Multiple sequence alignment - TraesCS4D01G287600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G287600 chr4D 100.000 2480 0 0 1 2480 459256849 459254370 0.000000e+00 4580
1 TraesCS4D01G287600 chr2D 98.301 765 8 5 1 760 503581536 503580772 0.000000e+00 1336
2 TraesCS4D01G287600 chr3D 97.638 762 9 5 1 753 260971972 260972733 0.000000e+00 1299
3 TraesCS4D01G287600 chr7B 95.515 758 28 5 2 754 334800294 334799538 0.000000e+00 1206
4 TraesCS4D01G287600 chr7B 90.633 758 56 9 2 754 313775070 313774323 0.000000e+00 992
5 TraesCS4D01G287600 chr7B 90.132 608 48 6 158 754 407201825 407201219 0.000000e+00 780
6 TraesCS4D01G287600 chr6B 93.947 760 39 5 2 754 481265742 481264983 0.000000e+00 1142
7 TraesCS4D01G287600 chr4A 92.378 761 50 5 2 754 650309583 650308823 0.000000e+00 1077
8 TraesCS4D01G287600 chr4A 91.377 661 26 12 1115 1765 9555296 9555935 0.000000e+00 876
9 TraesCS4D01G287600 chr3B 92.084 758 54 5 3 754 771776466 771777223 0.000000e+00 1062
10 TraesCS4D01G287600 chr3B 84.151 265 37 4 503 763 771775781 771775518 4.090000e-63 252
11 TraesCS4D01G287600 chr5D 92.074 757 46 6 2 754 459061236 459061982 0.000000e+00 1053
12 TraesCS4D01G287600 chr4B 89.489 666 36 14 1111 1762 573403397 573402752 0.000000e+00 811
13 TraesCS4D01G287600 chr4B 81.153 451 65 12 1841 2274 573402378 573401931 6.570000e-91 344
14 TraesCS4D01G287600 chr4B 90.400 125 12 0 989 1113 573403616 573403492 5.490000e-37 165
15 TraesCS4D01G287600 chr7D 91.482 587 41 7 2 582 535746189 535746772 0.000000e+00 798
16 TraesCS4D01G287600 chr6A 81.618 136 20 4 2345 2475 159727786 159727921 9.380000e-20 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G287600 chr4D 459254370 459256849 2479 True 4580 4580 100.000 1 2480 1 chr4D.!!$R1 2479
1 TraesCS4D01G287600 chr2D 503580772 503581536 764 True 1336 1336 98.301 1 760 1 chr2D.!!$R1 759
2 TraesCS4D01G287600 chr3D 260971972 260972733 761 False 1299 1299 97.638 1 753 1 chr3D.!!$F1 752
3 TraesCS4D01G287600 chr7B 334799538 334800294 756 True 1206 1206 95.515 2 754 1 chr7B.!!$R2 752
4 TraesCS4D01G287600 chr7B 313774323 313775070 747 True 992 992 90.633 2 754 1 chr7B.!!$R1 752
5 TraesCS4D01G287600 chr7B 407201219 407201825 606 True 780 780 90.132 158 754 1 chr7B.!!$R3 596
6 TraesCS4D01G287600 chr6B 481264983 481265742 759 True 1142 1142 93.947 2 754 1 chr6B.!!$R1 752
7 TraesCS4D01G287600 chr4A 650308823 650309583 760 True 1077 1077 92.378 2 754 1 chr4A.!!$R1 752
8 TraesCS4D01G287600 chr4A 9555296 9555935 639 False 876 876 91.377 1115 1765 1 chr4A.!!$F1 650
9 TraesCS4D01G287600 chr3B 771776466 771777223 757 False 1062 1062 92.084 3 754 1 chr3B.!!$F1 751
10 TraesCS4D01G287600 chr5D 459061236 459061982 746 False 1053 1053 92.074 2 754 1 chr5D.!!$F1 752
11 TraesCS4D01G287600 chr4B 573401931 573403616 1685 True 440 811 87.014 989 2274 3 chr4B.!!$R1 1285
12 TraesCS4D01G287600 chr7D 535746189 535746772 583 False 798 798 91.482 2 582 1 chr7D.!!$F1 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 843 0.031585 TCCTCGTGTTCACTCGTTGG 59.968 55.0 1.72 5.84 34.81 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2371 2824 0.034767 ACGATAGACACCTCCGTCCA 60.035 55.0 0.0 0.0 36.52 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
399 404 3.506067 GGATGTCCGTGGTTTGAATTCTT 59.494 43.478 7.05 0.00 0.00 2.52
760 788 9.063615 ACCTGTAGTGTATTTAACTCCAAAAAG 57.936 33.333 0.00 0.00 0.00 2.27
761 789 9.280174 CCTGTAGTGTATTTAACTCCAAAAAGA 57.720 33.333 0.00 0.00 0.00 2.52
771 799 8.584063 TTTAACTCCAAAAAGAACTTACCACT 57.416 30.769 0.00 0.00 0.00 4.00
772 800 8.584063 TTAACTCCAAAAAGAACTTACCACTT 57.416 30.769 0.00 0.00 0.00 3.16
773 801 6.451064 ACTCCAAAAAGAACTTACCACTTG 57.549 37.500 0.00 0.00 0.00 3.16
774 802 6.184789 ACTCCAAAAAGAACTTACCACTTGA 58.815 36.000 0.00 0.00 0.00 3.02
775 803 6.095021 ACTCCAAAAAGAACTTACCACTTGAC 59.905 38.462 0.00 0.00 0.00 3.18
776 804 5.358725 TCCAAAAAGAACTTACCACTTGACC 59.641 40.000 0.00 0.00 0.00 4.02
777 805 5.126384 CCAAAAAGAACTTACCACTTGACCA 59.874 40.000 0.00 0.00 0.00 4.02
778 806 6.265577 CAAAAAGAACTTACCACTTGACCAG 58.734 40.000 0.00 0.00 0.00 4.00
779 807 3.127425 AGAACTTACCACTTGACCAGC 57.873 47.619 0.00 0.00 0.00 4.85
780 808 2.152016 GAACTTACCACTTGACCAGCC 58.848 52.381 0.00 0.00 0.00 4.85
781 809 1.136828 ACTTACCACTTGACCAGCCA 58.863 50.000 0.00 0.00 0.00 4.75
782 810 1.072331 ACTTACCACTTGACCAGCCAG 59.928 52.381 0.00 0.00 0.00 4.85
783 811 0.400213 TTACCACTTGACCAGCCAGG 59.600 55.000 0.00 0.00 45.67 4.45
784 812 1.488705 TACCACTTGACCAGCCAGGG 61.489 60.000 0.00 0.00 43.89 4.45
785 813 2.528818 CCACTTGACCAGCCAGGGA 61.529 63.158 0.00 0.00 43.89 4.20
786 814 1.302832 CACTTGACCAGCCAGGGAC 60.303 63.158 0.00 0.00 43.89 4.46
787 815 1.770110 ACTTGACCAGCCAGGGACA 60.770 57.895 0.00 0.00 43.89 4.02
788 816 1.302832 CTTGACCAGCCAGGGACAC 60.303 63.158 0.00 0.00 43.89 3.67
789 817 1.770110 TTGACCAGCCAGGGACACT 60.770 57.895 0.00 0.00 43.89 3.55
790 818 1.352622 TTGACCAGCCAGGGACACTT 61.353 55.000 0.00 0.00 43.89 3.16
791 819 0.472925 TGACCAGCCAGGGACACTTA 60.473 55.000 0.00 0.00 43.89 2.24
792 820 0.690762 GACCAGCCAGGGACACTTAA 59.309 55.000 0.00 0.00 43.89 1.85
793 821 1.073284 GACCAGCCAGGGACACTTAAA 59.927 52.381 0.00 0.00 43.89 1.52
794 822 1.497286 ACCAGCCAGGGACACTTAAAA 59.503 47.619 0.00 0.00 43.89 1.52
795 823 2.162681 CCAGCCAGGGACACTTAAAAG 58.837 52.381 0.00 0.00 0.00 2.27
796 824 2.489073 CCAGCCAGGGACACTTAAAAGT 60.489 50.000 0.00 0.00 40.60 2.66
797 825 2.814336 CAGCCAGGGACACTTAAAAGTC 59.186 50.000 0.00 0.00 37.08 3.01
806 834 5.326120 GACACTTAAAAGTCCTCGTGTTC 57.674 43.478 0.00 0.00 37.08 3.18
807 835 4.761975 ACACTTAAAAGTCCTCGTGTTCA 58.238 39.130 0.00 0.00 37.08 3.18
808 836 4.569564 ACACTTAAAAGTCCTCGTGTTCAC 59.430 41.667 0.00 0.00 37.08 3.18
809 837 4.809426 CACTTAAAAGTCCTCGTGTTCACT 59.191 41.667 1.53 0.00 37.08 3.41
810 838 5.048507 ACTTAAAAGTCCTCGTGTTCACTC 58.951 41.667 1.53 0.00 32.86 3.51
811 839 2.135664 AAAGTCCTCGTGTTCACTCG 57.864 50.000 1.53 0.00 0.00 4.18
812 840 1.030457 AAGTCCTCGTGTTCACTCGT 58.970 50.000 1.72 0.00 34.81 4.18
813 841 1.030457 AGTCCTCGTGTTCACTCGTT 58.970 50.000 1.72 0.00 34.81 3.85
814 842 1.129326 GTCCTCGTGTTCACTCGTTG 58.871 55.000 1.72 0.00 34.81 4.10
815 843 0.031585 TCCTCGTGTTCACTCGTTGG 59.968 55.000 1.72 5.84 34.81 3.77
816 844 0.249322 CCTCGTGTTCACTCGTTGGT 60.249 55.000 1.72 0.00 34.81 3.67
817 845 1.001048 CCTCGTGTTCACTCGTTGGTA 60.001 52.381 1.72 0.00 34.81 3.25
818 846 2.049228 CTCGTGTTCACTCGTTGGTAC 58.951 52.381 1.72 0.00 34.81 3.34
819 847 1.404748 TCGTGTTCACTCGTTGGTACA 59.595 47.619 0.00 0.00 34.81 2.90
820 848 2.034939 TCGTGTTCACTCGTTGGTACAT 59.965 45.455 0.00 0.00 39.30 2.29
821 849 3.252944 TCGTGTTCACTCGTTGGTACATA 59.747 43.478 0.00 0.00 39.30 2.29
822 850 4.082625 TCGTGTTCACTCGTTGGTACATAT 60.083 41.667 0.00 0.00 39.30 1.78
823 851 5.123661 TCGTGTTCACTCGTTGGTACATATA 59.876 40.000 0.00 0.00 39.30 0.86
824 852 5.228635 CGTGTTCACTCGTTGGTACATATAC 59.771 44.000 0.00 0.00 39.30 1.47
825 853 5.228635 GTGTTCACTCGTTGGTACATATACG 59.771 44.000 0.00 0.00 39.30 3.06
826 854 5.106197 TGTTCACTCGTTGGTACATATACGT 60.106 40.000 0.00 0.00 39.30 3.57
827 855 6.093357 TGTTCACTCGTTGGTACATATACGTA 59.907 38.462 0.00 0.00 39.30 3.57
828 856 6.291067 TCACTCGTTGGTACATATACGTAG 57.709 41.667 0.08 0.00 39.30 3.51
829 857 5.817296 TCACTCGTTGGTACATATACGTAGT 59.183 40.000 0.08 0.00 42.67 2.73
830 858 6.983890 TCACTCGTTGGTACATATACGTAGTA 59.016 38.462 0.08 0.00 44.63 1.82
831 859 7.042725 TCACTCGTTGGTACATATACGTAGTAC 60.043 40.741 12.74 12.74 43.45 2.73
832 860 6.074302 ACTCGTTGGTACATATACGTAGTACG 60.074 42.308 20.82 20.82 43.45 3.67
833 861 4.840772 CGTTGGTACATATACGTAGTACGC 59.159 45.833 22.23 3.54 43.45 4.42
834 862 5.333339 CGTTGGTACATATACGTAGTACGCT 60.333 44.000 22.23 12.44 43.45 5.07
835 863 6.074005 GTTGGTACATATACGTAGTACGCTC 58.926 44.000 22.23 4.49 43.45 5.03
836 864 5.179368 TTGGTACATATACGTAGTACGCTCC 59.821 44.000 22.23 12.52 43.45 4.70
837 865 6.964131 TTGGTACATATACGTAGTACGCTCCT 60.964 42.308 22.23 5.71 43.45 3.69
838 866 8.383524 TTGGTACATATACGTAGTACGCTCCTT 61.384 40.741 22.23 5.33 43.45 3.36
842 870 3.920144 CGTAGTACGCTCCTTCTGG 57.080 57.895 10.19 0.00 33.65 3.86
843 871 1.093159 CGTAGTACGCTCCTTCTGGT 58.907 55.000 10.19 0.00 33.65 4.00
844 872 1.471684 CGTAGTACGCTCCTTCTGGTT 59.528 52.381 10.19 0.00 33.65 3.67
845 873 2.679837 CGTAGTACGCTCCTTCTGGTTA 59.320 50.000 10.19 0.00 33.65 2.85
846 874 3.242673 CGTAGTACGCTCCTTCTGGTTAG 60.243 52.174 10.19 0.00 33.65 2.34
847 875 1.477295 AGTACGCTCCTTCTGGTTAGC 59.523 52.381 0.00 0.00 31.88 3.09
848 876 0.822164 TACGCTCCTTCTGGTTAGCC 59.178 55.000 0.00 0.00 31.60 3.93
849 877 1.192146 ACGCTCCTTCTGGTTAGCCA 61.192 55.000 0.00 0.00 43.73 4.75
850 878 0.179000 CGCTCCTTCTGGTTAGCCAT 59.821 55.000 0.00 0.00 45.05 4.40
851 879 1.407437 CGCTCCTTCTGGTTAGCCATT 60.407 52.381 0.00 0.00 45.05 3.16
852 880 2.728007 GCTCCTTCTGGTTAGCCATTT 58.272 47.619 0.00 0.00 45.05 2.32
853 881 3.092301 GCTCCTTCTGGTTAGCCATTTT 58.908 45.455 0.00 0.00 45.05 1.82
854 882 3.119352 GCTCCTTCTGGTTAGCCATTTTG 60.119 47.826 0.00 0.00 45.05 2.44
855 883 4.082125 CTCCTTCTGGTTAGCCATTTTGT 58.918 43.478 0.00 0.00 45.05 2.83
856 884 3.826157 TCCTTCTGGTTAGCCATTTTGTG 59.174 43.478 0.00 0.00 45.05 3.33
857 885 3.826157 CCTTCTGGTTAGCCATTTTGTGA 59.174 43.478 0.00 0.00 45.05 3.58
858 886 4.280677 CCTTCTGGTTAGCCATTTTGTGAA 59.719 41.667 0.00 0.00 45.05 3.18
859 887 5.221422 CCTTCTGGTTAGCCATTTTGTGAAA 60.221 40.000 0.00 0.00 45.05 2.69
860 888 5.860941 TCTGGTTAGCCATTTTGTGAAAA 57.139 34.783 0.00 0.00 45.05 2.29
861 889 5.596845 TCTGGTTAGCCATTTTGTGAAAAC 58.403 37.500 0.00 0.00 45.05 2.43
862 890 4.363999 TGGTTAGCCATTTTGTGAAAACG 58.636 39.130 0.00 0.00 40.46 3.60
863 891 4.142138 TGGTTAGCCATTTTGTGAAAACGT 60.142 37.500 0.00 0.00 40.46 3.99
864 892 4.208253 GGTTAGCCATTTTGTGAAAACGTG 59.792 41.667 0.00 0.00 32.37 4.49
865 893 2.200899 AGCCATTTTGTGAAAACGTGC 58.799 42.857 0.00 0.00 32.37 5.34
866 894 1.071568 GCCATTTTGTGAAAACGTGCG 60.072 47.619 0.00 0.00 32.37 5.34
867 895 2.189342 CCATTTTGTGAAAACGTGCGT 58.811 42.857 0.00 0.00 32.37 5.24
868 896 3.364062 CCATTTTGTGAAAACGTGCGTA 58.636 40.909 0.00 0.00 32.37 4.42
869 897 3.420576 CCATTTTGTGAAAACGTGCGTAG 59.579 43.478 0.00 0.00 32.37 3.51
870 898 2.741122 TTTGTGAAAACGTGCGTAGG 57.259 45.000 0.00 0.00 0.00 3.18
871 899 0.305313 TTGTGAAAACGTGCGTAGGC 59.695 50.000 0.00 0.00 40.52 3.93
872 900 1.205820 GTGAAAACGTGCGTAGGCC 59.794 57.895 4.72 0.00 38.85 5.19
873 901 1.962306 TGAAAACGTGCGTAGGCCC 60.962 57.895 0.00 0.00 38.85 5.80
874 902 1.962306 GAAAACGTGCGTAGGCCCA 60.962 57.895 0.00 0.00 38.85 5.36
875 903 1.302993 AAAACGTGCGTAGGCCCAT 60.303 52.632 0.00 0.00 38.85 4.00
876 904 1.582610 AAAACGTGCGTAGGCCCATG 61.583 55.000 0.00 0.00 38.85 3.66
878 906 4.838152 CGTGCGTAGGCCCATGCT 62.838 66.667 16.61 0.00 38.85 3.79
879 907 2.504032 GTGCGTAGGCCCATGCTA 59.496 61.111 16.61 0.39 38.85 3.49
880 908 1.071471 GTGCGTAGGCCCATGCTAT 59.929 57.895 16.61 0.00 38.85 2.97
881 909 0.320374 GTGCGTAGGCCCATGCTATA 59.680 55.000 16.61 0.00 38.85 1.31
882 910 1.052617 TGCGTAGGCCCATGCTATAA 58.947 50.000 16.61 0.00 38.85 0.98
883 911 1.418264 TGCGTAGGCCCATGCTATAAA 59.582 47.619 16.61 0.00 38.85 1.40
884 912 2.039746 TGCGTAGGCCCATGCTATAAAT 59.960 45.455 16.61 0.00 38.85 1.40
885 913 3.262151 TGCGTAGGCCCATGCTATAAATA 59.738 43.478 16.61 0.00 38.85 1.40
886 914 3.871594 GCGTAGGCCCATGCTATAAATAG 59.128 47.826 8.26 0.00 37.74 1.73
887 915 4.442706 CGTAGGCCCATGCTATAAATAGG 58.557 47.826 0.00 0.00 37.74 2.57
888 916 4.161565 CGTAGGCCCATGCTATAAATAGGA 59.838 45.833 0.00 0.00 37.74 2.94
889 917 4.576330 AGGCCCATGCTATAAATAGGAC 57.424 45.455 0.00 0.00 33.45 3.85
890 918 3.916349 AGGCCCATGCTATAAATAGGACA 59.084 43.478 0.00 0.00 33.45 4.02
891 919 4.010349 GGCCCATGCTATAAATAGGACAC 58.990 47.826 0.00 0.00 33.45 3.67
892 920 3.684788 GCCCATGCTATAAATAGGACACG 59.315 47.826 0.00 0.00 33.45 4.49
893 921 4.562757 GCCCATGCTATAAATAGGACACGA 60.563 45.833 0.00 0.00 33.45 4.35
894 922 5.171476 CCCATGCTATAAATAGGACACGAG 58.829 45.833 0.00 0.00 33.45 4.18
895 923 5.279506 CCCATGCTATAAATAGGACACGAGT 60.280 44.000 0.00 0.00 33.45 4.18
896 924 5.635280 CCATGCTATAAATAGGACACGAGTG 59.365 44.000 1.13 1.13 33.45 3.51
897 925 6.447162 CATGCTATAAATAGGACACGAGTGA 58.553 40.000 10.50 0.00 33.45 3.41
898 926 6.459670 TGCTATAAATAGGACACGAGTGAA 57.540 37.500 10.50 0.00 0.00 3.18
899 927 6.504398 TGCTATAAATAGGACACGAGTGAAG 58.496 40.000 10.50 0.00 0.00 3.02
900 928 6.096423 TGCTATAAATAGGACACGAGTGAAGT 59.904 38.462 10.50 0.00 0.00 3.01
901 929 6.418226 GCTATAAATAGGACACGAGTGAAGTG 59.582 42.308 10.50 0.00 44.57 3.16
902 930 4.866508 AAATAGGACACGAGTGAAGTGA 57.133 40.909 10.50 0.00 41.83 3.41
903 931 5.407407 AAATAGGACACGAGTGAAGTGAT 57.593 39.130 10.50 0.00 41.83 3.06
904 932 4.640789 ATAGGACACGAGTGAAGTGATC 57.359 45.455 10.50 0.00 41.83 2.92
905 933 2.520069 AGGACACGAGTGAAGTGATCT 58.480 47.619 10.50 0.00 41.83 2.75
906 934 2.894126 AGGACACGAGTGAAGTGATCTT 59.106 45.455 10.50 0.00 41.83 2.40
907 935 3.322254 AGGACACGAGTGAAGTGATCTTT 59.678 43.478 10.50 0.00 41.83 2.52
908 936 3.675698 GGACACGAGTGAAGTGATCTTTC 59.324 47.826 10.50 0.00 41.83 2.62
909 937 4.299155 GACACGAGTGAAGTGATCTTTCA 58.701 43.478 10.50 8.54 41.83 2.69
910 938 4.693283 ACACGAGTGAAGTGATCTTTCAA 58.307 39.130 10.50 0.00 41.83 2.69
911 939 5.116180 ACACGAGTGAAGTGATCTTTCAAA 58.884 37.500 10.50 0.00 41.83 2.69
912 940 5.006746 ACACGAGTGAAGTGATCTTTCAAAC 59.993 40.000 10.50 9.71 41.83 2.93
913 941 5.235186 CACGAGTGAAGTGATCTTTCAAACT 59.765 40.000 12.71 8.33 41.83 2.66
914 942 5.463724 ACGAGTGAAGTGATCTTTCAAACTC 59.536 40.000 12.71 13.67 33.64 3.01
915 943 5.107298 CGAGTGAAGTGATCTTTCAAACTCC 60.107 44.000 12.71 3.63 32.74 3.85
916 944 5.684704 AGTGAAGTGATCTTTCAAACTCCA 58.315 37.500 12.71 0.00 33.64 3.86
917 945 5.762218 AGTGAAGTGATCTTTCAAACTCCAG 59.238 40.000 12.71 0.00 33.64 3.86
918 946 4.516698 TGAAGTGATCTTTCAAACTCCAGC 59.483 41.667 9.77 0.00 33.64 4.85
919 947 4.090761 AGTGATCTTTCAAACTCCAGCA 57.909 40.909 0.00 0.00 32.48 4.41
920 948 3.817647 AGTGATCTTTCAAACTCCAGCAC 59.182 43.478 0.00 0.00 32.48 4.40
921 949 2.807967 TGATCTTTCAAACTCCAGCACG 59.192 45.455 0.00 0.00 0.00 5.34
922 950 2.325583 TCTTTCAAACTCCAGCACGT 57.674 45.000 0.00 0.00 0.00 4.49
923 951 2.210116 TCTTTCAAACTCCAGCACGTC 58.790 47.619 0.00 0.00 0.00 4.34
924 952 1.264288 CTTTCAAACTCCAGCACGTCC 59.736 52.381 0.00 0.00 0.00 4.79
925 953 0.534203 TTCAAACTCCAGCACGTCCC 60.534 55.000 0.00 0.00 0.00 4.46
926 954 2.030562 AAACTCCAGCACGTCCCG 59.969 61.111 0.00 0.00 0.00 5.14
927 955 2.803817 AAACTCCAGCACGTCCCGT 61.804 57.895 0.00 0.00 42.36 5.28
928 956 2.319890 AAACTCCAGCACGTCCCGTT 62.320 55.000 0.00 0.00 38.32 4.44
929 957 2.432628 CTCCAGCACGTCCCGTTC 60.433 66.667 0.00 0.00 38.32 3.95
930 958 2.915659 TCCAGCACGTCCCGTTCT 60.916 61.111 0.00 0.00 38.32 3.01
931 959 1.592400 CTCCAGCACGTCCCGTTCTA 61.592 60.000 0.00 0.00 38.32 2.10
932 960 1.153823 CCAGCACGTCCCGTTCTAG 60.154 63.158 0.00 0.00 38.32 2.43
933 961 1.805945 CAGCACGTCCCGTTCTAGC 60.806 63.158 0.00 0.00 38.32 3.42
934 962 2.508663 GCACGTCCCGTTCTAGCC 60.509 66.667 0.00 0.00 38.32 3.93
935 963 3.003113 GCACGTCCCGTTCTAGCCT 62.003 63.158 0.00 0.00 38.32 4.58
936 964 1.139095 CACGTCCCGTTCTAGCCTC 59.861 63.158 0.00 0.00 38.32 4.70
937 965 1.001145 ACGTCCCGTTCTAGCCTCT 60.001 57.895 0.00 0.00 36.35 3.69
938 966 1.031029 ACGTCCCGTTCTAGCCTCTC 61.031 60.000 0.00 0.00 36.35 3.20
939 967 0.748729 CGTCCCGTTCTAGCCTCTCT 60.749 60.000 0.00 0.00 0.00 3.10
940 968 1.476477 GTCCCGTTCTAGCCTCTCTT 58.524 55.000 0.00 0.00 0.00 2.85
941 969 1.826096 GTCCCGTTCTAGCCTCTCTTT 59.174 52.381 0.00 0.00 0.00 2.52
942 970 2.234168 GTCCCGTTCTAGCCTCTCTTTT 59.766 50.000 0.00 0.00 0.00 2.27
943 971 2.496470 TCCCGTTCTAGCCTCTCTTTTC 59.504 50.000 0.00 0.00 0.00 2.29
944 972 2.498078 CCCGTTCTAGCCTCTCTTTTCT 59.502 50.000 0.00 0.00 0.00 2.52
945 973 3.700038 CCCGTTCTAGCCTCTCTTTTCTA 59.300 47.826 0.00 0.00 0.00 2.10
946 974 4.202070 CCCGTTCTAGCCTCTCTTTTCTAG 60.202 50.000 0.00 0.00 0.00 2.43
947 975 4.356289 CGTTCTAGCCTCTCTTTTCTAGC 58.644 47.826 0.00 0.00 0.00 3.42
948 976 4.097286 CGTTCTAGCCTCTCTTTTCTAGCT 59.903 45.833 0.00 0.00 0.00 3.32
949 977 5.588240 GTTCTAGCCTCTCTTTTCTAGCTC 58.412 45.833 0.00 0.00 0.00 4.09
950 978 4.861196 TCTAGCCTCTCTTTTCTAGCTCA 58.139 43.478 0.00 0.00 0.00 4.26
951 979 5.265191 TCTAGCCTCTCTTTTCTAGCTCAA 58.735 41.667 0.00 0.00 0.00 3.02
952 980 4.470334 AGCCTCTCTTTTCTAGCTCAAG 57.530 45.455 0.00 0.00 0.00 3.02
953 981 2.935849 GCCTCTCTTTTCTAGCTCAAGC 59.064 50.000 0.00 0.00 42.49 4.01
979 1007 4.154347 GCGCTCTAGCCAGCCAGT 62.154 66.667 0.00 0.00 35.84 4.00
980 1008 2.202851 CGCTCTAGCCAGCCAGTG 60.203 66.667 0.00 0.00 35.84 3.66
981 1009 2.985456 GCTCTAGCCAGCCAGTGT 59.015 61.111 0.00 0.00 32.76 3.55
982 1010 1.449246 GCTCTAGCCAGCCAGTGTG 60.449 63.158 0.00 0.00 32.76 3.82
983 1011 1.978473 CTCTAGCCAGCCAGTGTGT 59.022 57.895 0.00 0.00 0.00 3.72
984 1012 1.186200 CTCTAGCCAGCCAGTGTGTA 58.814 55.000 0.00 0.00 0.00 2.90
985 1013 1.759445 CTCTAGCCAGCCAGTGTGTAT 59.241 52.381 0.00 0.00 0.00 2.29
986 1014 1.757118 TCTAGCCAGCCAGTGTGTATC 59.243 52.381 0.00 0.00 0.00 2.24
987 1015 0.830648 TAGCCAGCCAGTGTGTATCC 59.169 55.000 0.00 0.00 0.00 2.59
996 1024 3.304794 GCCAGTGTGTATCCTACTCGATC 60.305 52.174 0.00 0.00 0.00 3.69
1009 1037 3.032609 CGATCGACATGAGGCCGC 61.033 66.667 10.26 0.00 0.00 6.53
1011 1039 4.592192 ATCGACATGAGGCCGCCG 62.592 66.667 3.22 0.00 0.00 6.46
1041 1069 2.517402 CTCCCGCTCCTACTCGCT 60.517 66.667 0.00 0.00 0.00 4.93
1048 1076 1.682740 GCTCCTACTCGCTACCTTCT 58.317 55.000 0.00 0.00 0.00 2.85
1113 1141 2.313317 CCAACCCTAGCTACGTATCCA 58.687 52.381 0.00 0.00 0.00 3.41
1123 1250 1.955080 CTACGTATCCACCTCCACCTC 59.045 57.143 0.00 0.00 0.00 3.85
1124 1251 0.686769 ACGTATCCACCTCCACCTCC 60.687 60.000 0.00 0.00 0.00 4.30
1125 1252 0.686441 CGTATCCACCTCCACCTCCA 60.686 60.000 0.00 0.00 0.00 3.86
1318 1445 0.037605 GGTAGACCTGGTGTTCGTGG 60.038 60.000 2.82 0.00 0.00 4.94
1496 1623 6.153680 CCAAAGTAAGGCTCGAGGATATATCT 59.846 42.308 15.58 0.00 0.00 1.98
1497 1624 7.339721 CCAAAGTAAGGCTCGAGGATATATCTA 59.660 40.741 15.58 0.00 0.00 1.98
1498 1625 8.908903 CAAAGTAAGGCTCGAGGATATATCTAT 58.091 37.037 15.58 2.00 0.00 1.98
1499 1626 8.685838 AAGTAAGGCTCGAGGATATATCTATC 57.314 38.462 15.58 9.79 34.18 2.08
1508 1635 5.294552 CGAGGATATATCTATCGTGCACTCA 59.705 44.000 22.19 0.95 35.53 3.41
1604 1737 5.579511 GCATCAGAATGTTTGGAGAATTTGG 59.420 40.000 0.00 0.00 37.40 3.28
1630 1763 5.982516 TGTAACTGATCAATTGTTGTTTGGC 59.017 36.000 5.13 2.96 0.00 4.52
1650 1783 2.164624 GCTGTTCGTGTCTAGTCCTCAT 59.835 50.000 0.00 0.00 0.00 2.90
1651 1784 3.732471 GCTGTTCGTGTCTAGTCCTCATC 60.732 52.174 0.00 0.00 0.00 2.92
1667 1800 6.268847 AGTCCTCATCTTATCCATACTCAACC 59.731 42.308 0.00 0.00 0.00 3.77
1672 1805 3.386726 TCTTATCCATACTCAACCCACCG 59.613 47.826 0.00 0.00 0.00 4.94
1684 1826 0.753262 ACCCACCGTCTATCATGCTC 59.247 55.000 0.00 0.00 0.00 4.26
1685 1827 0.319040 CCCACCGTCTATCATGCTCG 60.319 60.000 0.00 0.00 0.00 5.03
1723 1865 6.920569 ATCGTGTCTGTTTTACAACTCTTT 57.079 33.333 0.00 0.00 33.58 2.52
1725 1867 7.136289 TCGTGTCTGTTTTACAACTCTTTTT 57.864 32.000 0.00 0.00 33.58 1.94
1726 1868 7.018826 TCGTGTCTGTTTTACAACTCTTTTTG 58.981 34.615 0.00 0.00 33.58 2.44
1729 1871 8.974408 GTGTCTGTTTTACAACTCTTTTTGTTT 58.026 29.630 0.00 0.00 40.29 2.83
1730 1872 8.973378 TGTCTGTTTTACAACTCTTTTTGTTTG 58.027 29.630 0.00 0.00 40.29 2.93
1731 1873 8.974408 GTCTGTTTTACAACTCTTTTTGTTTGT 58.026 29.630 0.00 0.00 40.29 2.83
1732 1874 8.973378 TCTGTTTTACAACTCTTTTTGTTTGTG 58.027 29.630 0.00 0.00 40.29 3.33
1755 1898 6.586082 GTGTGTGTTTTTCTCATTTTGTCACT 59.414 34.615 0.00 0.00 0.00 3.41
1756 1899 7.753132 GTGTGTGTTTTTCTCATTTTGTCACTA 59.247 33.333 0.00 0.00 0.00 2.74
1771 1919 2.028112 GTCACTATGTGGGTGCTTCTCA 60.028 50.000 0.00 0.00 33.87 3.27
1772 1920 2.637382 TCACTATGTGGGTGCTTCTCAA 59.363 45.455 0.00 0.00 33.87 3.02
1773 1921 2.744202 CACTATGTGGGTGCTTCTCAAC 59.256 50.000 0.00 0.00 0.00 3.18
1774 1922 2.371841 ACTATGTGGGTGCTTCTCAACA 59.628 45.455 0.00 0.00 32.80 3.33
1776 1924 0.179020 TGTGGGTGCTTCTCAACAGG 60.179 55.000 0.00 0.00 32.80 4.00
1777 1925 0.179018 GTGGGTGCTTCTCAACAGGT 60.179 55.000 0.00 0.00 32.80 4.00
1778 1926 0.179020 TGGGTGCTTCTCAACAGGTG 60.179 55.000 0.00 0.00 32.80 4.00
1780 1928 1.476833 GGGTGCTTCTCAACAGGTGAA 60.477 52.381 0.00 0.00 35.22 3.18
1781 1929 2.297701 GGTGCTTCTCAACAGGTGAAA 58.702 47.619 0.00 0.00 35.22 2.69
1782 1930 2.291741 GGTGCTTCTCAACAGGTGAAAG 59.708 50.000 0.00 0.00 35.22 2.62
1783 1931 2.945668 GTGCTTCTCAACAGGTGAAAGT 59.054 45.455 10.33 0.00 35.22 2.66
1784 1932 4.127171 GTGCTTCTCAACAGGTGAAAGTA 58.873 43.478 10.33 5.25 35.22 2.24
1785 1933 4.212214 GTGCTTCTCAACAGGTGAAAGTAG 59.788 45.833 10.33 0.00 35.22 2.57
1787 1935 4.816925 GCTTCTCAACAGGTGAAAGTAGTT 59.183 41.667 10.33 0.00 35.22 2.24
1788 1936 5.989777 GCTTCTCAACAGGTGAAAGTAGTTA 59.010 40.000 10.33 0.00 35.22 2.24
1789 1937 6.146347 GCTTCTCAACAGGTGAAAGTAGTTAG 59.854 42.308 10.33 0.00 35.22 2.34
1790 1938 6.097915 TCTCAACAGGTGAAAGTAGTTAGG 57.902 41.667 0.00 0.00 35.22 2.69
1791 1939 5.836898 TCTCAACAGGTGAAAGTAGTTAGGA 59.163 40.000 0.00 0.00 35.22 2.94
1794 1942 6.099269 TCAACAGGTGAAAGTAGTTAGGACTT 59.901 38.462 0.00 0.00 38.81 3.01
1796 1944 6.990798 ACAGGTGAAAGTAGTTAGGACTTAC 58.009 40.000 0.00 0.00 36.10 2.34
1798 1946 5.483231 AGGTGAAAGTAGTTAGGACTTACCC 59.517 44.000 4.57 0.00 36.68 3.69
1799 1947 5.337894 GGTGAAAGTAGTTAGGACTTACCCC 60.338 48.000 0.00 0.00 36.10 4.95
1800 1948 4.779489 TGAAAGTAGTTAGGACTTACCCCC 59.221 45.833 0.00 0.00 36.10 5.40
1849 2287 2.503382 CCCGCCCTAGCTCTCTTCC 61.503 68.421 0.00 0.00 36.60 3.46
1853 2291 2.503382 CCCTAGCTCTCTTCCGCCC 61.503 68.421 0.00 0.00 0.00 6.13
1857 2295 0.617820 TAGCTCTCTTCCGCCCCTTT 60.618 55.000 0.00 0.00 0.00 3.11
1864 2302 2.821679 CTTCCGCCCCTTTCTCACCC 62.822 65.000 0.00 0.00 0.00 4.61
1907 2352 3.257933 GCGCAAAGCTGTAGCACT 58.742 55.556 0.30 0.00 45.16 4.40
1933 2378 4.437239 GGATCGGCACAATATGGATCTAG 58.563 47.826 0.00 0.00 0.00 2.43
1938 2383 3.944015 GGCACAATATGGATCTAGCCATC 59.056 47.826 2.40 0.00 45.36 3.51
1951 2397 1.412079 AGCCATCTCACTAGCCTCTG 58.588 55.000 0.00 0.00 0.00 3.35
1959 2405 3.888323 TCTCACTAGCCTCTGCATAGAAG 59.112 47.826 0.00 0.00 41.13 2.85
1960 2406 3.636300 CTCACTAGCCTCTGCATAGAAGT 59.364 47.826 0.00 0.00 41.13 3.01
1967 2413 2.288702 CCTCTGCATAGAAGTGATCCCG 60.289 54.545 0.00 0.00 31.21 5.14
1968 2414 2.625314 CTCTGCATAGAAGTGATCCCGA 59.375 50.000 0.00 0.00 31.21 5.14
1969 2415 3.234353 TCTGCATAGAAGTGATCCCGAT 58.766 45.455 0.00 0.00 0.00 4.18
1970 2416 3.006217 TCTGCATAGAAGTGATCCCGATG 59.994 47.826 0.00 0.00 0.00 3.84
1979 2425 4.819105 AGTGATCCCGATGACACTAAAA 57.181 40.909 0.00 0.00 40.96 1.52
1987 2433 4.084013 CCCGATGACACTAAAACTTCACAC 60.084 45.833 0.00 0.00 0.00 3.82
1996 2442 7.524065 ACACTAAAACTTCACACAACTAACAC 58.476 34.615 0.00 0.00 0.00 3.32
2004 2450 3.378742 TCACACAACTAACACGCCAAAAT 59.621 39.130 0.00 0.00 0.00 1.82
2011 2457 2.800516 ACACGCCAAAATGTGTCCA 58.199 47.368 0.00 0.00 45.74 4.02
2017 2463 2.094597 CGCCAAAATGTGTCCATCATGT 60.095 45.455 0.00 0.00 0.00 3.21
2041 2487 8.546644 TGTGGAACAGTTGATATCACAACACAA 61.547 37.037 4.48 0.00 45.67 3.33
2060 2506 8.973378 CAACACAAATAACAAAACATAATCCGT 58.027 29.630 0.00 0.00 0.00 4.69
2061 2507 9.535878 AACACAAATAACAAAACATAATCCGTT 57.464 25.926 0.00 0.00 0.00 4.44
2064 2510 9.535878 ACAAATAACAAAACATAATCCGTTTGT 57.464 25.926 0.00 0.00 36.71 2.83
2077 2523 0.523072 CGTTTGTGAGGCCTTCATGG 59.477 55.000 6.77 0.00 38.29 3.66
2079 2525 1.541588 GTTTGTGAGGCCTTCATGGTC 59.458 52.381 6.77 0.00 41.82 4.02
2096 2542 1.152419 TCGGTGAGGGAGTGGTTCA 60.152 57.895 0.00 0.00 0.00 3.18
2127 2573 0.531532 GATGCTCCGTCCTCACATGG 60.532 60.000 0.00 0.00 0.00 3.66
2137 2584 0.254178 CCTCACATGGTTCTCCCCTG 59.746 60.000 0.00 0.00 0.00 4.45
2141 2588 0.251341 ACATGGTTCTCCCCTGTTGC 60.251 55.000 0.00 0.00 0.00 4.17
2142 2589 0.251297 CATGGTTCTCCCCTGTTGCA 60.251 55.000 0.00 0.00 0.00 4.08
2143 2590 0.706433 ATGGTTCTCCCCTGTTGCAT 59.294 50.000 0.00 0.00 0.00 3.96
2145 2592 1.026718 GGTTCTCCCCTGTTGCATCG 61.027 60.000 0.00 0.00 0.00 3.84
2153 2600 1.541233 CCCTGTTGCATCGGTCCTATC 60.541 57.143 3.00 0.00 0.00 2.08
2156 2603 0.468226 GTTGCATCGGTCCTATCCCA 59.532 55.000 0.00 0.00 0.00 4.37
2160 2607 2.224523 TGCATCGGTCCTATCCCAATTC 60.225 50.000 0.00 0.00 0.00 2.17
2164 2611 1.768870 CGGTCCTATCCCAATTCTGGT 59.231 52.381 0.00 0.00 41.72 4.00
2165 2612 2.224305 CGGTCCTATCCCAATTCTGGTC 60.224 54.545 0.00 0.00 41.72 4.02
2171 2618 1.289160 TCCCAATTCTGGTCCTCCTG 58.711 55.000 0.00 0.00 41.72 3.86
2172 2619 0.394899 CCCAATTCTGGTCCTCCTGC 60.395 60.000 0.00 0.00 41.72 4.85
2192 2639 4.043100 TCGGAGGTCTCGGCTCCA 62.043 66.667 0.00 0.00 37.12 3.86
2197 2650 2.514824 GGTCTCGGCTCCAATGGC 60.515 66.667 0.00 0.00 0.00 4.40
2215 2668 2.182791 CACAGATGAGGCGTCGCT 59.817 61.111 18.11 2.78 0.00 4.93
2221 2674 2.564553 GATGAGGCGTCGCTCAGGTT 62.565 60.000 18.11 4.34 32.74 3.50
2223 2676 3.282745 GAGGCGTCGCTCAGGTTCA 62.283 63.158 18.11 0.00 0.00 3.18
2227 2680 1.660575 CGTCGCTCAGGTTCACGTT 60.661 57.895 0.00 0.00 0.00 3.99
2230 2683 1.594293 CGCTCAGGTTCACGTTGGT 60.594 57.895 0.00 0.00 0.00 3.67
2237 2690 1.652563 GTTCACGTTGGTCAAGGCC 59.347 57.895 0.00 0.00 0.00 5.19
2240 2693 1.227823 CACGTTGGTCAAGGCCAGA 60.228 57.895 5.01 0.00 40.01 3.86
2251 2704 1.621672 AAGGCCAGAGGTGCTCTAGC 61.622 60.000 5.01 0.00 42.76 3.42
2255 2708 1.435515 CAGAGGTGCTCTAGCCGTC 59.564 63.158 0.00 2.86 38.99 4.79
2256 2709 1.034838 CAGAGGTGCTCTAGCCGTCT 61.035 60.000 0.00 4.96 38.99 4.18
2258 2711 2.054140 GAGGTGCTCTAGCCGTCTCG 62.054 65.000 0.00 0.00 41.18 4.04
2260 2713 1.226435 GTGCTCTAGCCGTCTCGTG 60.226 63.158 0.00 0.00 41.18 4.35
2264 2717 2.023461 CTAGCCGTCTCGTGCTCG 59.977 66.667 0.81 0.81 35.69 5.03
2265 2718 2.435410 TAGCCGTCTCGTGCTCGA 60.435 61.111 10.80 10.80 44.12 4.04
2266 2719 1.777030 CTAGCCGTCTCGTGCTCGAT 61.777 60.000 11.75 0.00 45.21 3.59
2278 2731 4.907034 CTCGATGGCGGGTCGTCG 62.907 72.222 8.50 8.50 44.72 5.12
2280 2733 4.266070 CGATGGCGGGTCGTCGAT 62.266 66.667 9.13 0.00 45.81 3.59
2281 2734 2.900167 CGATGGCGGGTCGTCGATA 61.900 63.158 9.13 0.00 45.81 2.92
2282 2735 1.081376 GATGGCGGGTCGTCGATAG 60.081 63.158 0.00 0.00 32.50 2.08
2297 2750 4.012319 TCGATAGACGCTAAGTGTGTTC 57.988 45.455 0.00 0.00 42.67 3.18
2298 2751 3.106672 CGATAGACGCTAAGTGTGTTCC 58.893 50.000 0.00 0.00 39.84 3.62
2299 2752 3.445857 GATAGACGCTAAGTGTGTTCCC 58.554 50.000 0.00 0.00 39.84 3.97
2300 2753 1.045407 AGACGCTAAGTGTGTTCCCA 58.955 50.000 0.00 0.00 39.84 4.37
2301 2754 1.145803 GACGCTAAGTGTGTTCCCAC 58.854 55.000 0.00 0.00 39.84 4.61
2303 2756 1.270147 ACGCTAAGTGTGTTCCCACTC 60.270 52.381 0.00 0.00 44.74 3.51
2304 2757 1.429463 GCTAAGTGTGTTCCCACTCG 58.571 55.000 0.00 0.00 44.74 4.18
2305 2758 1.939838 GCTAAGTGTGTTCCCACTCGG 60.940 57.143 0.00 0.00 44.74 4.63
2306 2759 1.343465 CTAAGTGTGTTCCCACTCGGT 59.657 52.381 0.00 0.00 44.74 4.69
2307 2760 0.106149 AAGTGTGTTCCCACTCGGTC 59.894 55.000 0.00 0.00 44.74 4.79
2308 2761 0.759436 AGTGTGTTCCCACTCGGTCT 60.759 55.000 0.00 0.00 41.84 3.85
2309 2762 0.963962 GTGTGTTCCCACTCGGTCTA 59.036 55.000 0.00 0.00 42.34 2.59
2310 2763 1.342174 GTGTGTTCCCACTCGGTCTAA 59.658 52.381 0.00 0.00 42.34 2.10
2311 2764 2.040939 TGTGTTCCCACTCGGTCTAAA 58.959 47.619 0.00 0.00 42.34 1.85
2312 2765 2.224113 TGTGTTCCCACTCGGTCTAAAC 60.224 50.000 0.00 0.00 42.34 2.01
2313 2766 1.000060 TGTTCCCACTCGGTCTAAACG 60.000 52.381 0.00 0.00 0.00 3.60
2314 2767 0.604578 TTCCCACTCGGTCTAAACGG 59.395 55.000 0.00 0.00 0.00 4.44
2315 2768 1.217244 CCCACTCGGTCTAAACGGG 59.783 63.158 0.00 0.00 37.94 5.28
2316 2769 1.252904 CCCACTCGGTCTAAACGGGA 61.253 60.000 0.00 0.00 35.39 5.14
2317 2770 0.108945 CCACTCGGTCTAAACGGGAC 60.109 60.000 0.00 0.00 35.39 4.46
2318 2771 0.886563 CACTCGGTCTAAACGGGACT 59.113 55.000 0.00 0.00 35.39 3.85
2319 2772 2.086869 CACTCGGTCTAAACGGGACTA 58.913 52.381 0.00 0.00 35.39 2.59
2320 2773 2.097142 CACTCGGTCTAAACGGGACTAG 59.903 54.545 0.00 0.00 35.39 2.57
2321 2774 2.290577 ACTCGGTCTAAACGGGACTAGT 60.291 50.000 0.00 0.00 35.39 2.57
2322 2775 2.086869 TCGGTCTAAACGGGACTAGTG 58.913 52.381 0.00 0.00 34.47 2.74
2323 2776 1.815003 CGGTCTAAACGGGACTAGTGT 59.185 52.381 0.00 0.00 34.47 3.55
2324 2777 2.415090 CGGTCTAAACGGGACTAGTGTG 60.415 54.545 0.00 0.00 34.47 3.82
2325 2778 2.094338 GGTCTAAACGGGACTAGTGTGG 60.094 54.545 0.00 0.00 34.47 4.17
2326 2779 2.094338 GTCTAAACGGGACTAGTGTGGG 60.094 54.545 0.00 0.00 0.00 4.61
2327 2780 0.609662 TAAACGGGACTAGTGTGGGC 59.390 55.000 0.00 0.00 0.00 5.36
2328 2781 2.444700 AAACGGGACTAGTGTGGGCG 62.445 60.000 0.00 0.00 0.00 6.13
2329 2782 3.066190 CGGGACTAGTGTGGGCGA 61.066 66.667 0.00 0.00 0.00 5.54
2330 2783 2.577593 GGGACTAGTGTGGGCGAC 59.422 66.667 0.00 0.00 0.00 5.19
2331 2784 2.181021 GGACTAGTGTGGGCGACG 59.819 66.667 0.00 0.00 0.00 5.12
2332 2785 2.181021 GACTAGTGTGGGCGACGG 59.819 66.667 0.00 0.00 0.00 4.79
2333 2786 2.599578 ACTAGTGTGGGCGACGGT 60.600 61.111 0.00 0.00 0.00 4.83
2334 2787 2.126071 CTAGTGTGGGCGACGGTG 60.126 66.667 0.00 0.00 0.00 4.94
2335 2788 2.913578 TAGTGTGGGCGACGGTGT 60.914 61.111 0.00 0.00 0.00 4.16
2336 2789 3.215597 TAGTGTGGGCGACGGTGTG 62.216 63.158 0.00 0.00 0.00 3.82
2348 2801 4.736896 GGTGTGCCGTCGGGACTC 62.737 72.222 32.12 28.27 44.53 3.36
2357 2810 4.259952 TCGGGACTCGATGCTGAT 57.740 55.556 0.00 0.00 43.74 2.90
2358 2811 1.735973 TCGGGACTCGATGCTGATG 59.264 57.895 0.00 0.00 43.74 3.07
2359 2812 1.037579 TCGGGACTCGATGCTGATGT 61.038 55.000 0.00 0.00 43.74 3.06
2360 2813 0.596083 CGGGACTCGATGCTGATGTC 60.596 60.000 0.00 0.00 42.43 3.06
2361 2814 0.596083 GGGACTCGATGCTGATGTCG 60.596 60.000 0.00 0.00 39.11 4.35
2362 2815 0.101399 GGACTCGATGCTGATGTCGT 59.899 55.000 0.00 0.00 38.85 4.34
2363 2816 1.195347 GACTCGATGCTGATGTCGTG 58.805 55.000 0.00 0.00 38.85 4.35
2364 2817 0.803768 ACTCGATGCTGATGTCGTGC 60.804 55.000 0.00 0.00 38.85 5.34
2365 2818 1.485838 CTCGATGCTGATGTCGTGCC 61.486 60.000 0.00 0.00 38.85 5.01
2366 2819 1.810853 CGATGCTGATGTCGTGCCA 60.811 57.895 0.00 0.00 33.42 4.92
2367 2820 1.759293 CGATGCTGATGTCGTGCCAG 61.759 60.000 0.00 0.00 33.42 4.85
2368 2821 1.434622 GATGCTGATGTCGTGCCAGG 61.435 60.000 0.00 0.00 0.00 4.45
2369 2822 1.902765 ATGCTGATGTCGTGCCAGGA 61.903 55.000 0.00 0.00 33.00 3.86
2370 2823 1.812922 GCTGATGTCGTGCCAGGAG 60.813 63.158 0.00 0.00 0.00 3.69
2371 2824 1.593787 CTGATGTCGTGCCAGGAGT 59.406 57.895 0.00 0.00 0.00 3.85
2372 2825 0.738762 CTGATGTCGTGCCAGGAGTG 60.739 60.000 0.00 0.00 0.00 3.51
2382 2835 2.973899 CAGGAGTGGACGGAGGTG 59.026 66.667 0.00 0.00 0.00 4.00
2383 2836 1.908793 CAGGAGTGGACGGAGGTGT 60.909 63.158 0.00 0.00 0.00 4.16
2384 2837 1.606889 AGGAGTGGACGGAGGTGTC 60.607 63.158 0.00 0.00 38.17 3.67
2385 2838 1.606889 GGAGTGGACGGAGGTGTCT 60.607 63.158 0.00 0.00 38.91 3.41
2386 2839 0.323178 GGAGTGGACGGAGGTGTCTA 60.323 60.000 0.00 0.00 38.91 2.59
2387 2840 1.685491 GGAGTGGACGGAGGTGTCTAT 60.685 57.143 0.00 0.00 38.91 1.98
2388 2841 1.677052 GAGTGGACGGAGGTGTCTATC 59.323 57.143 0.00 0.00 38.91 2.08
2389 2842 0.381089 GTGGACGGAGGTGTCTATCG 59.619 60.000 0.00 0.00 38.91 2.92
2390 2843 0.034767 TGGACGGAGGTGTCTATCGT 60.035 55.000 0.00 0.00 38.91 3.73
2391 2844 0.662085 GGACGGAGGTGTCTATCGTC 59.338 60.000 0.00 0.00 43.02 4.20
2392 2845 1.666054 GACGGAGGTGTCTATCGTCT 58.334 55.000 0.00 0.00 41.80 4.18
2393 2846 1.598601 GACGGAGGTGTCTATCGTCTC 59.401 57.143 0.00 0.00 41.80 3.36
2394 2847 1.209990 ACGGAGGTGTCTATCGTCTCT 59.790 52.381 0.00 0.00 30.87 3.10
2395 2848 2.290464 CGGAGGTGTCTATCGTCTCTT 58.710 52.381 0.00 0.00 0.00 2.85
2396 2849 2.288458 CGGAGGTGTCTATCGTCTCTTC 59.712 54.545 0.00 0.00 0.00 2.87
2397 2850 2.619646 GGAGGTGTCTATCGTCTCTTCC 59.380 54.545 0.00 0.00 0.00 3.46
2398 2851 3.547746 GAGGTGTCTATCGTCTCTTCCT 58.452 50.000 0.00 0.00 0.00 3.36
2399 2852 4.444591 GGAGGTGTCTATCGTCTCTTCCTA 60.445 50.000 0.00 0.00 0.00 2.94
2400 2853 4.453751 AGGTGTCTATCGTCTCTTCCTAC 58.546 47.826 0.00 0.00 0.00 3.18
2401 2854 3.565063 GGTGTCTATCGTCTCTTCCTACC 59.435 52.174 0.00 0.00 0.00 3.18
2402 2855 4.197750 GTGTCTATCGTCTCTTCCTACCA 58.802 47.826 0.00 0.00 0.00 3.25
2403 2856 4.822896 GTGTCTATCGTCTCTTCCTACCAT 59.177 45.833 0.00 0.00 0.00 3.55
2404 2857 4.822350 TGTCTATCGTCTCTTCCTACCATG 59.178 45.833 0.00 0.00 0.00 3.66
2405 2858 4.216687 GTCTATCGTCTCTTCCTACCATGG 59.783 50.000 11.19 11.19 0.00 3.66
2406 2859 2.526888 TCGTCTCTTCCTACCATGGT 57.473 50.000 23.55 23.55 0.00 3.55
2407 2860 2.816411 TCGTCTCTTCCTACCATGGTT 58.184 47.619 25.38 7.42 0.00 3.67
2408 2861 2.496070 TCGTCTCTTCCTACCATGGTTG 59.504 50.000 25.38 21.39 0.00 3.77
2418 2871 3.955145 CCATGGTTGGTGAGCTACA 57.045 52.632 2.57 0.00 38.30 2.74
2419 2872 2.198827 CCATGGTTGGTGAGCTACAA 57.801 50.000 2.57 0.00 38.30 2.41
2420 2873 2.726821 CCATGGTTGGTGAGCTACAAT 58.273 47.619 2.57 0.00 38.30 2.71
2421 2874 2.424601 CCATGGTTGGTGAGCTACAATG 59.575 50.000 2.57 6.62 38.30 2.82
2422 2875 3.346315 CATGGTTGGTGAGCTACAATGA 58.654 45.455 7.66 0.00 0.00 2.57
2423 2876 3.719268 TGGTTGGTGAGCTACAATGAT 57.281 42.857 0.00 0.00 0.00 2.45
2424 2877 3.346315 TGGTTGGTGAGCTACAATGATG 58.654 45.455 0.00 0.00 0.00 3.07
2425 2878 3.008923 TGGTTGGTGAGCTACAATGATGA 59.991 43.478 0.00 0.00 0.00 2.92
2426 2879 4.202441 GGTTGGTGAGCTACAATGATGAT 58.798 43.478 0.00 0.00 0.00 2.45
2427 2880 4.036027 GGTTGGTGAGCTACAATGATGATG 59.964 45.833 0.00 0.00 0.00 3.07
2428 2881 3.812262 TGGTGAGCTACAATGATGATGG 58.188 45.455 0.00 0.00 0.00 3.51
2429 2882 3.200605 TGGTGAGCTACAATGATGATGGT 59.799 43.478 0.00 0.00 0.00 3.55
2430 2883 3.562973 GGTGAGCTACAATGATGATGGTG 59.437 47.826 0.00 0.00 0.00 4.17
2431 2884 3.562973 GTGAGCTACAATGATGATGGTGG 59.437 47.826 0.00 0.00 0.00 4.61
2432 2885 3.144506 GAGCTACAATGATGATGGTGGG 58.855 50.000 0.00 0.00 0.00 4.61
2433 2886 2.511218 AGCTACAATGATGATGGTGGGT 59.489 45.455 0.00 0.00 0.00 4.51
2434 2887 2.620115 GCTACAATGATGATGGTGGGTG 59.380 50.000 0.00 0.00 0.00 4.61
2435 2888 2.148446 ACAATGATGATGGTGGGTGG 57.852 50.000 0.00 0.00 0.00 4.61
2436 2889 1.640149 ACAATGATGATGGTGGGTGGA 59.360 47.619 0.00 0.00 0.00 4.02
2437 2890 2.042842 ACAATGATGATGGTGGGTGGAA 59.957 45.455 0.00 0.00 0.00 3.53
2438 2891 3.302161 CAATGATGATGGTGGGTGGAAT 58.698 45.455 0.00 0.00 0.00 3.01
2439 2892 3.693526 ATGATGATGGTGGGTGGAATT 57.306 42.857 0.00 0.00 0.00 2.17
2440 2893 3.471430 TGATGATGGTGGGTGGAATTT 57.529 42.857 0.00 0.00 0.00 1.82
2441 2894 3.788933 TGATGATGGTGGGTGGAATTTT 58.211 40.909 0.00 0.00 0.00 1.82
2442 2895 3.514706 TGATGATGGTGGGTGGAATTTTG 59.485 43.478 0.00 0.00 0.00 2.44
2443 2896 3.251016 TGATGGTGGGTGGAATTTTGA 57.749 42.857 0.00 0.00 0.00 2.69
2444 2897 3.164268 TGATGGTGGGTGGAATTTTGAG 58.836 45.455 0.00 0.00 0.00 3.02
2445 2898 3.181424 TGATGGTGGGTGGAATTTTGAGA 60.181 43.478 0.00 0.00 0.00 3.27
2446 2899 3.541242 TGGTGGGTGGAATTTTGAGAT 57.459 42.857 0.00 0.00 0.00 2.75
2447 2900 3.430453 TGGTGGGTGGAATTTTGAGATC 58.570 45.455 0.00 0.00 0.00 2.75
2448 2901 3.075882 TGGTGGGTGGAATTTTGAGATCT 59.924 43.478 0.00 0.00 0.00 2.75
2449 2902 4.089361 GGTGGGTGGAATTTTGAGATCTT 58.911 43.478 0.00 0.00 0.00 2.40
2450 2903 4.082026 GGTGGGTGGAATTTTGAGATCTTG 60.082 45.833 0.00 0.00 0.00 3.02
2451 2904 4.082026 GTGGGTGGAATTTTGAGATCTTGG 60.082 45.833 0.00 0.00 0.00 3.61
2452 2905 4.202663 TGGGTGGAATTTTGAGATCTTGGA 60.203 41.667 0.00 0.00 0.00 3.53
2453 2906 4.958581 GGGTGGAATTTTGAGATCTTGGAT 59.041 41.667 0.00 0.00 0.00 3.41
2454 2907 5.163478 GGGTGGAATTTTGAGATCTTGGATG 60.163 44.000 0.00 0.00 0.00 3.51
2455 2908 5.346522 GTGGAATTTTGAGATCTTGGATGC 58.653 41.667 0.00 0.00 0.00 3.91
2456 2909 4.403432 TGGAATTTTGAGATCTTGGATGCC 59.597 41.667 0.00 0.00 0.00 4.40
2457 2910 4.498682 GGAATTTTGAGATCTTGGATGCCG 60.499 45.833 0.00 0.00 0.00 5.69
2458 2911 2.042686 TTTGAGATCTTGGATGCCGG 57.957 50.000 0.00 0.00 0.00 6.13
2459 2912 0.181114 TTGAGATCTTGGATGCCGGG 59.819 55.000 2.18 0.00 0.00 5.73
2460 2913 1.072159 GAGATCTTGGATGCCGGGG 59.928 63.158 2.18 0.00 0.00 5.73
2461 2914 1.694169 AGATCTTGGATGCCGGGGT 60.694 57.895 2.18 0.00 0.00 4.95
2462 2915 1.526917 GATCTTGGATGCCGGGGTG 60.527 63.158 2.18 0.00 0.00 4.61
2463 2916 2.965716 GATCTTGGATGCCGGGGTGG 62.966 65.000 2.18 0.00 42.50 4.61
2464 2917 4.047125 CTTGGATGCCGGGGTGGT 62.047 66.667 2.18 0.00 41.21 4.16
2465 2918 4.358841 TTGGATGCCGGGGTGGTG 62.359 66.667 2.18 0.00 41.21 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
399 404 0.749649 AAACACAAGCCGGCATGAAA 59.250 45.000 36.16 0.00 0.00 2.69
754 782 6.202516 TGGTCAAGTGGTAAGTTCTTTTTG 57.797 37.500 0.00 0.00 0.00 2.44
760 788 2.152016 GGCTGGTCAAGTGGTAAGTTC 58.848 52.381 0.00 0.00 0.00 3.01
761 789 1.493022 TGGCTGGTCAAGTGGTAAGTT 59.507 47.619 0.00 0.00 0.00 2.66
762 790 1.072331 CTGGCTGGTCAAGTGGTAAGT 59.928 52.381 0.00 0.00 0.00 2.24
763 791 1.611673 CCTGGCTGGTCAAGTGGTAAG 60.612 57.143 1.62 0.00 0.00 2.34
764 792 0.400213 CCTGGCTGGTCAAGTGGTAA 59.600 55.000 1.62 0.00 0.00 2.85
765 793 1.488705 CCCTGGCTGGTCAAGTGGTA 61.489 60.000 9.73 0.00 0.00 3.25
766 794 2.833913 CCCTGGCTGGTCAAGTGGT 61.834 63.158 9.73 0.00 0.00 4.16
767 795 2.034687 CCCTGGCTGGTCAAGTGG 59.965 66.667 9.73 0.00 0.00 4.00
768 796 1.302832 GTCCCTGGCTGGTCAAGTG 60.303 63.158 9.73 0.00 0.00 3.16
769 797 1.770110 TGTCCCTGGCTGGTCAAGT 60.770 57.895 9.73 0.00 0.00 3.16
770 798 1.302832 GTGTCCCTGGCTGGTCAAG 60.303 63.158 9.73 0.00 0.00 3.02
771 799 1.352622 AAGTGTCCCTGGCTGGTCAA 61.353 55.000 9.73 0.00 0.00 3.18
772 800 0.472925 TAAGTGTCCCTGGCTGGTCA 60.473 55.000 9.73 5.66 0.00 4.02
773 801 0.690762 TTAAGTGTCCCTGGCTGGTC 59.309 55.000 9.73 3.14 0.00 4.02
774 802 1.145571 TTTAAGTGTCCCTGGCTGGT 58.854 50.000 9.73 0.00 0.00 4.00
775 803 2.162681 CTTTTAAGTGTCCCTGGCTGG 58.837 52.381 2.96 2.96 0.00 4.85
776 804 2.814336 GACTTTTAAGTGTCCCTGGCTG 59.186 50.000 0.00 0.00 39.88 4.85
777 805 2.224793 GGACTTTTAAGTGTCCCTGGCT 60.225 50.000 14.46 0.00 45.03 4.75
778 806 2.160205 GGACTTTTAAGTGTCCCTGGC 58.840 52.381 14.46 0.00 45.03 4.85
784 812 4.807304 TGAACACGAGGACTTTTAAGTGTC 59.193 41.667 0.00 2.48 41.26 3.67
785 813 4.569564 GTGAACACGAGGACTTTTAAGTGT 59.430 41.667 0.00 0.00 43.56 3.55
786 814 4.809426 AGTGAACACGAGGACTTTTAAGTG 59.191 41.667 0.00 0.00 36.43 3.16
787 815 5.019785 AGTGAACACGAGGACTTTTAAGT 57.980 39.130 0.00 0.00 38.01 2.24
788 816 4.148348 CGAGTGAACACGAGGACTTTTAAG 59.852 45.833 0.00 0.00 36.20 1.85
789 817 4.046462 CGAGTGAACACGAGGACTTTTAA 58.954 43.478 0.00 0.00 36.20 1.52
790 818 3.067180 ACGAGTGAACACGAGGACTTTTA 59.933 43.478 7.28 0.00 36.20 1.52
791 819 2.159142 ACGAGTGAACACGAGGACTTTT 60.159 45.455 7.28 0.00 36.20 2.27
792 820 1.407979 ACGAGTGAACACGAGGACTTT 59.592 47.619 7.28 0.00 36.20 2.66
793 821 1.030457 ACGAGTGAACACGAGGACTT 58.970 50.000 7.28 0.00 36.20 3.01
794 822 1.030457 AACGAGTGAACACGAGGACT 58.970 50.000 7.28 0.00 36.20 3.85
795 823 1.129326 CAACGAGTGAACACGAGGAC 58.871 55.000 7.28 0.00 36.20 3.85
796 824 0.031585 CCAACGAGTGAACACGAGGA 59.968 55.000 7.28 0.00 33.62 3.71
797 825 0.249322 ACCAACGAGTGAACACGAGG 60.249 55.000 7.28 10.16 35.95 4.63
798 826 2.049228 GTACCAACGAGTGAACACGAG 58.951 52.381 7.28 2.63 36.20 4.18
799 827 1.404748 TGTACCAACGAGTGAACACGA 59.595 47.619 7.28 0.00 36.20 4.35
800 828 1.842720 TGTACCAACGAGTGAACACG 58.157 50.000 0.00 0.00 36.20 4.49
801 829 5.228635 CGTATATGTACCAACGAGTGAACAC 59.771 44.000 0.00 0.00 37.53 3.32
802 830 5.106197 ACGTATATGTACCAACGAGTGAACA 60.106 40.000 11.68 0.00 38.64 3.18
803 831 5.335127 ACGTATATGTACCAACGAGTGAAC 58.665 41.667 11.68 0.00 38.64 3.18
804 832 5.565592 ACGTATATGTACCAACGAGTGAA 57.434 39.130 11.68 0.00 38.64 3.18
805 833 5.817296 ACTACGTATATGTACCAACGAGTGA 59.183 40.000 11.68 0.00 38.64 3.41
806 834 6.052840 ACTACGTATATGTACCAACGAGTG 57.947 41.667 11.68 0.00 38.64 3.51
807 835 6.074302 CGTACTACGTATATGTACCAACGAGT 60.074 42.308 16.69 9.90 38.64 4.18
808 836 6.292129 CGTACTACGTATATGTACCAACGAG 58.708 44.000 16.69 5.64 38.64 4.18
809 837 5.333035 GCGTACTACGTATATGTACCAACGA 60.333 44.000 21.67 0.00 44.73 3.85
810 838 4.840772 GCGTACTACGTATATGTACCAACG 59.159 45.833 14.49 17.04 44.73 4.10
811 839 5.990408 AGCGTACTACGTATATGTACCAAC 58.010 41.667 14.49 7.48 44.73 3.77
812 840 5.179368 GGAGCGTACTACGTATATGTACCAA 59.821 44.000 14.49 0.00 44.73 3.67
813 841 4.690748 GGAGCGTACTACGTATATGTACCA 59.309 45.833 14.49 0.00 44.73 3.25
814 842 4.932200 AGGAGCGTACTACGTATATGTACC 59.068 45.833 14.49 9.44 44.73 3.34
815 843 6.367422 AGAAGGAGCGTACTACGTATATGTAC 59.633 42.308 10.23 11.61 44.73 2.90
816 844 6.367149 CAGAAGGAGCGTACTACGTATATGTA 59.633 42.308 10.23 4.75 44.73 2.29
817 845 5.178996 CAGAAGGAGCGTACTACGTATATGT 59.821 44.000 10.23 2.56 44.73 2.29
818 846 5.390673 CCAGAAGGAGCGTACTACGTATATG 60.391 48.000 10.23 0.00 39.87 1.78
819 847 4.694509 CCAGAAGGAGCGTACTACGTATAT 59.305 45.833 10.23 0.00 39.87 0.86
820 848 4.060900 CCAGAAGGAGCGTACTACGTATA 58.939 47.826 10.23 0.00 39.87 1.47
821 849 2.877168 CCAGAAGGAGCGTACTACGTAT 59.123 50.000 10.23 0.00 39.87 3.06
822 850 2.283298 CCAGAAGGAGCGTACTACGTA 58.717 52.381 10.23 0.00 39.87 3.57
823 851 1.093159 CCAGAAGGAGCGTACTACGT 58.907 55.000 10.23 0.00 39.87 3.57
824 852 1.093159 ACCAGAAGGAGCGTACTACG 58.907 55.000 4.12 4.12 40.91 3.51
825 853 3.488890 GCTAACCAGAAGGAGCGTACTAC 60.489 52.174 0.00 0.00 38.69 2.73
826 854 2.686915 GCTAACCAGAAGGAGCGTACTA 59.313 50.000 0.00 0.00 38.69 1.82
827 855 1.477295 GCTAACCAGAAGGAGCGTACT 59.523 52.381 0.00 0.00 38.69 2.73
828 856 1.471153 GGCTAACCAGAAGGAGCGTAC 60.471 57.143 0.00 0.00 36.00 3.67
829 857 0.822164 GGCTAACCAGAAGGAGCGTA 59.178 55.000 0.00 0.00 36.00 4.42
830 858 1.192146 TGGCTAACCAGAAGGAGCGT 61.192 55.000 0.00 0.00 42.67 5.07
831 859 1.596934 TGGCTAACCAGAAGGAGCG 59.403 57.895 0.00 0.00 42.67 5.03
841 869 4.208253 CACGTTTTCACAAAATGGCTAACC 59.792 41.667 6.03 0.00 40.77 2.85
842 870 4.317769 GCACGTTTTCACAAAATGGCTAAC 60.318 41.667 6.03 0.00 40.77 2.34
843 871 3.799420 GCACGTTTTCACAAAATGGCTAA 59.201 39.130 6.03 0.00 40.77 3.09
844 872 3.376540 GCACGTTTTCACAAAATGGCTA 58.623 40.909 6.03 0.00 40.77 3.93
845 873 2.200899 GCACGTTTTCACAAAATGGCT 58.799 42.857 6.03 0.00 40.77 4.75
846 874 1.071568 CGCACGTTTTCACAAAATGGC 60.072 47.619 6.03 5.56 40.77 4.40
847 875 2.189342 ACGCACGTTTTCACAAAATGG 58.811 42.857 6.03 0.00 40.77 3.16
848 876 3.420576 CCTACGCACGTTTTCACAAAATG 59.579 43.478 0.00 0.35 41.89 2.32
849 877 3.623863 CCTACGCACGTTTTCACAAAAT 58.376 40.909 0.00 0.00 32.22 1.82
850 878 2.791849 GCCTACGCACGTTTTCACAAAA 60.792 45.455 0.00 0.00 34.03 2.44
851 879 1.268133 GCCTACGCACGTTTTCACAAA 60.268 47.619 0.00 0.00 34.03 2.83
852 880 0.305313 GCCTACGCACGTTTTCACAA 59.695 50.000 0.00 0.00 34.03 3.33
853 881 1.500512 GGCCTACGCACGTTTTCACA 61.501 55.000 0.00 0.00 36.38 3.58
854 882 1.205820 GGCCTACGCACGTTTTCAC 59.794 57.895 0.00 0.00 36.38 3.18
855 883 1.962306 GGGCCTACGCACGTTTTCA 60.962 57.895 0.84 0.00 36.38 2.69
856 884 1.303091 ATGGGCCTACGCACGTTTTC 61.303 55.000 4.53 0.00 43.51 2.29
857 885 1.302993 ATGGGCCTACGCACGTTTT 60.303 52.632 4.53 0.00 43.51 2.43
858 886 2.038269 CATGGGCCTACGCACGTTT 61.038 57.895 4.53 0.00 43.51 3.60
859 887 2.435938 CATGGGCCTACGCACGTT 60.436 61.111 4.53 0.00 43.51 3.99
861 889 2.715532 ATAGCATGGGCCTACGCACG 62.716 60.000 10.60 0.00 43.51 5.34
862 890 0.320374 TATAGCATGGGCCTACGCAC 59.680 55.000 10.60 0.00 42.14 5.34
863 891 1.052617 TTATAGCATGGGCCTACGCA 58.947 50.000 10.60 0.00 42.56 5.24
864 892 2.178912 TTTATAGCATGGGCCTACGC 57.821 50.000 0.00 0.00 42.56 4.42
865 893 4.161565 TCCTATTTATAGCATGGGCCTACG 59.838 45.833 4.53 0.00 42.56 3.51
866 894 5.045869 TGTCCTATTTATAGCATGGGCCTAC 60.046 44.000 4.53 0.00 42.56 3.18
867 895 5.045869 GTGTCCTATTTATAGCATGGGCCTA 60.046 44.000 4.53 0.00 42.56 3.93
868 896 3.916349 TGTCCTATTTATAGCATGGGCCT 59.084 43.478 4.53 0.00 42.56 5.19
869 897 4.010349 GTGTCCTATTTATAGCATGGGCC 58.990 47.826 0.00 0.00 42.56 5.80
870 898 3.684788 CGTGTCCTATTTATAGCATGGGC 59.315 47.826 0.00 0.00 41.61 5.36
871 899 5.147330 TCGTGTCCTATTTATAGCATGGG 57.853 43.478 0.00 0.00 0.00 4.00
872 900 5.635280 CACTCGTGTCCTATTTATAGCATGG 59.365 44.000 0.00 0.00 0.00 3.66
873 901 6.447162 TCACTCGTGTCCTATTTATAGCATG 58.553 40.000 0.00 0.00 0.00 4.06
874 902 6.650427 TCACTCGTGTCCTATTTATAGCAT 57.350 37.500 0.00 0.00 0.00 3.79
875 903 6.096423 ACTTCACTCGTGTCCTATTTATAGCA 59.904 38.462 0.00 0.00 0.00 3.49
876 904 6.418226 CACTTCACTCGTGTCCTATTTATAGC 59.582 42.308 0.00 0.00 0.00 2.97
877 905 7.704271 TCACTTCACTCGTGTCCTATTTATAG 58.296 38.462 0.00 0.00 34.14 1.31
878 906 7.634671 TCACTTCACTCGTGTCCTATTTATA 57.365 36.000 0.00 0.00 34.14 0.98
879 907 6.525578 TCACTTCACTCGTGTCCTATTTAT 57.474 37.500 0.00 0.00 34.14 1.40
880 908 5.970317 TCACTTCACTCGTGTCCTATTTA 57.030 39.130 0.00 0.00 34.14 1.40
881 909 4.866508 TCACTTCACTCGTGTCCTATTT 57.133 40.909 0.00 0.00 34.14 1.40
882 910 4.707448 AGATCACTTCACTCGTGTCCTATT 59.293 41.667 0.00 0.00 34.14 1.73
883 911 4.274147 AGATCACTTCACTCGTGTCCTAT 58.726 43.478 0.00 0.00 34.14 2.57
884 912 3.687125 AGATCACTTCACTCGTGTCCTA 58.313 45.455 0.00 0.00 34.14 2.94
885 913 2.520069 AGATCACTTCACTCGTGTCCT 58.480 47.619 0.00 0.00 34.14 3.85
886 914 3.305398 AAGATCACTTCACTCGTGTCC 57.695 47.619 0.00 0.00 34.14 4.02
887 915 4.299155 TGAAAGATCACTTCACTCGTGTC 58.701 43.478 6.24 0.00 35.05 3.67
888 916 4.322080 TGAAAGATCACTTCACTCGTGT 57.678 40.909 6.24 0.00 35.05 4.49
889 917 5.235186 AGTTTGAAAGATCACTTCACTCGTG 59.765 40.000 9.17 0.00 34.61 4.35
890 918 5.360591 AGTTTGAAAGATCACTTCACTCGT 58.639 37.500 9.17 0.00 34.61 4.18
891 919 5.107298 GGAGTTTGAAAGATCACTTCACTCG 60.107 44.000 9.17 0.00 34.61 4.18
892 920 5.760253 TGGAGTTTGAAAGATCACTTCACTC 59.240 40.000 9.17 12.01 34.61 3.51
893 921 5.684704 TGGAGTTTGAAAGATCACTTCACT 58.315 37.500 9.17 5.46 34.61 3.41
894 922 5.561725 GCTGGAGTTTGAAAGATCACTTCAC 60.562 44.000 9.17 1.48 34.61 3.18
895 923 4.516698 GCTGGAGTTTGAAAGATCACTTCA 59.483 41.667 6.24 6.24 34.61 3.02
896 924 4.516698 TGCTGGAGTTTGAAAGATCACTTC 59.483 41.667 0.00 0.00 34.61 3.01
897 925 4.276926 GTGCTGGAGTTTGAAAGATCACTT 59.723 41.667 0.00 0.00 34.61 3.16
898 926 3.817647 GTGCTGGAGTTTGAAAGATCACT 59.182 43.478 0.00 0.00 34.61 3.41
899 927 3.364366 CGTGCTGGAGTTTGAAAGATCAC 60.364 47.826 0.00 0.00 34.61 3.06
900 928 2.807967 CGTGCTGGAGTTTGAAAGATCA 59.192 45.455 0.00 0.00 0.00 2.92
901 929 2.808543 ACGTGCTGGAGTTTGAAAGATC 59.191 45.455 0.00 0.00 0.00 2.75
902 930 2.808543 GACGTGCTGGAGTTTGAAAGAT 59.191 45.455 0.00 0.00 0.00 2.40
903 931 2.210116 GACGTGCTGGAGTTTGAAAGA 58.790 47.619 0.00 0.00 0.00 2.52
904 932 1.264288 GGACGTGCTGGAGTTTGAAAG 59.736 52.381 0.00 0.00 0.00 2.62
905 933 1.305201 GGACGTGCTGGAGTTTGAAA 58.695 50.000 0.00 0.00 0.00 2.69
906 934 0.534203 GGGACGTGCTGGAGTTTGAA 60.534 55.000 7.11 0.00 0.00 2.69
907 935 1.070786 GGGACGTGCTGGAGTTTGA 59.929 57.895 7.11 0.00 0.00 2.69
908 936 3.655481 GGGACGTGCTGGAGTTTG 58.345 61.111 7.11 0.00 0.00 2.93
921 949 1.476477 AAGAGAGGCTAGAACGGGAC 58.524 55.000 0.00 0.00 0.00 4.46
922 950 2.233305 AAAGAGAGGCTAGAACGGGA 57.767 50.000 0.00 0.00 0.00 5.14
923 951 2.498078 AGAAAAGAGAGGCTAGAACGGG 59.502 50.000 0.00 0.00 0.00 5.28
924 952 3.878160 AGAAAAGAGAGGCTAGAACGG 57.122 47.619 0.00 0.00 0.00 4.44
925 953 4.097286 AGCTAGAAAAGAGAGGCTAGAACG 59.903 45.833 0.00 0.00 33.81 3.95
926 954 5.126384 TGAGCTAGAAAAGAGAGGCTAGAAC 59.874 44.000 0.00 0.00 33.81 3.01
927 955 5.265191 TGAGCTAGAAAAGAGAGGCTAGAA 58.735 41.667 0.00 0.00 33.81 2.10
928 956 4.861196 TGAGCTAGAAAAGAGAGGCTAGA 58.139 43.478 0.00 0.00 33.81 2.43
929 957 5.590530 TTGAGCTAGAAAAGAGAGGCTAG 57.409 43.478 0.00 0.00 34.80 3.42
930 958 4.142049 GCTTGAGCTAGAAAAGAGAGGCTA 60.142 45.833 0.00 0.00 38.21 3.93
931 959 3.369366 GCTTGAGCTAGAAAAGAGAGGCT 60.369 47.826 0.00 0.00 38.21 4.58
932 960 2.935849 GCTTGAGCTAGAAAAGAGAGGC 59.064 50.000 0.00 0.00 38.21 4.70
962 990 4.154347 ACTGGCTGGCTAGAGCGC 62.154 66.667 12.65 0.00 43.26 5.92
963 991 2.202851 CACTGGCTGGCTAGAGCG 60.203 66.667 12.65 0.00 43.26 5.03
964 992 1.449246 CACACTGGCTGGCTAGAGC 60.449 63.158 12.65 0.00 38.34 4.09
965 993 1.186200 TACACACTGGCTGGCTAGAG 58.814 55.000 12.65 7.33 0.00 2.43
966 994 1.757118 GATACACACTGGCTGGCTAGA 59.243 52.381 12.65 0.00 0.00 2.43
967 995 1.202580 GGATACACACTGGCTGGCTAG 60.203 57.143 2.00 4.44 0.00 3.42
968 996 0.830648 GGATACACACTGGCTGGCTA 59.169 55.000 2.00 0.00 0.00 3.93
969 997 0.911525 AGGATACACACTGGCTGGCT 60.912 55.000 2.00 0.00 41.41 4.75
970 998 0.830648 TAGGATACACACTGGCTGGC 59.169 55.000 0.00 0.00 41.41 4.85
971 999 2.101582 GAGTAGGATACACACTGGCTGG 59.898 54.545 0.00 0.00 46.26 4.85
972 1000 2.223595 CGAGTAGGATACACACTGGCTG 60.224 54.545 0.00 0.00 46.26 4.85
973 1001 2.025155 CGAGTAGGATACACACTGGCT 58.975 52.381 0.00 0.00 46.26 4.75
974 1002 2.022195 TCGAGTAGGATACACACTGGC 58.978 52.381 0.00 0.00 46.26 4.85
975 1003 3.058846 CGATCGAGTAGGATACACACTGG 60.059 52.174 10.26 0.00 46.26 4.00
976 1004 3.808174 TCGATCGAGTAGGATACACACTG 59.192 47.826 15.15 0.00 46.26 3.66
977 1005 3.808726 GTCGATCGAGTAGGATACACACT 59.191 47.826 20.09 0.00 46.26 3.55
978 1006 3.558829 TGTCGATCGAGTAGGATACACAC 59.441 47.826 20.09 2.79 46.26 3.82
979 1007 3.800531 TGTCGATCGAGTAGGATACACA 58.199 45.455 20.09 6.45 46.26 3.72
980 1008 4.451435 TCATGTCGATCGAGTAGGATACAC 59.549 45.833 20.09 3.57 46.26 2.90
981 1009 4.638304 TCATGTCGATCGAGTAGGATACA 58.362 43.478 20.09 11.26 46.26 2.29
982 1010 4.093703 CCTCATGTCGATCGAGTAGGATAC 59.906 50.000 20.09 5.15 43.47 2.24
983 1011 4.254492 CCTCATGTCGATCGAGTAGGATA 58.746 47.826 20.09 0.00 0.00 2.59
984 1012 3.078097 CCTCATGTCGATCGAGTAGGAT 58.922 50.000 20.09 2.98 0.00 3.24
985 1013 2.495084 CCTCATGTCGATCGAGTAGGA 58.505 52.381 20.09 16.14 0.00 2.94
986 1014 1.068885 GCCTCATGTCGATCGAGTAGG 60.069 57.143 20.09 21.20 0.00 3.18
987 1015 1.068885 GGCCTCATGTCGATCGAGTAG 60.069 57.143 20.09 12.76 0.00 2.57
1009 1037 2.498726 GAGGAGCAGAGGAAGCGG 59.501 66.667 0.00 0.00 37.01 5.52
1011 1039 2.907236 GGGAGGAGCAGAGGAAGC 59.093 66.667 0.00 0.00 0.00 3.86
1014 1042 4.067512 AGCGGGAGGAGCAGAGGA 62.068 66.667 0.00 0.00 37.01 3.71
1016 1044 2.632602 TAGGAGCGGGAGGAGCAGAG 62.633 65.000 0.00 0.00 37.01 3.35
1018 1046 2.123683 TAGGAGCGGGAGGAGCAG 60.124 66.667 0.00 0.00 37.01 4.24
1020 1048 2.123640 AGTAGGAGCGGGAGGAGC 60.124 66.667 0.00 0.00 0.00 4.70
1041 1069 0.393808 GGGCGATGGCAAAGAAGGTA 60.394 55.000 1.01 0.00 42.47 3.08
1085 1113 2.125673 CTAGGGTTGGTGACGGCG 60.126 66.667 4.80 4.80 0.00 6.46
1097 1125 2.161030 GAGGTGGATACGTAGCTAGGG 58.839 57.143 17.23 4.41 42.51 3.53
1113 1141 2.529389 GGTGGTGGAGGTGGAGGT 60.529 66.667 0.00 0.00 0.00 3.85
1160 1287 4.148825 ACGCCTGCGGTGGAGATC 62.149 66.667 16.63 0.00 44.69 2.75
1186 1313 3.682292 GAGATGGTGGCGGGGACAC 62.682 68.421 0.00 0.00 41.56 3.67
1187 1314 3.399181 GAGATGGTGGCGGGGACA 61.399 66.667 0.00 0.00 0.00 4.02
1523 1656 1.676635 AGCCGCACATTCATGCACT 60.677 52.632 0.00 0.00 46.47 4.40
1604 1737 6.420604 CCAAACAACAATTGATCAGTTACACC 59.579 38.462 13.59 0.00 0.00 4.16
1630 1763 3.692101 AGATGAGGACTAGACACGAACAG 59.308 47.826 0.00 0.00 0.00 3.16
1650 1783 3.386726 CGGTGGGTTGAGTATGGATAAGA 59.613 47.826 0.00 0.00 0.00 2.10
1651 1784 3.134081 ACGGTGGGTTGAGTATGGATAAG 59.866 47.826 0.00 0.00 0.00 1.73
1667 1800 0.941463 GCGAGCATGATAGACGGTGG 60.941 60.000 0.00 0.00 0.00 4.61
1672 1805 1.265635 ACTCTCGCGAGCATGATAGAC 59.734 52.381 30.97 0.00 41.09 2.59
1684 1826 2.276540 CACGATTGAGTTAACTCTCGCG 59.723 50.000 31.36 29.12 41.47 5.87
1685 1827 3.243336 ACACGATTGAGTTAACTCTCGC 58.757 45.455 31.36 21.28 41.47 5.03
1723 1865 7.721286 AATGAGAAAAACACACACAAACAAA 57.279 28.000 0.00 0.00 0.00 2.83
1725 1867 7.225538 ACAAAATGAGAAAAACACACACAAACA 59.774 29.630 0.00 0.00 0.00 2.83
1726 1868 7.571892 ACAAAATGAGAAAAACACACACAAAC 58.428 30.769 0.00 0.00 0.00 2.93
1729 1871 6.364706 GTGACAAAATGAGAAAAACACACACA 59.635 34.615 0.00 0.00 0.00 3.72
1730 1872 6.586082 AGTGACAAAATGAGAAAAACACACAC 59.414 34.615 0.00 0.00 0.00 3.82
1731 1873 6.686630 AGTGACAAAATGAGAAAAACACACA 58.313 32.000 0.00 0.00 0.00 3.72
1732 1874 8.745837 CATAGTGACAAAATGAGAAAAACACAC 58.254 33.333 0.00 0.00 0.00 3.82
1755 1898 2.290260 CCTGTTGAGAAGCACCCACATA 60.290 50.000 0.00 0.00 0.00 2.29
1756 1899 1.546323 CCTGTTGAGAAGCACCCACAT 60.546 52.381 0.00 0.00 0.00 3.21
1771 1919 6.496144 AAGTCCTAACTACTTTCACCTGTT 57.504 37.500 0.00 0.00 33.39 3.16
1772 1920 6.014755 GGTAAGTCCTAACTACTTTCACCTGT 60.015 42.308 0.00 0.00 38.18 4.00
1773 1921 6.396450 GGTAAGTCCTAACTACTTTCACCTG 58.604 44.000 0.00 0.00 38.18 4.00
1774 1922 5.483231 GGGTAAGTCCTAACTACTTTCACCT 59.517 44.000 0.00 0.00 38.18 4.00
1776 1924 5.337894 GGGGGTAAGTCCTAACTACTTTCAC 60.338 48.000 0.00 0.00 38.18 3.18
1777 1925 4.779489 GGGGGTAAGTCCTAACTACTTTCA 59.221 45.833 0.00 0.00 38.18 2.69
1778 1926 5.350504 GGGGGTAAGTCCTAACTACTTTC 57.649 47.826 0.00 0.00 38.18 2.62
1830 1978 3.157949 AAGAGAGCTAGGGCGGGC 61.158 66.667 0.00 0.00 44.37 6.13
1831 1979 2.503382 GGAAGAGAGCTAGGGCGGG 61.503 68.421 0.00 0.00 44.37 6.13
1832 1980 2.851071 CGGAAGAGAGCTAGGGCGG 61.851 68.421 0.00 0.00 44.37 6.13
1833 1981 2.725008 CGGAAGAGAGCTAGGGCG 59.275 66.667 0.00 0.00 44.37 6.13
1834 1982 2.419620 GCGGAAGAGAGCTAGGGC 59.580 66.667 0.00 0.00 39.06 5.19
1835 1983 2.503382 GGGCGGAAGAGAGCTAGGG 61.503 68.421 0.00 0.00 0.00 3.53
1836 1984 2.503382 GGGGCGGAAGAGAGCTAGG 61.503 68.421 0.00 0.00 0.00 3.02
1837 1985 1.045911 AAGGGGCGGAAGAGAGCTAG 61.046 60.000 0.00 0.00 0.00 3.42
1838 1986 0.617820 AAAGGGGCGGAAGAGAGCTA 60.618 55.000 0.00 0.00 0.00 3.32
1839 1987 1.904990 GAAAGGGGCGGAAGAGAGCT 61.905 60.000 0.00 0.00 0.00 4.09
1846 2284 2.754375 GGTGAGAAAGGGGCGGAA 59.246 61.111 0.00 0.00 0.00 4.30
1853 2291 4.778143 CGGGGCGGGTGAGAAAGG 62.778 72.222 0.00 0.00 0.00 3.11
1891 2336 1.790387 GGAGTGCTACAGCTTTGCG 59.210 57.895 2.44 0.00 42.66 4.85
1917 2362 4.841422 AGATGGCTAGATCCATATTGTGC 58.159 43.478 2.18 0.00 46.29 4.57
1933 2378 0.249826 GCAGAGGCTAGTGAGATGGC 60.250 60.000 0.56 0.00 36.96 4.40
1938 2383 3.636300 ACTTCTATGCAGAGGCTAGTGAG 59.364 47.826 8.78 2.92 41.91 3.51
1951 2397 3.243873 TGTCATCGGGATCACTTCTATGC 60.244 47.826 0.00 0.00 0.00 3.14
1959 2405 4.504858 AGTTTTAGTGTCATCGGGATCAC 58.495 43.478 0.00 0.00 0.00 3.06
1960 2406 4.819105 AGTTTTAGTGTCATCGGGATCA 57.181 40.909 0.00 0.00 0.00 2.92
1967 2413 7.016361 AGTTGTGTGAAGTTTTAGTGTCATC 57.984 36.000 0.00 0.00 0.00 2.92
1968 2414 8.395633 GTTAGTTGTGTGAAGTTTTAGTGTCAT 58.604 33.333 0.00 0.00 0.00 3.06
1969 2415 7.388224 TGTTAGTTGTGTGAAGTTTTAGTGTCA 59.612 33.333 0.00 0.00 0.00 3.58
1970 2416 7.691050 GTGTTAGTTGTGTGAAGTTTTAGTGTC 59.309 37.037 0.00 0.00 0.00 3.67
1979 2425 1.937899 GGCGTGTTAGTTGTGTGAAGT 59.062 47.619 0.00 0.00 0.00 3.01
1987 2433 3.701241 ACACATTTTGGCGTGTTAGTTG 58.299 40.909 0.00 0.00 43.71 3.16
1996 2442 2.094597 ACATGATGGACACATTTTGGCG 60.095 45.455 0.00 0.00 37.47 5.69
2010 2456 6.316890 TGTGATATCAACTGTTCCACATGATG 59.683 38.462 7.07 0.00 32.13 3.07
2011 2457 6.417258 TGTGATATCAACTGTTCCACATGAT 58.583 36.000 7.07 0.00 33.73 2.45
2017 2463 5.372373 TGTGTTGTGATATCAACTGTTCCA 58.628 37.500 7.07 0.00 45.26 3.53
2041 2487 9.405587 CTCACAAACGGATTATGTTTTGTTATT 57.594 29.630 0.00 0.00 37.44 1.40
2044 2490 6.212955 CCTCACAAACGGATTATGTTTTGTT 58.787 36.000 0.00 0.00 37.44 2.83
2053 2499 2.039216 TGAAGGCCTCACAAACGGATTA 59.961 45.455 5.23 0.00 0.00 1.75
2054 2500 1.202879 TGAAGGCCTCACAAACGGATT 60.203 47.619 5.23 0.00 0.00 3.01
2058 2504 0.523072 CCATGAAGGCCTCACAAACG 59.477 55.000 5.23 3.33 36.69 3.60
2060 2506 1.881925 CGACCATGAAGGCCTCACAAA 60.882 52.381 5.23 0.00 43.14 2.83
2061 2507 0.321564 CGACCATGAAGGCCTCACAA 60.322 55.000 5.23 0.00 43.14 3.33
2064 2510 1.918293 ACCGACCATGAAGGCCTCA 60.918 57.895 5.23 6.53 43.14 3.86
2077 2523 1.292541 GAACCACTCCCTCACCGAC 59.707 63.158 0.00 0.00 0.00 4.79
2079 2525 0.108138 GATGAACCACTCCCTCACCG 60.108 60.000 0.00 0.00 0.00 4.94
2080 2526 0.108138 CGATGAACCACTCCCTCACC 60.108 60.000 0.00 0.00 0.00 4.02
2096 2542 2.300152 ACGGAGCATCACCATTATCGAT 59.700 45.455 2.16 2.16 36.25 3.59
2127 2573 1.026718 CCGATGCAACAGGGGAGAAC 61.027 60.000 0.00 0.00 0.00 3.01
2137 2584 0.468226 TGGGATAGGACCGATGCAAC 59.532 55.000 8.31 0.00 0.00 4.17
2141 2588 3.557898 CCAGAATTGGGATAGGACCGATG 60.558 52.174 0.00 0.00 41.05 3.84
2142 2589 2.639839 CCAGAATTGGGATAGGACCGAT 59.360 50.000 0.00 0.00 41.05 4.18
2143 2590 2.047061 CCAGAATTGGGATAGGACCGA 58.953 52.381 0.00 0.00 41.05 4.69
2156 2603 1.201429 ACGGCAGGAGGACCAGAATT 61.201 55.000 0.00 0.00 38.94 2.17
2160 2607 4.135153 CGACGGCAGGAGGACCAG 62.135 72.222 0.00 0.00 38.94 4.00
2178 2625 1.144936 CCATTGGAGCCGAGACCTC 59.855 63.158 0.00 0.00 0.00 3.85
2192 2639 4.672251 GCCTCATCTGTGGCCATT 57.328 55.556 9.72 0.00 46.01 3.16
2197 2650 2.887568 GCGACGCCTCATCTGTGG 60.888 66.667 9.14 0.00 0.00 4.17
2200 2653 1.588403 CTGAGCGACGCCTCATCTG 60.588 63.158 17.79 7.72 40.77 2.90
2209 2662 1.660575 AACGTGAACCTGAGCGACG 60.661 57.895 0.00 0.00 36.14 5.12
2215 2668 1.474320 CCTTGACCAACGTGAACCTGA 60.474 52.381 0.00 0.00 0.00 3.86
2221 2674 1.227823 CTGGCCTTGACCAACGTGA 60.228 57.895 3.32 0.00 39.86 4.35
2223 2676 1.071471 CTCTGGCCTTGACCAACGT 59.929 57.895 3.32 0.00 39.86 3.99
2227 2680 3.160585 CACCTCTGGCCTTGACCA 58.839 61.111 3.32 0.00 38.29 4.02
2230 2683 0.252239 TAGAGCACCTCTGGCCTTGA 60.252 55.000 3.32 0.99 41.37 3.02
2237 2690 1.034838 AGACGGCTAGAGCACCTCTG 61.035 60.000 3.54 0.00 41.37 3.35
2240 2693 2.115911 CGAGACGGCTAGAGCACCT 61.116 63.158 0.00 0.00 44.36 4.00
2264 2717 1.081376 CTATCGACGACCCGCCATC 60.081 63.158 0.00 0.00 0.00 3.51
2265 2718 1.527611 TCTATCGACGACCCGCCAT 60.528 57.895 0.00 0.00 0.00 4.40
2266 2719 2.124612 TCTATCGACGACCCGCCA 60.125 61.111 0.00 0.00 0.00 5.69
2275 2728 3.402058 ACACACTTAGCGTCTATCGAC 57.598 47.619 0.00 0.00 42.86 4.20
2276 2729 3.181503 GGAACACACTTAGCGTCTATCGA 60.182 47.826 0.00 0.00 42.86 3.59
2277 2730 3.106672 GGAACACACTTAGCGTCTATCG 58.893 50.000 0.00 0.00 43.12 2.92
2278 2731 3.119245 TGGGAACACACTTAGCGTCTATC 60.119 47.826 0.00 0.00 33.40 2.08
2279 2732 2.829720 TGGGAACACACTTAGCGTCTAT 59.170 45.455 0.00 0.00 33.40 1.98
2280 2733 2.241160 TGGGAACACACTTAGCGTCTA 58.759 47.619 0.00 0.00 33.40 2.59
2281 2734 1.045407 TGGGAACACACTTAGCGTCT 58.955 50.000 0.00 0.00 33.40 4.18
2282 2735 3.599412 TGGGAACACACTTAGCGTC 57.401 52.632 0.00 0.00 33.40 5.19
2293 2746 1.000060 CGTTTAGACCGAGTGGGAACA 60.000 52.381 0.00 0.00 40.75 3.18
2294 2747 1.670967 CCGTTTAGACCGAGTGGGAAC 60.671 57.143 0.00 0.00 40.75 3.62
2295 2748 0.604578 CCGTTTAGACCGAGTGGGAA 59.395 55.000 0.00 0.00 40.75 3.97
2296 2749 1.252904 CCCGTTTAGACCGAGTGGGA 61.253 60.000 0.00 0.00 40.75 4.37
2297 2750 1.217244 CCCGTTTAGACCGAGTGGG 59.783 63.158 0.00 0.00 40.75 4.61
2298 2751 0.108945 GTCCCGTTTAGACCGAGTGG 60.109 60.000 0.00 0.00 42.84 4.00
2299 2752 0.886563 AGTCCCGTTTAGACCGAGTG 59.113 55.000 0.00 0.00 34.67 3.51
2300 2753 2.290577 ACTAGTCCCGTTTAGACCGAGT 60.291 50.000 0.00 0.00 34.67 4.18
2301 2754 2.097142 CACTAGTCCCGTTTAGACCGAG 59.903 54.545 0.00 0.00 34.67 4.63
2302 2755 2.086869 CACTAGTCCCGTTTAGACCGA 58.913 52.381 0.00 0.00 34.67 4.69
2303 2756 1.815003 ACACTAGTCCCGTTTAGACCG 59.185 52.381 0.00 0.00 34.67 4.79
2304 2757 2.094338 CCACACTAGTCCCGTTTAGACC 60.094 54.545 0.00 0.00 34.67 3.85
2305 2758 2.094338 CCCACACTAGTCCCGTTTAGAC 60.094 54.545 0.00 0.00 34.31 2.59
2306 2759 2.173519 CCCACACTAGTCCCGTTTAGA 58.826 52.381 0.00 0.00 0.00 2.10
2307 2760 1.405121 GCCCACACTAGTCCCGTTTAG 60.405 57.143 0.00 0.00 0.00 1.85
2308 2761 0.609662 GCCCACACTAGTCCCGTTTA 59.390 55.000 0.00 0.00 0.00 2.01
2309 2762 1.373812 GCCCACACTAGTCCCGTTT 59.626 57.895 0.00 0.00 0.00 3.60
2310 2763 2.939261 CGCCCACACTAGTCCCGTT 61.939 63.158 0.00 0.00 0.00 4.44
2311 2764 3.379445 CGCCCACACTAGTCCCGT 61.379 66.667 0.00 0.00 0.00 5.28
2312 2765 3.066190 TCGCCCACACTAGTCCCG 61.066 66.667 0.00 0.00 0.00 5.14
2313 2766 2.577593 GTCGCCCACACTAGTCCC 59.422 66.667 0.00 0.00 0.00 4.46
2314 2767 2.181021 CGTCGCCCACACTAGTCC 59.819 66.667 0.00 0.00 0.00 3.85
2315 2768 2.181021 CCGTCGCCCACACTAGTC 59.819 66.667 0.00 0.00 0.00 2.59
2316 2769 2.599578 ACCGTCGCCCACACTAGT 60.600 61.111 0.00 0.00 0.00 2.57
2317 2770 2.126071 CACCGTCGCCCACACTAG 60.126 66.667 0.00 0.00 0.00 2.57
2318 2771 2.913578 ACACCGTCGCCCACACTA 60.914 61.111 0.00 0.00 0.00 2.74
2319 2772 4.602259 CACACCGTCGCCCACACT 62.602 66.667 0.00 0.00 0.00 3.55
2331 2784 4.736896 GAGTCCCGACGGCACACC 62.737 72.222 11.26 0.00 36.20 4.16
2341 2794 0.596083 GACATCAGCATCGAGTCCCG 60.596 60.000 0.00 0.00 40.25 5.14
2342 2795 0.596083 CGACATCAGCATCGAGTCCC 60.596 60.000 0.00 0.00 40.86 4.46
2343 2796 0.101399 ACGACATCAGCATCGAGTCC 59.899 55.000 0.00 0.00 40.86 3.85
2344 2797 1.195347 CACGACATCAGCATCGAGTC 58.805 55.000 0.00 0.00 40.86 3.36
2345 2798 0.803768 GCACGACATCAGCATCGAGT 60.804 55.000 0.00 0.00 40.86 4.18
2346 2799 1.485838 GGCACGACATCAGCATCGAG 61.486 60.000 0.00 0.00 40.86 4.04
2347 2800 1.519234 GGCACGACATCAGCATCGA 60.519 57.895 0.00 0.00 40.86 3.59
2348 2801 1.759293 CTGGCACGACATCAGCATCG 61.759 60.000 0.00 0.00 43.97 3.84
2349 2802 1.434622 CCTGGCACGACATCAGCATC 61.435 60.000 0.00 0.00 0.00 3.91
2350 2803 1.450848 CCTGGCACGACATCAGCAT 60.451 57.895 0.00 0.00 0.00 3.79
2351 2804 2.046988 CCTGGCACGACATCAGCA 60.047 61.111 0.00 0.00 0.00 4.41
2352 2805 1.812922 CTCCTGGCACGACATCAGC 60.813 63.158 0.00 0.00 0.00 4.26
2353 2806 0.738762 CACTCCTGGCACGACATCAG 60.739 60.000 0.00 0.00 0.00 2.90
2354 2807 1.293179 CACTCCTGGCACGACATCA 59.707 57.895 0.00 0.00 0.00 3.07
2355 2808 1.448540 CCACTCCTGGCACGACATC 60.449 63.158 0.00 0.00 0.00 3.06
2356 2809 1.913262 TCCACTCCTGGCACGACAT 60.913 57.895 0.00 0.00 37.49 3.06
2357 2810 2.523168 TCCACTCCTGGCACGACA 60.523 61.111 0.00 0.00 37.49 4.35
2358 2811 2.048127 GTCCACTCCTGGCACGAC 60.048 66.667 0.00 0.00 37.49 4.34
2359 2812 3.680786 CGTCCACTCCTGGCACGA 61.681 66.667 0.00 0.00 37.49 4.35
2360 2813 4.742201 CCGTCCACTCCTGGCACG 62.742 72.222 0.00 0.00 37.49 5.34
2361 2814 3.302347 CTCCGTCCACTCCTGGCAC 62.302 68.421 0.00 0.00 37.49 5.01
2362 2815 2.997315 CTCCGTCCACTCCTGGCA 60.997 66.667 0.00 0.00 37.49 4.92
2363 2816 3.775654 CCTCCGTCCACTCCTGGC 61.776 72.222 0.00 0.00 37.49 4.85
2364 2817 2.283966 ACCTCCGTCCACTCCTGG 60.284 66.667 0.00 0.00 39.23 4.45
2365 2818 1.878656 GACACCTCCGTCCACTCCTG 61.879 65.000 0.00 0.00 0.00 3.86
2366 2819 1.606889 GACACCTCCGTCCACTCCT 60.607 63.158 0.00 0.00 0.00 3.69
2367 2820 0.323178 TAGACACCTCCGTCCACTCC 60.323 60.000 0.00 0.00 36.52 3.85
2368 2821 1.677052 GATAGACACCTCCGTCCACTC 59.323 57.143 0.00 0.00 36.52 3.51
2369 2822 1.765230 GATAGACACCTCCGTCCACT 58.235 55.000 0.00 0.00 36.52 4.00
2370 2823 0.381089 CGATAGACACCTCCGTCCAC 59.619 60.000 0.00 0.00 36.52 4.02
2371 2824 0.034767 ACGATAGACACCTCCGTCCA 60.035 55.000 0.00 0.00 36.52 4.02
2372 2825 0.662085 GACGATAGACACCTCCGTCC 59.338 60.000 0.00 0.00 40.00 4.79
2373 2826 1.598601 GAGACGATAGACACCTCCGTC 59.401 57.143 0.00 0.00 43.06 4.79
2374 2827 1.209990 AGAGACGATAGACACCTCCGT 59.790 52.381 0.00 0.00 41.38 4.69
2375 2828 1.956297 AGAGACGATAGACACCTCCG 58.044 55.000 0.00 0.00 41.38 4.63
2376 2829 2.619646 GGAAGAGACGATAGACACCTCC 59.380 54.545 0.00 0.00 41.38 4.30
2377 2830 3.547746 AGGAAGAGACGATAGACACCTC 58.452 50.000 0.00 0.00 41.38 3.85
2378 2831 3.655615 AGGAAGAGACGATAGACACCT 57.344 47.619 0.00 0.00 41.38 4.00
2379 2832 3.565063 GGTAGGAAGAGACGATAGACACC 59.435 52.174 0.00 0.00 41.38 4.16
2380 2833 4.197750 TGGTAGGAAGAGACGATAGACAC 58.802 47.826 0.00 0.00 41.38 3.67
2381 2834 4.498894 TGGTAGGAAGAGACGATAGACA 57.501 45.455 0.00 0.00 41.38 3.41
2382 2835 4.216687 CCATGGTAGGAAGAGACGATAGAC 59.783 50.000 2.57 0.00 41.38 2.59
2383 2836 4.141228 ACCATGGTAGGAAGAGACGATAGA 60.141 45.833 18.10 0.00 41.38 1.98
2384 2837 4.145807 ACCATGGTAGGAAGAGACGATAG 58.854 47.826 18.10 0.00 46.19 2.08
2385 2838 4.180377 ACCATGGTAGGAAGAGACGATA 57.820 45.455 18.10 0.00 0.00 2.92
2386 2839 3.033659 ACCATGGTAGGAAGAGACGAT 57.966 47.619 18.10 0.00 0.00 3.73
2387 2840 2.496070 CAACCATGGTAGGAAGAGACGA 59.504 50.000 20.12 0.00 0.00 4.20
2388 2841 2.418746 CCAACCATGGTAGGAAGAGACG 60.419 54.545 20.12 0.00 42.18 4.18
2389 2842 3.268023 CCAACCATGGTAGGAAGAGAC 57.732 52.381 20.12 0.00 42.18 3.36
2401 2854 3.346315 TCATTGTAGCTCACCAACCATG 58.654 45.455 0.00 0.00 0.00 3.66
2402 2855 3.719268 TCATTGTAGCTCACCAACCAT 57.281 42.857 0.00 0.00 0.00 3.55
2403 2856 3.008923 TCATCATTGTAGCTCACCAACCA 59.991 43.478 0.00 0.00 0.00 3.67
2404 2857 3.609853 TCATCATTGTAGCTCACCAACC 58.390 45.455 0.00 0.00 0.00 3.77
2405 2858 4.036027 CCATCATCATTGTAGCTCACCAAC 59.964 45.833 0.00 0.00 0.00 3.77
2406 2859 4.201657 CCATCATCATTGTAGCTCACCAA 58.798 43.478 0.00 0.00 0.00 3.67
2407 2860 3.200605 ACCATCATCATTGTAGCTCACCA 59.799 43.478 0.00 0.00 0.00 4.17
2408 2861 3.562973 CACCATCATCATTGTAGCTCACC 59.437 47.826 0.00 0.00 0.00 4.02
2409 2862 3.562973 CCACCATCATCATTGTAGCTCAC 59.437 47.826 0.00 0.00 0.00 3.51
2410 2863 3.434024 CCCACCATCATCATTGTAGCTCA 60.434 47.826 0.00 0.00 0.00 4.26
2411 2864 3.144506 CCCACCATCATCATTGTAGCTC 58.855 50.000 0.00 0.00 0.00 4.09
2412 2865 2.511218 ACCCACCATCATCATTGTAGCT 59.489 45.455 0.00 0.00 0.00 3.32
2413 2866 2.620115 CACCCACCATCATCATTGTAGC 59.380 50.000 0.00 0.00 0.00 3.58
2414 2867 3.117926 TCCACCCACCATCATCATTGTAG 60.118 47.826 0.00 0.00 0.00 2.74
2415 2868 2.849318 TCCACCCACCATCATCATTGTA 59.151 45.455 0.00 0.00 0.00 2.41
2416 2869 1.640149 TCCACCCACCATCATCATTGT 59.360 47.619 0.00 0.00 0.00 2.71
2417 2870 2.440517 TCCACCCACCATCATCATTG 57.559 50.000 0.00 0.00 0.00 2.82
2418 2871 3.693526 ATTCCACCCACCATCATCATT 57.306 42.857 0.00 0.00 0.00 2.57
2419 2872 3.693526 AATTCCACCCACCATCATCAT 57.306 42.857 0.00 0.00 0.00 2.45
2420 2873 3.471430 AAATTCCACCCACCATCATCA 57.529 42.857 0.00 0.00 0.00 3.07
2421 2874 3.768757 TCAAAATTCCACCCACCATCATC 59.231 43.478 0.00 0.00 0.00 2.92
2422 2875 3.770933 CTCAAAATTCCACCCACCATCAT 59.229 43.478 0.00 0.00 0.00 2.45
2423 2876 3.164268 CTCAAAATTCCACCCACCATCA 58.836 45.455 0.00 0.00 0.00 3.07
2424 2877 3.430453 TCTCAAAATTCCACCCACCATC 58.570 45.455 0.00 0.00 0.00 3.51
2425 2878 3.541242 TCTCAAAATTCCACCCACCAT 57.459 42.857 0.00 0.00 0.00 3.55
2426 2879 3.075882 AGATCTCAAAATTCCACCCACCA 59.924 43.478 0.00 0.00 0.00 4.17
2427 2880 3.701664 AGATCTCAAAATTCCACCCACC 58.298 45.455 0.00 0.00 0.00 4.61
2428 2881 4.082026 CCAAGATCTCAAAATTCCACCCAC 60.082 45.833 0.00 0.00 0.00 4.61
2429 2882 4.088634 CCAAGATCTCAAAATTCCACCCA 58.911 43.478 0.00 0.00 0.00 4.51
2430 2883 4.344104 TCCAAGATCTCAAAATTCCACCC 58.656 43.478 0.00 0.00 0.00 4.61
2431 2884 5.680665 GCATCCAAGATCTCAAAATTCCACC 60.681 44.000 0.00 0.00 0.00 4.61
2432 2885 5.346522 GCATCCAAGATCTCAAAATTCCAC 58.653 41.667 0.00 0.00 0.00 4.02
2433 2886 4.403432 GGCATCCAAGATCTCAAAATTCCA 59.597 41.667 0.00 0.00 0.00 3.53
2434 2887 4.498682 CGGCATCCAAGATCTCAAAATTCC 60.499 45.833 0.00 0.00 0.00 3.01
2435 2888 4.498682 CCGGCATCCAAGATCTCAAAATTC 60.499 45.833 0.00 0.00 0.00 2.17
2436 2889 3.382546 CCGGCATCCAAGATCTCAAAATT 59.617 43.478 0.00 0.00 0.00 1.82
2437 2890 2.954318 CCGGCATCCAAGATCTCAAAAT 59.046 45.455 0.00 0.00 0.00 1.82
2438 2891 2.368439 CCGGCATCCAAGATCTCAAAA 58.632 47.619 0.00 0.00 0.00 2.44
2439 2892 1.408683 CCCGGCATCCAAGATCTCAAA 60.409 52.381 0.00 0.00 0.00 2.69
2440 2893 0.181114 CCCGGCATCCAAGATCTCAA 59.819 55.000 0.00 0.00 0.00 3.02
2441 2894 1.699054 CCCCGGCATCCAAGATCTCA 61.699 60.000 0.00 0.00 0.00 3.27
2442 2895 1.072159 CCCCGGCATCCAAGATCTC 59.928 63.158 0.00 0.00 0.00 2.75
2443 2896 1.694169 ACCCCGGCATCCAAGATCT 60.694 57.895 0.00 0.00 0.00 2.75
2444 2897 1.526917 CACCCCGGCATCCAAGATC 60.527 63.158 0.00 0.00 0.00 2.75
2445 2898 2.597340 CACCCCGGCATCCAAGAT 59.403 61.111 0.00 0.00 0.00 2.40
2446 2899 3.727258 CCACCCCGGCATCCAAGA 61.727 66.667 0.00 0.00 0.00 3.02
2447 2900 4.047125 ACCACCCCGGCATCCAAG 62.047 66.667 0.00 0.00 39.03 3.61
2448 2901 4.358841 CACCACCCCGGCATCCAA 62.359 66.667 0.00 0.00 39.03 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.