Multiple sequence alignment - TraesCS4D01G289400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G289400 chr4D 100.000 5687 0 0 1 5687 460560876 460566562 0.000000e+00 10503.0
1 TraesCS4D01G289400 chr4D 85.835 826 66 20 4889 5687 460646431 460647232 0.000000e+00 830.0
2 TraesCS4D01G289400 chr4D 89.165 563 37 11 5148 5687 460651654 460652215 0.000000e+00 680.0
3 TraesCS4D01G289400 chr4D 85.516 649 58 16 5030 5677 460582883 460583496 0.000000e+00 645.0
4 TraesCS4D01G289400 chr4D 89.492 295 16 4 4246 4538 460645766 460646047 5.420000e-95 359.0
5 TraesCS4D01G289400 chr4D 86.557 305 22 9 4538 4824 460646123 460646426 9.190000e-83 318.0
6 TraesCS4D01G289400 chr4D 85.152 330 19 10 4507 4815 460650939 460651259 1.540000e-80 311.0
7 TraesCS4D01G289400 chr4D 93.158 190 13 0 3862 4051 460585954 460586143 4.340000e-71 279.0
8 TraesCS4D01G289400 chr4D 88.889 171 9 7 4812 4975 460651405 460651572 9.660000e-48 202.0
9 TraesCS4D01G289400 chr4D 88.415 164 8 2 279 432 460560976 460561138 2.710000e-43 187.0
10 TraesCS4D01G289400 chr4D 90.840 131 11 1 4891 5020 460659229 460659359 2.110000e-39 174.0
11 TraesCS4D01G289400 chr4D 80.928 194 35 2 95 287 19206612 19206420 9.870000e-33 152.0
12 TraesCS4D01G289400 chr4D 83.803 142 5 4 4901 5024 460582187 460582328 1.000000e-22 119.0
13 TraesCS4D01G289400 chr4D 90.909 66 5 1 4684 4749 460657147 460657211 2.820000e-13 87.9
14 TraesCS4D01G289400 chr4D 90.909 66 5 1 4684 4749 460658725 460658789 2.820000e-13 87.9
15 TraesCS4D01G289400 chr4D 90.909 66 5 1 4684 4749 460663626 460663690 2.820000e-13 87.9
16 TraesCS4D01G289400 chr4D 90.909 66 5 1 4684 4749 460667164 460667228 2.820000e-13 87.9
17 TraesCS4D01G289400 chr4A 91.847 1386 76 11 844 2200 7741965 7740588 0.000000e+00 1899.0
18 TraesCS4D01G289400 chr4A 90.637 1036 67 15 2282 3307 7740589 7739574 0.000000e+00 1349.0
19 TraesCS4D01G289400 chr4A 90.668 1018 57 16 3693 4699 7739310 7738320 0.000000e+00 1319.0
20 TraesCS4D01G289400 chr4A 91.884 727 39 6 3862 4588 7613654 7612948 0.000000e+00 998.0
21 TraesCS4D01G289400 chr4A 87.671 803 62 19 4901 5687 7616973 7616192 0.000000e+00 900.0
22 TraesCS4D01G289400 chr4A 94.687 527 28 0 5161 5687 7737763 7737237 0.000000e+00 819.0
23 TraesCS4D01G289400 chr4A 86.813 546 44 13 5147 5677 7612450 7611918 8.210000e-163 584.0
24 TraesCS4D01G289400 chr4A 87.462 327 30 5 437 755 7742319 7741996 3.240000e-97 366.0
25 TraesCS4D01G289400 chr4A 86.897 290 27 8 1 281 716386348 716386635 1.190000e-81 315.0
26 TraesCS4D01G289400 chr4A 89.083 229 22 2 53 281 716387224 716387449 1.210000e-71 281.0
27 TraesCS4D01G289400 chr4A 92.481 133 5 3 4889 5020 7612644 7612516 9.730000e-43 185.0
28 TraesCS4D01G289400 chr4A 100.000 30 0 0 814 843 7741970 7741941 7.960000e-04 56.5
29 TraesCS4D01G289400 chr4B 91.667 1380 84 17 833 2200 575038625 575039985 0.000000e+00 1882.0
30 TraesCS4D01G289400 chr4B 89.601 1327 83 33 2011 3319 575684814 575683525 0.000000e+00 1635.0
31 TraesCS4D01G289400 chr4B 89.224 1327 89 32 2011 3319 575629591 575628301 0.000000e+00 1609.0
32 TraesCS4D01G289400 chr4B 93.570 1042 47 11 2282 3313 575039984 575041015 0.000000e+00 1535.0
33 TraesCS4D01G289400 chr4B 87.788 1302 93 20 3680 4971 575041186 575042431 0.000000e+00 1463.0
34 TraesCS4D01G289400 chr4B 91.876 1034 77 2 1153 2179 404450793 404451826 0.000000e+00 1437.0
35 TraesCS4D01G289400 chr4B 85.159 1287 92 31 4261 5518 575624335 575623119 0.000000e+00 1227.0
36 TraesCS4D01G289400 chr4B 92.095 797 28 7 2409 3201 404451969 404452734 0.000000e+00 1090.0
37 TraesCS4D01G289400 chr4B 88.987 681 54 10 5015 5687 575042439 575043106 0.000000e+00 822.0
38 TraesCS4D01G289400 chr4B 93.284 536 35 1 5152 5687 575664524 575663990 0.000000e+00 789.0
39 TraesCS4D01G289400 chr4B 85.393 801 69 23 4901 5687 575660458 575659692 0.000000e+00 787.0
40 TraesCS4D01G289400 chr4B 92.415 501 31 4 3764 4262 575625393 575624898 0.000000e+00 708.0
41 TraesCS4D01G289400 chr4B 92.566 417 29 2 3759 4175 575668013 575667599 1.050000e-166 597.0
42 TraesCS4D01G289400 chr4B 84.286 630 55 19 4511 5119 575665132 575664526 4.940000e-160 575.0
43 TraesCS4D01G289400 chr4B 89.398 415 22 4 3367 3762 575628221 575627810 2.370000e-138 503.0
44 TraesCS4D01G289400 chr4B 88.916 415 22 9 3367 3762 575683445 575683036 1.840000e-134 490.0
45 TraesCS4D01G289400 chr4B 85.068 221 10 8 4261 4481 575666965 575666768 2.690000e-48 204.0
46 TraesCS4D01G289400 chr4B 94.574 129 6 1 4889 5016 575651469 575651341 1.250000e-46 198.0
47 TraesCS4D01G289400 chr4B 91.473 129 10 1 4889 5016 575047276 575047404 5.860000e-40 176.0
48 TraesCS4D01G289400 chr4B 92.929 99 7 0 2190 2288 20800498 20800596 1.650000e-30 145.0
49 TraesCS4D01G289400 chr4B 87.879 66 7 1 4684 4749 575651953 575651889 6.110000e-10 76.8
50 TraesCS4D01G289400 chr5B 92.088 1049 76 2 1159 2200 398394294 398393246 0.000000e+00 1471.0
51 TraesCS4D01G289400 chr5B 91.272 928 40 10 2282 3201 398393247 398392353 0.000000e+00 1227.0
52 TraesCS4D01G289400 chr2B 78.059 752 105 31 4979 5687 17206768 17206034 2.450000e-113 420.0
53 TraesCS4D01G289400 chr2B 93.548 93 4 2 2199 2291 421181408 421181318 2.760000e-28 137.0
54 TraesCS4D01G289400 chr2A 92.042 289 20 2 1 286 774565848 774566136 2.470000e-108 403.0
55 TraesCS4D01G289400 chr2A 85.366 164 13 8 279 432 774565948 774566110 5.900000e-35 159.0
56 TraesCS4D01G289400 chr3A 91.228 285 25 0 1 285 57620054 57620338 6.910000e-104 388.0
57 TraesCS4D01G289400 chr3A 82.143 308 44 6 1902 2199 729711712 729711406 2.630000e-63 254.0
58 TraesCS4D01G289400 chr3A 93.220 118 7 1 279 396 57620154 57620270 7.580000e-39 172.0
59 TraesCS4D01G289400 chr3A 84.516 155 14 4 287 431 705255072 705254918 1.650000e-30 145.0
60 TraesCS4D01G289400 chr2D 78.187 651 93 22 4979 5595 11127301 11127936 2.500000e-98 370.0
61 TraesCS4D01G289400 chr2D 94.444 90 5 0 2199 2288 525715432 525715521 7.680000e-29 139.0
62 TraesCS4D01G289400 chr2D 80.952 189 19 11 5509 5682 11165330 11165516 3.570000e-27 134.0
63 TraesCS4D01G289400 chr1D 83.416 404 45 11 1221 1622 457034729 457035112 7.010000e-94 355.0
64 TraesCS4D01G289400 chrUn 76.011 742 112 32 4979 5687 12499616 12500324 1.980000e-84 324.0
65 TraesCS4D01G289400 chrUn 87.805 246 22 2 41 286 67142053 67142290 1.210000e-71 281.0
66 TraesCS4D01G289400 chr6A 88.561 271 20 2 1 271 37832340 37832081 9.190000e-83 318.0
67 TraesCS4D01G289400 chr6A 82.877 292 40 6 1 282 399715320 399715611 2.630000e-63 254.0
68 TraesCS4D01G289400 chr6A 94.000 150 9 0 286 435 37832235 37832086 1.590000e-55 228.0
69 TraesCS4D01G289400 chr6A 81.212 165 18 5 280 431 36489606 36489442 2.780000e-23 121.0
70 TraesCS4D01G289400 chr6A 82.796 93 8 5 41 129 530260966 530261054 6.110000e-10 76.8
71 TraesCS4D01G289400 chr1A 86.268 284 37 2 1 282 337975852 337976135 1.990000e-79 307.0
72 TraesCS4D01G289400 chr1A 95.506 89 4 0 2199 2287 518662845 518662757 5.940000e-30 143.0
73 TraesCS4D01G289400 chr1A 79.755 163 21 11 280 435 516005263 516005106 2.170000e-19 108.0
74 TraesCS4D01G289400 chr1A 95.455 44 2 0 392 435 550350685 550350642 2.840000e-08 71.3
75 TraesCS4D01G289400 chr1B 89.565 230 24 0 1153 1382 566147085 566146856 5.570000e-75 292.0
76 TraesCS4D01G289400 chr7A 81.268 347 54 9 1823 2162 465440333 465439991 2.610000e-68 270.0
77 TraesCS4D01G289400 chr6B 92.405 158 11 1 130 286 88304734 88304577 2.060000e-54 224.0
78 TraesCS4D01G289400 chr6B 95.506 89 4 0 2196 2284 472612058 472612146 5.940000e-30 143.0
79 TraesCS4D01G289400 chr6B 95.556 90 3 1 2199 2287 474189287 474189198 5.940000e-30 143.0
80 TraesCS4D01G289400 chr6B 94.444 90 5 0 2199 2288 359864635 359864724 7.680000e-29 139.0
81 TraesCS4D01G289400 chr6B 91.304 46 3 1 387 432 184762338 184762294 1.710000e-05 62.1
82 TraesCS4D01G289400 chr7B 93.617 94 5 1 2199 2291 639796283 639796190 7.680000e-29 139.0
83 TraesCS4D01G289400 chr3B 93.548 93 5 1 2197 2288 435816978 435816886 2.760000e-28 137.0
84 TraesCS4D01G289400 chr5A 80.380 158 20 5 289 435 520624832 520624675 6.020000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G289400 chr4D 460560876 460566562 5686 False 10503.000000 10503 100.000000 1 5687 1 chr4D.!!$F1 5686
1 TraesCS4D01G289400 chr4D 460645766 460652215 6449 False 450.000000 830 87.515000 4246 5687 6 chr4D.!!$F4 1441
2 TraesCS4D01G289400 chr4D 460582187 460586143 3956 False 347.666667 645 87.492333 3862 5677 3 chr4D.!!$F3 1815
3 TraesCS4D01G289400 chr4A 7737237 7742319 5082 True 968.083333 1899 92.550167 437 5687 6 chr4A.!!$R2 5250
4 TraesCS4D01G289400 chr4A 7611918 7616973 5055 True 666.750000 998 89.712250 3862 5687 4 chr4A.!!$R1 1825
5 TraesCS4D01G289400 chr4A 716386348 716387449 1101 False 298.000000 315 87.990000 1 281 2 chr4A.!!$F1 280
6 TraesCS4D01G289400 chr4B 575038625 575043106 4481 False 1425.500000 1882 90.503000 833 5687 4 chr4B.!!$F4 4854
7 TraesCS4D01G289400 chr4B 404450793 404452734 1941 False 1263.500000 1437 91.985500 1153 3201 2 chr4B.!!$F3 2048
8 TraesCS4D01G289400 chr4B 575683036 575684814 1778 True 1062.500000 1635 89.258500 2011 3762 2 chr4B.!!$R4 1751
9 TraesCS4D01G289400 chr4B 575623119 575629591 6472 True 1011.750000 1609 89.049000 2011 5518 4 chr4B.!!$R1 3507
10 TraesCS4D01G289400 chr4B 575659692 575668013 8321 True 590.400000 789 88.119400 3759 5687 5 chr4B.!!$R3 1928
11 TraesCS4D01G289400 chr5B 398392353 398394294 1941 True 1349.000000 1471 91.680000 1159 3201 2 chr5B.!!$R1 2042
12 TraesCS4D01G289400 chr2B 17206034 17206768 734 True 420.000000 420 78.059000 4979 5687 1 chr2B.!!$R1 708
13 TraesCS4D01G289400 chr2D 11127301 11127936 635 False 370.000000 370 78.187000 4979 5595 1 chr2D.!!$F1 616
14 TraesCS4D01G289400 chrUn 12499616 12500324 708 False 324.000000 324 76.011000 4979 5687 1 chrUn.!!$F1 708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
404 414 0.035820 TGGGTCGTGGGACTAATTGC 60.036 55.000 0.00 0.00 42.97 3.56 F
834 852 0.555769 TGGAACTCAAGGGGCACTTT 59.444 50.000 0.00 0.00 37.29 2.66 F
886 904 0.782384 ACAAACTAACGCGCTCTTCG 59.218 50.000 5.73 0.00 42.12 3.79 F
1427 1464 1.002087 CTGGTTCCAGGTCAGTACACC 59.998 57.143 10.71 0.00 36.58 4.16 F
1428 1465 1.053424 GGTTCCAGGTCAGTACACCA 58.947 55.000 5.26 0.00 39.16 4.17 F
1433 1470 1.208052 CCAGGTCAGTACACCATCTGG 59.792 57.143 5.26 4.70 39.16 3.86 F
2118 2169 1.344953 ATGCTGAAGGGCCATCGGTA 61.345 55.000 18.17 14.65 0.00 4.02 F
4086 6792 0.392193 ATCTTGTGAAGCCAGAGCCG 60.392 55.000 0.00 0.00 41.25 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1773 1813 0.395686 ATGGGATGTCTGCGAGGATG 59.604 55.000 0.00 0.0 0.00 3.51 R
1925 1969 1.069296 TCAAATTTCAGAAGCGTGCGG 60.069 47.619 0.00 0.0 0.00 5.69 R
2873 3024 1.329599 GAAAGTCGCAAACCTTGTCGT 59.670 47.619 0.00 0.0 33.85 4.34 R
3405 3641 3.743132 TGGGGTGGTGGTTATAGATTCT 58.257 45.455 0.00 0.0 0.00 2.40 R
3406 3642 4.513406 TTGGGGTGGTGGTTATAGATTC 57.487 45.455 0.00 0.0 0.00 2.52 R
3471 3707 1.327303 GCACATGTTTTGACAGGGGA 58.673 50.000 0.00 0.0 0.00 4.81 R
4094 6800 0.249868 TGTCTGTCAAGCGACCTTGG 60.250 55.000 3.86 0.0 46.69 3.61 R
5006 9912 0.247419 GCACTCACGAATGACGCATG 60.247 55.000 0.00 0.0 46.94 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.282195 CGCTAATGAAGGGAGAGAGGTTAT 59.718 45.833 0.00 0.00 40.56 1.89
28 29 3.776731 TGAAGGGAGAGAGGTTATCCA 57.223 47.619 0.00 0.00 34.62 3.41
31 32 4.410228 TGAAGGGAGAGAGGTTATCCAATG 59.590 45.833 0.00 0.00 34.62 2.82
32 33 4.286813 AGGGAGAGAGGTTATCCAATGA 57.713 45.455 0.00 0.00 34.62 2.57
66 67 0.319986 TGCGTTGCGTGATTGTAGGA 60.320 50.000 0.00 0.00 0.00 2.94
69 70 2.066262 CGTTGCGTGATTGTAGGAGTT 58.934 47.619 0.00 0.00 0.00 3.01
70 71 2.478894 CGTTGCGTGATTGTAGGAGTTT 59.521 45.455 0.00 0.00 0.00 2.66
71 72 3.423123 CGTTGCGTGATTGTAGGAGTTTC 60.423 47.826 0.00 0.00 0.00 2.78
72 73 2.695359 TGCGTGATTGTAGGAGTTTCC 58.305 47.619 0.00 0.00 36.58 3.13
74 75 2.673043 GCGTGATTGTAGGAGTTTCCGA 60.673 50.000 0.00 0.00 42.75 4.55
75 76 3.782046 CGTGATTGTAGGAGTTTCCGAT 58.218 45.455 0.00 0.00 42.75 4.18
77 78 3.309954 GTGATTGTAGGAGTTTCCGATGC 59.690 47.826 0.00 0.00 42.75 3.91
88 98 4.935495 CCGATGCGGGATGTGGGG 62.935 72.222 0.00 0.00 44.15 4.96
111 121 3.950232 TCCTCGGTGGAGTATGGC 58.050 61.111 0.00 0.00 40.56 4.40
112 122 1.760875 TCCTCGGTGGAGTATGGCC 60.761 63.158 0.00 0.00 40.56 5.36
113 123 2.063979 CCTCGGTGGAGTATGGCCA 61.064 63.158 8.56 8.56 38.70 5.36
114 124 1.443407 CTCGGTGGAGTATGGCCAG 59.557 63.158 13.05 0.00 35.77 4.85
115 125 1.305802 TCGGTGGAGTATGGCCAGT 60.306 57.895 13.05 1.84 35.77 4.00
116 126 1.144057 CGGTGGAGTATGGCCAGTC 59.856 63.158 13.05 7.85 35.77 3.51
117 127 1.613317 CGGTGGAGTATGGCCAGTCA 61.613 60.000 13.05 1.65 35.77 3.41
144 154 2.198827 TTGCCAAGTCCACACCATAG 57.801 50.000 0.00 0.00 0.00 2.23
162 172 9.334947 ACACCATAGAATTGTTAGATCAATGAG 57.665 33.333 0.00 0.00 37.96 2.90
165 175 7.941238 CCATAGAATTGTTAGATCAATGAGGGT 59.059 37.037 0.00 0.00 37.96 4.34
174 184 8.328758 TGTTAGATCAATGAGGGTTGTTAGATT 58.671 33.333 0.00 0.00 0.00 2.40
180 190 7.405292 TCAATGAGGGTTGTTAGATTGAGATT 58.595 34.615 0.00 0.00 0.00 2.40
203 213 1.408340 TGGACAAATTGTGTGGTGCTG 59.592 47.619 2.20 0.00 41.96 4.41
211 221 1.152963 GTGTGGTGCTGACTGGGTT 60.153 57.895 0.00 0.00 0.00 4.11
257 267 3.153919 GGGGTGCACATAAGAAAGTTCA 58.846 45.455 20.43 0.00 0.00 3.18
282 292 9.787532 CATGTTTGATTGTTTAATAGTAGTGGG 57.212 33.333 0.00 0.00 0.00 4.61
283 293 8.343168 TGTTTGATTGTTTAATAGTAGTGGGG 57.657 34.615 0.00 0.00 0.00 4.96
284 294 8.164733 TGTTTGATTGTTTAATAGTAGTGGGGA 58.835 33.333 0.00 0.00 0.00 4.81
287 297 9.841295 TTGATTGTTTAATAGTAGTGGGGATAC 57.159 33.333 0.00 0.00 0.00 2.24
290 300 5.898972 TGTTTAATAGTAGTGGGGATACGGT 59.101 40.000 0.00 0.00 37.60 4.83
291 301 6.040842 TGTTTAATAGTAGTGGGGATACGGTC 59.959 42.308 0.00 0.00 37.60 4.79
292 302 3.889859 ATAGTAGTGGGGATACGGTCA 57.110 47.619 0.00 0.00 37.60 4.02
293 303 2.068834 AGTAGTGGGGATACGGTCAG 57.931 55.000 0.00 0.00 37.60 3.51
295 305 1.680207 GTAGTGGGGATACGGTCAGTC 59.320 57.143 0.00 0.00 37.60 3.51
296 306 0.040646 AGTGGGGATACGGTCAGTCA 59.959 55.000 0.00 0.00 37.60 3.41
297 307 1.120530 GTGGGGATACGGTCAGTCAT 58.879 55.000 0.00 0.00 37.60 3.06
298 308 1.485066 GTGGGGATACGGTCAGTCATT 59.515 52.381 0.00 0.00 37.60 2.57
299 309 1.484653 TGGGGATACGGTCAGTCATTG 59.515 52.381 0.00 0.00 37.60 2.82
300 310 1.202651 GGGGATACGGTCAGTCATTGG 60.203 57.143 0.00 0.00 37.60 3.16
301 311 1.760613 GGGATACGGTCAGTCATTGGA 59.239 52.381 0.00 0.00 37.60 3.53
302 312 2.169769 GGGATACGGTCAGTCATTGGAA 59.830 50.000 0.00 0.00 37.60 3.53
303 313 3.370103 GGGATACGGTCAGTCATTGGAAA 60.370 47.826 0.00 0.00 37.60 3.13
304 314 4.451900 GGATACGGTCAGTCATTGGAAAT 58.548 43.478 0.00 0.00 0.00 2.17
305 315 4.881850 GGATACGGTCAGTCATTGGAAATT 59.118 41.667 0.00 0.00 0.00 1.82
306 316 5.220854 GGATACGGTCAGTCATTGGAAATTG 60.221 44.000 0.00 0.00 0.00 2.32
307 317 2.228822 ACGGTCAGTCATTGGAAATTGC 59.771 45.455 0.00 0.00 0.00 3.56
308 318 2.728846 CGGTCAGTCATTGGAAATTGCG 60.729 50.000 0.00 0.00 0.00 4.85
309 319 2.487762 GGTCAGTCATTGGAAATTGCGA 59.512 45.455 0.00 0.00 0.00 5.10
310 320 3.057596 GGTCAGTCATTGGAAATTGCGAA 60.058 43.478 0.00 0.00 0.00 4.70
311 321 4.161333 GTCAGTCATTGGAAATTGCGAAG 58.839 43.478 0.00 0.00 0.00 3.79
312 322 3.820467 TCAGTCATTGGAAATTGCGAAGT 59.180 39.130 0.00 0.00 0.00 3.01
313 323 4.083324 TCAGTCATTGGAAATTGCGAAGTC 60.083 41.667 0.00 0.00 0.00 3.01
314 324 3.191371 AGTCATTGGAAATTGCGAAGTCC 59.809 43.478 0.00 0.14 0.00 3.85
315 325 3.057596 GTCATTGGAAATTGCGAAGTCCA 60.058 43.478 5.09 5.09 38.39 4.02
316 326 3.057596 TCATTGGAAATTGCGAAGTCCAC 60.058 43.478 8.21 0.00 39.86 4.02
317 327 1.974265 TGGAAATTGCGAAGTCCACA 58.026 45.000 5.09 0.00 35.22 4.17
318 328 1.606668 TGGAAATTGCGAAGTCCACAC 59.393 47.619 5.09 0.00 35.22 3.82
319 329 1.068541 GGAAATTGCGAAGTCCACACC 60.069 52.381 2.07 0.00 0.00 4.16
320 330 1.606668 GAAATTGCGAAGTCCACACCA 59.393 47.619 0.00 0.00 0.00 4.17
321 331 1.909700 AATTGCGAAGTCCACACCAT 58.090 45.000 0.00 0.00 0.00 3.55
322 332 2.779755 ATTGCGAAGTCCACACCATA 57.220 45.000 0.00 0.00 0.00 2.74
323 333 2.093306 TTGCGAAGTCCACACCATAG 57.907 50.000 0.00 0.00 0.00 2.23
324 334 1.262417 TGCGAAGTCCACACCATAGA 58.738 50.000 0.00 0.00 0.00 1.98
325 335 1.621317 TGCGAAGTCCACACCATAGAA 59.379 47.619 0.00 0.00 0.00 2.10
326 336 2.236146 TGCGAAGTCCACACCATAGAAT 59.764 45.455 0.00 0.00 0.00 2.40
327 337 3.270877 GCGAAGTCCACACCATAGAATT 58.729 45.455 0.00 0.00 0.00 2.17
328 338 3.063997 GCGAAGTCCACACCATAGAATTG 59.936 47.826 0.00 0.00 0.00 2.32
329 339 4.253685 CGAAGTCCACACCATAGAATTGT 58.746 43.478 0.00 0.00 0.00 2.71
330 340 4.695455 CGAAGTCCACACCATAGAATTGTT 59.305 41.667 0.00 0.00 0.00 2.83
331 341 5.872617 CGAAGTCCACACCATAGAATTGTTA 59.127 40.000 0.00 0.00 0.00 2.41
332 342 6.036083 CGAAGTCCACACCATAGAATTGTTAG 59.964 42.308 0.00 0.00 0.00 2.34
333 343 6.620877 AGTCCACACCATAGAATTGTTAGA 57.379 37.500 0.00 0.00 0.00 2.10
334 344 7.200434 AGTCCACACCATAGAATTGTTAGAT 57.800 36.000 0.00 0.00 0.00 1.98
335 345 7.275920 AGTCCACACCATAGAATTGTTAGATC 58.724 38.462 0.00 0.00 0.00 2.75
336 346 7.047891 GTCCACACCATAGAATTGTTAGATCA 58.952 38.462 0.00 0.00 0.00 2.92
337 347 7.552687 GTCCACACCATAGAATTGTTAGATCAA 59.447 37.037 0.00 0.00 0.00 2.57
338 348 8.274322 TCCACACCATAGAATTGTTAGATCAAT 58.726 33.333 0.00 0.00 39.35 2.57
339 349 8.347771 CCACACCATAGAATTGTTAGATCAATG 58.652 37.037 0.00 0.00 37.96 2.82
340 350 9.112725 CACACCATAGAATTGTTAGATCAATGA 57.887 33.333 0.00 0.00 37.96 2.57
341 351 9.334947 ACACCATAGAATTGTTAGATCAATGAG 57.665 33.333 0.00 0.00 37.96 2.90
342 352 8.781196 CACCATAGAATTGTTAGATCAATGAGG 58.219 37.037 0.00 0.00 37.96 3.86
343 353 7.941238 ACCATAGAATTGTTAGATCAATGAGGG 59.059 37.037 0.00 0.00 37.96 4.30
344 354 7.094463 CCATAGAATTGTTAGATCAATGAGGGC 60.094 40.741 0.00 0.00 37.96 5.19
345 355 6.011122 AGAATTGTTAGATCAATGAGGGCT 57.989 37.500 0.00 0.00 37.96 5.19
346 356 5.826737 AGAATTGTTAGATCAATGAGGGCTG 59.173 40.000 0.00 0.00 37.96 4.85
347 357 4.574674 TTGTTAGATCAATGAGGGCTGT 57.425 40.909 0.00 0.00 0.00 4.40
348 358 4.574674 TGTTAGATCAATGAGGGCTGTT 57.425 40.909 0.00 0.00 0.00 3.16
349 359 5.692115 TGTTAGATCAATGAGGGCTGTTA 57.308 39.130 0.00 0.00 0.00 2.41
350 360 5.674525 TGTTAGATCAATGAGGGCTGTTAG 58.325 41.667 0.00 0.00 0.00 2.34
351 361 5.425217 TGTTAGATCAATGAGGGCTGTTAGA 59.575 40.000 0.00 0.00 0.00 2.10
352 362 6.100279 TGTTAGATCAATGAGGGCTGTTAGAT 59.900 38.462 0.00 0.00 0.00 1.98
353 363 5.643421 AGATCAATGAGGGCTGTTAGATT 57.357 39.130 0.00 0.00 0.00 2.40
354 364 5.374921 AGATCAATGAGGGCTGTTAGATTG 58.625 41.667 0.00 0.00 0.00 2.67
355 365 4.842531 TCAATGAGGGCTGTTAGATTGA 57.157 40.909 0.00 0.00 0.00 2.57
356 366 4.774124 TCAATGAGGGCTGTTAGATTGAG 58.226 43.478 0.00 0.00 0.00 3.02
357 367 4.471025 TCAATGAGGGCTGTTAGATTGAGA 59.529 41.667 0.00 0.00 0.00 3.27
358 368 5.131642 TCAATGAGGGCTGTTAGATTGAGAT 59.868 40.000 0.00 0.00 0.00 2.75
359 369 5.643421 ATGAGGGCTGTTAGATTGAGATT 57.357 39.130 0.00 0.00 0.00 2.40
360 370 5.441718 TGAGGGCTGTTAGATTGAGATTT 57.558 39.130 0.00 0.00 0.00 2.17
361 371 5.188434 TGAGGGCTGTTAGATTGAGATTTG 58.812 41.667 0.00 0.00 0.00 2.32
362 372 5.184892 AGGGCTGTTAGATTGAGATTTGT 57.815 39.130 0.00 0.00 0.00 2.83
363 373 4.946157 AGGGCTGTTAGATTGAGATTTGTG 59.054 41.667 0.00 0.00 0.00 3.33
364 374 4.096984 GGGCTGTTAGATTGAGATTTGTGG 59.903 45.833 0.00 0.00 0.00 4.17
365 375 4.943705 GGCTGTTAGATTGAGATTTGTGGA 59.056 41.667 0.00 0.00 0.00 4.02
366 376 5.163713 GGCTGTTAGATTGAGATTTGTGGAC 60.164 44.000 0.00 0.00 0.00 4.02
367 377 5.412594 GCTGTTAGATTGAGATTTGTGGACA 59.587 40.000 0.00 0.00 0.00 4.02
368 378 6.072508 GCTGTTAGATTGAGATTTGTGGACAA 60.073 38.462 0.00 0.00 0.00 3.18
378 388 2.045561 TTGTGGACAAATCGTGTGGT 57.954 45.000 0.00 0.00 41.96 4.16
379 389 1.304254 TGTGGACAAATCGTGTGGTG 58.696 50.000 0.00 0.00 41.96 4.17
380 390 0.040425 GTGGACAAATCGTGTGGTGC 60.040 55.000 0.00 0.00 41.96 5.01
381 391 0.179032 TGGACAAATCGTGTGGTGCT 60.179 50.000 0.00 0.00 41.96 4.40
382 392 0.238289 GGACAAATCGTGTGGTGCTG 59.762 55.000 0.00 0.00 41.96 4.41
383 393 1.225855 GACAAATCGTGTGGTGCTGA 58.774 50.000 0.00 0.00 41.96 4.26
384 394 0.944386 ACAAATCGTGTGGTGCTGAC 59.056 50.000 0.00 0.00 39.72 3.51
385 395 1.229428 CAAATCGTGTGGTGCTGACT 58.771 50.000 0.00 0.00 0.00 3.41
386 396 1.069703 CAAATCGTGTGGTGCTGACTG 60.070 52.381 0.00 0.00 0.00 3.51
387 397 0.603707 AATCGTGTGGTGCTGACTGG 60.604 55.000 0.00 0.00 0.00 4.00
388 398 2.454832 ATCGTGTGGTGCTGACTGGG 62.455 60.000 0.00 0.00 0.00 4.45
389 399 2.510906 GTGTGGTGCTGACTGGGT 59.489 61.111 0.00 0.00 0.00 4.51
390 400 1.598130 GTGTGGTGCTGACTGGGTC 60.598 63.158 0.00 0.00 0.00 4.46
391 401 2.357517 GTGGTGCTGACTGGGTCG 60.358 66.667 0.00 0.00 34.95 4.79
392 402 2.842462 TGGTGCTGACTGGGTCGT 60.842 61.111 0.00 0.00 34.95 4.34
393 403 2.357517 GGTGCTGACTGGGTCGTG 60.358 66.667 0.00 0.00 34.95 4.35
394 404 2.357517 GTGCTGACTGGGTCGTGG 60.358 66.667 0.00 0.00 34.95 4.94
395 405 3.625897 TGCTGACTGGGTCGTGGG 61.626 66.667 0.00 0.00 34.95 4.61
396 406 3.311110 GCTGACTGGGTCGTGGGA 61.311 66.667 0.00 0.00 34.95 4.37
397 407 2.657237 CTGACTGGGTCGTGGGAC 59.343 66.667 0.00 0.00 42.66 4.46
398 408 1.908793 CTGACTGGGTCGTGGGACT 60.909 63.158 0.00 0.00 42.97 3.85
399 409 0.611062 CTGACTGGGTCGTGGGACTA 60.611 60.000 0.00 0.00 42.97 2.59
400 410 0.178955 TGACTGGGTCGTGGGACTAA 60.179 55.000 0.00 0.00 42.97 2.24
401 411 1.192428 GACTGGGTCGTGGGACTAAT 58.808 55.000 0.00 0.00 42.97 1.73
402 412 1.553704 GACTGGGTCGTGGGACTAATT 59.446 52.381 0.00 0.00 42.97 1.40
403 413 1.278127 ACTGGGTCGTGGGACTAATTG 59.722 52.381 0.00 0.00 42.97 2.32
404 414 0.035820 TGGGTCGTGGGACTAATTGC 60.036 55.000 0.00 0.00 42.97 3.56
405 415 1.087771 GGGTCGTGGGACTAATTGCG 61.088 60.000 0.00 0.00 42.97 4.85
406 416 1.087771 GGTCGTGGGACTAATTGCGG 61.088 60.000 0.00 0.00 42.97 5.69
407 417 1.087771 GTCGTGGGACTAATTGCGGG 61.088 60.000 0.00 0.00 40.15 6.13
408 418 1.817941 CGTGGGACTAATTGCGGGG 60.818 63.158 0.00 0.00 0.00 5.73
409 419 1.301954 GTGGGACTAATTGCGGGGT 59.698 57.895 0.00 0.00 0.00 4.95
410 420 1.029947 GTGGGACTAATTGCGGGGTG 61.030 60.000 0.00 0.00 0.00 4.61
411 421 2.119029 GGGACTAATTGCGGGGTGC 61.119 63.158 0.00 0.00 46.70 5.01
420 430 2.357760 GCGGGGTGCACGTAAGAA 60.358 61.111 11.45 0.00 45.45 2.52
421 431 1.962306 GCGGGGTGCACGTAAGAAA 60.962 57.895 11.45 0.00 45.45 2.52
422 432 1.908066 GCGGGGTGCACGTAAGAAAG 61.908 60.000 11.45 0.00 45.45 2.62
423 433 0.601841 CGGGGTGCACGTAAGAAAGT 60.602 55.000 11.45 0.00 43.62 2.66
424 434 1.601166 GGGGTGCACGTAAGAAAGTT 58.399 50.000 11.45 0.00 43.62 2.66
425 435 1.534163 GGGGTGCACGTAAGAAAGTTC 59.466 52.381 11.45 0.00 43.62 3.01
426 436 2.215196 GGGTGCACGTAAGAAAGTTCA 58.785 47.619 11.45 0.00 43.62 3.18
427 437 2.812011 GGGTGCACGTAAGAAAGTTCAT 59.188 45.455 11.45 0.00 43.62 2.57
428 438 3.364964 GGGTGCACGTAAGAAAGTTCATG 60.365 47.826 11.45 0.00 43.62 3.07
429 439 3.250040 GGTGCACGTAAGAAAGTTCATGT 59.750 43.478 11.45 0.00 43.62 3.21
430 440 4.261031 GGTGCACGTAAGAAAGTTCATGTT 60.261 41.667 11.45 0.00 43.62 2.71
431 441 5.270853 GTGCACGTAAGAAAGTTCATGTTT 58.729 37.500 0.00 0.00 43.62 2.83
432 442 6.423862 GTGCACGTAAGAAAGTTCATGTTTA 58.576 36.000 0.00 0.00 43.62 2.01
433 443 6.908284 GTGCACGTAAGAAAGTTCATGTTTAA 59.092 34.615 0.00 0.00 43.62 1.52
434 444 7.589954 GTGCACGTAAGAAAGTTCATGTTTAAT 59.410 33.333 0.00 0.00 43.62 1.40
435 445 8.775527 TGCACGTAAGAAAGTTCATGTTTAATA 58.224 29.630 0.00 0.00 43.62 0.98
436 446 9.262472 GCACGTAAGAAAGTTCATGTTTAATAG 57.738 33.333 0.00 0.00 43.62 1.73
437 447 9.755064 CACGTAAGAAAGTTCATGTTTAATAGG 57.245 33.333 0.00 0.00 43.62 2.57
438 448 9.715121 ACGTAAGAAAGTTCATGTTTAATAGGA 57.285 29.630 0.00 0.00 43.62 2.94
490 500 7.744733 TCTATAATCAACAATGCCCATGTCTA 58.255 34.615 0.00 0.00 0.00 2.59
522 533 8.800332 AGAGATGCTCATTTTACAAGTCAAAAT 58.200 29.630 0.00 0.00 36.31 1.82
530 541 9.898152 TCATTTTACAAGTCAAAATTTTCCCTT 57.102 25.926 0.00 3.36 34.22 3.95
549 560 4.021104 CCCTTATCGACATCAATAGCTCCA 60.021 45.833 0.00 0.00 0.00 3.86
564 575 4.590850 AGCTCCAACTTTGTTCATTTCC 57.409 40.909 0.00 0.00 0.00 3.13
571 582 5.006941 CCAACTTTGTTCATTTCCTTGCTTG 59.993 40.000 0.00 0.00 0.00 4.01
613 624 4.878397 CAGTTTGGACTCTGGACAATATCC 59.122 45.833 0.00 0.00 40.33 2.59
681 692 4.063689 TCGCTTTTTCGGTATACAAACCA 58.936 39.130 5.01 0.00 39.71 3.67
684 695 4.561213 GCTTTTTCGGTATACAAACCATGC 59.439 41.667 5.01 0.00 39.71 4.06
685 696 5.704888 CTTTTTCGGTATACAAACCATGCA 58.295 37.500 5.01 0.00 39.71 3.96
707 725 2.168728 GAGAAGACTACGGGGAAGCAAT 59.831 50.000 0.00 0.00 0.00 3.56
734 752 7.063780 CCAAATTTGCAAGATTCCTATGACAAC 59.936 37.037 12.92 0.00 0.00 3.32
740 758 5.491070 CAAGATTCCTATGACAACACCTCA 58.509 41.667 0.00 0.00 0.00 3.86
743 761 6.725364 AGATTCCTATGACAACACCTCAAAT 58.275 36.000 0.00 0.00 0.00 2.32
748 766 5.939883 CCTATGACAACACCTCAAATCTCAA 59.060 40.000 0.00 0.00 0.00 3.02
750 768 5.947228 TGACAACACCTCAAATCTCAATC 57.053 39.130 0.00 0.00 0.00 2.67
755 773 5.089970 ACACCTCAAATCTCAATCGATCA 57.910 39.130 0.00 0.00 0.00 2.92
756 774 5.491070 ACACCTCAAATCTCAATCGATCAA 58.509 37.500 0.00 0.00 0.00 2.57
757 775 6.118170 ACACCTCAAATCTCAATCGATCAAT 58.882 36.000 0.00 0.00 0.00 2.57
758 776 6.600822 ACACCTCAAATCTCAATCGATCAATT 59.399 34.615 0.00 0.00 0.00 2.32
759 777 7.130917 CACCTCAAATCTCAATCGATCAATTC 58.869 38.462 0.00 0.00 0.00 2.17
760 778 6.261826 ACCTCAAATCTCAATCGATCAATTCC 59.738 38.462 0.00 0.00 0.00 3.01
762 780 7.013083 CCTCAAATCTCAATCGATCAATTCCTT 59.987 37.037 0.00 0.00 0.00 3.36
764 782 8.186163 TCAAATCTCAATCGATCAATTCCTTTG 58.814 33.333 0.00 4.27 36.61 2.77
766 784 6.426980 TCTCAATCGATCAATTCCTTTGTG 57.573 37.500 0.00 0.00 36.65 3.33
769 787 6.611381 TCAATCGATCAATTCCTTTGTGTTC 58.389 36.000 0.00 0.00 36.65 3.18
770 788 6.430925 TCAATCGATCAATTCCTTTGTGTTCT 59.569 34.615 0.00 0.00 36.65 3.01
775 793 6.917477 CGATCAATTCCTTTGTGTTCTTCAAA 59.083 34.615 0.00 0.00 36.65 2.69
776 794 7.596248 CGATCAATTCCTTTGTGTTCTTCAAAT 59.404 33.333 0.00 0.00 36.65 2.32
781 799 9.617523 AATTCCTTTGTGTTCTTCAAATGATTT 57.382 25.926 0.00 0.00 34.88 2.17
828 846 6.688073 ATATACAGTATGGAACTCAAGGGG 57.312 41.667 3.03 0.00 43.62 4.79
829 847 1.282157 ACAGTATGGAACTCAAGGGGC 59.718 52.381 0.00 0.00 43.62 5.80
830 848 1.281867 CAGTATGGAACTCAAGGGGCA 59.718 52.381 0.00 0.00 35.76 5.36
831 849 1.282157 AGTATGGAACTCAAGGGGCAC 59.718 52.381 0.00 0.00 30.33 5.01
832 850 1.282157 GTATGGAACTCAAGGGGCACT 59.718 52.381 0.00 0.00 0.00 4.40
833 851 0.779997 ATGGAACTCAAGGGGCACTT 59.220 50.000 0.00 0.00 41.00 3.16
834 852 0.555769 TGGAACTCAAGGGGCACTTT 59.444 50.000 0.00 0.00 37.29 2.66
835 853 0.961753 GGAACTCAAGGGGCACTTTG 59.038 55.000 4.04 4.04 37.29 2.77
836 854 1.478654 GGAACTCAAGGGGCACTTTGA 60.479 52.381 13.44 13.44 37.29 2.69
837 855 2.519013 GAACTCAAGGGGCACTTTGAT 58.481 47.619 14.54 0.00 37.29 2.57
838 856 3.561313 GGAACTCAAGGGGCACTTTGATA 60.561 47.826 14.54 0.00 37.29 2.15
839 857 4.273318 GAACTCAAGGGGCACTTTGATAT 58.727 43.478 14.54 6.09 37.29 1.63
882 900 2.875080 ATTGACAAACTAACGCGCTC 57.125 45.000 5.73 0.00 0.00 5.03
886 904 0.782384 ACAAACTAACGCGCTCTTCG 59.218 50.000 5.73 0.00 42.12 3.79
927 945 3.262405 AGGTAGACGTATTTTCTGGGCAA 59.738 43.478 0.00 0.00 0.00 4.52
961 979 2.679287 GTCCTCCCCCTTCGTCGT 60.679 66.667 0.00 0.00 0.00 4.34
977 995 2.743938 GTCGTGAGCTCAAGTCTGAAA 58.256 47.619 25.73 6.01 0.00 2.69
1015 1033 2.023461 CTCGACACGCTAGCCGAG 59.977 66.667 21.26 21.26 41.71 4.63
1263 1300 2.747686 GGGGCGGTTGAGTTCAGA 59.252 61.111 0.00 0.00 0.00 3.27
1420 1457 2.568956 CTCAAGATCTGGTTCCAGGTCA 59.431 50.000 27.24 11.27 44.27 4.02
1427 1464 1.002087 CTGGTTCCAGGTCAGTACACC 59.998 57.143 10.71 0.00 36.58 4.16
1428 1465 1.053424 GGTTCCAGGTCAGTACACCA 58.947 55.000 5.26 0.00 39.16 4.17
1431 1468 2.567615 GTTCCAGGTCAGTACACCATCT 59.432 50.000 5.26 0.00 39.16 2.90
1432 1469 2.179427 TCCAGGTCAGTACACCATCTG 58.821 52.381 5.26 0.00 39.16 2.90
1433 1470 1.208052 CCAGGTCAGTACACCATCTGG 59.792 57.143 5.26 4.70 39.16 3.86
1584 1621 4.382685 CCGTGTGTGACAAGGTATATTCCT 60.383 45.833 0.00 0.00 41.83 3.36
1632 1670 2.566833 TTGAATAGCCAGTGTGCAGT 57.433 45.000 6.40 0.00 0.00 4.40
1651 1689 7.147897 TGTGCAGTATATGTAAACTAGCTCTGT 60.148 37.037 0.00 0.00 0.00 3.41
1759 1799 3.119602 CCATGTGGTGAGCTTCATTTCAG 60.120 47.826 0.00 0.00 0.00 3.02
1773 1813 2.774439 TTTCAGACTTTTTGCGCCTC 57.226 45.000 4.18 0.00 0.00 4.70
1795 1837 3.169512 TCCTCGCAGACATCCCATATA 57.830 47.619 0.00 0.00 0.00 0.86
1805 1847 5.121298 CAGACATCCCATATATTGTTCTGCG 59.879 44.000 0.00 0.00 0.00 5.18
1925 1969 8.739972 ACACAAGAATAAAGTTTGGTATGGATC 58.260 33.333 0.00 0.00 0.00 3.36
1926 1970 8.190784 CACAAGAATAAAGTTTGGTATGGATCC 58.809 37.037 4.20 4.20 0.00 3.36
1983 2033 9.906660 GGTATAATTTTTGAACTGTGTTCATGA 57.093 29.630 12.95 0.00 0.00 3.07
2061 2112 8.773033 ATTTGGGATTTGATTACATAGCTTCT 57.227 30.769 0.00 0.00 0.00 2.85
2118 2169 1.344953 ATGCTGAAGGGCCATCGGTA 61.345 55.000 18.17 14.65 0.00 4.02
2148 2199 3.587797 TCGAAAGACGAGGTGCTTTAT 57.412 42.857 0.00 0.00 46.45 1.40
2186 2237 5.175126 GCTTCAATGCTATTGAATGTGATGC 59.825 40.000 18.37 14.69 37.72 3.91
2207 2258 3.198853 GCCAATTGAGTTCTACTCCCTCT 59.801 47.826 7.12 0.00 44.44 3.69
2210 2261 5.894393 CCAATTGAGTTCTACTCCCTCTCTA 59.106 44.000 7.12 0.00 44.44 2.43
2211 2262 6.381420 CCAATTGAGTTCTACTCCCTCTCTAA 59.619 42.308 7.12 0.00 44.44 2.10
2212 2263 7.093289 CCAATTGAGTTCTACTCCCTCTCTAAA 60.093 40.741 7.12 0.00 44.44 1.85
2213 2264 7.654022 ATTGAGTTCTACTCCCTCTCTAAAG 57.346 40.000 4.52 0.00 44.44 1.85
2214 2265 6.390048 TGAGTTCTACTCCCTCTCTAAAGA 57.610 41.667 4.52 0.00 44.44 2.52
2217 2268 7.896496 TGAGTTCTACTCCCTCTCTAAAGAAAT 59.104 37.037 4.52 0.00 44.44 2.17
2256 2307 8.218256 GATAACTAAAGTAGTGATCTAAGCGC 57.782 38.462 0.00 0.00 41.55 5.92
2257 2308 5.838531 ACTAAAGTAGTGATCTAAGCGCT 57.161 39.130 2.64 2.64 37.69 5.92
2258 2309 5.823353 ACTAAAGTAGTGATCTAAGCGCTC 58.177 41.667 12.06 0.00 37.69 5.03
2259 2310 4.993029 AAAGTAGTGATCTAAGCGCTCT 57.007 40.909 12.06 3.67 0.00 4.09
2260 2311 4.993029 AAGTAGTGATCTAAGCGCTCTT 57.007 40.909 12.06 2.09 36.35 2.85
2262 2313 6.642707 AAGTAGTGATCTAAGCGCTCTTAT 57.357 37.500 12.06 3.87 34.54 1.73
2264 2315 7.931578 AGTAGTGATCTAAGCGCTCTTATAT 57.068 36.000 12.06 0.00 34.54 0.86
2267 2318 9.068008 GTAGTGATCTAAGCGCTCTTATATTTC 57.932 37.037 12.06 0.76 34.54 2.17
2268 2319 7.891561 AGTGATCTAAGCGCTCTTATATTTCT 58.108 34.615 12.06 0.00 34.54 2.52
2269 2320 8.364142 AGTGATCTAAGCGCTCTTATATTTCTT 58.636 33.333 12.06 0.00 34.54 2.52
2270 2321 8.983724 GTGATCTAAGCGCTCTTATATTTCTTT 58.016 33.333 12.06 0.00 34.54 2.52
2300 2364 6.962902 AGGGAGTATTATTCATCCTAGAAGGG 59.037 42.308 0.00 0.00 35.59 3.95
2302 2366 7.093245 GGGAGTATTATTCATCCTAGAAGGGAC 60.093 44.444 0.00 0.00 38.30 4.46
2308 2372 3.972133 TCATCCTAGAAGGGACGTTGTA 58.028 45.455 0.00 0.00 38.30 2.41
2309 2373 3.698040 TCATCCTAGAAGGGACGTTGTAC 59.302 47.826 0.00 0.00 38.30 2.90
2321 2386 3.000925 GGACGTTGTACACAGTGAAACAG 59.999 47.826 7.81 7.81 41.43 3.16
2324 2389 4.506654 ACGTTGTACACAGTGAAACAGATC 59.493 41.667 7.81 5.45 41.43 2.75
2370 2439 9.758651 ATATTGTTTAGTTGAAACCACCTTTTC 57.241 29.630 0.00 0.00 45.94 2.29
2371 2440 6.844097 TGTTTAGTTGAAACCACCTTTTCT 57.156 33.333 0.00 0.00 45.94 2.52
2372 2441 6.626302 TGTTTAGTTGAAACCACCTTTTCTG 58.374 36.000 0.00 0.00 45.94 3.02
2373 2442 5.845391 TTAGTTGAAACCACCTTTTCTGG 57.155 39.130 0.00 0.00 36.58 3.86
2534 2680 2.158957 TCAGGATCTGGCGGTGTATTTC 60.159 50.000 0.00 0.00 31.51 2.17
2718 2869 4.273724 GGTTCTGTTCTTTCTCCTTGTGTC 59.726 45.833 0.00 0.00 0.00 3.67
2796 2947 9.958180 TTGTTCAAAGACATATAGGAGAAATGA 57.042 29.630 0.00 0.00 0.00 2.57
2873 3024 6.149807 GGTTTTGGTTCTATACGATTGGTCAA 59.850 38.462 0.00 0.00 0.00 3.18
3281 3435 6.702723 GGCAGCATAGCATATTTGAATTGAAA 59.297 34.615 0.00 0.00 35.83 2.69
3343 3579 8.201464 ACAAAATATATGTACATGTCGTCCTCA 58.799 33.333 18.81 0.00 0.00 3.86
3379 3615 9.660180 AAATGGTGTTTGTTACAAAATACTTGT 57.340 25.926 12.37 3.54 38.80 3.16
3392 3628 8.644318 ACAAAATACTTGTATATGTCGTCCTC 57.356 34.615 6.41 0.00 0.00 3.71
3393 3629 8.255206 ACAAAATACTTGTATATGTCGTCCTCA 58.745 33.333 6.41 0.00 0.00 3.86
3394 3630 9.261180 CAAAATACTTGTATATGTCGTCCTCAT 57.739 33.333 0.00 0.00 0.00 2.90
3398 3634 6.982852 ACTTGTATATGTCGTCCTCATAAGG 58.017 40.000 0.00 0.00 44.89 2.69
3449 3685 1.552792 CAAACACACAACCCCCAAAGT 59.447 47.619 0.00 0.00 0.00 2.66
3541 3777 1.203313 AGGTGCTGGGTTAGGAGAGAA 60.203 52.381 0.00 0.00 0.00 2.87
3548 3784 2.500098 TGGGTTAGGAGAGAATGGTTCG 59.500 50.000 0.00 0.00 34.02 3.95
3667 3958 1.271054 ACTCACTGTTGCCTGATCCAC 60.271 52.381 0.00 0.00 0.00 4.02
3685 3976 7.595604 TGATCCACCTCCGTTTTAATTTTTAC 58.404 34.615 0.00 0.00 0.00 2.01
3691 3982 8.344098 CACCTCCGTTTTAATTTTTACACACTA 58.656 33.333 0.00 0.00 0.00 2.74
3813 6519 2.213499 CGGCATAGTCCTGATTTCCAC 58.787 52.381 0.00 0.00 0.00 4.02
3957 6663 1.496429 CTGGGGTCAGGCATAATCCTT 59.504 52.381 0.00 0.00 37.36 3.36
4056 6762 2.800250 GGGAAGCCCATAAGGATCATG 58.200 52.381 0.00 0.00 44.65 3.07
4057 6763 2.376518 GGGAAGCCCATAAGGATCATGA 59.623 50.000 0.00 0.00 44.65 3.07
4058 6764 3.181429 GGGAAGCCCATAAGGATCATGAA 60.181 47.826 0.00 0.00 44.65 2.57
4059 6765 3.823304 GGAAGCCCATAAGGATCATGAAC 59.177 47.826 0.00 0.00 38.24 3.18
4060 6766 3.515602 AGCCCATAAGGATCATGAACC 57.484 47.619 13.96 13.96 38.24 3.62
4061 6767 3.059097 AGCCCATAAGGATCATGAACCT 58.941 45.455 18.33 18.33 38.24 3.50
4062 6768 3.152341 GCCCATAAGGATCATGAACCTG 58.848 50.000 23.89 12.99 38.24 4.00
4063 6769 3.759581 CCCATAAGGATCATGAACCTGG 58.240 50.000 23.89 20.16 38.24 4.45
4064 6770 3.395607 CCCATAAGGATCATGAACCTGGA 59.604 47.826 23.89 15.65 38.24 3.86
4066 6772 2.725221 AAGGATCATGAACCTGGAGC 57.275 50.000 23.89 0.00 36.56 4.70
4067 6773 1.588239 AGGATCATGAACCTGGAGCA 58.412 50.000 22.72 0.00 34.99 4.26
4068 6774 2.133520 AGGATCATGAACCTGGAGCAT 58.866 47.619 22.72 0.00 34.99 3.79
4069 6775 2.106166 AGGATCATGAACCTGGAGCATC 59.894 50.000 22.72 0.44 34.99 3.91
4071 6777 3.434739 GGATCATGAACCTGGAGCATCTT 60.435 47.826 14.49 0.00 33.73 2.40
4072 6778 2.995283 TCATGAACCTGGAGCATCTTG 58.005 47.619 0.00 2.45 33.73 3.02
4075 6781 1.699083 TGAACCTGGAGCATCTTGTGA 59.301 47.619 0.00 0.00 33.73 3.58
4076 6782 2.106338 TGAACCTGGAGCATCTTGTGAA 59.894 45.455 0.00 0.00 33.73 3.18
4077 6783 2.486472 ACCTGGAGCATCTTGTGAAG 57.514 50.000 0.00 0.00 33.73 3.02
4078 6784 1.093159 CCTGGAGCATCTTGTGAAGC 58.907 55.000 0.00 0.00 37.19 3.86
4080 6786 0.401356 TGGAGCATCTTGTGAAGCCA 59.599 50.000 0.00 0.00 37.60 4.75
4081 6787 1.093159 GGAGCATCTTGTGAAGCCAG 58.907 55.000 0.00 0.00 37.60 4.85
4084 6790 0.450983 GCATCTTGTGAAGCCAGAGC 59.549 55.000 0.00 0.00 40.32 4.09
4085 6791 1.093159 CATCTTGTGAAGCCAGAGCC 58.907 55.000 0.00 0.00 41.25 4.70
4086 6792 0.392193 ATCTTGTGAAGCCAGAGCCG 60.392 55.000 0.00 0.00 41.25 5.52
4087 6793 2.032528 TTGTGAAGCCAGAGCCGG 59.967 61.111 0.00 0.00 41.25 6.13
4088 6794 2.454832 CTTGTGAAGCCAGAGCCGGA 62.455 60.000 5.05 0.00 41.25 5.14
4090 6796 4.087892 TGAAGCCAGAGCCGGAGC 62.088 66.667 5.05 0.00 41.25 4.70
4091 6797 4.847444 GAAGCCAGAGCCGGAGCC 62.847 72.222 5.05 0.00 41.25 4.70
4101 6807 4.785453 CCGGAGCCTGCCAAGGTC 62.785 72.222 0.00 0.00 46.43 3.85
4105 6811 3.909086 GAGCCTGCCAAGGTCGCTT 62.909 63.158 0.00 0.00 46.43 4.68
4106 6812 3.741476 GCCTGCCAAGGTCGCTTG 61.741 66.667 0.00 0.00 46.43 4.01
4107 6813 2.032528 CCTGCCAAGGTCGCTTGA 59.967 61.111 4.55 0.00 38.96 3.02
4108 6814 2.328099 CCTGCCAAGGTCGCTTGAC 61.328 63.158 4.55 0.00 42.11 3.18
4110 6816 1.572085 CTGCCAAGGTCGCTTGACAG 61.572 60.000 5.09 5.09 44.74 3.51
4112 6818 1.569479 GCCAAGGTCGCTTGACAGAC 61.569 60.000 4.55 0.00 44.74 3.51
4114 6820 1.609061 CCAAGGTCGCTTGACAGACAT 60.609 52.381 4.55 0.00 44.74 3.06
4115 6821 1.728971 CAAGGTCGCTTGACAGACATC 59.271 52.381 0.00 0.00 44.74 3.06
4116 6822 0.969149 AGGTCGCTTGACAGACATCA 59.031 50.000 0.00 0.00 44.74 3.07
4118 6824 1.071605 GTCGCTTGACAGACATCACC 58.928 55.000 0.00 0.00 42.41 4.02
4119 6825 0.678950 TCGCTTGACAGACATCACCA 59.321 50.000 0.00 0.00 0.00 4.17
4120 6826 1.073964 CGCTTGACAGACATCACCAG 58.926 55.000 0.00 0.00 0.00 4.00
4121 6827 0.801251 GCTTGACAGACATCACCAGC 59.199 55.000 0.00 0.00 0.00 4.85
4122 6828 1.610102 GCTTGACAGACATCACCAGCT 60.610 52.381 0.00 0.00 32.14 4.24
4123 6829 2.775890 CTTGACAGACATCACCAGCTT 58.224 47.619 0.00 0.00 0.00 3.74
4124 6830 2.462456 TGACAGACATCACCAGCTTC 57.538 50.000 0.00 0.00 0.00 3.86
4127 6833 2.740981 GACAGACATCACCAGCTTCTTG 59.259 50.000 0.00 0.00 0.00 3.02
4129 6835 3.324846 ACAGACATCACCAGCTTCTTGTA 59.675 43.478 0.00 0.00 0.00 2.41
4130 6836 3.931468 CAGACATCACCAGCTTCTTGTAG 59.069 47.826 0.00 0.00 0.00 2.74
4133 6839 1.352083 TCACCAGCTTCTTGTAGCCT 58.648 50.000 0.00 0.00 42.20 4.58
4135 6841 2.079925 CACCAGCTTCTTGTAGCCTTC 58.920 52.381 0.00 0.00 42.20 3.46
4139 6845 3.307339 CCAGCTTCTTGTAGCCTTCTCTT 60.307 47.826 0.00 0.00 42.20 2.85
4140 6846 3.683822 CAGCTTCTTGTAGCCTTCTCTTG 59.316 47.826 0.00 0.00 42.20 3.02
4141 6847 3.580458 AGCTTCTTGTAGCCTTCTCTTGA 59.420 43.478 0.00 0.00 42.20 3.02
4144 6850 5.336849 GCTTCTTGTAGCCTTCTCTTGACTA 60.337 44.000 0.00 0.00 35.06 2.59
4145 6851 5.646577 TCTTGTAGCCTTCTCTTGACTAC 57.353 43.478 0.00 0.00 35.00 2.73
4146 6852 5.326069 TCTTGTAGCCTTCTCTTGACTACT 58.674 41.667 0.00 0.00 35.38 2.57
4147 6853 5.775701 TCTTGTAGCCTTCTCTTGACTACTT 59.224 40.000 0.00 0.00 35.38 2.24
4149 6855 7.450634 TCTTGTAGCCTTCTCTTGACTACTTTA 59.549 37.037 0.00 0.00 35.38 1.85
4150 6856 6.921914 TGTAGCCTTCTCTTGACTACTTTAC 58.078 40.000 0.00 0.00 35.38 2.01
4151 6857 5.061920 AGCCTTCTCTTGACTACTTTACG 57.938 43.478 0.00 0.00 0.00 3.18
4153 6859 4.858140 GCCTTCTCTTGACTACTTTACGTC 59.142 45.833 0.00 0.00 0.00 4.34
4154 6860 5.335819 GCCTTCTCTTGACTACTTTACGTCT 60.336 44.000 0.00 0.00 0.00 4.18
4155 6861 6.087522 CCTTCTCTTGACTACTTTACGTCTG 58.912 44.000 0.00 0.00 0.00 3.51
4156 6862 6.294065 CCTTCTCTTGACTACTTTACGTCTGT 60.294 42.308 0.00 0.00 0.00 3.41
4157 6863 5.998553 TCTCTTGACTACTTTACGTCTGTG 58.001 41.667 0.00 0.00 0.00 3.66
4159 6865 6.430308 TCTCTTGACTACTTTACGTCTGTGAT 59.570 38.462 0.00 0.00 0.00 3.06
4160 6866 6.609533 TCTTGACTACTTTACGTCTGTGATC 58.390 40.000 0.00 0.00 0.00 2.92
4163 6869 6.322491 TGACTACTTTACGTCTGTGATCATG 58.678 40.000 0.00 0.00 0.00 3.07
4164 6870 6.072119 TGACTACTTTACGTCTGTGATCATGT 60.072 38.462 0.00 0.00 0.00 3.21
4165 6871 6.093404 ACTACTTTACGTCTGTGATCATGTG 58.907 40.000 0.00 0.00 0.00 3.21
4166 6872 5.134202 ACTTTACGTCTGTGATCATGTGA 57.866 39.130 0.00 0.00 0.00 3.58
4167 6873 5.538118 ACTTTACGTCTGTGATCATGTGAA 58.462 37.500 0.00 0.00 0.00 3.18
4170 6876 4.462508 ACGTCTGTGATCATGTGAAGAT 57.537 40.909 0.00 0.00 0.00 2.40
4171 6877 5.582689 ACGTCTGTGATCATGTGAAGATA 57.417 39.130 0.00 0.00 0.00 1.98
4172 6878 6.154203 ACGTCTGTGATCATGTGAAGATAT 57.846 37.500 0.00 0.00 0.00 1.63
4173 6879 7.277174 ACGTCTGTGATCATGTGAAGATATA 57.723 36.000 0.00 0.00 0.00 0.86
4174 6880 7.142021 ACGTCTGTGATCATGTGAAGATATAC 58.858 38.462 0.00 0.00 0.00 1.47
4175 6881 7.141363 CGTCTGTGATCATGTGAAGATATACA 58.859 38.462 0.00 0.00 0.00 2.29
4176 6882 7.114106 CGTCTGTGATCATGTGAAGATATACAC 59.886 40.741 0.00 0.00 37.51 2.90
4178 6884 8.139989 TCTGTGATCATGTGAAGATATACACTG 58.860 37.037 0.00 0.00 37.81 3.66
4180 6886 7.922811 TGTGATCATGTGAAGATATACACTGAC 59.077 37.037 0.00 0.00 37.81 3.51
4181 6887 7.922811 GTGATCATGTGAAGATATACACTGACA 59.077 37.037 0.00 0.00 37.81 3.58
4182 6888 8.139989 TGATCATGTGAAGATATACACTGACAG 58.860 37.037 0.00 0.00 37.81 3.51
4184 6890 7.840931 TCATGTGAAGATATACACTGACAGTT 58.159 34.615 5.04 0.58 37.81 3.16
4185 6891 8.314021 TCATGTGAAGATATACACTGACAGTTT 58.686 33.333 5.04 1.81 37.81 2.66
4186 6892 7.889589 TGTGAAGATATACACTGACAGTTTG 57.110 36.000 5.04 0.00 37.81 2.93
4189 6895 8.988934 GTGAAGATATACACTGACAGTTTGAAA 58.011 33.333 5.04 0.00 34.65 2.69
4192 6898 9.561069 AAGATATACACTGACAGTTTGAAAGTT 57.439 29.630 5.04 0.00 0.00 2.66
4193 6899 8.993121 AGATATACACTGACAGTTTGAAAGTTG 58.007 33.333 5.04 0.00 0.00 3.16
4195 6901 3.119495 ACACTGACAGTTTGAAAGTTGGC 60.119 43.478 5.04 0.00 0.00 4.52
4197 6903 3.119495 ACTGACAGTTTGAAAGTTGGCAC 60.119 43.478 1.07 0.00 0.00 5.01
4198 6904 2.159448 TGACAGTTTGAAAGTTGGCACG 60.159 45.455 0.00 0.00 0.00 5.34
4199 6905 1.199624 CAGTTTGAAAGTTGGCACGC 58.800 50.000 0.00 0.00 0.00 5.34
4200 6906 0.102300 AGTTTGAAAGTTGGCACGCC 59.898 50.000 0.00 0.00 0.00 5.68
4202 6908 1.040339 TTTGAAAGTTGGCACGCCCT 61.040 50.000 5.42 0.00 34.56 5.19
4203 6909 0.179015 TTGAAAGTTGGCACGCCCTA 60.179 50.000 5.42 0.00 34.56 3.53
4204 6910 0.887387 TGAAAGTTGGCACGCCCTAC 60.887 55.000 5.42 4.00 39.31 3.18
4205 6911 0.887387 GAAAGTTGGCACGCCCTACA 60.887 55.000 5.42 0.00 41.16 2.74
4206 6912 0.466555 AAAGTTGGCACGCCCTACAA 60.467 50.000 5.42 0.00 41.16 2.41
4207 6913 0.466555 AAGTTGGCACGCCCTACAAA 60.467 50.000 5.42 0.00 41.16 2.83
4213 6919 0.456653 GCACGCCCTACAAATGCAAG 60.457 55.000 0.00 0.00 36.30 4.01
4214 6920 1.164411 CACGCCCTACAAATGCAAGA 58.836 50.000 0.00 0.00 0.00 3.02
4215 6921 1.539388 CACGCCCTACAAATGCAAGAA 59.461 47.619 0.00 0.00 0.00 2.52
4216 6922 2.164219 CACGCCCTACAAATGCAAGAAT 59.836 45.455 0.00 0.00 0.00 2.40
4217 6923 2.423538 ACGCCCTACAAATGCAAGAATC 59.576 45.455 0.00 0.00 0.00 2.52
4218 6924 2.539547 CGCCCTACAAATGCAAGAATCG 60.540 50.000 0.00 0.00 0.00 3.34
4221 6927 2.358898 CCTACAAATGCAAGAATCGGGG 59.641 50.000 0.00 0.00 0.00 5.73
4222 6928 2.214376 ACAAATGCAAGAATCGGGGA 57.786 45.000 0.00 0.00 0.00 4.81
4223 6929 2.524306 ACAAATGCAAGAATCGGGGAA 58.476 42.857 0.00 0.00 0.00 3.97
4225 6931 2.493278 CAAATGCAAGAATCGGGGAAGT 59.507 45.455 0.00 0.00 0.00 3.01
4227 6933 1.821216 TGCAAGAATCGGGGAAGTTC 58.179 50.000 0.00 0.00 0.00 3.01
4228 6934 1.095600 GCAAGAATCGGGGAAGTTCC 58.904 55.000 13.99 13.99 35.23 3.62
4231 6937 1.952621 AGAATCGGGGAAGTTCCAGA 58.047 50.000 23.33 20.33 38.64 3.86
4232 6938 2.266279 AGAATCGGGGAAGTTCCAGAA 58.734 47.619 23.33 7.93 38.64 3.02
4233 6939 2.642807 AGAATCGGGGAAGTTCCAGAAA 59.357 45.455 23.33 6.15 38.64 2.52
4236 6942 1.491332 TCGGGGAAGTTCCAGAAACAA 59.509 47.619 23.33 0.00 40.56 2.83
4237 6943 2.107552 TCGGGGAAGTTCCAGAAACAAT 59.892 45.455 23.33 0.00 40.56 2.71
4238 6944 2.488153 CGGGGAAGTTCCAGAAACAATC 59.512 50.000 23.33 2.53 40.56 2.67
4240 6946 4.089361 GGGGAAGTTCCAGAAACAATCAT 58.911 43.478 23.33 0.00 40.56 2.45
4242 6948 4.142600 GGGAAGTTCCAGAAACAATCATCG 60.143 45.833 23.33 0.00 40.56 3.84
4244 6950 5.642063 GGAAGTTCCAGAAACAATCATCGTA 59.358 40.000 17.44 0.00 40.56 3.43
4255 6961 3.809832 ACAATCATCGTAGTTATGCTGCC 59.190 43.478 0.00 0.00 0.00 4.85
4276 6982 0.178998 CAATCAGGGGCTCCATCCAG 60.179 60.000 4.79 0.00 34.83 3.86
4296 7002 2.024369 AGGTGGTTCTTGAAAAGGTGGT 60.024 45.455 0.00 0.00 46.24 4.16
4319 7025 0.777631 CATTGGCGACTTTGCGTTTG 59.222 50.000 0.00 0.00 35.06 2.93
4415 7702 1.555075 TGACCTGGCCTGACATAGTTC 59.445 52.381 11.88 0.00 0.00 3.01
4489 7777 3.997021 CTCTTGAGCCAAAATGTCTACGT 59.003 43.478 0.00 0.00 0.00 3.57
4490 7778 5.142061 TCTTGAGCCAAAATGTCTACGTA 57.858 39.130 0.00 0.00 0.00 3.57
4491 7779 4.927425 TCTTGAGCCAAAATGTCTACGTAC 59.073 41.667 0.00 0.00 0.00 3.67
4523 7811 7.636150 TTATTAAGAGTTAGTCAGCGGTACT 57.364 36.000 0.00 0.00 0.00 2.73
4530 7818 1.835494 AGTCAGCGGTACTGCTTCTA 58.165 50.000 26.74 12.33 44.46 2.10
4531 7819 2.168496 AGTCAGCGGTACTGCTTCTAA 58.832 47.619 26.74 9.82 44.46 2.10
4533 7821 2.094649 GTCAGCGGTACTGCTTCTAACT 60.095 50.000 26.74 1.00 44.46 2.24
4536 7824 2.761208 AGCGGTACTGCTTCTAACTGAT 59.239 45.455 23.79 0.00 44.46 2.90
4584 7950 3.687698 AGTTATGATACGGCAACACCAAC 59.312 43.478 0.00 0.00 39.03 3.77
4643 8014 7.031226 CAGGATGGTTTATCACGAAATCATT 57.969 36.000 0.00 0.00 39.66 2.57
4743 8276 2.482374 GCATGTGTCGGCAGCTTC 59.518 61.111 0.00 0.00 0.00 3.86
4757 8306 4.450053 GGCAGCTTCTGAGAGATTAACAT 58.550 43.478 0.00 0.00 32.44 2.71
4759 8308 6.051717 GGCAGCTTCTGAGAGATTAACATAA 58.948 40.000 0.00 0.00 32.44 1.90
4762 8311 7.574496 CAGCTTCTGAGAGATTAACATAATGC 58.426 38.462 0.00 0.00 32.44 3.56
4765 8314 8.068977 GCTTCTGAGAGATTAACATAATGCAAG 58.931 37.037 0.00 0.00 0.00 4.01
4834 8383 5.453339 CGCCTGGATTCTTTGGTAAGAGATA 60.453 44.000 0.00 0.00 41.25 1.98
4850 8399 1.851653 AGATACCGGACCAGGAGTAGT 59.148 52.381 9.46 0.00 34.73 2.73
4864 8413 3.118956 AGGAGTAGTAGCACGTACGTACT 60.119 47.826 23.62 23.62 36.66 2.73
4865 8414 4.098044 AGGAGTAGTAGCACGTACGTACTA 59.902 45.833 21.59 21.59 36.66 1.82
4876 8425 7.182761 AGCACGTACGTACTATAGTTTTGTAG 58.817 38.462 22.34 3.71 0.00 2.74
4907 9795 0.898326 GGCCAGTAAAACCACCTGGG 60.898 60.000 0.00 0.00 44.82 4.45
4926 9814 1.453155 GCTGGCGATTTTTCTGAGGA 58.547 50.000 0.00 0.00 0.00 3.71
5006 9912 1.984990 CGTTGCACACACCAATATTGC 59.015 47.619 10.11 0.00 0.00 3.56
5054 10522 8.953368 TTTATTTAAAAACGGTGGCCTTTTTA 57.047 26.923 13.55 13.55 34.59 1.52
5119 10611 6.670027 ACCATTTAGTCATACTTCTCACCTCT 59.330 38.462 0.00 0.00 0.00 3.69
5137 10629 2.429971 CTCTGATCAAGAGCTGGCTACA 59.570 50.000 0.00 0.00 45.93 2.74
5146 10642 4.078639 AGAGCTGGCTACATACAAATCC 57.921 45.455 0.00 0.00 0.00 3.01
5164 10678 0.247736 CCGCCATATCTAGCCACCTC 59.752 60.000 0.00 0.00 0.00 3.85
5403 17546 1.068417 TCGTTGTCGGACCACAAGG 59.932 57.895 12.20 16.70 41.48 3.61
5530 17717 3.833650 TCAATTGAAACCATCATGTGCCT 59.166 39.130 5.45 0.00 38.03 4.75
5556 17743 1.609208 AGAATAATCACGCCATGGCC 58.391 50.000 30.79 13.21 37.98 5.36
5617 17855 1.089920 GAGTCTGTTCATGGCGCATT 58.910 50.000 10.83 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.009310 GCATGCAATCTGAACTATCATTGGA 59.991 40.000 14.21 0.00 32.67 3.53
28 29 4.577693 ACGCATGCAATCTGAACTATCATT 59.422 37.500 19.57 0.00 34.37 2.57
31 32 4.277258 CAACGCATGCAATCTGAACTATC 58.723 43.478 19.57 0.00 0.00 2.08
32 33 4.282950 CAACGCATGCAATCTGAACTAT 57.717 40.909 19.57 0.00 0.00 2.12
55 56 3.309954 GCATCGGAAACTCCTACAATCAC 59.690 47.826 0.00 0.00 33.30 3.06
72 73 4.175337 ACCCCACATCCCGCATCG 62.175 66.667 0.00 0.00 0.00 3.84
74 75 1.567208 TAACACCCCACATCCCGCAT 61.567 55.000 0.00 0.00 0.00 4.73
75 76 1.567208 ATAACACCCCACATCCCGCA 61.567 55.000 0.00 0.00 0.00 5.69
77 78 0.179029 GGATAACACCCCACATCCCG 60.179 60.000 0.00 0.00 32.38 5.14
106 116 3.132646 GCAATTTCCAATGACTGGCCATA 59.867 43.478 5.51 0.00 45.98 2.74
107 117 2.093341 GCAATTTCCAATGACTGGCCAT 60.093 45.455 5.51 0.00 45.98 4.40
108 118 1.275856 GCAATTTCCAATGACTGGCCA 59.724 47.619 4.71 4.71 45.98 5.36
109 119 1.405933 GGCAATTTCCAATGACTGGCC 60.406 52.381 0.00 0.00 45.98 5.36
110 120 1.275856 TGGCAATTTCCAATGACTGGC 59.724 47.619 0.00 0.00 45.98 4.85
111 121 3.007182 ACTTGGCAATTTCCAATGACTGG 59.993 43.478 10.10 0.44 44.39 4.00
112 122 4.240096 GACTTGGCAATTTCCAATGACTG 58.760 43.478 10.10 1.14 44.39 3.51
113 123 3.259123 GGACTTGGCAATTTCCAATGACT 59.741 43.478 18.57 0.00 44.39 3.41
114 124 3.006752 TGGACTTGGCAATTTCCAATGAC 59.993 43.478 22.16 4.34 44.39 3.06
115 125 3.006752 GTGGACTTGGCAATTTCCAATGA 59.993 43.478 24.70 6.89 44.39 2.57
116 126 3.244146 TGTGGACTTGGCAATTTCCAATG 60.244 43.478 24.70 7.26 44.39 2.82
117 127 2.971330 TGTGGACTTGGCAATTTCCAAT 59.029 40.909 24.70 1.29 44.39 3.16
129 139 5.964958 AACAATTCTATGGTGTGGACTTG 57.035 39.130 0.00 0.00 35.16 3.16
134 144 7.864108 TTGATCTAACAATTCTATGGTGTGG 57.136 36.000 0.00 0.00 0.00 4.17
144 154 7.396540 ACAACCCTCATTGATCTAACAATTC 57.603 36.000 0.00 0.00 38.25 2.17
162 172 5.710099 TCCACAAATCTCAATCTAACAACCC 59.290 40.000 0.00 0.00 0.00 4.11
165 175 7.815840 TTGTCCACAAATCTCAATCTAACAA 57.184 32.000 0.00 0.00 32.11 2.83
180 190 2.417924 GCACCACACAATTTGTCCACAA 60.418 45.455 0.00 0.00 35.67 3.33
192 202 1.920734 AACCCAGTCAGCACCACACA 61.921 55.000 0.00 0.00 0.00 3.72
194 204 1.152984 CAACCCAGTCAGCACCACA 60.153 57.895 0.00 0.00 0.00 4.17
203 213 1.106944 CAACACCCCACAACCCAGTC 61.107 60.000 0.00 0.00 0.00 3.51
211 221 0.694783 TAGTCCCACAACACCCCACA 60.695 55.000 0.00 0.00 0.00 4.17
257 267 8.966868 CCCCACTACTATTAAACAATCAAACAT 58.033 33.333 0.00 0.00 0.00 2.71
281 291 1.760613 TCCAATGACTGACCGTATCCC 59.239 52.381 0.00 0.00 0.00 3.85
282 292 3.536956 TTCCAATGACTGACCGTATCC 57.463 47.619 0.00 0.00 0.00 2.59
283 293 5.730568 GCAATTTCCAATGACTGACCGTATC 60.731 44.000 0.00 0.00 0.00 2.24
284 294 4.096382 GCAATTTCCAATGACTGACCGTAT 59.904 41.667 0.00 0.00 0.00 3.06
286 296 2.228822 GCAATTTCCAATGACTGACCGT 59.771 45.455 0.00 0.00 0.00 4.83
287 297 2.728846 CGCAATTTCCAATGACTGACCG 60.729 50.000 0.00 0.00 0.00 4.79
290 300 3.820467 ACTTCGCAATTTCCAATGACTGA 59.180 39.130 0.00 0.00 0.00 3.41
291 301 4.161333 GACTTCGCAATTTCCAATGACTG 58.839 43.478 0.00 0.00 0.00 3.51
292 302 3.191371 GGACTTCGCAATTTCCAATGACT 59.809 43.478 0.00 0.00 0.00 3.41
293 303 3.057596 TGGACTTCGCAATTTCCAATGAC 60.058 43.478 0.00 0.00 35.13 3.06
295 305 3.244976 GTGGACTTCGCAATTTCCAATG 58.755 45.455 0.00 0.00 39.86 2.82
296 306 2.890311 TGTGGACTTCGCAATTTCCAAT 59.110 40.909 0.00 0.00 39.86 3.16
297 307 2.034053 GTGTGGACTTCGCAATTTCCAA 59.966 45.455 0.00 0.00 39.86 3.53
298 308 1.606668 GTGTGGACTTCGCAATTTCCA 59.393 47.619 0.00 0.00 37.65 3.53
299 309 1.068541 GGTGTGGACTTCGCAATTTCC 60.069 52.381 0.00 0.00 37.65 3.13
300 310 1.606668 TGGTGTGGACTTCGCAATTTC 59.393 47.619 0.00 0.00 37.65 2.17
301 311 1.686355 TGGTGTGGACTTCGCAATTT 58.314 45.000 0.00 0.00 37.65 1.82
302 312 1.909700 ATGGTGTGGACTTCGCAATT 58.090 45.000 0.00 0.00 37.65 2.32
303 313 2.236146 TCTATGGTGTGGACTTCGCAAT 59.764 45.455 0.00 0.00 37.65 3.56
304 314 1.621317 TCTATGGTGTGGACTTCGCAA 59.379 47.619 0.00 0.00 37.65 4.85
305 315 1.262417 TCTATGGTGTGGACTTCGCA 58.738 50.000 0.00 0.00 0.00 5.10
306 316 2.380084 TTCTATGGTGTGGACTTCGC 57.620 50.000 0.00 0.00 0.00 4.70
307 317 4.253685 ACAATTCTATGGTGTGGACTTCG 58.746 43.478 0.00 0.00 0.00 3.79
308 318 7.103641 TCTAACAATTCTATGGTGTGGACTTC 58.896 38.462 0.00 0.00 0.00 3.01
309 319 7.016153 TCTAACAATTCTATGGTGTGGACTT 57.984 36.000 0.00 0.00 0.00 3.01
310 320 6.620877 TCTAACAATTCTATGGTGTGGACT 57.379 37.500 0.00 0.00 0.00 3.85
311 321 7.047891 TGATCTAACAATTCTATGGTGTGGAC 58.952 38.462 0.00 0.00 0.00 4.02
312 322 7.194112 TGATCTAACAATTCTATGGTGTGGA 57.806 36.000 0.00 0.00 0.00 4.02
313 323 7.864108 TTGATCTAACAATTCTATGGTGTGG 57.136 36.000 0.00 0.00 0.00 4.17
314 324 9.112725 TCATTGATCTAACAATTCTATGGTGTG 57.887 33.333 0.00 0.00 38.25 3.82
315 325 9.334947 CTCATTGATCTAACAATTCTATGGTGT 57.665 33.333 0.00 0.00 38.25 4.16
316 326 8.781196 CCTCATTGATCTAACAATTCTATGGTG 58.219 37.037 0.00 0.00 38.25 4.17
317 327 7.941238 CCCTCATTGATCTAACAATTCTATGGT 59.059 37.037 0.00 0.00 38.25 3.55
318 328 7.094463 GCCCTCATTGATCTAACAATTCTATGG 60.094 40.741 0.00 0.00 38.25 2.74
319 329 7.664731 AGCCCTCATTGATCTAACAATTCTATG 59.335 37.037 0.00 0.00 38.25 2.23
320 330 7.664731 CAGCCCTCATTGATCTAACAATTCTAT 59.335 37.037 0.00 0.00 38.25 1.98
321 331 6.994496 CAGCCCTCATTGATCTAACAATTCTA 59.006 38.462 0.00 0.00 38.25 2.10
322 332 5.826737 CAGCCCTCATTGATCTAACAATTCT 59.173 40.000 0.00 0.00 38.25 2.40
323 333 5.591877 ACAGCCCTCATTGATCTAACAATTC 59.408 40.000 0.00 0.00 38.25 2.17
324 334 5.513233 ACAGCCCTCATTGATCTAACAATT 58.487 37.500 0.00 0.00 38.25 2.32
325 335 5.121380 ACAGCCCTCATTGATCTAACAAT 57.879 39.130 0.00 0.00 40.50 2.71
326 336 4.574674 ACAGCCCTCATTGATCTAACAA 57.425 40.909 0.00 0.00 0.00 2.83
327 337 4.574674 AACAGCCCTCATTGATCTAACA 57.425 40.909 0.00 0.00 0.00 2.41
328 338 5.918608 TCTAACAGCCCTCATTGATCTAAC 58.081 41.667 0.00 0.00 0.00 2.34
329 339 6.753913 ATCTAACAGCCCTCATTGATCTAA 57.246 37.500 0.00 0.00 0.00 2.10
330 340 6.327365 TCAATCTAACAGCCCTCATTGATCTA 59.673 38.462 0.00 0.00 0.00 1.98
331 341 5.131642 TCAATCTAACAGCCCTCATTGATCT 59.868 40.000 0.00 0.00 0.00 2.75
332 342 5.371526 TCAATCTAACAGCCCTCATTGATC 58.628 41.667 0.00 0.00 0.00 2.92
333 343 5.131642 TCTCAATCTAACAGCCCTCATTGAT 59.868 40.000 0.00 0.00 31.57 2.57
334 344 4.471025 TCTCAATCTAACAGCCCTCATTGA 59.529 41.667 0.00 0.00 0.00 2.57
335 345 4.774124 TCTCAATCTAACAGCCCTCATTG 58.226 43.478 0.00 0.00 0.00 2.82
336 346 5.643421 ATCTCAATCTAACAGCCCTCATT 57.357 39.130 0.00 0.00 0.00 2.57
337 347 5.643421 AATCTCAATCTAACAGCCCTCAT 57.357 39.130 0.00 0.00 0.00 2.90
338 348 5.188434 CAAATCTCAATCTAACAGCCCTCA 58.812 41.667 0.00 0.00 0.00 3.86
339 349 5.065731 CACAAATCTCAATCTAACAGCCCTC 59.934 44.000 0.00 0.00 0.00 4.30
340 350 4.946157 CACAAATCTCAATCTAACAGCCCT 59.054 41.667 0.00 0.00 0.00 5.19
341 351 4.096984 CCACAAATCTCAATCTAACAGCCC 59.903 45.833 0.00 0.00 0.00 5.19
342 352 4.943705 TCCACAAATCTCAATCTAACAGCC 59.056 41.667 0.00 0.00 0.00 4.85
343 353 5.412594 TGTCCACAAATCTCAATCTAACAGC 59.587 40.000 0.00 0.00 0.00 4.40
344 354 7.439157 TTGTCCACAAATCTCAATCTAACAG 57.561 36.000 0.00 0.00 32.11 3.16
345 355 7.815840 TTTGTCCACAAATCTCAATCTAACA 57.184 32.000 0.55 0.00 40.55 2.41
359 369 1.673400 CACCACACGATTTGTCCACAA 59.327 47.619 0.00 0.00 35.67 3.33
360 370 1.304254 CACCACACGATTTGTCCACA 58.696 50.000 0.00 0.00 35.67 4.17
361 371 0.040425 GCACCACACGATTTGTCCAC 60.040 55.000 0.00 0.00 35.67 4.02
362 372 0.179032 AGCACCACACGATTTGTCCA 60.179 50.000 0.00 0.00 35.67 4.02
363 373 0.238289 CAGCACCACACGATTTGTCC 59.762 55.000 0.00 0.00 35.67 4.02
364 374 1.069906 GTCAGCACCACACGATTTGTC 60.070 52.381 0.00 0.00 35.67 3.18
365 375 0.944386 GTCAGCACCACACGATTTGT 59.056 50.000 0.00 0.00 39.97 2.83
366 376 1.069703 CAGTCAGCACCACACGATTTG 60.070 52.381 0.00 0.00 0.00 2.32
367 377 1.229428 CAGTCAGCACCACACGATTT 58.771 50.000 0.00 0.00 0.00 2.17
368 378 0.603707 CCAGTCAGCACCACACGATT 60.604 55.000 0.00 0.00 0.00 3.34
369 379 1.004560 CCAGTCAGCACCACACGAT 60.005 57.895 0.00 0.00 0.00 3.73
370 380 2.421314 CCAGTCAGCACCACACGA 59.579 61.111 0.00 0.00 0.00 4.35
371 381 2.666190 CCCAGTCAGCACCACACG 60.666 66.667 0.00 0.00 0.00 4.49
372 382 1.598130 GACCCAGTCAGCACCACAC 60.598 63.158 0.00 0.00 32.09 3.82
373 383 2.828868 GACCCAGTCAGCACCACA 59.171 61.111 0.00 0.00 32.09 4.17
374 384 2.357517 CGACCCAGTCAGCACCAC 60.358 66.667 0.00 0.00 32.09 4.16
375 385 2.842462 ACGACCCAGTCAGCACCA 60.842 61.111 0.00 0.00 32.09 4.17
376 386 2.357517 CACGACCCAGTCAGCACC 60.358 66.667 0.00 0.00 32.09 5.01
377 387 2.357517 CCACGACCCAGTCAGCAC 60.358 66.667 0.00 0.00 32.09 4.40
378 388 3.625897 CCCACGACCCAGTCAGCA 61.626 66.667 0.00 0.00 32.09 4.41
379 389 3.311110 TCCCACGACCCAGTCAGC 61.311 66.667 0.00 0.00 32.09 4.26
380 390 0.611062 TAGTCCCACGACCCAGTCAG 60.611 60.000 0.00 0.00 40.12 3.51
381 391 0.178955 TTAGTCCCACGACCCAGTCA 60.179 55.000 0.00 0.00 40.12 3.41
382 392 1.192428 ATTAGTCCCACGACCCAGTC 58.808 55.000 0.00 0.00 40.12 3.51
383 393 1.278127 CAATTAGTCCCACGACCCAGT 59.722 52.381 0.00 0.00 40.12 4.00
384 394 2.012051 GCAATTAGTCCCACGACCCAG 61.012 57.143 0.00 0.00 40.12 4.45
385 395 0.035820 GCAATTAGTCCCACGACCCA 60.036 55.000 0.00 0.00 40.12 4.51
386 396 1.087771 CGCAATTAGTCCCACGACCC 61.088 60.000 0.00 0.00 40.12 4.46
387 397 1.087771 CCGCAATTAGTCCCACGACC 61.088 60.000 0.00 0.00 40.12 4.79
388 398 1.087771 CCCGCAATTAGTCCCACGAC 61.088 60.000 0.00 0.00 39.50 4.34
389 399 1.219664 CCCGCAATTAGTCCCACGA 59.780 57.895 0.00 0.00 0.00 4.35
390 400 1.817941 CCCCGCAATTAGTCCCACG 60.818 63.158 0.00 0.00 0.00 4.94
391 401 1.029947 CACCCCGCAATTAGTCCCAC 61.030 60.000 0.00 0.00 0.00 4.61
392 402 1.301623 CACCCCGCAATTAGTCCCA 59.698 57.895 0.00 0.00 0.00 4.37
393 403 2.119029 GCACCCCGCAATTAGTCCC 61.119 63.158 0.00 0.00 41.79 4.46
394 404 3.509659 GCACCCCGCAATTAGTCC 58.490 61.111 0.00 0.00 41.79 3.85
403 413 1.908066 CTTTCTTACGTGCACCCCGC 61.908 60.000 12.15 0.00 42.89 6.13
404 414 0.601841 ACTTTCTTACGTGCACCCCG 60.602 55.000 12.15 1.82 0.00 5.73
405 415 1.534163 GAACTTTCTTACGTGCACCCC 59.466 52.381 12.15 0.00 0.00 4.95
406 416 2.215196 TGAACTTTCTTACGTGCACCC 58.785 47.619 12.15 0.00 0.00 4.61
407 417 3.250040 ACATGAACTTTCTTACGTGCACC 59.750 43.478 12.15 0.00 0.00 5.01
408 418 4.468095 ACATGAACTTTCTTACGTGCAC 57.532 40.909 6.82 6.82 0.00 4.57
409 419 5.493133 AAACATGAACTTTCTTACGTGCA 57.507 34.783 0.00 0.00 0.00 4.57
410 420 9.262472 CTATTAAACATGAACTTTCTTACGTGC 57.738 33.333 0.00 0.00 0.00 5.34
411 421 9.755064 CCTATTAAACATGAACTTTCTTACGTG 57.245 33.333 0.00 0.00 0.00 4.49
412 422 9.715121 TCCTATTAAACATGAACTTTCTTACGT 57.285 29.630 0.00 0.00 0.00 3.57
461 471 9.365906 ACATGGGCATTGTTGATTATAGATTTA 57.634 29.630 0.00 0.00 0.00 1.40
472 482 7.395772 TCTTTAAATAGACATGGGCATTGTTGA 59.604 33.333 0.00 0.00 0.00 3.18
478 488 6.208204 GCATCTCTTTAAATAGACATGGGCAT 59.792 38.462 5.51 0.00 0.00 4.40
480 490 5.767168 AGCATCTCTTTAAATAGACATGGGC 59.233 40.000 5.51 5.56 0.00 5.36
517 527 8.931385 ATTGATGTCGATAAGGGAAAATTTTG 57.069 30.769 8.47 0.00 0.00 2.44
522 533 6.591935 AGCTATTGATGTCGATAAGGGAAAA 58.408 36.000 0.00 0.00 0.00 2.29
526 537 4.021104 TGGAGCTATTGATGTCGATAAGGG 60.021 45.833 0.00 0.00 0.00 3.95
530 541 5.791336 AGTTGGAGCTATTGATGTCGATA 57.209 39.130 0.00 0.00 0.00 2.92
549 560 5.733676 ACAAGCAAGGAAATGAACAAAGTT 58.266 33.333 0.00 0.00 0.00 2.66
571 582 5.941948 ACTGGTAGAGTATTGTTGCAAAC 57.058 39.130 0.00 0.00 39.56 2.93
582 593 4.087182 CCAGAGTCCAAACTGGTAGAGTA 58.913 47.826 0.00 0.00 45.82 2.59
625 636 9.355215 CGTGTAAAAGAAGAACTCATATGTAGT 57.645 33.333 1.90 2.54 0.00 2.73
627 638 9.569167 CTCGTGTAAAAGAAGAACTCATATGTA 57.431 33.333 1.90 0.00 0.00 2.29
638 649 2.806608 ACGCCTCGTGTAAAAGAAGA 57.193 45.000 0.00 0.00 39.18 2.87
639 650 3.660904 CGAAACGCCTCGTGTAAAAGAAG 60.661 47.826 0.00 0.00 39.99 2.85
640 651 2.219216 CGAAACGCCTCGTGTAAAAGAA 59.781 45.455 0.00 0.00 39.99 2.52
672 683 5.171339 AGTCTTCTCTGCATGGTTTGTAT 57.829 39.130 0.00 0.00 0.00 2.29
673 684 4.623932 AGTCTTCTCTGCATGGTTTGTA 57.376 40.909 0.00 0.00 0.00 2.41
681 692 1.115467 CCCCGTAGTCTTCTCTGCAT 58.885 55.000 0.00 0.00 0.00 3.96
684 695 1.135333 GCTTCCCCGTAGTCTTCTCTG 59.865 57.143 0.00 0.00 0.00 3.35
685 696 1.272536 TGCTTCCCCGTAGTCTTCTCT 60.273 52.381 0.00 0.00 0.00 3.10
707 725 6.436847 TGTCATAGGAATCTTGCAAATTTGGA 59.563 34.615 19.47 14.42 0.00 3.53
712 730 6.350445 GGTGTTGTCATAGGAATCTTGCAAAT 60.350 38.462 0.00 0.00 0.00 2.32
734 752 6.615264 ATTGATCGATTGAGATTTGAGGTG 57.385 37.500 0.00 0.00 0.00 4.00
740 758 7.972277 CACAAAGGAATTGATCGATTGAGATTT 59.028 33.333 13.12 5.76 41.85 2.17
743 761 5.939883 ACACAAAGGAATTGATCGATTGAGA 59.060 36.000 13.12 0.00 41.85 3.27
748 766 6.430925 TGAAGAACACAAAGGAATTGATCGAT 59.569 34.615 0.00 0.00 41.85 3.59
750 768 6.000891 TGAAGAACACAAAGGAATTGATCG 57.999 37.500 0.00 0.00 41.85 3.69
755 773 9.617523 AAATCATTTGAAGAACACAAAGGAATT 57.382 25.926 10.68 7.04 45.85 2.17
756 774 9.617523 AAAATCATTTGAAGAACACAAAGGAAT 57.382 25.926 10.68 1.92 45.85 3.01
802 820 8.656806 CCCCTTGAGTTCCATACTGTATATAAA 58.343 37.037 0.00 0.00 37.17 1.40
803 821 7.256547 GCCCCTTGAGTTCCATACTGTATATAA 60.257 40.741 0.00 0.00 37.17 0.98
804 822 6.212791 GCCCCTTGAGTTCCATACTGTATATA 59.787 42.308 0.00 0.00 37.17 0.86
805 823 5.013183 GCCCCTTGAGTTCCATACTGTATAT 59.987 44.000 0.00 0.00 37.17 0.86
806 824 4.347000 GCCCCTTGAGTTCCATACTGTATA 59.653 45.833 0.00 0.00 37.17 1.47
807 825 3.136626 GCCCCTTGAGTTCCATACTGTAT 59.863 47.826 0.00 0.00 37.17 2.29
808 826 2.504175 GCCCCTTGAGTTCCATACTGTA 59.496 50.000 0.00 0.00 37.17 2.74
809 827 1.282157 GCCCCTTGAGTTCCATACTGT 59.718 52.381 0.00 0.00 37.17 3.55
810 828 1.281867 TGCCCCTTGAGTTCCATACTG 59.718 52.381 0.00 0.00 37.17 2.74
811 829 1.282157 GTGCCCCTTGAGTTCCATACT 59.718 52.381 0.00 0.00 40.71 2.12
812 830 1.282157 AGTGCCCCTTGAGTTCCATAC 59.718 52.381 0.00 0.00 0.00 2.39
813 831 1.668826 AGTGCCCCTTGAGTTCCATA 58.331 50.000 0.00 0.00 0.00 2.74
814 832 0.779997 AAGTGCCCCTTGAGTTCCAT 59.220 50.000 0.00 0.00 30.18 3.41
815 833 0.555769 AAAGTGCCCCTTGAGTTCCA 59.444 50.000 0.00 0.00 32.32 3.53
816 834 0.961753 CAAAGTGCCCCTTGAGTTCC 59.038 55.000 0.00 0.00 32.32 3.62
817 835 1.981256 TCAAAGTGCCCCTTGAGTTC 58.019 50.000 0.00 0.00 32.32 3.01
818 836 2.683211 ATCAAAGTGCCCCTTGAGTT 57.317 45.000 0.00 0.00 32.32 3.01
819 837 4.019174 CAATATCAAAGTGCCCCTTGAGT 58.981 43.478 0.00 0.00 32.32 3.41
820 838 4.272489 TCAATATCAAAGTGCCCCTTGAG 58.728 43.478 0.00 0.00 32.32 3.02
821 839 4.314522 TCAATATCAAAGTGCCCCTTGA 57.685 40.909 0.00 0.00 32.32 3.02
822 840 5.047092 AGTTTCAATATCAAAGTGCCCCTTG 60.047 40.000 0.00 0.00 32.32 3.61
823 841 5.086621 AGTTTCAATATCAAAGTGCCCCTT 58.913 37.500 0.00 0.00 33.79 3.95
824 842 4.677182 AGTTTCAATATCAAAGTGCCCCT 58.323 39.130 0.00 0.00 0.00 4.79
825 843 4.462483 TGAGTTTCAATATCAAAGTGCCCC 59.538 41.667 0.00 0.00 0.00 5.80
826 844 5.643379 TGAGTTTCAATATCAAAGTGCCC 57.357 39.130 0.00 0.00 0.00 5.36
827 845 6.095377 CCTTGAGTTTCAATATCAAAGTGCC 58.905 40.000 0.00 0.00 35.59 5.01
828 846 6.095377 CCCTTGAGTTTCAATATCAAAGTGC 58.905 40.000 0.00 0.00 35.59 4.40
829 847 6.624423 CCCCTTGAGTTTCAATATCAAAGTG 58.376 40.000 0.00 0.00 35.59 3.16
830 848 5.185828 GCCCCTTGAGTTTCAATATCAAAGT 59.814 40.000 0.00 0.00 35.59 2.66
831 849 5.185635 TGCCCCTTGAGTTTCAATATCAAAG 59.814 40.000 0.00 0.00 35.59 2.77
832 850 5.047377 GTGCCCCTTGAGTTTCAATATCAAA 60.047 40.000 0.00 0.00 35.59 2.69
833 851 4.462483 GTGCCCCTTGAGTTTCAATATCAA 59.538 41.667 0.00 0.00 35.59 2.57
834 852 4.016444 GTGCCCCTTGAGTTTCAATATCA 58.984 43.478 0.00 0.00 35.59 2.15
835 853 4.273318 AGTGCCCCTTGAGTTTCAATATC 58.727 43.478 0.00 0.00 35.59 1.63
836 854 4.322057 AGTGCCCCTTGAGTTTCAATAT 57.678 40.909 0.00 0.00 35.59 1.28
837 855 3.806949 AGTGCCCCTTGAGTTTCAATA 57.193 42.857 0.00 0.00 35.59 1.90
838 856 2.683211 AGTGCCCCTTGAGTTTCAAT 57.317 45.000 0.00 0.00 35.59 2.57
839 857 2.430332 CAAAGTGCCCCTTGAGTTTCAA 59.570 45.455 0.00 0.00 34.79 2.69
961 979 3.638627 TCAGAGTTTCAGACTTGAGCTCA 59.361 43.478 13.74 13.74 39.19 4.26
977 995 3.114065 GAGTTTCGTGTCGTTTCAGAGT 58.886 45.455 0.00 0.00 0.00 3.24
1006 1024 1.300481 GATTGGGTTTCTCGGCTAGC 58.700 55.000 6.04 6.04 0.00 3.42
1015 1033 1.737793 CGCTGTACTGGATTGGGTTTC 59.262 52.381 1.65 0.00 0.00 2.78
1250 1287 1.403514 GCTCCTCTCTGAACTCAACCG 60.404 57.143 0.00 0.00 0.00 4.44
1427 1464 3.464907 CAGAGGATAGCAACACCAGATG 58.535 50.000 0.00 0.00 0.00 2.90
1428 1465 2.158842 GCAGAGGATAGCAACACCAGAT 60.159 50.000 0.00 0.00 0.00 2.90
1431 1468 0.983467 TGCAGAGGATAGCAACACCA 59.017 50.000 0.00 0.00 37.90 4.17
1432 1469 2.113860 TTGCAGAGGATAGCAACACC 57.886 50.000 0.00 0.00 44.98 4.16
1443 1480 1.078497 TGGCGTACCATTGCAGAGG 60.078 57.895 5.07 5.07 42.67 3.69
1454 1491 2.340453 TAAGCGATCCCGTGGCGTAC 62.340 60.000 0.00 0.00 36.56 3.67
1584 1621 2.417107 GCATGCACCGGATGAATTTTCA 60.417 45.455 14.21 0.00 42.14 2.69
1632 1670 7.582667 TGCAGACAGAGCTAGTTTACATATA 57.417 36.000 0.00 0.00 0.00 0.86
1651 1689 5.665916 TTAGATCAGTCAGTTCATGCAGA 57.334 39.130 0.00 0.00 0.00 4.26
1759 1799 1.131315 GAGGATGAGGCGCAAAAAGTC 59.869 52.381 10.83 0.00 0.00 3.01
1773 1813 0.395686 ATGGGATGTCTGCGAGGATG 59.604 55.000 0.00 0.00 0.00 3.51
1795 1837 4.130118 AGTTTCTCAGAACGCAGAACAAT 58.870 39.130 0.00 0.00 34.74 2.71
1843 1887 4.765273 TGCGGTACTCATTAATCATGTGT 58.235 39.130 0.00 0.00 41.50 3.72
1925 1969 1.069296 TCAAATTTCAGAAGCGTGCGG 60.069 47.619 0.00 0.00 0.00 5.69
1926 1970 2.314561 TCAAATTTCAGAAGCGTGCG 57.685 45.000 0.00 0.00 0.00 5.34
1983 2033 7.811713 GCAGAAAATGAGTGAAAAGAATAAGCT 59.188 33.333 0.00 0.00 0.00 3.74
2061 2112 4.080638 TGGACTACATGTGCATAATGTCCA 60.081 41.667 18.16 18.41 46.82 4.02
2118 2169 3.447918 TCGTCTTTCGAAAGTTGGAGT 57.552 42.857 31.29 0.00 45.98 3.85
2168 2219 5.801531 ATTGGCATCACATTCAATAGCAT 57.198 34.783 0.00 0.00 0.00 3.79
2171 2222 6.802608 ACTCAATTGGCATCACATTCAATAG 58.197 36.000 5.42 0.00 30.67 1.73
2186 2237 4.714308 AGAGAGGGAGTAGAACTCAATTGG 59.286 45.833 5.42 0.00 46.79 3.16
2232 2283 7.942990 AGCGCTTAGATCACTACTTTAGTTAT 58.057 34.615 2.64 0.00 36.76 1.89
2234 2285 6.095720 AGAGCGCTTAGATCACTACTTTAGTT 59.904 38.462 13.26 0.00 37.82 2.24
2236 2287 6.067263 AGAGCGCTTAGATCACTACTTTAG 57.933 41.667 13.26 0.00 37.82 1.85
2239 2290 4.993029 AAGAGCGCTTAGATCACTACTT 57.007 40.909 13.26 2.70 37.82 2.24
2241 2292 8.973835 AAATATAAGAGCGCTTAGATCACTAC 57.026 34.615 13.26 0.00 37.50 2.73
2242 2293 9.015367 AGAAATATAAGAGCGCTTAGATCACTA 57.985 33.333 13.26 3.60 37.50 2.74
2243 2294 7.891561 AGAAATATAAGAGCGCTTAGATCACT 58.108 34.615 13.26 14.58 37.50 3.41
2244 2295 8.527567 AAGAAATATAAGAGCGCTTAGATCAC 57.472 34.615 13.26 12.97 37.50 3.06
2248 2299 7.594015 CCGTAAAGAAATATAAGAGCGCTTAGA 59.406 37.037 13.26 11.33 39.79 2.10
2249 2300 7.594015 TCCGTAAAGAAATATAAGAGCGCTTAG 59.406 37.037 13.26 0.00 39.79 2.18
2250 2301 7.428020 TCCGTAAAGAAATATAAGAGCGCTTA 58.572 34.615 13.26 12.50 40.65 3.09
2254 2305 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
2255 2306 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2256 2307 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2257 2308 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2264 2315 8.081517 TGAATAATACTCCCTCCGTAAAGAAA 57.918 34.615 0.00 0.00 0.00 2.52
2267 2318 7.038941 AGGATGAATAATACTCCCTCCGTAAAG 60.039 40.741 0.00 0.00 0.00 1.85
2268 2319 6.785963 AGGATGAATAATACTCCCTCCGTAAA 59.214 38.462 0.00 0.00 0.00 2.01
2269 2320 6.320518 AGGATGAATAATACTCCCTCCGTAA 58.679 40.000 0.00 0.00 0.00 3.18
2270 2321 5.900437 AGGATGAATAATACTCCCTCCGTA 58.100 41.667 0.00 0.00 0.00 4.02
2300 2364 3.861113 TCTGTTTCACTGTGTACAACGTC 59.139 43.478 7.79 0.00 0.00 4.34
2302 2366 4.506288 TGATCTGTTTCACTGTGTACAACG 59.494 41.667 7.79 0.00 0.00 4.10
2308 2372 4.202398 ACCATCTGATCTGTTTCACTGTGT 60.202 41.667 7.79 0.00 0.00 3.72
2309 2373 4.321718 ACCATCTGATCTGTTTCACTGTG 58.678 43.478 0.17 0.17 0.00 3.66
2356 2425 2.091885 AGAGCCAGAAAAGGTGGTTTCA 60.092 45.455 0.97 0.00 39.52 2.69
2369 2438 5.188434 CCTGAAATAACAATCAGAGCCAGA 58.812 41.667 4.43 0.00 44.64 3.86
2370 2439 4.946157 ACCTGAAATAACAATCAGAGCCAG 59.054 41.667 4.43 0.00 44.64 4.85
2371 2440 4.922206 ACCTGAAATAACAATCAGAGCCA 58.078 39.130 4.43 0.00 44.64 4.75
2372 2441 4.943705 TGACCTGAAATAACAATCAGAGCC 59.056 41.667 4.43 0.00 44.64 4.70
2373 2442 6.404074 CCTTGACCTGAAATAACAATCAGAGC 60.404 42.308 4.43 0.00 44.64 4.09
2534 2680 6.309737 GCAAAAGATGAGCTCCATTTACAAAG 59.690 38.462 12.15 0.00 35.17 2.77
2796 2947 4.362677 TCAGCCTCAAGAAGTATACCCTT 58.637 43.478 0.00 0.87 0.00 3.95
2873 3024 1.329599 GAAAGTCGCAAACCTTGTCGT 59.670 47.619 0.00 0.00 33.85 4.34
3281 3435 4.322057 AACCCTTGCAGATGGTAAGAAT 57.678 40.909 4.53 0.00 41.24 2.40
3366 3602 9.740239 GAGGACGACATATACAAGTATTTTGTA 57.260 33.333 0.00 2.61 38.99 2.41
3367 3603 8.255206 TGAGGACGACATATACAAGTATTTTGT 58.745 33.333 0.00 3.66 36.49 2.83
3368 3604 8.642908 TGAGGACGACATATACAAGTATTTTG 57.357 34.615 0.00 0.72 0.00 2.44
3372 3608 8.740906 CCTTATGAGGACGACATATACAAGTAT 58.259 37.037 0.00 0.00 46.74 2.12
3373 3609 8.107399 CCTTATGAGGACGACATATACAAGTA 57.893 38.462 0.00 0.00 46.74 2.24
3374 3610 6.982852 CCTTATGAGGACGACATATACAAGT 58.017 40.000 0.00 0.00 46.74 3.16
3401 3637 5.955959 GGGGTGGTGGTTATAGATTCTTTTT 59.044 40.000 0.00 0.00 0.00 1.94
3402 3638 5.015817 TGGGGTGGTGGTTATAGATTCTTTT 59.984 40.000 0.00 0.00 0.00 2.27
3403 3639 4.542525 TGGGGTGGTGGTTATAGATTCTTT 59.457 41.667 0.00 0.00 0.00 2.52
3404 3640 4.116113 TGGGGTGGTGGTTATAGATTCTT 58.884 43.478 0.00 0.00 0.00 2.52
3405 3641 3.743132 TGGGGTGGTGGTTATAGATTCT 58.257 45.455 0.00 0.00 0.00 2.40
3406 3642 4.513406 TTGGGGTGGTGGTTATAGATTC 57.487 45.455 0.00 0.00 0.00 2.52
3471 3707 1.327303 GCACATGTTTTGACAGGGGA 58.673 50.000 0.00 0.00 0.00 4.81
3516 3752 2.304761 CTCCTAACCCAGCACCTAAACA 59.695 50.000 0.00 0.00 0.00 2.83
3541 3777 7.079451 AGGATCAATAGGATTTACGAACCAT 57.921 36.000 0.00 0.00 36.00 3.55
3685 3976 8.877808 TCTGAATGCTAAACAGATATAGTGTG 57.122 34.615 0.00 0.00 36.04 3.82
3691 3982 7.172190 CGGTTGATCTGAATGCTAAACAGATAT 59.828 37.037 0.00 0.00 46.75 1.63
3813 6519 1.262950 TCTTTTGTCACGGTGCAATCG 59.737 47.619 15.25 8.86 0.00 3.34
3957 6663 2.680805 GCTCATTTCGTCCCAGGAATCA 60.681 50.000 0.00 0.00 0.00 2.57
4048 6754 1.588239 TGCTCCAGGTTCATGATCCT 58.412 50.000 18.06 18.06 33.96 3.24
4049 6755 2.106166 AGATGCTCCAGGTTCATGATCC 59.894 50.000 14.07 14.07 0.00 3.36
4050 6756 3.488778 AGATGCTCCAGGTTCATGATC 57.511 47.619 0.00 0.00 0.00 2.92
4051 6757 3.053842 ACAAGATGCTCCAGGTTCATGAT 60.054 43.478 0.00 0.00 0.00 2.45
4052 6758 2.306805 ACAAGATGCTCCAGGTTCATGA 59.693 45.455 0.00 0.00 0.00 3.07
4053 6759 2.422479 CACAAGATGCTCCAGGTTCATG 59.578 50.000 1.67 0.00 0.00 3.07
4054 6760 2.306805 TCACAAGATGCTCCAGGTTCAT 59.693 45.455 0.00 0.00 0.00 2.57
4055 6761 1.699083 TCACAAGATGCTCCAGGTTCA 59.301 47.619 0.00 0.00 0.00 3.18
4056 6762 2.479566 TCACAAGATGCTCCAGGTTC 57.520 50.000 0.00 0.00 0.00 3.62
4057 6763 2.787994 CTTCACAAGATGCTCCAGGTT 58.212 47.619 0.00 0.00 0.00 3.50
4058 6764 1.612726 GCTTCACAAGATGCTCCAGGT 60.613 52.381 0.00 0.00 40.64 4.00
4059 6765 1.093159 GCTTCACAAGATGCTCCAGG 58.907 55.000 0.00 0.00 40.64 4.45
4060 6766 1.093159 GGCTTCACAAGATGCTCCAG 58.907 55.000 0.00 0.00 42.70 3.86
4061 6767 0.401356 TGGCTTCACAAGATGCTCCA 59.599 50.000 0.00 0.00 42.70 3.86
4062 6768 1.093159 CTGGCTTCACAAGATGCTCC 58.907 55.000 0.00 0.00 42.70 4.70
4063 6769 2.008329 CTCTGGCTTCACAAGATGCTC 58.992 52.381 0.00 0.00 42.70 4.26
4064 6770 1.949547 GCTCTGGCTTCACAAGATGCT 60.950 52.381 0.00 0.00 42.70 3.79
4066 6772 1.093159 GGCTCTGGCTTCACAAGATG 58.907 55.000 0.00 0.00 38.73 2.90
4067 6773 0.392193 CGGCTCTGGCTTCACAAGAT 60.392 55.000 0.00 0.00 38.73 2.40
4068 6774 1.004560 CGGCTCTGGCTTCACAAGA 60.005 57.895 0.00 0.00 38.73 3.02
4069 6775 2.037136 CCGGCTCTGGCTTCACAAG 61.037 63.158 0.00 0.00 38.73 3.16
4071 6777 2.922503 TCCGGCTCTGGCTTCACA 60.923 61.111 0.00 0.00 38.73 3.58
4072 6778 2.125350 CTCCGGCTCTGGCTTCAC 60.125 66.667 0.00 0.00 38.73 3.18
4084 6790 4.785453 GACCTTGGCAGGCTCCGG 62.785 72.222 0.00 0.00 45.56 5.14
4087 6793 3.909086 AAGCGACCTTGGCAGGCTC 62.909 63.158 0.00 0.00 45.56 4.70
4088 6794 3.958860 AAGCGACCTTGGCAGGCT 61.959 61.111 0.00 0.00 45.56 4.58
4090 6796 2.032528 TCAAGCGACCTTGGCAGG 59.967 61.111 3.86 2.01 46.69 4.85
4094 6800 0.249868 TGTCTGTCAAGCGACCTTGG 60.250 55.000 3.86 0.00 46.69 3.61
4096 6802 1.344438 TGATGTCTGTCAAGCGACCTT 59.656 47.619 0.00 0.00 41.85 3.50
4097 6803 0.969149 TGATGTCTGTCAAGCGACCT 59.031 50.000 0.00 0.00 41.85 3.85
4098 6804 1.071605 GTGATGTCTGTCAAGCGACC 58.928 55.000 0.00 0.00 41.85 4.79
4099 6805 1.071605 GGTGATGTCTGTCAAGCGAC 58.928 55.000 0.00 0.00 42.93 5.19
4100 6806 0.678950 TGGTGATGTCTGTCAAGCGA 59.321 50.000 0.00 0.00 0.00 4.93
4101 6807 1.073964 CTGGTGATGTCTGTCAAGCG 58.926 55.000 0.00 0.00 0.00 4.68
4102 6808 0.801251 GCTGGTGATGTCTGTCAAGC 59.199 55.000 0.00 0.00 0.00 4.01
4105 6811 1.973515 AGAAGCTGGTGATGTCTGTCA 59.026 47.619 0.00 0.00 0.00 3.58
4106 6812 2.740981 CAAGAAGCTGGTGATGTCTGTC 59.259 50.000 0.00 0.00 0.00 3.51
4107 6813 2.105477 ACAAGAAGCTGGTGATGTCTGT 59.895 45.455 0.00 0.00 0.00 3.41
4108 6814 2.775890 ACAAGAAGCTGGTGATGTCTG 58.224 47.619 0.00 0.00 0.00 3.51
4110 6816 2.675348 GCTACAAGAAGCTGGTGATGTC 59.325 50.000 0.00 0.00 39.50 3.06
4112 6818 2.012673 GGCTACAAGAAGCTGGTGATG 58.987 52.381 0.00 0.00 42.37 3.07
4114 6820 1.352083 AGGCTACAAGAAGCTGGTGA 58.648 50.000 0.00 0.00 42.37 4.02
4115 6821 2.079925 GAAGGCTACAAGAAGCTGGTG 58.920 52.381 0.00 0.00 42.37 4.17
4116 6822 1.981495 AGAAGGCTACAAGAAGCTGGT 59.019 47.619 0.00 0.00 42.37 4.00
4118 6824 3.608316 AGAGAAGGCTACAAGAAGCTG 57.392 47.619 0.00 0.00 42.37 4.24
4119 6825 3.580458 TCAAGAGAAGGCTACAAGAAGCT 59.420 43.478 0.00 0.00 42.37 3.74
4120 6826 3.682377 GTCAAGAGAAGGCTACAAGAAGC 59.318 47.826 0.00 0.00 41.99 3.86
4121 6827 5.146010 AGTCAAGAGAAGGCTACAAGAAG 57.854 43.478 0.00 0.00 0.00 2.85
4122 6828 5.775701 AGTAGTCAAGAGAAGGCTACAAGAA 59.224 40.000 7.58 0.00 35.71 2.52
4123 6829 5.326069 AGTAGTCAAGAGAAGGCTACAAGA 58.674 41.667 7.58 0.00 35.71 3.02
4124 6830 5.652994 AGTAGTCAAGAGAAGGCTACAAG 57.347 43.478 7.58 0.00 35.71 3.16
4127 6833 6.028987 CGTAAAGTAGTCAAGAGAAGGCTAC 58.971 44.000 0.00 0.00 34.05 3.58
4129 6835 4.523558 ACGTAAAGTAGTCAAGAGAAGGCT 59.476 41.667 0.00 0.00 0.00 4.58
4130 6836 4.807443 ACGTAAAGTAGTCAAGAGAAGGC 58.193 43.478 0.00 0.00 0.00 4.35
4133 6839 6.261603 TCACAGACGTAAAGTAGTCAAGAGAA 59.738 38.462 0.00 0.00 39.67 2.87
4135 6841 5.998553 TCACAGACGTAAAGTAGTCAAGAG 58.001 41.667 0.00 0.00 39.67 2.85
4139 6845 5.952526 TGATCACAGACGTAAAGTAGTCA 57.047 39.130 0.00 0.00 39.67 3.41
4140 6846 6.251589 CACATGATCACAGACGTAAAGTAGTC 59.748 42.308 0.00 0.00 37.63 2.59
4141 6847 6.072119 TCACATGATCACAGACGTAAAGTAGT 60.072 38.462 0.00 0.00 0.00 2.73
4144 6850 5.134202 TCACATGATCACAGACGTAAAGT 57.866 39.130 0.00 0.00 0.00 2.66
4145 6851 5.863935 TCTTCACATGATCACAGACGTAAAG 59.136 40.000 0.00 0.00 0.00 1.85
4146 6852 5.778862 TCTTCACATGATCACAGACGTAAA 58.221 37.500 0.00 0.00 0.00 2.01
4147 6853 5.385509 TCTTCACATGATCACAGACGTAA 57.614 39.130 0.00 0.00 0.00 3.18
4149 6855 3.942130 TCTTCACATGATCACAGACGT 57.058 42.857 0.00 0.00 0.00 4.34
4150 6856 7.114106 GTGTATATCTTCACATGATCACAGACG 59.886 40.741 0.00 0.00 35.04 4.18
4151 6857 8.140628 AGTGTATATCTTCACATGATCACAGAC 58.859 37.037 0.00 0.00 37.07 3.51
4153 6859 8.139989 TCAGTGTATATCTTCACATGATCACAG 58.860 37.037 0.00 0.00 37.07 3.66
4154 6860 7.922811 GTCAGTGTATATCTTCACATGATCACA 59.077 37.037 0.00 0.00 37.07 3.58
4155 6861 7.922811 TGTCAGTGTATATCTTCACATGATCAC 59.077 37.037 0.00 0.00 37.07 3.06
4156 6862 8.010733 TGTCAGTGTATATCTTCACATGATCA 57.989 34.615 0.00 0.00 37.07 2.92
4157 6863 8.140628 ACTGTCAGTGTATATCTTCACATGATC 58.859 37.037 4.21 0.00 37.07 2.92
4159 6865 7.410120 ACTGTCAGTGTATATCTTCACATGA 57.590 36.000 4.21 6.25 37.07 3.07
4160 6866 8.385858 CAAACTGTCAGTGTATATCTTCACATG 58.614 37.037 6.18 0.00 37.07 3.21
4163 6869 8.534333 TTCAAACTGTCAGTGTATATCTTCAC 57.466 34.615 6.18 0.00 35.13 3.18
4164 6870 9.208022 CTTTCAAACTGTCAGTGTATATCTTCA 57.792 33.333 6.18 0.00 0.00 3.02
4165 6871 9.209175 ACTTTCAAACTGTCAGTGTATATCTTC 57.791 33.333 6.18 0.00 0.00 2.87
4166 6872 9.561069 AACTTTCAAACTGTCAGTGTATATCTT 57.439 29.630 6.18 0.00 0.00 2.40
4167 6873 8.993121 CAACTTTCAAACTGTCAGTGTATATCT 58.007 33.333 6.18 0.00 0.00 1.98
4170 6876 6.017440 GCCAACTTTCAAACTGTCAGTGTATA 60.017 38.462 6.18 0.00 0.00 1.47
4171 6877 5.221048 GCCAACTTTCAAACTGTCAGTGTAT 60.221 40.000 6.18 0.00 0.00 2.29
4172 6878 4.095782 GCCAACTTTCAAACTGTCAGTGTA 59.904 41.667 6.18 0.00 0.00 2.90
4173 6879 3.119495 GCCAACTTTCAAACTGTCAGTGT 60.119 43.478 6.18 0.00 0.00 3.55
4174 6880 3.119531 TGCCAACTTTCAAACTGTCAGTG 60.120 43.478 6.18 0.00 0.00 3.66
4175 6881 3.088532 TGCCAACTTTCAAACTGTCAGT 58.911 40.909 0.00 0.00 0.00 3.41
4176 6882 3.438360 GTGCCAACTTTCAAACTGTCAG 58.562 45.455 0.00 0.00 0.00 3.51
4178 6884 2.450160 CGTGCCAACTTTCAAACTGTC 58.550 47.619 0.00 0.00 0.00 3.51
4180 6886 1.199624 GCGTGCCAACTTTCAAACTG 58.800 50.000 0.00 0.00 0.00 3.16
4181 6887 0.102300 GGCGTGCCAACTTTCAAACT 59.898 50.000 5.89 0.00 35.81 2.66
4182 6888 0.874175 GGGCGTGCCAACTTTCAAAC 60.874 55.000 13.76 0.00 37.98 2.93
4184 6890 0.179015 TAGGGCGTGCCAACTTTCAA 60.179 50.000 13.76 0.00 37.98 2.69
4185 6891 0.887387 GTAGGGCGTGCCAACTTTCA 60.887 55.000 13.76 0.00 37.98 2.69
4186 6892 0.887387 TGTAGGGCGTGCCAACTTTC 60.887 55.000 13.76 0.00 37.98 2.62
4189 6895 0.251165 ATTTGTAGGGCGTGCCAACT 60.251 50.000 13.76 4.05 37.98 3.16
4192 6898 2.339556 GCATTTGTAGGGCGTGCCA 61.340 57.895 13.76 0.00 37.98 4.92
4193 6899 1.872197 TTGCATTTGTAGGGCGTGCC 61.872 55.000 1.16 1.16 35.03 5.01
4195 6901 1.164411 TCTTGCATTTGTAGGGCGTG 58.836 50.000 0.00 0.00 0.00 5.34
4197 6903 2.539547 CGATTCTTGCATTTGTAGGGCG 60.540 50.000 0.00 0.00 0.00 6.13
4198 6904 2.223572 CCGATTCTTGCATTTGTAGGGC 60.224 50.000 0.00 0.00 0.00 5.19
4199 6905 2.358898 CCCGATTCTTGCATTTGTAGGG 59.641 50.000 0.00 0.00 0.00 3.53
4200 6906 2.358898 CCCCGATTCTTGCATTTGTAGG 59.641 50.000 0.00 0.00 0.00 3.18
4202 6908 3.358111 TCCCCGATTCTTGCATTTGTA 57.642 42.857 0.00 0.00 0.00 2.41
4203 6909 2.214376 TCCCCGATTCTTGCATTTGT 57.786 45.000 0.00 0.00 0.00 2.83
4204 6910 2.493278 ACTTCCCCGATTCTTGCATTTG 59.507 45.455 0.00 0.00 0.00 2.32
4205 6911 2.807676 ACTTCCCCGATTCTTGCATTT 58.192 42.857 0.00 0.00 0.00 2.32
4206 6912 2.514458 ACTTCCCCGATTCTTGCATT 57.486 45.000 0.00 0.00 0.00 3.56
4207 6913 2.369394 GAACTTCCCCGATTCTTGCAT 58.631 47.619 0.00 0.00 0.00 3.96
4213 6919 2.747989 GTTTCTGGAACTTCCCCGATTC 59.252 50.000 5.30 0.00 35.03 2.52
4214 6920 2.107552 TGTTTCTGGAACTTCCCCGATT 59.892 45.455 5.30 0.00 39.08 3.34
4215 6921 1.702957 TGTTTCTGGAACTTCCCCGAT 59.297 47.619 5.30 0.00 39.08 4.18
4216 6922 1.133363 TGTTTCTGGAACTTCCCCGA 58.867 50.000 5.30 0.00 39.08 5.14
4217 6923 1.975660 TTGTTTCTGGAACTTCCCCG 58.024 50.000 5.30 0.00 39.08 5.73
4218 6924 3.496331 TGATTGTTTCTGGAACTTCCCC 58.504 45.455 5.30 0.00 39.08 4.81
4221 6927 5.613358 ACGATGATTGTTTCTGGAACTTC 57.387 39.130 0.00 0.00 39.08 3.01
4222 6928 6.231211 ACTACGATGATTGTTTCTGGAACTT 58.769 36.000 0.00 0.00 39.08 2.66
4223 6929 5.794894 ACTACGATGATTGTTTCTGGAACT 58.205 37.500 0.00 0.00 39.08 3.01
4225 6931 7.201609 GCATAACTACGATGATTGTTTCTGGAA 60.202 37.037 0.00 0.00 0.00 3.53
4227 6933 6.258727 AGCATAACTACGATGATTGTTTCTGG 59.741 38.462 0.00 0.00 0.00 3.86
4228 6934 7.121911 CAGCATAACTACGATGATTGTTTCTG 58.878 38.462 0.00 0.00 0.00 3.02
4231 6937 5.220854 GGCAGCATAACTACGATGATTGTTT 60.221 40.000 0.00 0.00 0.00 2.83
4232 6938 4.273480 GGCAGCATAACTACGATGATTGTT 59.727 41.667 0.00 0.00 0.00 2.83
4233 6939 3.809832 GGCAGCATAACTACGATGATTGT 59.190 43.478 0.00 0.00 0.00 2.71
4236 6942 2.289694 GGGGCAGCATAACTACGATGAT 60.290 50.000 0.00 0.00 0.00 2.45
4237 6943 1.070134 GGGGCAGCATAACTACGATGA 59.930 52.381 0.00 0.00 0.00 2.92
4238 6944 1.202639 TGGGGCAGCATAACTACGATG 60.203 52.381 0.00 0.00 0.00 3.84
4240 6946 0.906066 TTGGGGCAGCATAACTACGA 59.094 50.000 0.00 0.00 0.00 3.43
4242 6948 2.880890 CTGATTGGGGCAGCATAACTAC 59.119 50.000 0.00 0.00 0.00 2.73
4244 6950 1.410648 CCTGATTGGGGCAGCATAACT 60.411 52.381 0.00 0.00 32.06 2.24
4276 6982 2.384828 ACCACCTTTTCAAGAACCACC 58.615 47.619 0.00 0.00 0.00 4.61
4296 7002 1.013596 CGCAAAGTCGCCAATGGATA 58.986 50.000 2.05 0.00 0.00 2.59
4319 7025 1.895131 TGGCAAAGCATTTCTTCTCCC 59.105 47.619 0.00 0.00 35.03 4.30
4415 7702 1.668419 CTTTCCTGCTTACATCCGGG 58.332 55.000 0.00 0.00 0.00 5.73
4448 7735 1.134098 AGGGAACAACATGCCTATCCG 60.134 52.381 0.00 0.00 39.68 4.18
4530 7818 8.693625 GGGTACAGTTATCACTTACTATCAGTT 58.306 37.037 0.00 0.00 0.00 3.16
4531 7819 8.060075 AGGGTACAGTTATCACTTACTATCAGT 58.940 37.037 0.00 0.00 0.00 3.41
4533 7821 7.837689 ACAGGGTACAGTTATCACTTACTATCA 59.162 37.037 0.00 0.00 0.00 2.15
4536 7824 7.177184 TCACAGGGTACAGTTATCACTTACTA 58.823 38.462 0.00 0.00 0.00 1.82
4603 7969 4.141688 CCATCCTGGTTTAGTCTAGAACCC 60.142 50.000 8.54 0.00 43.69 4.11
4643 8014 1.999648 ACTGCCATGCAAAAAGGAGA 58.000 45.000 0.00 0.00 38.41 3.71
4743 8276 7.255491 TGCTTGCATTATGTTAATCTCTCAG 57.745 36.000 0.00 0.00 0.00 3.35
4834 8383 0.395448 GCTACTACTCCTGGTCCGGT 60.395 60.000 0.00 0.00 0.00 5.28
4850 8399 7.072177 ACAAAACTATAGTACGTACGTGCTA 57.928 36.000 36.72 36.72 44.77 3.49
4876 8425 9.577110 GTGGTTTTACTGGCCTTTTATTTATAC 57.423 33.333 3.32 0.00 0.00 1.47
4879 8428 6.783482 AGGTGGTTTTACTGGCCTTTTATTTA 59.217 34.615 3.32 0.00 0.00 1.40
4884 8433 2.698274 CAGGTGGTTTTACTGGCCTTTT 59.302 45.455 3.32 0.00 0.00 2.27
4907 9795 1.131315 GTCCTCAGAAAAATCGCCAGC 59.869 52.381 0.00 0.00 0.00 4.85
4926 9814 7.072961 AGACCAGGAACATTATCAAGGATATGT 59.927 37.037 0.00 0.00 0.00 2.29
5006 9912 0.247419 GCACTCACGAATGACGCATG 60.247 55.000 0.00 0.00 46.94 4.06
5054 10522 4.904251 AGAGGTAATGCACTAGGTGATGAT 59.096 41.667 1.57 0.00 35.23 2.45
5119 10611 3.706086 TGTATGTAGCCAGCTCTTGATCA 59.294 43.478 0.00 0.00 0.00 2.92
5137 10629 4.225042 TGGCTAGATATGGCGGATTTGTAT 59.775 41.667 0.00 0.00 0.00 2.29
5146 10642 1.261480 AGAGGTGGCTAGATATGGCG 58.739 55.000 0.00 0.00 0.00 5.69
5164 10678 3.426615 CAGGAGGTCAGGCTATAGGTAG 58.573 54.545 1.04 0.00 0.00 3.18
5199 10721 2.124445 CCATGGCAGCTGCTAGCA 60.124 61.111 35.82 26.02 45.56 3.49
5332 10860 2.430332 GGAGAGACTATTGTGCTCTGCT 59.570 50.000 15.02 0.00 41.90 4.24
5530 17717 3.867857 TGGCGTGATTATTCTAGCACAA 58.132 40.909 0.00 0.00 0.00 3.33
5556 17743 2.202987 GCTCATGCCTGGGACTCG 60.203 66.667 0.00 0.00 0.00 4.18
5617 17855 4.139859 TGAACCCGACTTACTCAAAACA 57.860 40.909 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.