502787838 797 False 550.000000 564 92.537500 1 761 2 chr5D.!!$F1 760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
755 799 0.108567 GCTCTCTGAAGTTCCCCGAC 60.109 60.0 0.00 0.00 0.00 4.79 F
1047 1095 0.248458 CTTCTCTTCTCTCTCGCCGC 60.248 60.0 0.00 0.00 0.00 6.53 F
1081 1140 0.614415 TAGCGGTTAGGGTTCCCGAA 60.614 55.0 0.85 0.59 44.41 4.30 F
2532 2636 0.471617 GTAGGCCTGGAGATGCACAT 59.528 55.0 17.99 0.00 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2236 2334 0.035725 CCATGAGAGCCTGTCAGCAA 60.036 55.0 0.00 0.0 34.23 3.91 R
2239 2337 0.035725 TTGCCATGAGAGCCTGTCAG 60.036 55.0 0.00 0.0 0.00 3.51 R
2951 3060 1.553706 ACCTACCAGTCTGTAACCGG 58.446 55.0 0.00 0.0 0.00 5.28 R
4141 4258 0.249676 TAAAACAGGCGCATCCGGTA 59.750 50.0 10.83 0.0 42.62 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.078143 ATTCTGGGAGGAAGCACGC 60.078 57.895 0.00 0.00 0.00 5.34
120 121 4.430765 TCCGAGAAAGACCGCGCC 62.431 66.667 0.00 0.00 0.00 6.53
132 133 1.221466 ACCGCGCCATAATCATCACG 61.221 55.000 0.00 0.00 0.00 4.35
203 204 0.108615 CAGATCGACCCTGCGAGTTT 60.109 55.000 4.03 0.00 44.26 2.66
258 259 1.552792 GAACTTCCTAGGCAGCAGACT 59.447 52.381 8.51 0.00 36.68 3.24
306 307 3.366679 GGTCTCCAGATGCAAACAACATG 60.367 47.826 0.00 0.00 0.00 3.21
322 323 9.247126 CAAACAACATGAAAATCAACACAGATA 57.753 29.630 0.00 0.00 0.00 1.98
343 344 1.472878 CCTCGATCAACTTCGGAGACA 59.527 52.381 0.00 0.00 39.56 3.41
351 352 0.322975 ACTTCGGAGACAGCATTGCT 59.677 50.000 5.03 5.03 40.77 3.91
382 383 0.694771 AGTGGCCAGATCAGCTTCAA 59.305 50.000 5.11 0.00 0.00 2.69
577 621 4.243007 TGCTTAGCTTTTCTTCCTTTGC 57.757 40.909 5.60 0.00 0.00 3.68
600 644 6.093357 TGCAATTCAACATGTAATAAGAGCGA 59.907 34.615 0.00 0.00 0.00 4.93
654 698 5.575957 GTGCTAGTACGCTTAATGTGACTA 58.424 41.667 0.00 0.00 0.00 2.59
661 705 5.578005 ACGCTTAATGTGACTAAGAGCTA 57.422 39.130 0.00 0.00 31.56 3.32
665 709 6.045955 GCTTAATGTGACTAAGAGCTAGCTT 58.954 40.000 20.42 6.41 0.00 3.74
679 723 3.052793 AGCTAGCTTGAGACTACCCCTAA 60.053 47.826 12.68 0.00 0.00 2.69
683 727 4.168883 AGCTTGAGACTACCCCTAACTTT 58.831 43.478 0.00 0.00 0.00 2.66
754 798 0.251832 AGCTCTCTGAAGTTCCCCGA 60.252 55.000 0.00 0.00 0.00 5.14
755 799 0.108567 GCTCTCTGAAGTTCCCCGAC 60.109 60.000 0.00 0.00 0.00 4.79
756 800 1.257743 CTCTCTGAAGTTCCCCGACA 58.742 55.000 0.00 0.00 0.00 4.35
757 801 1.618837 CTCTCTGAAGTTCCCCGACAA 59.381 52.381 0.00 0.00 0.00 3.18
758 802 2.037251 CTCTCTGAAGTTCCCCGACAAA 59.963 50.000 0.00 0.00 0.00 2.83
759 803 2.436542 TCTCTGAAGTTCCCCGACAAAA 59.563 45.455 0.00 0.00 0.00 2.44
760 804 3.118186 TCTCTGAAGTTCCCCGACAAAAA 60.118 43.478 0.00 0.00 0.00 1.94
761 805 3.211045 TCTGAAGTTCCCCGACAAAAAG 58.789 45.455 0.00 0.00 0.00 2.27
762 806 3.118186 TCTGAAGTTCCCCGACAAAAAGA 60.118 43.478 0.00 0.00 0.00 2.52
763 807 3.622630 TGAAGTTCCCCGACAAAAAGAA 58.377 40.909 0.00 0.00 0.00 2.52
764 808 3.630312 TGAAGTTCCCCGACAAAAAGAAG 59.370 43.478 0.00 0.00 0.00 2.85
765 809 2.583143 AGTTCCCCGACAAAAAGAAGG 58.417 47.619 0.00 0.00 0.00 3.46
766 810 2.173996 AGTTCCCCGACAAAAAGAAGGA 59.826 45.455 0.00 0.00 0.00 3.36
767 811 2.552743 GTTCCCCGACAAAAAGAAGGAG 59.447 50.000 0.00 0.00 0.00 3.69
768 812 1.772453 TCCCCGACAAAAAGAAGGAGT 59.228 47.619 0.00 0.00 0.00 3.85
769 813 2.974099 TCCCCGACAAAAAGAAGGAGTA 59.026 45.455 0.00 0.00 0.00 2.59
770 814 3.585732 TCCCCGACAAAAAGAAGGAGTAT 59.414 43.478 0.00 0.00 0.00 2.12
771 815 4.778958 TCCCCGACAAAAAGAAGGAGTATA 59.221 41.667 0.00 0.00 0.00 1.47
772 816 5.248934 TCCCCGACAAAAAGAAGGAGTATAA 59.751 40.000 0.00 0.00 0.00 0.98
773 817 5.941647 CCCCGACAAAAAGAAGGAGTATAAA 59.058 40.000 0.00 0.00 0.00 1.40
774 818 6.431852 CCCCGACAAAAAGAAGGAGTATAAAA 59.568 38.462 0.00 0.00 0.00 1.52
775 819 7.303261 CCCGACAAAAAGAAGGAGTATAAAAC 58.697 38.462 0.00 0.00 0.00 2.43
776 820 7.040961 CCCGACAAAAAGAAGGAGTATAAAACA 60.041 37.037 0.00 0.00 0.00 2.83
777 821 8.347035 CCGACAAAAAGAAGGAGTATAAAACAA 58.653 33.333 0.00 0.00 0.00 2.83
778 822 9.724839 CGACAAAAAGAAGGAGTATAAAACAAA 57.275 29.630 0.00 0.00 0.00 2.83
781 825 9.476202 CAAAAAGAAGGAGTATAAAACAAAGGG 57.524 33.333 0.00 0.00 0.00 3.95
782 826 9.429109 AAAAAGAAGGAGTATAAAACAAAGGGA 57.571 29.630 0.00 0.00 0.00 4.20
783 827 8.637196 AAAGAAGGAGTATAAAACAAAGGGAG 57.363 34.615 0.00 0.00 0.00 4.30
784 828 7.331089 AGAAGGAGTATAAAACAAAGGGAGT 57.669 36.000 0.00 0.00 0.00 3.85
785 829 8.445361 AGAAGGAGTATAAAACAAAGGGAGTA 57.555 34.615 0.00 0.00 0.00 2.59
786 830 9.059023 AGAAGGAGTATAAAACAAAGGGAGTAT 57.941 33.333 0.00 0.00 0.00 2.12
787 831 9.682465 GAAGGAGTATAAAACAAAGGGAGTATT 57.318 33.333 0.00 0.00 0.00 1.89
816 860 8.561738 TTTTCTTAAGATGGACAATGGAGTAC 57.438 34.615 5.89 0.00 0.00 2.73
817 861 6.867519 TCTTAAGATGGACAATGGAGTACA 57.132 37.500 0.00 0.00 36.63 2.90
818 862 7.437713 TCTTAAGATGGACAATGGAGTACAT 57.562 36.000 0.00 0.00 45.58 2.29
829 873 1.876799 TGGAGTACATTTGTTGGCACG 59.123 47.619 0.00 0.00 0.00 5.34
830 874 1.877443 GGAGTACATTTGTTGGCACGT 59.123 47.619 0.00 0.00 0.00 4.49
831 875 3.068560 GGAGTACATTTGTTGGCACGTA 58.931 45.455 0.00 0.00 0.00 3.57
832 876 3.124636 GGAGTACATTTGTTGGCACGTAG 59.875 47.826 0.00 0.00 0.00 3.51
833 877 3.991773 GAGTACATTTGTTGGCACGTAGA 59.008 43.478 0.00 0.00 0.00 2.59
834 878 3.744426 AGTACATTTGTTGGCACGTAGAC 59.256 43.478 0.00 0.00 0.00 2.59
835 879 1.529438 ACATTTGTTGGCACGTAGACG 59.471 47.619 0.00 0.00 46.33 4.18
836 880 0.515564 ATTTGTTGGCACGTAGACGC 59.484 50.000 1.14 0.00 44.43 5.19
837 881 1.823260 TTTGTTGGCACGTAGACGCG 61.823 55.000 3.53 3.53 44.43 6.01
838 882 2.732094 GTTGGCACGTAGACGCGT 60.732 61.111 13.85 13.85 46.88 6.01
839 883 1.442520 GTTGGCACGTAGACGCGTA 60.443 57.895 13.97 0.00 43.83 4.42
840 884 1.154169 TTGGCACGTAGACGCGTAG 60.154 57.895 13.97 6.86 43.83 3.51
841 885 2.277756 GGCACGTAGACGCGTAGG 60.278 66.667 13.97 5.86 43.83 3.18
842 886 2.482374 GCACGTAGACGCGTAGGT 59.518 61.111 13.97 6.64 43.83 3.08
843 887 1.866496 GCACGTAGACGCGTAGGTG 60.866 63.158 23.53 23.53 43.83 4.00
844 888 1.866496 CACGTAGACGCGTAGGTGC 60.866 63.158 13.97 2.35 43.83 5.01
845 889 2.327343 ACGTAGACGCGTAGGTGCA 61.327 57.895 13.97 0.00 43.83 4.57
846 890 1.154169 CGTAGACGCGTAGGTGCAA 60.154 57.895 13.97 0.00 34.15 4.08
847 891 1.132199 CGTAGACGCGTAGGTGCAAG 61.132 60.000 13.97 0.00 34.15 4.01
853 897 0.438830 CGCGTAGGTGCAAGACTTTC 59.561 55.000 0.00 0.00 34.15 2.62
855 899 1.068474 CGTAGGTGCAAGACTTTCGG 58.932 55.000 0.00 0.00 0.00 4.30
868 912 4.324267 AGACTTTCGGGGAAATACAAGTG 58.676 43.478 0.00 0.00 30.85 3.16
873 917 6.598064 ACTTTCGGGGAAATACAAGTGAATAG 59.402 38.462 0.00 0.00 30.85 1.73
874 918 5.943349 TCGGGGAAATACAAGTGAATAGA 57.057 39.130 0.00 0.00 0.00 1.98
877 921 6.155565 TCGGGGAAATACAAGTGAATAGAGAA 59.844 38.462 0.00 0.00 0.00 2.87
889 933 6.998802 AGTGAATAGAGAAGGGCATATGTAC 58.001 40.000 4.29 0.00 0.00 2.90
961 1006 2.108970 GGATAACCGAGGGACTGAAGT 58.891 52.381 0.00 0.00 41.55 3.01
991 1036 2.622962 GCGAACCCGGAAACCCTTG 61.623 63.158 0.73 0.00 36.06 3.61
1002 1047 1.187567 AAACCCTTGCAGCCATCACC 61.188 55.000 0.00 0.00 0.00 4.02
1010 1055 2.367512 AGCCATCACCTCCCCTCC 60.368 66.667 0.00 0.00 0.00 4.30
1011 1056 2.367512 GCCATCACCTCCCCTCCT 60.368 66.667 0.00 0.00 0.00 3.69
1012 1057 2.447714 GCCATCACCTCCCCTCCTC 61.448 68.421 0.00 0.00 0.00 3.71
1013 1058 1.768077 CCATCACCTCCCCTCCTCC 60.768 68.421 0.00 0.00 0.00 4.30
1017 1065 2.882143 ACCTCCCCTCCTCCCCTT 60.882 66.667 0.00 0.00 0.00 3.95
1035 1083 3.825160 TTGCGCCGCCACTTCTCTT 62.825 57.895 6.63 0.00 0.00 2.85
1037 1085 2.262915 CGCCGCCACTTCTCTTCT 59.737 61.111 0.00 0.00 0.00 2.85
1041 1089 1.181786 CCGCCACTTCTCTTCTCTCT 58.818 55.000 0.00 0.00 0.00 3.10
1045 1093 1.134175 CCACTTCTCTTCTCTCTCGCC 59.866 57.143 0.00 0.00 0.00 5.54
1046 1094 1.091537 ACTTCTCTTCTCTCTCGCCG 58.908 55.000 0.00 0.00 0.00 6.46
1047 1095 0.248458 CTTCTCTTCTCTCTCGCCGC 60.248 60.000 0.00 0.00 0.00 6.53
1049 1097 3.132481 CTCTTCTCTCTCGCCGCCC 62.132 68.421 0.00 0.00 0.00 6.13
1050 1098 4.214327 CTTCTCTCTCGCCGCCCC 62.214 72.222 0.00 0.00 0.00 5.80
1063 1111 2.524394 GCCCCCTCGATCCAGCTA 60.524 66.667 0.00 0.00 0.00 3.32
1064 1112 2.578714 GCCCCCTCGATCCAGCTAG 61.579 68.421 0.00 0.00 0.00 3.42
1079 1138 1.440476 CTAGCGGTTAGGGTTCCCG 59.560 63.158 0.00 0.00 44.46 5.14
1081 1140 0.614415 TAGCGGTTAGGGTTCCCGAA 60.614 55.000 0.85 0.59 44.41 4.30
1082 1141 1.003476 GCGGTTAGGGTTCCCGAAA 60.003 57.895 5.06 0.48 44.41 3.46
1196 1255 2.052157 CTCGAGGTCTTTGTCAACGAC 58.948 52.381 12.58 12.58 0.00 4.34
1229 1288 3.782443 CCCGAGGCGCCTTTACCT 61.782 66.667 33.34 6.93 39.65 3.08
1269 1360 2.258726 GCAGGTTCCGTGGTTGGTC 61.259 63.158 0.00 0.00 0.00 4.02
1307 1398 3.254060 CTGTCTGGTGTTAACGATGGAG 58.746 50.000 0.26 0.00 0.00 3.86
1353 1444 0.661020 GTTGGCGTGCTAAACTGTGT 59.339 50.000 0.00 0.00 0.00 3.72
1357 1448 1.574428 CGTGCTAAACTGTGTGGCC 59.426 57.895 3.72 0.00 0.00 5.36
1378 1469 3.405831 CTTGTCAGATGGAAGCAGTTCA 58.594 45.455 0.00 0.00 33.93 3.18
1427 1518 4.575885 AGCAGTATTTTCGTCTTTGCCTA 58.424 39.130 0.00 0.00 0.00 3.93
1438 1529 3.248602 CGTCTTTGCCTATGGATTGTAGC 59.751 47.826 0.00 0.00 0.00 3.58
1467 1558 3.834231 AGTTGCCCGGAGTAGTAAACTTA 59.166 43.478 0.73 0.00 39.07 2.24
1471 1562 3.778618 CCCGGAGTAGTAAACTTAGTGC 58.221 50.000 0.73 0.00 39.07 4.40
1473 1564 4.421948 CCGGAGTAGTAAACTTAGTGCTG 58.578 47.826 0.00 0.00 39.07 4.41
1509 1600 2.565841 GTGGCTGGGCTTATCAGTTAG 58.434 52.381 0.00 0.00 34.89 2.34
1511 1602 3.134081 GTGGCTGGGCTTATCAGTTAGTA 59.866 47.826 0.00 0.00 34.89 1.82
1517 1608 6.174720 TGGGCTTATCAGTTAGTAATCAGG 57.825 41.667 0.00 0.00 0.00 3.86
1553 1646 4.602340 AGTGTGTACTTTGTAGTCTGGG 57.398 45.455 0.00 0.00 35.78 4.45
1560 1654 2.305927 ACTTTGTAGTCTGGGGGTCATG 59.694 50.000 0.00 0.00 0.00 3.07
1638 1732 1.881973 TGCAATTGCTGTCTGAACTCC 59.118 47.619 29.37 0.00 42.66 3.85
1793 1890 3.618594 ACACATACAGCACGCTTAATCTG 59.381 43.478 0.00 0.00 0.00 2.90
1810 1907 5.824904 AATCTGTTGATTGATACAGTGGC 57.175 39.130 0.00 0.00 41.00 5.01
1814 1911 4.002982 TGTTGATTGATACAGTGGCTGTC 58.997 43.478 4.95 0.00 41.21 3.51
1816 1913 2.205074 GATTGATACAGTGGCTGTCCG 58.795 52.381 4.95 0.00 41.21 4.79
1831 1928 3.458189 CTGTCCGGCCTGTTAAATCTAG 58.542 50.000 0.00 0.00 0.00 2.43
1832 1929 2.835764 TGTCCGGCCTGTTAAATCTAGT 59.164 45.455 0.00 0.00 0.00 2.57
1833 1930 4.025360 TGTCCGGCCTGTTAAATCTAGTA 58.975 43.478 0.00 0.00 0.00 1.82
1889 1986 3.665790 TGCGCACAAGCATGCTAA 58.334 50.000 23.00 0.00 43.80 3.09
1890 1987 1.209898 TGCGCACAAGCATGCTAAC 59.790 52.632 23.00 9.76 43.80 2.34
1891 1988 1.209898 GCGCACAAGCATGCTAACA 59.790 52.632 23.00 0.00 43.80 2.41
1898 1995 4.687483 GCACAAGCATGCTAACATCTTTTT 59.313 37.500 23.00 0.00 42.62 1.94
1926 2023 6.894654 TCACCCCATATGTTATGTCATGTTTT 59.105 34.615 1.24 0.00 0.00 2.43
2034 2131 4.497507 GCCTTTACCAGGTAAAATCGCATC 60.498 45.833 22.70 6.28 46.07 3.91
2056 2153 3.819337 CTGCATATGAACCATTGCTAGCT 59.181 43.478 17.23 0.00 32.98 3.32
2066 2163 4.978099 ACCATTGCTAGCTGTATTATGCT 58.022 39.130 17.23 0.00 42.67 3.79
2073 2170 5.406477 TGCTAGCTGTATTATGCTTCGATTG 59.594 40.000 17.23 0.00 40.35 2.67
2130 2228 0.886490 AGCCAGAAAGGTTGAGCGTG 60.886 55.000 0.00 0.00 40.61 5.34
2154 2252 5.531634 CAAATTGTAGCCCGCATATTGATT 58.468 37.500 0.00 0.00 0.00 2.57
2233 2331 5.010012 GGTTCATTCTCAACTTCCACACATT 59.990 40.000 0.00 0.00 0.00 2.71
2236 2334 7.111247 TCATTCTCAACTTCCACACATTTTT 57.889 32.000 0.00 0.00 0.00 1.94
2318 2419 2.993899 CCTGAACACGTGGTATGAGAAC 59.006 50.000 21.57 0.00 0.00 3.01
2333 2434 2.439507 TGAGAACTTTGTCCTGCTTCCT 59.560 45.455 0.00 0.00 0.00 3.36
2461 2565 9.726232 CGATTTAGATGTGAATGTTCATTGATT 57.274 29.630 2.63 0.00 39.73 2.57
2532 2636 0.471617 GTAGGCCTGGAGATGCACAT 59.528 55.000 17.99 0.00 0.00 3.21
2542 2646 6.404403 GCCTGGAGATGCACATTATCATAATG 60.404 42.308 14.85 14.85 0.00 1.90
2576 2680 9.202273 GACTTCTAGTTGATGGAATAAGCATAG 57.798 37.037 0.00 0.00 0.00 2.23
2611 2715 6.954487 ATAAGCTCATTTGCAGATCAATGA 57.046 33.333 10.34 10.34 34.12 2.57
2620 2724 2.621526 TGCAGATCAATGACATCATGCC 59.378 45.455 0.00 0.00 36.56 4.40
2664 2772 4.508662 GAAGTATCCCTTCTGGTCACTTG 58.491 47.826 0.00 0.00 45.19 3.16
2665 2773 2.237392 AGTATCCCTTCTGGTCACTTGC 59.763 50.000 0.00 0.00 34.77 4.01
2778 2887 1.423584 TCTCCTGAACTGTTCTGCCA 58.576 50.000 20.18 8.95 0.00 4.92
2782 2891 4.225942 TCTCCTGAACTGTTCTGCCATTAT 59.774 41.667 20.18 0.00 0.00 1.28
2879 2988 3.771577 CCTGGAGGTACACACTTTCTT 57.228 47.619 0.00 0.00 0.00 2.52
2913 3022 7.901029 TGAGTAATCTATGGATGCCTAAGAAG 58.099 38.462 0.00 0.00 31.75 2.85
2953 3062 5.811399 TGATTGCTAACCTTGATTAACCG 57.189 39.130 0.00 0.00 0.00 4.44
3069 3179 1.608283 GGAGCTTCGTTGGCAGTACTT 60.608 52.381 0.00 0.00 0.00 2.24
3104 3214 2.275318 GACTTGGCAGTATGAGTGCTC 58.725 52.381 6.27 0.00 43.82 4.26
3140 3250 2.204463 TGCCCACATAGGATTCCTGAA 58.796 47.619 15.80 0.00 41.22 3.02
3157 3267 3.244976 CTGAATTTTGAACCATGTCCGC 58.755 45.455 0.00 0.00 0.00 5.54
3185 3296 9.748708 TTTTCTTTCATTTGTTATCAGACTTGG 57.251 29.630 0.00 0.00 0.00 3.61
3186 3297 8.463930 TTCTTTCATTTGTTATCAGACTTGGT 57.536 30.769 0.00 0.00 0.00 3.67
3187 3298 8.099364 TCTTTCATTTGTTATCAGACTTGGTC 57.901 34.615 0.00 0.00 0.00 4.02
3200 3311 4.385825 AGACTTGGTCTGATTTACGCAAA 58.614 39.130 0.00 0.00 41.76 3.68
3228 3340 7.542130 GCAGATTTTCTGGTTTACTGTATTTGG 59.458 37.037 6.64 0.00 44.43 3.28
3273 3385 2.168521 GCCCCCTTTTTCATTAGCCTTC 59.831 50.000 0.00 0.00 0.00 3.46
3312 3424 9.258826 TGCATTTACATGGCATATTTATTTCAC 57.741 29.630 0.00 0.00 31.58 3.18
3313 3425 8.711457 GCATTTACATGGCATATTTATTTCACC 58.289 33.333 0.00 0.00 0.00 4.02
3314 3426 9.985730 CATTTACATGGCATATTTATTTCACCT 57.014 29.630 0.00 0.00 0.00 4.00
3350 3462 7.719871 TTTCTAGCTGACTAGGTGTCTTATT 57.280 36.000 0.00 0.00 45.20 1.40
3478 3592 5.134202 TGAAGTGTTACTGACATCGTGAT 57.866 39.130 0.00 0.00 41.10 3.06
3480 3594 5.633601 TGAAGTGTTACTGACATCGTGATTC 59.366 40.000 0.00 0.00 41.10 2.52
3594 3709 7.285858 AGCCGAGGTAAGATATGTATCCTTATC 59.714 40.741 0.00 0.00 33.17 1.75
3770 3885 1.154093 CTTTGCTGATGTGCCTGCG 60.154 57.895 0.00 0.00 34.31 5.18
3776 3891 1.725641 CTGATGTGCCTGCGACTTAA 58.274 50.000 0.00 0.00 0.00 1.85
3808 3923 0.597568 TCAACATTGAAGGGCTTGCG 59.402 50.000 0.00 0.00 33.55 4.85
3865 3980 1.846439 GGATGGGTCATTGAGAAGGGA 59.154 52.381 0.00 0.00 0.00 4.20
3866 3981 2.444766 GGATGGGTCATTGAGAAGGGAT 59.555 50.000 0.00 0.00 0.00 3.85
4019 4134 4.840271 TGATCAGATTGACATCAAGCACT 58.160 39.130 12.07 3.48 44.03 4.40
4067 4184 5.388599 CCACTGAGGGGGTTTAATAGAAT 57.611 43.478 0.00 0.00 0.00 2.40
4133 4250 4.265893 TGTATGGTGTACCGCATTTTGAT 58.734 39.130 0.00 0.00 39.43 2.57
4138 4255 3.484557 GGTGTACCGCATTTTGATACACG 60.485 47.826 6.72 0.00 44.21 4.49
4139 4256 3.368539 GTGTACCGCATTTTGATACACGA 59.631 43.478 0.00 0.00 37.11 4.35
4141 4258 2.695359 ACCGCATTTTGATACACGAGT 58.305 42.857 0.00 0.00 0.00 4.18
4143 4260 3.615496 ACCGCATTTTGATACACGAGTAC 59.385 43.478 0.00 0.00 31.96 2.73
4243 4363 3.890756 ACATTTCATGAGTGCACCTTTCA 59.109 39.130 14.63 11.65 0.00 2.69
4266 4386 1.067706 TCGAATGTTGCAATTGCCTGG 60.068 47.619 26.94 9.66 41.18 4.45
4267 4387 1.729284 GAATGTTGCAATTGCCTGGG 58.271 50.000 26.94 0.00 41.18 4.45
4279 4399 2.905415 TGCCTGGGATTTCATGAGTT 57.095 45.000 0.00 0.00 0.00 3.01
4307 4433 5.591472 TGCTCATCTGCTATGTATTTTGCTT 59.409 36.000 0.50 0.00 0.00 3.91
4332 4610 5.829924 CCCAGCACTAATTTATCTTCCACAT 59.170 40.000 0.00 0.00 0.00 3.21
4339 4617 8.288208 CACTAATTTATCTTCCACATCATGCTC 58.712 37.037 0.00 0.00 0.00 4.26
4346 4624 1.434622 CCACATCATGCTCGCTGGAC 61.435 60.000 0.00 0.00 0.00 4.02
4368 4646 8.206867 TGGACTCTAACAAAGATATGAGAATGG 58.793 37.037 0.00 0.00 32.41 3.16
4379 4657 7.180322 AGATATGAGAATGGTAGCTGGTATG 57.820 40.000 0.00 0.00 0.00 2.39
4382 4660 4.552674 TGAGAATGGTAGCTGGTATGGTA 58.447 43.478 0.00 0.00 0.00 3.25
4383 4661 4.588951 TGAGAATGGTAGCTGGTATGGTAG 59.411 45.833 0.00 0.00 0.00 3.18
4384 4662 4.557705 AGAATGGTAGCTGGTATGGTAGT 58.442 43.478 0.00 0.00 0.00 2.73
4385 4663 4.345257 AGAATGGTAGCTGGTATGGTAGTG 59.655 45.833 0.00 0.00 0.00 2.74
4386 4664 3.110293 TGGTAGCTGGTATGGTAGTGT 57.890 47.619 0.00 0.00 0.00 3.55
4388 4666 3.449737 TGGTAGCTGGTATGGTAGTGTTC 59.550 47.826 0.00 0.00 0.00 3.18
4389 4667 2.961526 AGCTGGTATGGTAGTGTTCG 57.038 50.000 0.00 0.00 0.00 3.95
4419 4709 3.026630 ACTCGTCACACCAATGTAGTG 57.973 47.619 0.00 0.00 36.72 2.74
4434 4724 2.206750 GTAGTGGAAAACGCTGTCACA 58.793 47.619 0.00 0.00 40.86 3.58
4439 4729 3.496884 GTGGAAAACGCTGTCACAGATTA 59.503 43.478 9.70 0.00 32.44 1.75
4440 4730 4.154195 GTGGAAAACGCTGTCACAGATTAT 59.846 41.667 9.70 0.00 32.44 1.28
4445 4735 6.648725 AAACGCTGTCACAGATTATTACTC 57.351 37.500 9.70 0.00 32.44 2.59
4446 4736 4.683832 ACGCTGTCACAGATTATTACTCC 58.316 43.478 9.70 0.00 32.44 3.85
4448 4738 4.202161 CGCTGTCACAGATTATTACTCCCT 60.202 45.833 9.70 0.00 32.44 4.20
4449 4739 5.293560 GCTGTCACAGATTATTACTCCCTC 58.706 45.833 9.70 0.00 32.44 4.30
4450 4740 5.740513 GCTGTCACAGATTATTACTCCCTCC 60.741 48.000 9.70 0.00 32.44 4.30
4451 4741 4.341235 TGTCACAGATTATTACTCCCTCCG 59.659 45.833 0.00 0.00 0.00 4.63
4453 4743 4.960469 TCACAGATTATTACTCCCTCCGTT 59.040 41.667 0.00 0.00 0.00 4.44
4458 4748 6.267014 CAGATTATTACTCCCTCCGTTCCTAA 59.733 42.308 0.00 0.00 0.00 2.69
4459 4749 6.842807 AGATTATTACTCCCTCCGTTCCTAAA 59.157 38.462 0.00 0.00 0.00 1.85
4460 4750 7.513091 AGATTATTACTCCCTCCGTTCCTAAAT 59.487 37.037 0.00 0.00 0.00 1.40
4461 4751 8.731591 ATTATTACTCCCTCCGTTCCTAAATA 57.268 34.615 0.00 0.00 0.00 1.40
4462 4752 5.859205 TTACTCCCTCCGTTCCTAAATAC 57.141 43.478 0.00 0.00 0.00 1.89
4463 4753 3.716431 ACTCCCTCCGTTCCTAAATACA 58.284 45.455 0.00 0.00 0.00 2.29
4464 4754 3.450096 ACTCCCTCCGTTCCTAAATACAC 59.550 47.826 0.00 0.00 0.00 2.90
4465 4755 3.705072 CTCCCTCCGTTCCTAAATACACT 59.295 47.826 0.00 0.00 0.00 3.55
4467 4757 4.891756 TCCCTCCGTTCCTAAATACACTAG 59.108 45.833 0.00 0.00 0.00 2.57
4469 4759 5.009811 CCCTCCGTTCCTAAATACACTAGAG 59.990 48.000 0.00 0.00 0.00 2.43
4470 4760 5.826737 CCTCCGTTCCTAAATACACTAGAGA 59.173 44.000 0.00 0.00 0.00 3.10
4471 4761 6.490721 CCTCCGTTCCTAAATACACTAGAGAT 59.509 42.308 0.00 0.00 0.00 2.75
4472 4762 7.014422 CCTCCGTTCCTAAATACACTAGAGATT 59.986 40.741 0.00 0.00 0.00 2.40
4473 4763 8.302515 TCCGTTCCTAAATACACTAGAGATTT 57.697 34.615 0.00 1.89 0.00 2.17
4487 4777 9.201989 ACACTAGAGATTTTACTATGGATCACA 57.798 33.333 0.00 0.00 0.00 3.58
4500 4790 8.441311 ACTATGGATCACATAAGGATGTATGT 57.559 34.615 0.00 0.00 44.82 2.29
4501 4791 9.547279 ACTATGGATCACATAAGGATGTATGTA 57.453 33.333 0.00 0.00 44.82 2.29
4503 4793 8.670521 ATGGATCACATAAGGATGTATGTAGA 57.329 34.615 0.00 0.53 44.82 2.59
4504 4794 8.670521 TGGATCACATAAGGATGTATGTAGAT 57.329 34.615 0.00 4.51 44.82 1.98
4505 4795 8.534496 TGGATCACATAAGGATGTATGTAGATG 58.466 37.037 0.00 0.00 44.82 2.90
4506 4796 7.493971 GGATCACATAAGGATGTATGTAGATGC 59.506 40.741 0.00 10.92 44.82 3.91
4507 4797 7.301868 TCACATAAGGATGTATGTAGATGCA 57.698 36.000 0.00 0.00 44.82 3.96
4508 4798 7.910584 TCACATAAGGATGTATGTAGATGCAT 58.089 34.615 0.00 0.00 44.82 3.96
4509 4799 8.377799 TCACATAAGGATGTATGTAGATGCATT 58.622 33.333 0.00 0.00 44.82 3.56
4510 4800 9.006839 CACATAAGGATGTATGTAGATGCATTT 57.993 33.333 0.00 0.00 44.82 2.32
4511 4801 9.224267 ACATAAGGATGTATGTAGATGCATTTC 57.776 33.333 0.00 2.01 44.77 2.17
4512 4802 9.223099 CATAAGGATGTATGTAGATGCATTTCA 57.777 33.333 0.00 1.08 35.26 2.69
4513 4803 7.741027 AAGGATGTATGTAGATGCATTTCAG 57.259 36.000 0.00 0.00 35.26 3.02
4514 4804 7.071069 AGGATGTATGTAGATGCATTTCAGA 57.929 36.000 0.00 0.00 35.26 3.27
4515 4805 7.160049 AGGATGTATGTAGATGCATTTCAGAG 58.840 38.462 0.00 0.00 35.26 3.35
4516 4806 6.933521 GGATGTATGTAGATGCATTTCAGAGT 59.066 38.462 0.00 0.00 35.26 3.24
4517 4807 7.095313 GGATGTATGTAGATGCATTTCAGAGTG 60.095 40.741 0.00 0.00 35.26 3.51
4518 4808 6.643388 TGTATGTAGATGCATTTCAGAGTGT 58.357 36.000 0.00 0.00 0.00 3.55
4519 4809 7.781056 TGTATGTAGATGCATTTCAGAGTGTA 58.219 34.615 0.00 0.00 0.00 2.90
4520 4810 7.922811 TGTATGTAGATGCATTTCAGAGTGTAG 59.077 37.037 0.00 0.00 0.00 2.74
4521 4811 6.530019 TGTAGATGCATTTCAGAGTGTAGA 57.470 37.500 0.00 0.00 0.00 2.59
4522 4812 7.117285 TGTAGATGCATTTCAGAGTGTAGAT 57.883 36.000 0.00 0.00 0.00 1.98
4523 4813 7.559486 TGTAGATGCATTTCAGAGTGTAGATT 58.441 34.615 0.00 0.00 0.00 2.40
4524 4814 7.708322 TGTAGATGCATTTCAGAGTGTAGATTC 59.292 37.037 0.00 0.00 0.00 2.52
4525 4815 6.647229 AGATGCATTTCAGAGTGTAGATTCA 58.353 36.000 0.00 0.00 0.00 2.57
4526 4816 6.538021 AGATGCATTTCAGAGTGTAGATTCAC 59.462 38.462 0.00 0.00 38.46 3.18
4536 4826 5.674052 AGTGTAGATTCACTCATCTTGCT 57.326 39.130 0.00 0.00 44.07 3.91
4537 4827 5.659463 AGTGTAGATTCACTCATCTTGCTC 58.341 41.667 0.00 0.00 44.07 4.26
4538 4828 4.808364 GTGTAGATTCACTCATCTTGCTCC 59.192 45.833 0.00 0.00 35.08 4.70
4539 4829 3.176552 AGATTCACTCATCTTGCTCCG 57.823 47.619 0.00 0.00 28.19 4.63
4540 4830 2.499289 AGATTCACTCATCTTGCTCCGT 59.501 45.455 0.00 0.00 28.19 4.69
4541 4831 3.701542 AGATTCACTCATCTTGCTCCGTA 59.298 43.478 0.00 0.00 28.19 4.02
4542 4832 4.343526 AGATTCACTCATCTTGCTCCGTAT 59.656 41.667 0.00 0.00 28.19 3.06
4543 4833 3.443099 TCACTCATCTTGCTCCGTATG 57.557 47.619 0.00 0.00 0.00 2.39
4544 4834 2.760650 TCACTCATCTTGCTCCGTATGT 59.239 45.455 0.00 0.00 0.00 2.29
4545 4835 3.951680 TCACTCATCTTGCTCCGTATGTA 59.048 43.478 0.00 0.00 0.00 2.29
4546 4836 4.036852 TCACTCATCTTGCTCCGTATGTAG 59.963 45.833 0.00 0.00 0.00 2.74
4547 4837 3.954904 ACTCATCTTGCTCCGTATGTAGT 59.045 43.478 0.00 0.00 0.00 2.73
4548 4838 4.402793 ACTCATCTTGCTCCGTATGTAGTT 59.597 41.667 0.00 0.00 0.00 2.24
4549 4839 4.933330 TCATCTTGCTCCGTATGTAGTTC 58.067 43.478 0.00 0.00 0.00 3.01
4550 4840 4.401202 TCATCTTGCTCCGTATGTAGTTCA 59.599 41.667 0.00 0.00 0.00 3.18
4551 4841 5.069119 TCATCTTGCTCCGTATGTAGTTCAT 59.931 40.000 0.00 0.00 40.25 2.57
4552 4842 6.264518 TCATCTTGCTCCGTATGTAGTTCATA 59.735 38.462 0.00 0.00 37.91 2.15
4553 4843 6.073327 TCTTGCTCCGTATGTAGTTCATAG 57.927 41.667 0.00 0.00 39.36 2.23
4554 4844 5.593095 TCTTGCTCCGTATGTAGTTCATAGT 59.407 40.000 0.00 0.00 39.36 2.12
4555 4845 5.183014 TGCTCCGTATGTAGTTCATAGTG 57.817 43.478 0.00 0.00 39.36 2.74
4556 4846 4.885325 TGCTCCGTATGTAGTTCATAGTGA 59.115 41.667 0.00 0.00 39.36 3.41
4557 4847 5.358725 TGCTCCGTATGTAGTTCATAGTGAA 59.641 40.000 0.00 0.00 39.36 3.18
4558 4848 6.127563 TGCTCCGTATGTAGTTCATAGTGAAA 60.128 38.462 0.00 0.00 38.22 2.69
4559 4849 6.924060 GCTCCGTATGTAGTTCATAGTGAAAT 59.076 38.462 0.00 0.00 38.22 2.17
4560 4850 7.115095 GCTCCGTATGTAGTTCATAGTGAAATC 59.885 40.741 0.00 0.00 38.22 2.17
4561 4851 8.234136 TCCGTATGTAGTTCATAGTGAAATCT 57.766 34.615 0.00 0.00 38.22 2.40
4562 4852 8.350722 TCCGTATGTAGTTCATAGTGAAATCTC 58.649 37.037 0.00 0.00 38.22 2.75
4563 4853 8.353684 CCGTATGTAGTTCATAGTGAAATCTCT 58.646 37.037 0.00 0.00 38.22 3.10
4571 4861 7.550906 AGTTCATAGTGAAATCTCTACAAAGGC 59.449 37.037 0.00 0.00 38.22 4.35
4572 4862 7.187824 TCATAGTGAAATCTCTACAAAGGCT 57.812 36.000 0.00 0.00 0.00 4.58
4573 4863 7.624549 TCATAGTGAAATCTCTACAAAGGCTT 58.375 34.615 0.00 0.00 0.00 4.35
4574 4864 7.550551 TCATAGTGAAATCTCTACAAAGGCTTG 59.449 37.037 0.00 0.00 38.61 4.01
4576 4866 6.769512 AGTGAAATCTCTACAAAGGCTTGTA 58.230 36.000 0.00 5.03 44.14 2.41
4577 4867 6.651225 AGTGAAATCTCTACAAAGGCTTGTAC 59.349 38.462 0.00 0.00 44.14 2.90
4578 4868 6.651225 GTGAAATCTCTACAAAGGCTTGTACT 59.349 38.462 0.00 0.00 44.14 2.73
4579 4869 6.874134 TGAAATCTCTACAAAGGCTTGTACTC 59.126 38.462 0.00 0.00 44.14 2.59
4580 4870 4.803098 TCTCTACAAAGGCTTGTACTCC 57.197 45.455 0.00 0.00 44.14 3.85
4581 4871 3.514309 TCTCTACAAAGGCTTGTACTCCC 59.486 47.826 0.00 0.00 44.14 4.30
4582 4872 3.515901 CTCTACAAAGGCTTGTACTCCCT 59.484 47.826 0.00 0.00 44.14 4.20
4583 4873 3.908103 TCTACAAAGGCTTGTACTCCCTT 59.092 43.478 0.00 6.49 44.14 3.95
4584 4874 3.141767 ACAAAGGCTTGTACTCCCTTC 57.858 47.619 0.00 0.00 44.14 3.46
4585 4875 2.076863 CAAAGGCTTGTACTCCCTTCG 58.923 52.381 0.00 0.00 37.97 3.79
4586 4876 1.349067 AAGGCTTGTACTCCCTTCGT 58.651 50.000 0.00 0.00 33.88 3.85
4587 4877 1.349067 AGGCTTGTACTCCCTTCGTT 58.651 50.000 0.00 0.00 0.00 3.85
4588 4878 1.275573 AGGCTTGTACTCCCTTCGTTC 59.724 52.381 0.00 0.00 0.00 3.95
4589 4879 1.001633 GGCTTGTACTCCCTTCGTTCA 59.998 52.381 0.00 0.00 0.00 3.18
4590 4880 2.338500 GCTTGTACTCCCTTCGTTCAG 58.662 52.381 0.00 0.00 0.00 3.02
4591 4881 2.029290 GCTTGTACTCCCTTCGTTCAGA 60.029 50.000 0.00 0.00 0.00 3.27
4592 4882 3.554337 GCTTGTACTCCCTTCGTTCAGAA 60.554 47.826 0.00 0.00 37.31 3.02
4593 4883 4.822026 CTTGTACTCCCTTCGTTCAGAAT 58.178 43.478 0.00 0.00 38.34 2.40
4594 4884 4.884668 TGTACTCCCTTCGTTCAGAATT 57.115 40.909 0.00 0.00 38.34 2.17
4595 4885 5.988310 TGTACTCCCTTCGTTCAGAATTA 57.012 39.130 0.00 0.00 38.34 1.40
4596 4886 5.717119 TGTACTCCCTTCGTTCAGAATTAC 58.283 41.667 0.00 0.00 38.34 1.89
4597 4887 5.479375 TGTACTCCCTTCGTTCAGAATTACT 59.521 40.000 0.00 0.00 38.34 2.24
4598 4888 5.485209 ACTCCCTTCGTTCAGAATTACTT 57.515 39.130 0.00 0.00 38.34 2.24
4599 4889 5.238583 ACTCCCTTCGTTCAGAATTACTTG 58.761 41.667 0.00 0.00 38.34 3.16
4600 4890 5.221661 ACTCCCTTCGTTCAGAATTACTTGT 60.222 40.000 0.00 0.00 38.34 3.16
4601 4891 5.235516 TCCCTTCGTTCAGAATTACTTGTC 58.764 41.667 0.00 0.00 38.34 3.18
4602 4892 4.392138 CCCTTCGTTCAGAATTACTTGTCC 59.608 45.833 0.00 0.00 38.34 4.02
4603 4893 4.994852 CCTTCGTTCAGAATTACTTGTCCA 59.005 41.667 0.00 0.00 38.34 4.02
4604 4894 5.468746 CCTTCGTTCAGAATTACTTGTCCAA 59.531 40.000 0.00 0.00 38.34 3.53
4605 4895 6.347725 CCTTCGTTCAGAATTACTTGTCCAAG 60.348 42.308 5.51 5.51 40.05 3.61
4606 4896 5.849510 TCGTTCAGAATTACTTGTCCAAGA 58.150 37.500 13.69 0.00 40.79 3.02
4607 4897 6.285224 TCGTTCAGAATTACTTGTCCAAGAA 58.715 36.000 13.69 4.62 40.79 2.52
4608 4898 6.934645 TCGTTCAGAATTACTTGTCCAAGAAT 59.065 34.615 13.69 6.49 40.79 2.40
4609 4899 7.444183 TCGTTCAGAATTACTTGTCCAAGAATT 59.556 33.333 13.69 13.16 40.79 2.17
4656 4946 8.862325 AGTTGTAGATACATCCATTTTTGTGA 57.138 30.769 0.00 0.00 35.89 3.58
4657 4947 8.730680 AGTTGTAGATACATCCATTTTTGTGAC 58.269 33.333 0.00 0.00 35.89 3.67
4658 4948 8.511321 GTTGTAGATACATCCATTTTTGTGACA 58.489 33.333 0.00 0.00 35.89 3.58
4659 4949 8.628630 TGTAGATACATCCATTTTTGTGACAA 57.371 30.769 0.00 0.00 0.00 3.18
4660 4950 8.729756 TGTAGATACATCCATTTTTGTGACAAG 58.270 33.333 0.00 0.00 0.00 3.16
4661 4951 7.765695 AGATACATCCATTTTTGTGACAAGT 57.234 32.000 0.00 0.00 0.00 3.16
4662 4952 8.862325 AGATACATCCATTTTTGTGACAAGTA 57.138 30.769 0.00 0.00 0.00 2.24
4663 4953 9.295825 AGATACATCCATTTTTGTGACAAGTAA 57.704 29.630 0.00 0.00 0.00 2.24
4666 4956 8.816640 ACATCCATTTTTGTGACAAGTAATTC 57.183 30.769 0.00 0.00 0.00 2.17
4667 4957 7.872483 ACATCCATTTTTGTGACAAGTAATTCC 59.128 33.333 0.00 0.00 0.00 3.01
4668 4958 6.442952 TCCATTTTTGTGACAAGTAATTCCG 58.557 36.000 0.00 0.00 0.00 4.30
4669 4959 6.263392 TCCATTTTTGTGACAAGTAATTCCGA 59.737 34.615 0.00 0.00 0.00 4.55
4670 4960 6.362283 CCATTTTTGTGACAAGTAATTCCGAC 59.638 38.462 0.00 0.00 0.00 4.79
4671 4961 5.427036 TTTTGTGACAAGTAATTCCGACC 57.573 39.130 0.00 0.00 0.00 4.79
4672 4962 2.679450 TGTGACAAGTAATTCCGACCG 58.321 47.619 0.00 0.00 0.00 4.79
4673 4963 1.997606 GTGACAAGTAATTCCGACCGG 59.002 52.381 0.00 0.00 0.00 5.28
4674 4964 1.894466 TGACAAGTAATTCCGACCGGA 59.106 47.619 9.46 7.11 43.52 5.14
4675 4965 2.094390 TGACAAGTAATTCCGACCGGAG 60.094 50.000 9.46 0.51 46.06 4.63
4693 4983 5.546621 CGGAGGGAGTATTTAGAAATGGA 57.453 43.478 0.00 0.00 0.00 3.41
4694 4984 5.542779 CGGAGGGAGTATTTAGAAATGGAG 58.457 45.833 0.00 0.00 0.00 3.86
4695 4985 5.511545 CGGAGGGAGTATTTAGAAATGGAGG 60.512 48.000 0.00 0.00 0.00 4.30
4696 4986 5.221945 GGAGGGAGTATTTAGAAATGGAGGG 60.222 48.000 0.00 0.00 0.00 4.30
4697 4987 5.548573 AGGGAGTATTTAGAAATGGAGGGA 58.451 41.667 0.00 0.00 0.00 4.20
4698 4988 5.608860 AGGGAGTATTTAGAAATGGAGGGAG 59.391 44.000 0.00 0.00 0.00 4.30
4699 4989 5.369993 GGGAGTATTTAGAAATGGAGGGAGT 59.630 44.000 0.00 0.00 0.00 3.85
4700 4990 6.557633 GGGAGTATTTAGAAATGGAGGGAGTA 59.442 42.308 0.00 0.00 0.00 2.59
4701 4991 7.256368 GGGAGTATTTAGAAATGGAGGGAGTAG 60.256 44.444 0.00 0.00 0.00 2.57
4702 4992 7.509659 GGAGTATTTAGAAATGGAGGGAGTAGA 59.490 40.741 0.00 0.00 0.00 2.59
4703 4993 8.855804 AGTATTTAGAAATGGAGGGAGTAGAA 57.144 34.615 0.00 0.00 0.00 2.10
4704 4994 9.280456 AGTATTTAGAAATGGAGGGAGTAGAAA 57.720 33.333 0.00 0.00 0.00 2.52
4705 4995 9.549078 GTATTTAGAAATGGAGGGAGTAGAAAG 57.451 37.037 0.00 0.00 0.00 2.62
4751 5041 8.913487 TCTATGAGATATGCATGTTTTCACAT 57.087 30.769 10.16 12.55 45.18 3.21
4753 5043 6.381481 TGAGATATGCATGTTTTCACATCC 57.619 37.500 10.16 0.00 42.14 3.51
4777 5102 3.816523 GTCACCTACAAAAATTGACCCGA 59.183 43.478 0.00 0.00 32.12 5.14
4815 5140 5.399301 ACAAAAAGACTGCGAAAATTCATCG 59.601 36.000 8.74 8.74 42.99 3.84
4878 5208 7.646446 AAAAAGCAAGTTCGTTTTTGTTAGT 57.354 28.000 4.38 0.00 33.26 2.24
4880 5210 5.305139 AGCAAGTTCGTTTTTGTTAGTGT 57.695 34.783 0.00 0.00 0.00 3.55
4881 5211 5.705902 AGCAAGTTCGTTTTTGTTAGTGTT 58.294 33.333 0.00 0.00 0.00 3.32
4882 5212 6.844254 AGCAAGTTCGTTTTTGTTAGTGTTA 58.156 32.000 0.00 0.00 0.00 2.41
4883 5213 6.964934 AGCAAGTTCGTTTTTGTTAGTGTTAG 59.035 34.615 0.00 0.00 0.00 2.34
4884 5214 6.195798 GCAAGTTCGTTTTTGTTAGTGTTAGG 59.804 38.462 0.00 0.00 0.00 2.69
4885 5215 7.465989 CAAGTTCGTTTTTGTTAGTGTTAGGA 58.534 34.615 0.00 0.00 0.00 2.94
4933 5264 4.019321 GGGAGAAAGCAGGCCATATGTATA 60.019 45.833 5.01 0.00 0.00 1.47
4934 5265 5.339530 GGGAGAAAGCAGGCCATATGTATAT 60.340 44.000 5.01 0.00 0.00 0.86
4941 5272 5.721480 AGCAGGCCATATGTATATAGTCACA 59.279 40.000 5.01 0.00 0.00 3.58
5059 5390 3.711782 CCCCCTCCCCTTCTCCCT 61.712 72.222 0.00 0.00 0.00 4.20
5060 5391 2.341677 CCCCCTCCCCTTCTCCCTA 61.342 68.421 0.00 0.00 0.00 3.53
5061 5392 1.690148 CCCCCTCCCCTTCTCCCTAT 61.690 65.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.296713 CGGGGTAGAATTATATCAAACAAATGG 58.703 37.037 0.00 0.00 0.00 3.16
74 75 4.082026 GCTGCTCACATAAAATGTCCCTTT 60.082 41.667 0.00 0.00 42.70 3.11
120 121 5.179368 GGACCACATAACCGTGATGATTATG 59.821 44.000 2.58 0.00 39.60 1.90
203 204 0.803117 CTCTCGAGTGCGTCTTACCA 59.197 55.000 13.13 0.00 38.98 3.25
231 232 0.615850 GCCTAGGAAGTTCCAGCAGT 59.384 55.000 23.87 5.27 39.61 4.40
237 238 0.905357 TCTGCTGCCTAGGAAGTTCC 59.095 55.000 18.72 14.54 36.58 3.62
286 287 3.753815 TCATGTTGTTTGCATCTGGAGA 58.246 40.909 0.00 0.00 0.00 3.71
306 307 6.535150 TGATCGAGGTATCTGTGTTGATTTTC 59.465 38.462 0.00 0.00 0.00 2.29
322 323 1.473278 GTCTCCGAAGTTGATCGAGGT 59.527 52.381 0.00 0.00 45.48 3.85
351 352 3.640407 GCCACTCCTCCTGCACCA 61.640 66.667 0.00 0.00 0.00 4.17
382 383 0.111253 CACCAAGCTCCCAAGAAGGT 59.889 55.000 0.00 0.00 34.66 3.50
577 621 7.463544 TGTCGCTCTTATTACATGTTGAATTG 58.536 34.615 2.30 0.00 0.00 2.32
600 644 0.108585 AGATGTGCAGGACCGTTTGT 59.891 50.000 0.00 0.00 0.00 2.83
654 698 3.028130 GGGTAGTCTCAAGCTAGCTCTT 58.972 50.000 19.65 0.00 37.19 2.85
661 705 3.476485 AGTTAGGGGTAGTCTCAAGCT 57.524 47.619 0.00 0.00 0.00 3.74
665 709 5.006896 TCAGAAAGTTAGGGGTAGTCTCA 57.993 43.478 0.00 0.00 0.00 3.27
679 723 5.006386 CCAAAAGGCTACTGATCAGAAAGT 58.994 41.667 29.27 10.11 0.00 2.66
683 727 2.573462 AGCCAAAAGGCTACTGATCAGA 59.427 45.455 29.27 11.66 44.06 3.27
755 799 9.476202 CCCTTTGTTTTATACTCCTTCTTTTTG 57.524 33.333 0.00 0.00 0.00 2.44
756 800 9.429109 TCCCTTTGTTTTATACTCCTTCTTTTT 57.571 29.630 0.00 0.00 0.00 1.94
757 801 9.078990 CTCCCTTTGTTTTATACTCCTTCTTTT 57.921 33.333 0.00 0.00 0.00 2.27
758 802 8.225416 ACTCCCTTTGTTTTATACTCCTTCTTT 58.775 33.333 0.00 0.00 0.00 2.52
759 803 7.756614 ACTCCCTTTGTTTTATACTCCTTCTT 58.243 34.615 0.00 0.00 0.00 2.52
760 804 7.331089 ACTCCCTTTGTTTTATACTCCTTCT 57.669 36.000 0.00 0.00 0.00 2.85
761 805 9.682465 AATACTCCCTTTGTTTTATACTCCTTC 57.318 33.333 0.00 0.00 0.00 3.46
790 834 9.010029 GTACTCCATTGTCCATCTTAAGAAAAA 57.990 33.333 9.71 0.00 0.00 1.94
791 835 8.160765 TGTACTCCATTGTCCATCTTAAGAAAA 58.839 33.333 9.71 0.36 0.00 2.29
792 836 7.685481 TGTACTCCATTGTCCATCTTAAGAAA 58.315 34.615 9.71 0.00 0.00 2.52
793 837 7.252612 TGTACTCCATTGTCCATCTTAAGAA 57.747 36.000 9.71 0.00 0.00 2.52
794 838 6.867519 TGTACTCCATTGTCCATCTTAAGA 57.132 37.500 7.82 7.82 0.00 2.10
795 839 8.400947 CAAATGTACTCCATTGTCCATCTTAAG 58.599 37.037 0.00 0.00 43.04 1.85
796 840 7.888021 ACAAATGTACTCCATTGTCCATCTTAA 59.112 33.333 0.00 0.00 43.04 1.85
797 841 7.402054 ACAAATGTACTCCATTGTCCATCTTA 58.598 34.615 0.00 0.00 43.04 2.10
798 842 6.248433 ACAAATGTACTCCATTGTCCATCTT 58.752 36.000 0.00 0.00 43.04 2.40
799 843 5.819991 ACAAATGTACTCCATTGTCCATCT 58.180 37.500 0.00 0.00 43.04 2.90
800 844 6.324819 CAACAAATGTACTCCATTGTCCATC 58.675 40.000 0.00 0.00 43.04 3.51
801 845 5.185635 CCAACAAATGTACTCCATTGTCCAT 59.814 40.000 0.00 0.00 43.04 3.41
802 846 4.522405 CCAACAAATGTACTCCATTGTCCA 59.478 41.667 0.00 0.00 43.04 4.02
803 847 4.618227 GCCAACAAATGTACTCCATTGTCC 60.618 45.833 0.00 0.00 43.04 4.02
804 848 4.022416 TGCCAACAAATGTACTCCATTGTC 60.022 41.667 0.00 0.00 43.04 3.18
805 849 3.894427 TGCCAACAAATGTACTCCATTGT 59.106 39.130 0.00 0.00 43.04 2.71
806 850 4.236935 GTGCCAACAAATGTACTCCATTG 58.763 43.478 0.00 0.00 43.04 2.82
807 851 3.057596 CGTGCCAACAAATGTACTCCATT 60.058 43.478 0.00 0.00 45.81 3.16
808 852 2.487762 CGTGCCAACAAATGTACTCCAT 59.512 45.455 0.00 0.00 34.36 3.41
809 853 1.876799 CGTGCCAACAAATGTACTCCA 59.123 47.619 0.00 0.00 0.00 3.86
810 854 1.877443 ACGTGCCAACAAATGTACTCC 59.123 47.619 0.00 0.00 0.00 3.85
811 855 3.991773 TCTACGTGCCAACAAATGTACTC 59.008 43.478 0.00 0.00 0.00 2.59
812 856 3.744426 GTCTACGTGCCAACAAATGTACT 59.256 43.478 0.00 0.00 0.00 2.73
813 857 3.422603 CGTCTACGTGCCAACAAATGTAC 60.423 47.826 0.00 0.00 34.11 2.90
814 858 2.732500 CGTCTACGTGCCAACAAATGTA 59.267 45.455 0.00 0.00 34.11 2.29
815 859 1.529438 CGTCTACGTGCCAACAAATGT 59.471 47.619 0.00 0.00 34.11 2.71
816 860 1.724654 GCGTCTACGTGCCAACAAATG 60.725 52.381 0.00 0.00 42.22 2.32
817 861 0.515564 GCGTCTACGTGCCAACAAAT 59.484 50.000 0.00 0.00 42.22 2.32
818 862 1.823260 CGCGTCTACGTGCCAACAAA 61.823 55.000 0.00 0.00 43.06 2.83
819 863 2.304401 CGCGTCTACGTGCCAACAA 61.304 57.895 0.00 0.00 43.06 2.83
820 864 2.731721 CGCGTCTACGTGCCAACA 60.732 61.111 0.00 0.00 43.06 3.33
828 872 1.132199 CTTGCACCTACGCGTCTACG 61.132 60.000 18.63 4.41 43.27 3.51
829 873 0.169672 TCTTGCACCTACGCGTCTAC 59.830 55.000 18.63 2.45 33.35 2.59
830 874 0.169672 GTCTTGCACCTACGCGTCTA 59.830 55.000 18.63 0.00 33.35 2.59
831 875 1.080705 GTCTTGCACCTACGCGTCT 60.081 57.895 18.63 0.00 33.35 4.18
832 876 0.666577 AAGTCTTGCACCTACGCGTC 60.667 55.000 18.63 0.07 33.35 5.19
833 877 0.249741 AAAGTCTTGCACCTACGCGT 60.250 50.000 19.17 19.17 33.35 6.01
834 878 0.438830 GAAAGTCTTGCACCTACGCG 59.561 55.000 3.53 3.53 33.35 6.01
835 879 0.438830 CGAAAGTCTTGCACCTACGC 59.561 55.000 0.00 0.00 0.00 4.42
836 880 1.068474 CCGAAAGTCTTGCACCTACG 58.932 55.000 0.00 0.00 0.00 3.51
837 881 1.439679 CCCGAAAGTCTTGCACCTAC 58.560 55.000 0.00 0.00 0.00 3.18
838 882 0.323629 CCCCGAAAGTCTTGCACCTA 59.676 55.000 0.00 0.00 0.00 3.08
839 883 1.073199 CCCCGAAAGTCTTGCACCT 59.927 57.895 0.00 0.00 0.00 4.00
840 884 0.536460 TTCCCCGAAAGTCTTGCACC 60.536 55.000 0.00 0.00 0.00 5.01
841 885 1.314730 TTTCCCCGAAAGTCTTGCAC 58.685 50.000 0.00 0.00 0.00 4.57
842 886 2.286365 ATTTCCCCGAAAGTCTTGCA 57.714 45.000 0.00 0.00 34.92 4.08
843 887 3.078837 TGTATTTCCCCGAAAGTCTTGC 58.921 45.455 0.00 0.00 34.92 4.01
844 888 4.760204 ACTTGTATTTCCCCGAAAGTCTTG 59.240 41.667 0.00 0.00 34.92 3.02
845 889 4.760204 CACTTGTATTTCCCCGAAAGTCTT 59.240 41.667 0.00 0.00 34.92 3.01
846 890 4.041198 TCACTTGTATTTCCCCGAAAGTCT 59.959 41.667 0.00 0.00 34.92 3.24
847 891 4.320870 TCACTTGTATTTCCCCGAAAGTC 58.679 43.478 0.00 0.00 34.92 3.01
853 897 5.914033 TCTCTATTCACTTGTATTTCCCCG 58.086 41.667 0.00 0.00 0.00 5.73
855 899 6.768381 CCCTTCTCTATTCACTTGTATTTCCC 59.232 42.308 0.00 0.00 0.00 3.97
873 917 7.615403 TCTGATATTGTACATATGCCCTTCTC 58.385 38.462 1.58 0.00 0.00 2.87
874 918 7.559335 TCTGATATTGTACATATGCCCTTCT 57.441 36.000 1.58 0.00 0.00 2.85
877 921 6.273260 AGGTTCTGATATTGTACATATGCCCT 59.727 38.462 1.58 0.00 0.00 5.19
889 933 6.313905 GGTGTACTCACAAGGTTCTGATATTG 59.686 42.308 0.00 0.00 45.45 1.90
961 1006 0.589223 GGGTTCGCGTGAATTTGTCA 59.411 50.000 15.45 0.00 36.29 3.58
991 1036 3.412624 GAGGGGAGGTGATGGCTGC 62.413 68.421 0.00 0.00 0.00 5.25
1002 1047 2.684499 GCAAAGGGGAGGAGGGGAG 61.684 68.421 0.00 0.00 0.00 4.30
1017 1065 3.825160 AAGAGAAGTGGCGGCGCAA 62.825 57.895 34.36 22.17 0.00 4.85
1046 1094 2.524394 TAGCTGGATCGAGGGGGC 60.524 66.667 6.88 0.00 0.00 5.80
1047 1095 2.578714 GCTAGCTGGATCGAGGGGG 61.579 68.421 7.70 0.00 0.00 5.40
1049 1097 2.647875 CGCTAGCTGGATCGAGGG 59.352 66.667 13.93 0.00 0.00 4.30
1050 1098 1.739338 AACCGCTAGCTGGATCGAGG 61.739 60.000 25.67 14.27 0.00 4.63
1054 1102 0.318762 CCCTAACCGCTAGCTGGATC 59.681 60.000 25.67 0.00 0.00 3.36
1055 1103 0.398664 ACCCTAACCGCTAGCTGGAT 60.399 55.000 25.67 18.67 0.00 3.41
1056 1104 0.616679 AACCCTAACCGCTAGCTGGA 60.617 55.000 25.67 7.53 0.00 3.86
1057 1105 0.179081 GAACCCTAACCGCTAGCTGG 60.179 60.000 19.72 19.72 0.00 4.85
1058 1106 0.179081 GGAACCCTAACCGCTAGCTG 60.179 60.000 13.93 9.13 0.00 4.24
1059 1107 2.209475 GGAACCCTAACCGCTAGCT 58.791 57.895 13.93 0.00 0.00 3.32
1060 1108 4.850822 GGAACCCTAACCGCTAGC 57.149 61.111 4.06 4.06 0.00 3.42
1079 1138 3.810896 GCCATGGTCGCCGGTTTC 61.811 66.667 14.67 0.00 0.00 2.78
1222 1281 1.993370 CCTTTCGCGAGTGAGGTAAAG 59.007 52.381 20.65 14.08 32.33 1.85
1229 1288 1.080501 CTGAGCCTTTCGCGAGTGA 60.081 57.895 9.59 0.00 44.76 3.41
1307 1398 1.281566 CCAACCAATTTCGCAACCGC 61.282 55.000 0.00 0.00 0.00 5.68
1320 1411 1.617947 GCCAACCAACCAACCAACCA 61.618 55.000 0.00 0.00 0.00 3.67
1353 1444 0.322816 GCTTCCATCTGACAAGGCCA 60.323 55.000 5.01 0.00 0.00 5.36
1357 1448 3.405831 TGAACTGCTTCCATCTGACAAG 58.594 45.455 0.00 0.00 0.00 3.16
1378 1469 4.347360 TCTAGCATCTGCACATTGCTAT 57.653 40.909 16.58 1.13 45.18 2.97
1427 1518 5.238650 GGCAACTTAATACGCTACAATCCAT 59.761 40.000 0.00 0.00 0.00 3.41
1438 1529 2.304751 ACTCCGGGCAACTTAATACG 57.695 50.000 0.00 0.00 0.00 3.06
1467 1558 4.475016 ACCCTCAATCCTTAATACAGCACT 59.525 41.667 0.00 0.00 0.00 4.40
1471 1562 4.137543 GCCACCCTCAATCCTTAATACAG 58.862 47.826 0.00 0.00 0.00 2.74
1473 1564 4.137543 CAGCCACCCTCAATCCTTAATAC 58.862 47.826 0.00 0.00 0.00 1.89
1511 1602 9.396022 CACACTATAACTTAATTCACCCTGATT 57.604 33.333 0.00 0.00 0.00 2.57
1536 1629 2.901839 GACCCCCAGACTACAAAGTACA 59.098 50.000 0.00 0.00 35.56 2.90
1553 1646 0.179006 GCAATCCCTCTCCATGACCC 60.179 60.000 0.00 0.00 0.00 4.46
1560 1654 1.338136 TTCCTCGGCAATCCCTCTCC 61.338 60.000 0.00 0.00 0.00 3.71
1650 1744 1.478916 GGTTGAGGCTGAGAGAGGTAC 59.521 57.143 0.00 0.00 0.00 3.34
1657 1751 1.367471 CACGTGGTTGAGGCTGAGA 59.633 57.895 7.95 0.00 0.00 3.27
1793 1890 3.375299 GGACAGCCACTGTATCAATCAAC 59.625 47.826 0.00 0.00 45.44 3.18
1810 1907 2.403252 AGATTTAACAGGCCGGACAG 57.597 50.000 11.69 2.94 0.00 3.51
1814 1911 5.644636 TGTTTTACTAGATTTAACAGGCCGG 59.355 40.000 0.00 0.00 0.00 6.13
1816 1913 6.972901 GCATGTTTTACTAGATTTAACAGGCC 59.027 38.462 19.94 0.00 45.40 5.19
1898 1995 5.443230 TGACATAACATATGGGGTGACAA 57.557 39.130 7.80 0.00 0.00 3.18
2034 2131 3.819337 AGCTAGCAATGGTTCATATGCAG 59.181 43.478 18.83 10.53 41.18 4.41
2056 2153 8.655970 GCATACATACAATCGAAGCATAATACA 58.344 33.333 0.00 0.00 0.00 2.29
2130 2228 3.052036 CAATATGCGGGCTACAATTTGC 58.948 45.455 0.00 0.00 0.00 3.68
2154 2252 6.681729 ACCATTAGTTGTTCTCTGACCTTA 57.318 37.500 0.00 0.00 0.00 2.69
2233 2331 2.346766 TGAGAGCCTGTCAGCAAAAA 57.653 45.000 0.00 0.00 34.23 1.94
2236 2334 0.035725 CCATGAGAGCCTGTCAGCAA 60.036 55.000 0.00 0.00 34.23 3.91
2238 2336 1.818785 GCCATGAGAGCCTGTCAGC 60.819 63.158 0.00 0.00 0.00 4.26
2239 2337 0.035725 TTGCCATGAGAGCCTGTCAG 60.036 55.000 0.00 0.00 0.00 3.51
2263 2364 1.984288 ATAAGCTGAAGTCGGGGGCC 61.984 60.000 0.00 0.00 0.00 5.80
2279 2380 8.402798 TGTTCAGGAATTAAGAACAAGCATAA 57.597 30.769 14.05 0.00 45.95 1.90
2318 2419 3.633986 AGAAACAAGGAAGCAGGACAAAG 59.366 43.478 0.00 0.00 0.00 2.77
2461 2565 7.433708 AACAATCATCTACGATGACAAAACA 57.566 32.000 8.56 0.00 0.00 2.83
2532 2636 6.582636 AGAAGTCCGCAAGTCATTATGATAA 58.417 36.000 0.00 0.00 0.00 1.75
2542 2646 3.299340 TCAACTAGAAGTCCGCAAGTC 57.701 47.619 0.00 0.00 0.00 3.01
2611 2715 2.563620 TGCACATTTCTTGGCATGATGT 59.436 40.909 3.72 4.08 29.90 3.06
2664 2772 8.854979 TTGTATTGTGCAATATTTAGATGTGC 57.145 30.769 7.74 0.00 35.90 4.57
2778 2887 6.677920 GCGCATAAAAGTCAACTCCACATAAT 60.678 38.462 0.30 0.00 0.00 1.28
2782 2891 2.225491 GCGCATAAAAGTCAACTCCACA 59.775 45.455 0.30 0.00 0.00 4.17
2879 2988 6.048732 TCCATAGATTACTCAGTTGTGCAA 57.951 37.500 0.00 0.00 0.00 4.08
2913 3022 8.103948 AGCAATCAATAATCAATACAGGCTAC 57.896 34.615 0.00 0.00 0.00 3.58
2934 3043 4.023726 ACCGGTTAATCAAGGTTAGCAA 57.976 40.909 0.00 0.00 32.17 3.91
2951 3060 1.553706 ACCTACCAGTCTGTAACCGG 58.446 55.000 0.00 0.00 0.00 5.28
2953 3062 2.094338 CGGAACCTACCAGTCTGTAACC 60.094 54.545 0.00 0.00 0.00 2.85
3069 3179 2.571212 CAAGTCCTACCAACAAGCACA 58.429 47.619 0.00 0.00 0.00 4.57
3104 3214 4.104776 GTGGGCATTAACATTCATTCACG 58.895 43.478 0.00 0.00 0.00 4.35
3140 3250 1.243902 ACGCGGACATGGTTCAAAAT 58.756 45.000 12.47 0.00 0.00 1.82
3157 3267 9.450807 AAGTCTGATAACAAATGAAAGAAAACG 57.549 29.630 0.00 0.00 0.00 3.60
3185 3296 4.340894 TCTGCATTTGCGTAAATCAGAC 57.659 40.909 23.45 11.31 45.83 3.51
3186 3297 5.565592 AATCTGCATTTGCGTAAATCAGA 57.434 34.783 26.38 26.38 45.83 3.27
3187 3298 6.529125 AGAAAATCTGCATTTGCGTAAATCAG 59.471 34.615 21.06 21.06 45.83 2.90
3200 3311 7.944729 ATACAGTAAACCAGAAAATCTGCAT 57.055 32.000 1.79 0.00 42.98 3.96
3228 3340 6.619660 GCTCTGCAGAAACTAAGCTTCTTTAC 60.620 42.308 18.85 0.00 30.58 2.01
3273 3385 6.688385 CCATGTAAATGCATACTGAAAACGAG 59.312 38.462 0.00 0.00 0.00 4.18
3318 3430 9.203163 ACACCTAGTCAGCTAGAAATAGTTATT 57.797 33.333 0.00 0.00 45.77 1.40
3319 3431 8.770010 ACACCTAGTCAGCTAGAAATAGTTAT 57.230 34.615 0.00 0.00 45.77 1.89
3320 3432 8.223177 GACACCTAGTCAGCTAGAAATAGTTA 57.777 38.462 0.00 0.00 45.77 2.24
3321 3433 7.102847 GACACCTAGTCAGCTAGAAATAGTT 57.897 40.000 0.00 0.00 45.77 2.24
3322 3434 6.702716 GACACCTAGTCAGCTAGAAATAGT 57.297 41.667 0.00 0.00 45.77 2.12
3594 3709 5.696270 TCATAACGAAAGCCTATACAGCATG 59.304 40.000 0.00 0.00 46.00 4.06
3724 3839 4.415881 TCCATGTATGCCGACAGTAAAT 57.584 40.909 0.00 0.00 31.51 1.40
3734 3849 4.567959 GCAAAGAAACAATCCATGTATGCC 59.432 41.667 0.00 0.00 42.99 4.40
3770 3885 5.047377 TGTTGATGGCCTGGAAAATTAAGTC 60.047 40.000 3.32 0.00 0.00 3.01
3776 3891 3.839490 TCAATGTTGATGGCCTGGAAAAT 59.161 39.130 3.32 0.00 31.01 1.82
3808 3923 7.679638 GCATGATACTCCATAAACTTGTCCAAC 60.680 40.741 0.00 0.00 0.00 3.77
3865 3980 1.003580 ACAATCAGTTGGGAGCGTGAT 59.996 47.619 0.00 0.00 39.70 3.06
3866 3981 0.396435 ACAATCAGTTGGGAGCGTGA 59.604 50.000 0.00 0.00 39.70 4.35
4019 4134 1.227409 TGCAGCCGAGACGACAAAA 60.227 52.632 0.00 0.00 0.00 2.44
4067 4184 2.645838 AGCTTCTTCACTGGCTCAAA 57.354 45.000 0.00 0.00 0.00 2.69
4133 4250 1.723273 CGCATCCGGTACTCGTGTA 59.277 57.895 0.00 0.00 37.11 2.90
4138 4255 2.279517 CAGGCGCATCCGGTACTC 60.280 66.667 10.83 0.00 40.77 2.59
4139 4256 2.180159 AAACAGGCGCATCCGGTACT 62.180 55.000 10.83 0.00 42.62 2.73
4141 4258 0.249676 TAAAACAGGCGCATCCGGTA 59.750 50.000 10.83 0.00 42.62 4.02
4143 4260 1.721487 CTAAAACAGGCGCATCCGG 59.279 57.895 10.83 0.00 40.77 5.14
4207 4327 4.069300 TGAAATGTCAGGCAATTGCAAA 57.931 36.364 30.32 13.07 44.36 3.68
4243 4363 2.231964 AGGCAATTGCAACATTCGACAT 59.768 40.909 30.32 0.00 44.36 3.06
4266 4386 5.571784 TGAGCAATGAACTCATGAAATCC 57.428 39.130 0.00 0.00 39.21 3.01
4279 4399 7.645402 CAAAATACATAGCAGATGAGCAATGA 58.355 34.615 5.69 0.00 36.85 2.57
4307 4433 5.045213 TGTGGAAGATAAATTAGTGCTGGGA 60.045 40.000 0.00 0.00 0.00 4.37
4316 4594 6.073058 GCGAGCATGATGTGGAAGATAAATTA 60.073 38.462 0.00 0.00 0.00 1.40
4332 4610 1.135139 GTTAGAGTCCAGCGAGCATGA 59.865 52.381 0.00 0.00 0.00 3.07
4339 4617 5.592054 TCATATCTTTGTTAGAGTCCAGCG 58.408 41.667 0.00 0.00 36.02 5.18
4346 4624 9.202273 GCTACCATTCTCATATCTTTGTTAGAG 57.798 37.037 0.00 0.00 36.02 2.43
4368 4646 3.379372 TCGAACACTACCATACCAGCTAC 59.621 47.826 0.00 0.00 0.00 3.58
4389 4667 2.599082 GGTGTGACGAGTTCGATCAATC 59.401 50.000 8.72 0.00 43.02 2.67
4403 4693 4.553938 CGTTTTCCACTACATTGGTGTGAC 60.554 45.833 11.26 3.29 39.39 3.67
4408 4698 2.552315 CAGCGTTTTCCACTACATTGGT 59.448 45.455 0.00 0.00 37.93 3.67
4419 4709 4.946784 ATAATCTGTGACAGCGTTTTCC 57.053 40.909 7.93 0.00 0.00 3.13
4434 4724 4.817286 AGGAACGGAGGGAGTAATAATCT 58.183 43.478 0.00 0.00 0.00 2.40
4439 4729 5.901276 TGTATTTAGGAACGGAGGGAGTAAT 59.099 40.000 0.00 0.00 0.00 1.89
4440 4730 5.127682 GTGTATTTAGGAACGGAGGGAGTAA 59.872 44.000 0.00 0.00 0.00 2.24
4445 4735 4.891756 TCTAGTGTATTTAGGAACGGAGGG 59.108 45.833 0.00 0.00 0.00 4.30
4446 4736 5.826737 TCTCTAGTGTATTTAGGAACGGAGG 59.173 44.000 0.00 0.00 0.00 4.30
4448 4738 7.893124 AATCTCTAGTGTATTTAGGAACGGA 57.107 36.000 0.00 0.00 0.00 4.69
4449 4739 8.943909 AAAATCTCTAGTGTATTTAGGAACGG 57.056 34.615 0.00 0.00 0.00 4.44
4461 4751 9.201989 TGTGATCCATAGTAAAATCTCTAGTGT 57.798 33.333 0.00 0.00 0.00 3.55
4477 4767 9.768215 TCTACATACATCCTTATGTGATCCATA 57.232 33.333 6.11 0.00 45.99 2.74
4479 4769 8.534496 CATCTACATACATCCTTATGTGATCCA 58.466 37.037 6.11 0.00 45.99 3.41
4480 4770 7.493971 GCATCTACATACATCCTTATGTGATCC 59.506 40.741 6.11 0.00 45.99 3.36
4481 4771 8.037166 TGCATCTACATACATCCTTATGTGATC 58.963 37.037 6.11 0.00 45.99 2.92
4484 4774 8.557592 AATGCATCTACATACATCCTTATGTG 57.442 34.615 0.00 0.00 45.99 3.21
4486 4776 9.223099 TGAAATGCATCTACATACATCCTTATG 57.777 33.333 0.00 0.00 39.17 1.90
4487 4777 9.445878 CTGAAATGCATCTACATACATCCTTAT 57.554 33.333 0.00 0.00 0.00 1.73
4488 4778 8.650490 TCTGAAATGCATCTACATACATCCTTA 58.350 33.333 0.00 0.00 0.00 2.69
4489 4779 7.512130 TCTGAAATGCATCTACATACATCCTT 58.488 34.615 0.00 0.00 0.00 3.36
4490 4780 7.071069 TCTGAAATGCATCTACATACATCCT 57.929 36.000 0.00 0.00 0.00 3.24
4491 4781 6.933521 ACTCTGAAATGCATCTACATACATCC 59.066 38.462 0.00 0.00 0.00 3.51
4492 4782 7.440556 ACACTCTGAAATGCATCTACATACATC 59.559 37.037 0.00 0.00 0.00 3.06
4493 4783 7.278135 ACACTCTGAAATGCATCTACATACAT 58.722 34.615 0.00 0.00 0.00 2.29
4494 4784 6.643388 ACACTCTGAAATGCATCTACATACA 58.357 36.000 0.00 0.00 0.00 2.29
4495 4785 8.138074 TCTACACTCTGAAATGCATCTACATAC 58.862 37.037 0.00 0.00 0.00 2.39
4496 4786 8.237811 TCTACACTCTGAAATGCATCTACATA 57.762 34.615 0.00 0.00 0.00 2.29
4497 4787 7.117285 TCTACACTCTGAAATGCATCTACAT 57.883 36.000 0.00 0.00 0.00 2.29
4498 4788 6.530019 TCTACACTCTGAAATGCATCTACA 57.470 37.500 0.00 0.00 0.00 2.74
4499 4789 7.708322 TGAATCTACACTCTGAAATGCATCTAC 59.292 37.037 0.00 0.00 0.00 2.59
4500 4790 7.708322 GTGAATCTACACTCTGAAATGCATCTA 59.292 37.037 0.00 0.00 37.73 1.98
4501 4791 6.538021 GTGAATCTACACTCTGAAATGCATCT 59.462 38.462 0.00 0.00 37.73 2.90
4502 4792 6.538021 AGTGAATCTACACTCTGAAATGCATC 59.462 38.462 0.00 0.00 46.36 3.91
4503 4793 6.413052 AGTGAATCTACACTCTGAAATGCAT 58.587 36.000 0.00 0.00 46.36 3.96
4504 4794 5.798132 AGTGAATCTACACTCTGAAATGCA 58.202 37.500 0.00 0.00 46.36 3.96
4515 4805 4.808364 GGAGCAAGATGAGTGAATCTACAC 59.192 45.833 0.00 0.00 35.83 2.90
4516 4806 4.440663 CGGAGCAAGATGAGTGAATCTACA 60.441 45.833 0.00 0.00 35.83 2.74
4517 4807 4.047822 CGGAGCAAGATGAGTGAATCTAC 58.952 47.826 0.00 0.00 35.83 2.59
4518 4808 3.701542 ACGGAGCAAGATGAGTGAATCTA 59.298 43.478 0.00 0.00 35.83 1.98
4519 4809 2.499289 ACGGAGCAAGATGAGTGAATCT 59.501 45.455 0.00 0.00 38.59 2.40
4520 4810 2.898705 ACGGAGCAAGATGAGTGAATC 58.101 47.619 0.00 0.00 0.00 2.52
4521 4811 4.141846 ACATACGGAGCAAGATGAGTGAAT 60.142 41.667 0.00 0.00 0.00 2.57
4522 4812 3.195610 ACATACGGAGCAAGATGAGTGAA 59.804 43.478 0.00 0.00 0.00 3.18
4523 4813 2.760650 ACATACGGAGCAAGATGAGTGA 59.239 45.455 0.00 0.00 0.00 3.41
4524 4814 3.170791 ACATACGGAGCAAGATGAGTG 57.829 47.619 0.00 0.00 0.00 3.51
4525 4815 3.954904 ACTACATACGGAGCAAGATGAGT 59.045 43.478 0.00 0.00 0.00 3.41
4526 4816 4.576216 ACTACATACGGAGCAAGATGAG 57.424 45.455 0.00 0.00 0.00 2.90
4527 4817 4.401202 TGAACTACATACGGAGCAAGATGA 59.599 41.667 0.00 0.00 0.00 2.92
4528 4818 4.682787 TGAACTACATACGGAGCAAGATG 58.317 43.478 0.00 0.00 0.00 2.90
4529 4819 5.537300 ATGAACTACATACGGAGCAAGAT 57.463 39.130 0.00 0.00 37.46 2.40
4530 4820 5.593095 ACTATGAACTACATACGGAGCAAGA 59.407 40.000 0.00 0.00 40.07 3.02
4531 4821 5.687730 CACTATGAACTACATACGGAGCAAG 59.312 44.000 0.00 0.00 40.07 4.01
4532 4822 5.358725 TCACTATGAACTACATACGGAGCAA 59.641 40.000 0.00 0.00 40.07 3.91
4533 4823 4.885325 TCACTATGAACTACATACGGAGCA 59.115 41.667 0.00 0.00 40.07 4.26
4534 4824 5.434352 TCACTATGAACTACATACGGAGC 57.566 43.478 0.00 0.00 40.07 4.70
4535 4825 8.353684 AGATTTCACTATGAACTACATACGGAG 58.646 37.037 0.00 0.00 35.89 4.63
4536 4826 8.234136 AGATTTCACTATGAACTACATACGGA 57.766 34.615 0.00 0.00 35.89 4.69
4537 4827 8.353684 AGAGATTTCACTATGAACTACATACGG 58.646 37.037 0.00 0.00 35.89 4.02
4545 4835 7.550906 GCCTTTGTAGAGATTTCACTATGAACT 59.449 37.037 0.00 0.00 35.89 3.01
4546 4836 7.550906 AGCCTTTGTAGAGATTTCACTATGAAC 59.449 37.037 0.00 0.00 35.89 3.18
4547 4837 7.624549 AGCCTTTGTAGAGATTTCACTATGAA 58.375 34.615 0.00 0.00 34.03 2.57
4548 4838 7.187824 AGCCTTTGTAGAGATTTCACTATGA 57.812 36.000 0.00 0.00 0.00 2.15
4549 4839 7.335422 ACAAGCCTTTGTAGAGATTTCACTATG 59.665 37.037 0.00 0.00 45.45 2.23
4550 4840 7.398024 ACAAGCCTTTGTAGAGATTTCACTAT 58.602 34.615 0.00 0.00 45.45 2.12
4551 4841 6.769512 ACAAGCCTTTGTAGAGATTTCACTA 58.230 36.000 0.00 0.00 45.45 2.74
4552 4842 5.625150 ACAAGCCTTTGTAGAGATTTCACT 58.375 37.500 0.00 0.00 45.45 3.41
4553 4843 5.948992 ACAAGCCTTTGTAGAGATTTCAC 57.051 39.130 0.00 0.00 45.45 3.18
4563 4853 3.306502 CGAAGGGAGTACAAGCCTTTGTA 60.307 47.826 0.00 0.00 45.45 2.41
4565 4855 2.076863 CGAAGGGAGTACAAGCCTTTG 58.923 52.381 0.00 0.00 40.24 2.77
4566 4856 1.697982 ACGAAGGGAGTACAAGCCTTT 59.302 47.619 0.00 0.00 0.00 3.11
4567 4857 1.349067 ACGAAGGGAGTACAAGCCTT 58.651 50.000 0.00 0.00 0.00 4.35
4568 4858 1.275573 GAACGAAGGGAGTACAAGCCT 59.724 52.381 0.00 0.00 0.00 4.58
4569 4859 1.001633 TGAACGAAGGGAGTACAAGCC 59.998 52.381 0.00 0.00 0.00 4.35
4570 4860 2.029290 TCTGAACGAAGGGAGTACAAGC 60.029 50.000 0.00 0.00 0.00 4.01
4571 4861 3.936372 TCTGAACGAAGGGAGTACAAG 57.064 47.619 0.00 0.00 0.00 3.16
4572 4862 4.884668 ATTCTGAACGAAGGGAGTACAA 57.115 40.909 0.00 0.00 34.56 2.41
4573 4863 4.884668 AATTCTGAACGAAGGGAGTACA 57.115 40.909 0.00 0.00 34.56 2.90
4574 4864 5.963594 AGTAATTCTGAACGAAGGGAGTAC 58.036 41.667 0.00 0.00 34.56 2.73
4575 4865 6.014840 ACAAGTAATTCTGAACGAAGGGAGTA 60.015 38.462 0.00 0.00 34.56 2.59
4576 4866 5.221661 ACAAGTAATTCTGAACGAAGGGAGT 60.222 40.000 0.00 0.00 34.56 3.85
4577 4867 5.238583 ACAAGTAATTCTGAACGAAGGGAG 58.761 41.667 0.00 0.00 34.56 4.30
4578 4868 5.223449 ACAAGTAATTCTGAACGAAGGGA 57.777 39.130 0.00 0.00 34.56 4.20
4579 4869 4.392138 GGACAAGTAATTCTGAACGAAGGG 59.608 45.833 0.00 0.00 34.56 3.95
4580 4870 4.994852 TGGACAAGTAATTCTGAACGAAGG 59.005 41.667 0.00 0.00 34.56 3.46
4581 4871 6.423905 TCTTGGACAAGTAATTCTGAACGAAG 59.576 38.462 11.44 0.00 39.38 3.79
4582 4872 6.285224 TCTTGGACAAGTAATTCTGAACGAA 58.715 36.000 11.44 0.00 39.38 3.85
4583 4873 5.849510 TCTTGGACAAGTAATTCTGAACGA 58.150 37.500 11.44 0.00 39.38 3.85
4584 4874 6.539649 TTCTTGGACAAGTAATTCTGAACG 57.460 37.500 11.44 0.00 39.38 3.95
4585 4875 8.567948 TCAATTCTTGGACAAGTAATTCTGAAC 58.432 33.333 11.44 0.00 39.38 3.18
4586 4876 8.690203 TCAATTCTTGGACAAGTAATTCTGAA 57.310 30.769 11.44 0.00 39.38 3.02
4587 4877 8.690203 TTCAATTCTTGGACAAGTAATTCTGA 57.310 30.769 11.44 8.70 39.38 3.27
4588 4878 9.350357 CATTCAATTCTTGGACAAGTAATTCTG 57.650 33.333 11.44 7.05 39.38 3.02
4589 4879 9.082313 ACATTCAATTCTTGGACAAGTAATTCT 57.918 29.630 11.44 2.99 39.38 2.40
4593 4883 9.739276 AGATACATTCAATTCTTGGACAAGTAA 57.261 29.630 11.44 5.86 39.38 2.24
4595 4885 9.388506 CTAGATACATTCAATTCTTGGACAAGT 57.611 33.333 11.44 0.00 39.38 3.16
4596 4886 9.605275 TCTAGATACATTCAATTCTTGGACAAG 57.395 33.333 5.72 5.72 39.71 3.16
4598 4888 9.551734 CATCTAGATACATTCAATTCTTGGACA 57.448 33.333 4.54 0.00 0.00 4.02
4599 4889 9.553064 ACATCTAGATACATTCAATTCTTGGAC 57.447 33.333 4.54 0.00 0.00 4.02
4630 4920 9.952030 TCACAAAAATGGATGTATCTACAACTA 57.048 29.630 0.00 0.00 39.99 2.24
4631 4921 8.730680 GTCACAAAAATGGATGTATCTACAACT 58.269 33.333 0.00 0.00 39.99 3.16
4632 4922 8.511321 TGTCACAAAAATGGATGTATCTACAAC 58.489 33.333 0.00 0.00 39.99 3.32
4633 4923 8.628630 TGTCACAAAAATGGATGTATCTACAA 57.371 30.769 0.00 0.00 39.99 2.41
4634 4924 8.628630 TTGTCACAAAAATGGATGTATCTACA 57.371 30.769 0.00 0.00 40.98 2.74
4635 4925 8.730680 ACTTGTCACAAAAATGGATGTATCTAC 58.269 33.333 0.00 0.00 0.00 2.59
4636 4926 8.862325 ACTTGTCACAAAAATGGATGTATCTA 57.138 30.769 0.00 0.00 0.00 1.98
4637 4927 7.765695 ACTTGTCACAAAAATGGATGTATCT 57.234 32.000 0.00 0.00 0.00 1.98
4640 4930 9.906660 GAATTACTTGTCACAAAAATGGATGTA 57.093 29.630 0.00 0.00 0.00 2.29
4641 4931 7.872483 GGAATTACTTGTCACAAAAATGGATGT 59.128 33.333 0.00 0.00 0.00 3.06
4642 4932 7.062138 CGGAATTACTTGTCACAAAAATGGATG 59.938 37.037 0.00 0.00 0.00 3.51
4643 4933 7.040062 TCGGAATTACTTGTCACAAAAATGGAT 60.040 33.333 0.00 0.00 0.00 3.41
4644 4934 6.263392 TCGGAATTACTTGTCACAAAAATGGA 59.737 34.615 0.00 0.00 0.00 3.41
4645 4935 6.362283 GTCGGAATTACTTGTCACAAAAATGG 59.638 38.462 0.00 0.00 0.00 3.16
4646 4936 6.362283 GGTCGGAATTACTTGTCACAAAAATG 59.638 38.462 0.00 0.00 0.00 2.32
4647 4937 6.443792 GGTCGGAATTACTTGTCACAAAAAT 58.556 36.000 0.00 0.00 0.00 1.82
4648 4938 5.504337 CGGTCGGAATTACTTGTCACAAAAA 60.504 40.000 0.00 0.00 0.00 1.94
4649 4939 4.024725 CGGTCGGAATTACTTGTCACAAAA 60.025 41.667 0.00 0.00 0.00 2.44
4650 4940 3.495377 CGGTCGGAATTACTTGTCACAAA 59.505 43.478 0.00 0.00 0.00 2.83
4651 4941 3.061322 CGGTCGGAATTACTTGTCACAA 58.939 45.455 0.00 0.00 0.00 3.33
4652 4942 2.610976 CCGGTCGGAATTACTTGTCACA 60.611 50.000 2.83 0.00 37.50 3.58
4653 4943 1.997606 CCGGTCGGAATTACTTGTCAC 59.002 52.381 2.83 0.00 37.50 3.67
4654 4944 1.894466 TCCGGTCGGAATTACTTGTCA 59.106 47.619 9.90 0.00 42.05 3.58
4655 4945 2.537401 CTCCGGTCGGAATTACTTGTC 58.463 52.381 13.36 0.00 44.66 3.18
4656 4946 1.206371 CCTCCGGTCGGAATTACTTGT 59.794 52.381 13.36 0.00 44.66 3.16
4657 4947 1.472728 CCCTCCGGTCGGAATTACTTG 60.473 57.143 13.36 0.07 44.66 3.16
4658 4948 0.828677 CCCTCCGGTCGGAATTACTT 59.171 55.000 13.36 0.00 44.66 2.24
4659 4949 0.032813 TCCCTCCGGTCGGAATTACT 60.033 55.000 13.36 0.00 44.66 2.24
4660 4950 0.388294 CTCCCTCCGGTCGGAATTAC 59.612 60.000 13.36 0.00 44.66 1.89
4661 4951 0.032813 ACTCCCTCCGGTCGGAATTA 60.033 55.000 13.36 1.04 44.66 1.40
4662 4952 0.032813 TACTCCCTCCGGTCGGAATT 60.033 55.000 13.36 6.41 44.66 2.17
4663 4953 0.187851 ATACTCCCTCCGGTCGGAAT 59.812 55.000 13.36 6.46 44.66 3.01
4664 4954 0.032813 AATACTCCCTCCGGTCGGAA 60.033 55.000 13.36 0.00 44.66 4.30
4665 4955 0.032813 AAATACTCCCTCCGGTCGGA 60.033 55.000 11.83 11.83 42.90 4.55
4666 4956 1.612463 CTAAATACTCCCTCCGGTCGG 59.388 57.143 0.00 2.52 0.00 4.79
4667 4957 2.579873 TCTAAATACTCCCTCCGGTCG 58.420 52.381 0.00 0.00 0.00 4.79
4668 4958 5.298347 CATTTCTAAATACTCCCTCCGGTC 58.702 45.833 0.00 0.00 0.00 4.79
4669 4959 4.102681 CCATTTCTAAATACTCCCTCCGGT 59.897 45.833 0.00 0.00 0.00 5.28
4670 4960 4.347000 TCCATTTCTAAATACTCCCTCCGG 59.653 45.833 0.00 0.00 0.00 5.14
4671 4961 5.511545 CCTCCATTTCTAAATACTCCCTCCG 60.512 48.000 0.00 0.00 0.00 4.63
4672 4962 5.221945 CCCTCCATTTCTAAATACTCCCTCC 60.222 48.000 0.00 0.00 0.00 4.30
4673 4963 5.607171 TCCCTCCATTTCTAAATACTCCCTC 59.393 44.000 0.00 0.00 0.00 4.30
4674 4964 5.548573 TCCCTCCATTTCTAAATACTCCCT 58.451 41.667 0.00 0.00 0.00 4.20
4675 4965 5.369993 ACTCCCTCCATTTCTAAATACTCCC 59.630 44.000 0.00 0.00 0.00 4.30
4676 4966 6.502074 ACTCCCTCCATTTCTAAATACTCC 57.498 41.667 0.00 0.00 0.00 3.85
4677 4967 8.480133 TCTACTCCCTCCATTTCTAAATACTC 57.520 38.462 0.00 0.00 0.00 2.59
4678 4968 8.855804 TTCTACTCCCTCCATTTCTAAATACT 57.144 34.615 0.00 0.00 0.00 2.12
4679 4969 9.549078 CTTTCTACTCCCTCCATTTCTAAATAC 57.451 37.037 0.00 0.00 0.00 1.89
4680 4970 9.280456 ACTTTCTACTCCCTCCATTTCTAAATA 57.720 33.333 0.00 0.00 0.00 1.40
4681 4971 8.164057 ACTTTCTACTCCCTCCATTTCTAAAT 57.836 34.615 0.00 0.00 0.00 1.40
4682 4972 7.569599 ACTTTCTACTCCCTCCATTTCTAAA 57.430 36.000 0.00 0.00 0.00 1.85
4683 4973 7.899709 ACTACTTTCTACTCCCTCCATTTCTAA 59.100 37.037 0.00 0.00 0.00 2.10
4684 4974 7.420029 ACTACTTTCTACTCCCTCCATTTCTA 58.580 38.462 0.00 0.00 0.00 2.10
4685 4975 6.265304 ACTACTTTCTACTCCCTCCATTTCT 58.735 40.000 0.00 0.00 0.00 2.52
4686 4976 6.547930 ACTACTTTCTACTCCCTCCATTTC 57.452 41.667 0.00 0.00 0.00 2.17
4687 4977 8.445361 TTTACTACTTTCTACTCCCTCCATTT 57.555 34.615 0.00 0.00 0.00 2.32
4688 4978 8.445361 TTTTACTACTTTCTACTCCCTCCATT 57.555 34.615 0.00 0.00 0.00 3.16
4689 4979 7.899709 TCTTTTACTACTTTCTACTCCCTCCAT 59.100 37.037 0.00 0.00 0.00 3.41
4690 4980 7.243824 TCTTTTACTACTTTCTACTCCCTCCA 58.756 38.462 0.00 0.00 0.00 3.86
4691 4981 7.715266 TCTTTTACTACTTTCTACTCCCTCC 57.285 40.000 0.00 0.00 0.00 4.30
4726 5016 8.913487 ATGTGAAAACATGCATATCTCATAGA 57.087 30.769 0.00 0.00 0.00 1.98
4729 5019 6.776116 AGGATGTGAAAACATGCATATCTCAT 59.224 34.615 12.04 8.30 40.29 2.90
4731 5021 6.436261 CAGGATGTGAAAACATGCATATCTC 58.564 40.000 12.04 0.00 40.29 2.75
4751 5041 4.825085 GGTCAATTTTTGTAGGTGACAGGA 59.175 41.667 4.67 0.00 40.28 3.86
4753 5043 4.320202 CGGGTCAATTTTTGTAGGTGACAG 60.320 45.833 4.67 0.00 40.28 3.51
4854 5184 7.170151 ACACTAACAAAAACGAACTTGCTTTTT 59.830 29.630 0.00 0.00 0.00 1.94
4855 5185 6.643360 ACACTAACAAAAACGAACTTGCTTTT 59.357 30.769 0.00 0.00 0.00 2.27
4860 5190 7.465989 TCCTAACACTAACAAAAACGAACTTG 58.534 34.615 0.00 0.00 0.00 3.16
4863 5193 8.672214 TTTTCCTAACACTAACAAAAACGAAC 57.328 30.769 0.00 0.00 0.00 3.95
4910 5241 1.133668 ACATATGGCCTGCTTTCTCCC 60.134 52.381 3.32 0.00 0.00 4.30
4933 5264 1.696097 GGACCGGCCCATGTGACTAT 61.696 60.000 0.00 0.00 0.00 2.12
4934 5265 2.363975 GGACCGGCCCATGTGACTA 61.364 63.158 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.