Multiple sequence alignment - TraesCS4D01G286400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G286400 chr4D 100.000 4071 0 0 1 4071 457073633 457077703 0.000000e+00 7518.0
1 TraesCS4D01G286400 chr4D 96.371 248 7 2 3633 3879 111718212 111717966 1.360000e-109 407.0
2 TraesCS4D01G286400 chr4B 92.340 3068 115 48 572 3579 571050126 571047119 0.000000e+00 4253.0
3 TraesCS4D01G286400 chr4B 93.583 374 18 5 1 370 571051013 571050642 1.650000e-153 553.0
4 TraesCS4D01G286400 chr4B 83.246 191 27 3 1460 1649 593422859 593423045 1.950000e-38 171.0
5 TraesCS4D01G286400 chr4B 93.333 60 4 0 372 431 571050547 571050488 5.600000e-14 89.8
6 TraesCS4D01G286400 chr4A 88.947 2479 108 56 1155 3558 11297419 11299806 0.000000e+00 2907.0
7 TraesCS4D01G286400 chr4A 89.125 800 42 28 362 1128 11296174 11296961 0.000000e+00 953.0
8 TraesCS4D01G286400 chr4A 94.247 365 15 3 1 360 11295726 11296089 1.650000e-153 553.0
9 TraesCS4D01G286400 chr7A 97.925 241 5 0 3633 3873 125988382 125988622 6.290000e-113 418.0
10 TraesCS4D01G286400 chr7D 97.095 241 7 0 3633 3873 59727209 59727449 1.360000e-109 407.0
11 TraesCS4D01G286400 chr7B 96.371 248 7 2 3633 3879 478344661 478344415 1.360000e-109 407.0
12 TraesCS4D01G286400 chr3B 96.371 248 7 2 3633 3879 376972924 376972678 1.360000e-109 407.0
13 TraesCS4D01G286400 chr3A 96.016 251 9 1 3626 3876 488653954 488653705 1.360000e-109 407.0
14 TraesCS4D01G286400 chr3A 94.981 259 10 2 3624 3880 469346937 469347194 1.760000e-108 403.0
15 TraesCS4D01G286400 chr1A 95.294 255 10 2 3619 3873 558952257 558952005 1.760000e-108 403.0
16 TraesCS4D01G286400 chr2A 94.902 255 11 2 3622 3876 312130467 312130215 8.200000e-107 398.0
17 TraesCS4D01G286400 chr6D 83.495 206 32 2 1508 1712 380800280 380800076 1.490000e-44 191.0
18 TraesCS4D01G286400 chr6D 79.204 226 38 9 1466 1685 314056256 314056478 9.120000e-32 148.0
19 TraesCS4D01G286400 chr6B 83.010 206 33 2 1508 1712 568258599 568258395 6.950000e-43 185.0
20 TraesCS4D01G286400 chr6B 80.402 199 32 7 1466 1659 512448214 512448018 1.180000e-30 145.0
21 TraesCS4D01G286400 chr6A 82.524 206 34 2 1508 1712 522227015 522226811 3.230000e-41 180.0
22 TraesCS4D01G286400 chr6A 81.313 198 30 7 1464 1656 451660063 451660258 1.960000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G286400 chr4D 457073633 457077703 4070 False 7518.000000 7518 100.000000 1 4071 1 chr4D.!!$F1 4070
1 TraesCS4D01G286400 chr4B 571047119 571051013 3894 True 1631.933333 4253 93.085333 1 3579 3 chr4B.!!$R1 3578
2 TraesCS4D01G286400 chr4A 11295726 11299806 4080 False 1471.000000 2907 90.773000 1 3558 3 chr4A.!!$F1 3557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 345 0.323725 CACAGGGCCCACTTGCTAAT 60.324 55.0 27.56 0.0 0.00 1.73 F
2025 2934 1.106285 GGATCCATGTGGGTTTCAGC 58.894 55.0 6.95 0.0 38.11 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2260 3182 0.109272 TTGACTCCACTGCGATCGAC 60.109 55.0 21.57 10.98 0.0 4.20 R
3982 4985 0.037232 GGCGGCCTACTTATAGCTGG 60.037 60.0 12.87 0.00 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 7.717436 AGAAAGGACACAAAAAGGTTTGAAAAA 59.283 29.630 6.21 0.00 45.99 1.94
338 345 0.323725 CACAGGGCCCACTTGCTAAT 60.324 55.000 27.56 0.00 0.00 1.73
352 359 1.312815 GCTAATCCCCAGTGTGATGC 58.687 55.000 0.00 0.00 0.00 3.91
360 367 3.010027 TCCCCAGTGTGATGCTAATTTCA 59.990 43.478 0.00 0.00 0.00 2.69
440 623 9.334693 CAGCAAAATGTTACTGAATCTTTAGTC 57.665 33.333 0.00 0.00 31.67 2.59
484 667 7.156000 GGAAGAACCTAGGATAAGATAACTGC 58.844 42.308 17.98 0.00 35.41 4.40
485 668 7.202011 GGAAGAACCTAGGATAAGATAACTGCA 60.202 40.741 17.98 0.00 35.41 4.41
504 689 4.835678 TGCATGCTGATCAGAAGACTTAA 58.164 39.130 27.04 0.56 0.00 1.85
508 693 6.746364 GCATGCTGATCAGAAGACTTAAAAAG 59.254 38.462 27.04 0.00 0.00 2.27
516 701 7.206981 TCAGAAGACTTAAAAAGATGCCAAG 57.793 36.000 0.00 0.00 0.00 3.61
568 968 7.718334 ACTTCCTCCGATCCAAAATAAAATT 57.282 32.000 0.00 0.00 0.00 1.82
570 970 9.250246 ACTTCCTCCGATCCAAAATAAAATTAA 57.750 29.630 0.00 0.00 0.00 1.40
615 1019 4.748600 ACTAGAGTTGGTTCAAAACTACGC 59.251 41.667 0.00 0.00 37.98 4.42
621 1025 1.799994 GGTTCAAAACTACGCCGCTTA 59.200 47.619 0.00 0.00 0.00 3.09
667 1090 4.263435 TCCATTATTACCGCCGAAAAAGT 58.737 39.130 0.00 0.00 0.00 2.66
671 1100 7.028361 CCATTATTACCGCCGAAAAAGTAAAA 58.972 34.615 0.00 0.00 0.00 1.52
685 1114 3.942130 AGTAAAATTCACTGGGCTTGC 57.058 42.857 0.00 0.00 0.00 4.01
727 1162 6.323996 AGCAATACTGTGAGCCATAGTACTAA 59.676 38.462 6.70 0.00 39.96 2.24
891 1326 6.232581 TCCTTTTCCTCATCATCTTCTCTC 57.767 41.667 0.00 0.00 0.00 3.20
940 1381 3.387374 CAGCTCTCTCTCTCTCTCTCTCT 59.613 52.174 0.00 0.00 0.00 3.10
941 1382 3.640967 AGCTCTCTCTCTCTCTCTCTCTC 59.359 52.174 0.00 0.00 0.00 3.20
944 1385 2.370189 CTCTCTCTCTCTCTCTCTCCCC 59.630 59.091 0.00 0.00 0.00 4.81
946 1387 1.221635 CTCTCTCTCTCTCTCCCCCA 58.778 60.000 0.00 0.00 0.00 4.96
947 1388 1.782752 CTCTCTCTCTCTCTCCCCCAT 59.217 57.143 0.00 0.00 0.00 4.00
949 1390 1.782752 CTCTCTCTCTCTCCCCCATCT 59.217 57.143 0.00 0.00 0.00 2.90
1146 1590 3.403558 GAGCACCACCTCCCTCCC 61.404 72.222 0.00 0.00 0.00 4.30
1282 2157 1.153726 ACGGATCGTGCACGCAATA 60.154 52.632 33.63 17.70 39.18 1.90
1815 2718 4.399303 ACAATGCAAATTAGTGTAGCTCCC 59.601 41.667 0.00 0.00 0.00 4.30
2025 2934 1.106285 GGATCCATGTGGGTTTCAGC 58.894 55.000 6.95 0.00 38.11 4.26
2240 3150 1.333619 TCGCTGTTTGTTTCTTGAGCC 59.666 47.619 0.00 0.00 0.00 4.70
2243 3153 2.099756 GCTGTTTGTTTCTTGAGCCAGT 59.900 45.455 0.00 0.00 0.00 4.00
2260 3182 2.419297 CCAGTCTTTTGAGGAGGATCGG 60.419 54.545 0.00 0.00 34.37 4.18
2322 3244 2.103042 GGTCGTGGCATCTCTGTGC 61.103 63.158 0.00 0.00 44.31 4.57
2352 3275 2.475666 GTCGCAGGGACGTACTACT 58.524 57.895 1.18 0.00 35.61 2.57
2353 3276 0.376502 GTCGCAGGGACGTACTACTC 59.623 60.000 1.18 0.00 35.61 2.59
2354 3277 0.745845 TCGCAGGGACGTACTACTCC 60.746 60.000 0.00 0.00 0.00 3.85
2355 3278 1.722636 CGCAGGGACGTACTACTCCC 61.723 65.000 10.76 10.76 46.15 4.30
2356 3279 1.390383 GCAGGGACGTACTACTCCCC 61.390 65.000 13.84 0.00 46.92 4.81
2357 3280 0.754587 CAGGGACGTACTACTCCCCC 60.755 65.000 13.84 0.00 46.92 5.40
2358 3281 1.825622 GGGACGTACTACTCCCCCG 60.826 68.421 0.00 0.00 40.53 5.73
2359 3282 2.484928 GGACGTACTACTCCCCCGC 61.485 68.421 0.00 0.00 0.00 6.13
2360 3283 1.452833 GACGTACTACTCCCCCGCT 60.453 63.158 0.00 0.00 0.00 5.52
2361 3284 1.722636 GACGTACTACTCCCCCGCTG 61.723 65.000 0.00 0.00 0.00 5.18
2366 3300 2.364973 TACTCCCCCGCTGCATGA 60.365 61.111 0.00 0.00 0.00 3.07
2402 3336 5.334028 CCGCGATCAGATTTGCAATTATGTA 60.334 40.000 8.23 4.06 0.00 2.29
2403 3337 5.561499 CGCGATCAGATTTGCAATTATGTAC 59.439 40.000 13.80 9.23 0.00 2.90
2404 3338 6.564686 CGCGATCAGATTTGCAATTATGTACT 60.565 38.462 13.80 3.16 0.00 2.73
2405 3339 7.134815 GCGATCAGATTTGCAATTATGTACTT 58.865 34.615 13.80 0.00 0.00 2.24
2414 3348 2.341846 ATTATGTACTTGTGGGCCGG 57.658 50.000 0.00 0.00 0.00 6.13
2436 3370 2.027007 CCCGGAAACACCATTAGTACCA 60.027 50.000 0.73 0.00 38.90 3.25
2438 3372 2.676342 CGGAAACACCATTAGTACCAGC 59.324 50.000 0.00 0.00 38.90 4.85
2450 3384 5.950544 TTAGTACCAGCATGATTAGGTGT 57.049 39.130 3.35 0.00 39.69 4.16
2488 3427 3.326836 AGTGTAGCTTGCTTTCTCCTC 57.673 47.619 0.00 0.00 0.00 3.71
2501 3440 4.416620 CTTTCTCCTCGTTGCTAGTACTG 58.583 47.826 5.39 0.00 0.00 2.74
2534 3475 5.293814 CAGACTTCATAACATTCAGGCAGAG 59.706 44.000 0.00 0.00 0.00 3.35
2539 3480 4.223700 TCATAACATTCAGGCAGAGACAGT 59.776 41.667 0.00 0.00 0.00 3.55
2575 3522 3.999663 GCTGAACTTCTGCATGAACTACT 59.000 43.478 14.06 0.00 40.47 2.57
2579 3526 7.465245 GCTGAACTTCTGCATGAACTACTAATC 60.465 40.741 14.06 0.00 40.47 1.75
2581 3528 6.299805 ACTTCTGCATGAACTACTAATCCA 57.700 37.500 0.00 0.00 0.00 3.41
2603 3556 5.829924 CCAAAATTCTAGGTATCTGCCATGT 59.170 40.000 0.00 0.00 0.00 3.21
2629 3588 4.537965 CATTGCGTACTGGTACTAGCTAG 58.462 47.826 19.44 19.44 34.04 3.42
2630 3589 1.945394 TGCGTACTGGTACTAGCTAGC 59.055 52.381 20.91 6.62 34.04 3.42
2631 3590 1.266446 GCGTACTGGTACTAGCTAGCC 59.734 57.143 20.91 14.77 34.04 3.93
2632 3591 2.569059 CGTACTGGTACTAGCTAGCCA 58.431 52.381 20.91 18.37 34.04 4.75
2633 3592 2.947652 CGTACTGGTACTAGCTAGCCAA 59.052 50.000 20.91 4.36 34.04 4.52
2634 3593 3.379372 CGTACTGGTACTAGCTAGCCAAA 59.621 47.826 20.91 8.88 34.04 3.28
2635 3594 4.497674 CGTACTGGTACTAGCTAGCCAAAG 60.498 50.000 20.91 14.97 34.04 2.77
2640 3599 2.409948 ACTAGCTAGCCAAAGCAAGG 57.590 50.000 20.91 0.00 45.30 3.61
2642 3601 2.284190 CTAGCTAGCCAAAGCAAGGTC 58.716 52.381 12.13 0.00 45.30 3.85
2645 3604 1.363744 CTAGCCAAAGCAAGGTCGAG 58.636 55.000 0.00 0.00 43.56 4.04
2662 3621 3.857665 GTCGAGTCGATTGTTGAATGCTA 59.142 43.478 19.75 0.00 38.42 3.49
2698 3661 6.594744 TGTATGGTGATGAATGCAGATACTT 58.405 36.000 0.00 0.00 0.00 2.24
2707 3670 5.559770 TGAATGCAGATACTTGGACTGAAA 58.440 37.500 0.00 0.00 34.07 2.69
2845 3808 4.504596 GACGGCCCCATGGATGCA 62.505 66.667 22.64 0.00 0.00 3.96
2908 3874 2.757099 TTCTACCCCTCCGTCGCC 60.757 66.667 0.00 0.00 0.00 5.54
3082 4051 0.611062 TCAACTGATCGTCCGGTCCT 60.611 55.000 0.00 0.00 0.00 3.85
3264 4238 7.126421 AGTTCAGTTCATCCATGAGGTACTTAT 59.874 37.037 0.00 0.00 41.55 1.73
3284 4258 0.460109 TGAAGACGATGGTGATGCGG 60.460 55.000 0.00 0.00 0.00 5.69
3379 4363 4.927425 TGAAGCGTGTGTAGGTAGATTTTC 59.073 41.667 0.00 0.00 0.00 2.29
3407 4395 9.449719 AGTTGAATAGTACCTTTGGTATTCTTG 57.550 33.333 10.09 0.00 40.54 3.02
3410 4398 9.802039 TGAATAGTACCTTTGGTATTCTTGTTT 57.198 29.630 10.09 0.00 40.54 2.83
3473 4476 2.361757 TGAATTTGTGAGGCAGTGTTGG 59.638 45.455 0.00 0.00 0.00 3.77
3524 4527 2.158234 TGGTGCTTGTTCCCCCTATTTT 60.158 45.455 0.00 0.00 0.00 1.82
3525 4528 3.076182 TGGTGCTTGTTCCCCCTATTTTA 59.924 43.478 0.00 0.00 0.00 1.52
3526 4529 4.264623 TGGTGCTTGTTCCCCCTATTTTAT 60.265 41.667 0.00 0.00 0.00 1.40
3527 4530 5.044030 TGGTGCTTGTTCCCCCTATTTTATA 60.044 40.000 0.00 0.00 0.00 0.98
3528 4531 5.301045 GGTGCTTGTTCCCCCTATTTTATAC 59.699 44.000 0.00 0.00 0.00 1.47
3564 4567 6.726230 TGAAGACTATGACATACTAAGCGTC 58.274 40.000 0.00 0.00 0.00 5.19
3565 4568 5.345609 AGACTATGACATACTAAGCGTCG 57.654 43.478 0.00 0.00 32.17 5.12
3566 4569 5.055144 AGACTATGACATACTAAGCGTCGA 58.945 41.667 0.00 0.00 32.17 4.20
3567 4570 5.701750 AGACTATGACATACTAAGCGTCGAT 59.298 40.000 0.00 0.00 32.17 3.59
3568 4571 5.690816 ACTATGACATACTAAGCGTCGATG 58.309 41.667 0.00 0.00 32.17 3.84
3569 4572 2.727777 TGACATACTAAGCGTCGATGC 58.272 47.619 22.11 22.11 32.17 3.91
3570 4573 2.098443 TGACATACTAAGCGTCGATGCA 59.902 45.455 30.02 10.67 37.31 3.96
3571 4574 3.243401 TGACATACTAAGCGTCGATGCAT 60.243 43.478 30.02 21.62 37.31 3.96
3572 4575 3.309388 ACATACTAAGCGTCGATGCATC 58.691 45.455 30.02 17.10 37.31 3.91
3573 4576 3.243401 ACATACTAAGCGTCGATGCATCA 60.243 43.478 30.02 13.94 37.31 3.07
3574 4577 1.845266 ACTAAGCGTCGATGCATCAG 58.155 50.000 30.02 23.25 37.31 2.90
3575 4578 1.135139 ACTAAGCGTCGATGCATCAGT 59.865 47.619 30.02 23.83 37.31 3.41
3576 4579 2.196749 CTAAGCGTCGATGCATCAGTT 58.803 47.619 30.02 17.58 37.31 3.16
3577 4580 0.723414 AAGCGTCGATGCATCAGTTG 59.277 50.000 30.02 13.10 37.31 3.16
3586 4589 3.915575 CATCAGTTGCTCCAGGGC 58.084 61.111 0.00 0.00 0.00 5.19
3587 4590 1.302285 CATCAGTTGCTCCAGGGCT 59.698 57.895 0.00 0.00 0.00 5.19
3588 4591 0.747283 CATCAGTTGCTCCAGGGCTC 60.747 60.000 0.00 0.00 0.00 4.70
3589 4592 1.203441 ATCAGTTGCTCCAGGGCTCA 61.203 55.000 0.00 0.00 0.00 4.26
3590 4593 1.073722 CAGTTGCTCCAGGGCTCAA 59.926 57.895 0.00 0.00 0.00 3.02
3591 4594 0.323178 CAGTTGCTCCAGGGCTCAAT 60.323 55.000 0.00 0.00 0.00 2.57
3592 4595 0.323178 AGTTGCTCCAGGGCTCAATG 60.323 55.000 0.00 0.00 0.00 2.82
3593 4596 1.679977 TTGCTCCAGGGCTCAATGC 60.680 57.895 0.00 0.00 41.94 3.56
3594 4597 2.146146 TTGCTCCAGGGCTCAATGCT 62.146 55.000 0.00 0.00 42.39 3.79
3595 4598 1.273986 TGCTCCAGGGCTCAATGCTA 61.274 55.000 0.00 0.00 42.39 3.49
3596 4599 0.107017 GCTCCAGGGCTCAATGCTAA 60.107 55.000 0.00 0.00 42.39 3.09
3597 4600 1.673168 CTCCAGGGCTCAATGCTAAC 58.327 55.000 0.00 0.00 42.39 2.34
3598 4601 0.991146 TCCAGGGCTCAATGCTAACA 59.009 50.000 0.00 0.00 42.39 2.41
3599 4602 1.098050 CCAGGGCTCAATGCTAACAC 58.902 55.000 0.00 0.00 42.39 3.32
3600 4603 0.729116 CAGGGCTCAATGCTAACACG 59.271 55.000 0.00 0.00 42.39 4.49
3601 4604 1.026718 AGGGCTCAATGCTAACACGC 61.027 55.000 0.00 0.00 42.39 5.34
3602 4605 1.060937 GGCTCAATGCTAACACGCG 59.939 57.895 3.53 3.53 42.39 6.01
3603 4606 1.581147 GCTCAATGCTAACACGCGC 60.581 57.895 5.73 0.00 38.95 6.86
3604 4607 1.787215 CTCAATGCTAACACGCGCA 59.213 52.632 5.73 0.00 40.87 6.09
3606 4609 0.373370 TCAATGCTAACACGCGCATC 59.627 50.000 5.73 0.00 45.41 3.91
3607 4610 0.589729 CAATGCTAACACGCGCATCC 60.590 55.000 5.73 0.00 45.41 3.51
3608 4611 0.744414 AATGCTAACACGCGCATCCT 60.744 50.000 5.73 0.00 45.41 3.24
3609 4612 0.744414 ATGCTAACACGCGCATCCTT 60.744 50.000 5.73 0.00 42.83 3.36
3610 4613 0.953471 TGCTAACACGCGCATCCTTT 60.953 50.000 5.73 0.00 0.00 3.11
3611 4614 0.168128 GCTAACACGCGCATCCTTTT 59.832 50.000 5.73 0.00 0.00 2.27
3612 4615 1.401018 GCTAACACGCGCATCCTTTTT 60.401 47.619 5.73 0.00 0.00 1.94
3613 4616 2.241722 CTAACACGCGCATCCTTTTTG 58.758 47.619 5.73 0.00 0.00 2.44
3614 4617 0.383949 AACACGCGCATCCTTTTTGT 59.616 45.000 5.73 0.00 0.00 2.83
3615 4618 1.231221 ACACGCGCATCCTTTTTGTA 58.769 45.000 5.73 0.00 0.00 2.41
3616 4619 1.810151 ACACGCGCATCCTTTTTGTAT 59.190 42.857 5.73 0.00 0.00 2.29
3617 4620 2.176369 CACGCGCATCCTTTTTGTATG 58.824 47.619 5.73 0.00 0.00 2.39
3618 4621 1.810151 ACGCGCATCCTTTTTGTATGT 59.190 42.857 5.73 0.00 0.00 2.29
3619 4622 3.004171 ACGCGCATCCTTTTTGTATGTA 58.996 40.909 5.73 0.00 0.00 2.29
3620 4623 3.063452 ACGCGCATCCTTTTTGTATGTAG 59.937 43.478 5.73 0.00 0.00 2.74
3621 4624 3.063452 CGCGCATCCTTTTTGTATGTAGT 59.937 43.478 8.75 0.00 0.00 2.73
3622 4625 4.269123 CGCGCATCCTTTTTGTATGTAGTA 59.731 41.667 8.75 0.00 0.00 1.82
3623 4626 5.220510 CGCGCATCCTTTTTGTATGTAGTAA 60.221 40.000 8.75 0.00 0.00 2.24
3624 4627 6.548171 GCGCATCCTTTTTGTATGTAGTAAA 58.452 36.000 0.30 0.00 0.00 2.01
3625 4628 7.024768 GCGCATCCTTTTTGTATGTAGTAAAA 58.975 34.615 0.30 0.00 0.00 1.52
3626 4629 7.539366 GCGCATCCTTTTTGTATGTAGTAAAAA 59.461 33.333 0.30 0.00 33.67 1.94
3627 4630 9.567848 CGCATCCTTTTTGTATGTAGTAAAAAT 57.432 29.630 0.00 0.00 34.11 1.82
3638 4641 9.169592 TGTATGTAGTAAAAATTGCTTACTCCC 57.830 33.333 13.72 8.72 39.66 4.30
3639 4642 9.392259 GTATGTAGTAAAAATTGCTTACTCCCT 57.608 33.333 13.72 2.99 39.66 4.20
3640 4643 7.916914 TGTAGTAAAAATTGCTTACTCCCTC 57.083 36.000 13.72 7.05 39.66 4.30
3641 4644 6.882678 TGTAGTAAAAATTGCTTACTCCCTCC 59.117 38.462 13.72 3.65 39.66 4.30
3642 4645 6.140968 AGTAAAAATTGCTTACTCCCTCCT 57.859 37.500 7.19 0.00 35.16 3.69
3643 4646 6.552932 AGTAAAAATTGCTTACTCCCTCCTT 58.447 36.000 7.19 0.00 35.16 3.36
3644 4647 5.984695 AAAAATTGCTTACTCCCTCCTTC 57.015 39.130 0.00 0.00 0.00 3.46
3645 4648 3.653835 AATTGCTTACTCCCTCCTTCC 57.346 47.619 0.00 0.00 0.00 3.46
3646 4649 2.038863 TTGCTTACTCCCTCCTTCCA 57.961 50.000 0.00 0.00 0.00 3.53
3647 4650 2.270434 TGCTTACTCCCTCCTTCCAT 57.730 50.000 0.00 0.00 0.00 3.41
3648 4651 2.119495 TGCTTACTCCCTCCTTCCATC 58.881 52.381 0.00 0.00 0.00 3.51
3649 4652 2.293184 TGCTTACTCCCTCCTTCCATCT 60.293 50.000 0.00 0.00 0.00 2.90
3650 4653 3.052109 TGCTTACTCCCTCCTTCCATCTA 60.052 47.826 0.00 0.00 0.00 1.98
3651 4654 4.164204 GCTTACTCCCTCCTTCCATCTAT 58.836 47.826 0.00 0.00 0.00 1.98
3652 4655 5.162870 TGCTTACTCCCTCCTTCCATCTATA 60.163 44.000 0.00 0.00 0.00 1.31
3653 4656 5.961421 GCTTACTCCCTCCTTCCATCTATAT 59.039 44.000 0.00 0.00 0.00 0.86
3654 4657 7.126733 GCTTACTCCCTCCTTCCATCTATATA 58.873 42.308 0.00 0.00 0.00 0.86
3655 4658 7.286775 GCTTACTCCCTCCTTCCATCTATATAG 59.713 44.444 3.10 3.10 0.00 1.31
3656 4659 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
3657 4660 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
3658 4661 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
3659 4662 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
3660 4663 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
3661 4664 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
3662 4665 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
3663 4666 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
3664 4667 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
3665 4668 6.465035 CCTTCCATCTATATAGGGCCTAATGC 60.465 46.154 18.91 0.00 40.16 3.56
3666 4669 4.588951 TCCATCTATATAGGGCCTAATGCG 59.411 45.833 18.91 10.04 42.61 4.73
3667 4670 4.345257 CCATCTATATAGGGCCTAATGCGT 59.655 45.833 18.91 2.76 42.61 5.24
3668 4671 5.163301 CCATCTATATAGGGCCTAATGCGTT 60.163 44.000 18.91 1.94 42.61 4.84
3669 4672 6.349300 CATCTATATAGGGCCTAATGCGTTT 58.651 40.000 18.91 1.12 42.61 3.60
3670 4673 6.368779 TCTATATAGGGCCTAATGCGTTTT 57.631 37.500 18.91 0.30 42.61 2.43
3671 4674 6.775708 TCTATATAGGGCCTAATGCGTTTTT 58.224 36.000 18.91 0.00 42.61 1.94
3693 4696 7.915293 TTTTAAGATCGCCTTTGACTATTGA 57.085 32.000 0.00 0.00 36.34 2.57
3694 4697 6.903883 TTAAGATCGCCTTTGACTATTGAC 57.096 37.500 0.00 0.00 36.34 3.18
3695 4698 4.471904 AGATCGCCTTTGACTATTGACA 57.528 40.909 0.00 0.00 0.00 3.58
3696 4699 4.832248 AGATCGCCTTTGACTATTGACAA 58.168 39.130 0.00 0.00 0.00 3.18
3697 4700 4.872691 AGATCGCCTTTGACTATTGACAAG 59.127 41.667 0.00 0.00 0.00 3.16
3698 4701 4.265904 TCGCCTTTGACTATTGACAAGA 57.734 40.909 0.00 0.00 0.00 3.02
3699 4702 4.832248 TCGCCTTTGACTATTGACAAGAT 58.168 39.130 0.00 0.00 0.00 2.40
3700 4703 5.245531 TCGCCTTTGACTATTGACAAGATT 58.754 37.500 0.00 0.00 0.00 2.40
3701 4704 6.403049 TCGCCTTTGACTATTGACAAGATTA 58.597 36.000 0.00 0.00 0.00 1.75
3702 4705 6.876789 TCGCCTTTGACTATTGACAAGATTAA 59.123 34.615 0.00 0.00 0.00 1.40
3703 4706 7.552687 TCGCCTTTGACTATTGACAAGATTAAT 59.447 33.333 0.00 0.00 0.00 1.40
3704 4707 8.826710 CGCCTTTGACTATTGACAAGATTAATA 58.173 33.333 0.00 0.00 0.00 0.98
3762 4765 5.803020 GAAAGCTCCTTTCATACACGAAT 57.197 39.130 11.65 0.00 46.23 3.34
3763 4766 6.183309 GAAAGCTCCTTTCATACACGAATT 57.817 37.500 11.65 0.00 46.23 2.17
3764 4767 6.575162 AAAGCTCCTTTCATACACGAATTT 57.425 33.333 0.00 0.00 0.00 1.82
3765 4768 7.681939 AAAGCTCCTTTCATACACGAATTTA 57.318 32.000 0.00 0.00 0.00 1.40
3766 4769 7.681939 AAGCTCCTTTCATACACGAATTTAA 57.318 32.000 0.00 0.00 0.00 1.52
3767 4770 7.073342 AGCTCCTTTCATACACGAATTTAAC 57.927 36.000 0.00 0.00 0.00 2.01
3768 4771 5.957796 GCTCCTTTCATACACGAATTTAACG 59.042 40.000 0.00 0.00 0.00 3.18
3769 4772 6.411630 TCCTTTCATACACGAATTTAACGG 57.588 37.500 0.00 0.00 34.93 4.44
3770 4773 5.933463 TCCTTTCATACACGAATTTAACGGT 59.067 36.000 0.00 0.00 34.93 4.83
3771 4774 6.019152 CCTTTCATACACGAATTTAACGGTG 58.981 40.000 0.00 0.00 34.93 4.94
3772 4775 6.347888 CCTTTCATACACGAATTTAACGGTGT 60.348 38.462 0.00 1.12 34.93 4.16
3773 4776 5.518529 TCATACACGAATTTAACGGTGTG 57.481 39.130 5.97 0.00 34.93 3.82
3774 4777 2.673976 ACACGAATTTAACGGTGTGC 57.326 45.000 0.00 0.00 34.93 4.57
3775 4778 2.215196 ACACGAATTTAACGGTGTGCT 58.785 42.857 0.00 0.00 34.93 4.40
3776 4779 2.614983 ACACGAATTTAACGGTGTGCTT 59.385 40.909 0.00 0.00 34.93 3.91
3777 4780 3.065648 ACACGAATTTAACGGTGTGCTTT 59.934 39.130 0.00 0.00 34.93 3.51
3778 4781 3.420576 CACGAATTTAACGGTGTGCTTTG 59.579 43.478 0.00 0.00 34.93 2.77
3779 4782 3.065648 ACGAATTTAACGGTGTGCTTTGT 59.934 39.130 0.00 0.00 34.93 2.83
3780 4783 3.420576 CGAATTTAACGGTGTGCTTTGTG 59.579 43.478 0.00 0.00 0.00 3.33
3781 4784 4.356289 GAATTTAACGGTGTGCTTTGTGT 58.644 39.130 0.00 0.00 0.00 3.72
3782 4785 5.502153 AATTTAACGGTGTGCTTTGTGTA 57.498 34.783 0.00 0.00 0.00 2.90
3783 4786 4.959596 TTTAACGGTGTGCTTTGTGTAA 57.040 36.364 0.00 0.00 0.00 2.41
3784 4787 4.539509 TTAACGGTGTGCTTTGTGTAAG 57.460 40.909 0.00 0.00 36.90 2.34
3785 4788 2.032680 ACGGTGTGCTTTGTGTAAGT 57.967 45.000 0.00 0.00 36.19 2.24
3786 4789 2.361789 ACGGTGTGCTTTGTGTAAGTT 58.638 42.857 0.00 0.00 36.19 2.66
3787 4790 2.096819 ACGGTGTGCTTTGTGTAAGTTG 59.903 45.455 0.00 0.00 36.19 3.16
3788 4791 2.459934 GGTGTGCTTTGTGTAAGTTGC 58.540 47.619 0.00 0.00 36.19 4.17
3789 4792 2.159310 GGTGTGCTTTGTGTAAGTTGCA 60.159 45.455 0.00 0.00 36.19 4.08
3790 4793 3.490761 GGTGTGCTTTGTGTAAGTTGCAT 60.491 43.478 0.00 0.00 36.19 3.96
3791 4794 3.486841 GTGTGCTTTGTGTAAGTTGCATG 59.513 43.478 0.00 0.00 36.19 4.06
3792 4795 3.130164 TGTGCTTTGTGTAAGTTGCATGT 59.870 39.130 0.00 0.00 36.19 3.21
3793 4796 3.730715 GTGCTTTGTGTAAGTTGCATGTC 59.269 43.478 0.00 0.00 36.19 3.06
3794 4797 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
3795 4798 4.037803 TGCTTTGTGTAAGTTGCATGTCAT 59.962 37.500 0.00 0.00 36.19 3.06
3796 4799 5.240403 TGCTTTGTGTAAGTTGCATGTCATA 59.760 36.000 0.00 0.00 36.19 2.15
3797 4800 6.072008 TGCTTTGTGTAAGTTGCATGTCATAT 60.072 34.615 0.00 0.00 36.19 1.78
3798 4801 7.120432 TGCTTTGTGTAAGTTGCATGTCATATA 59.880 33.333 0.00 0.00 36.19 0.86
3799 4802 8.131100 GCTTTGTGTAAGTTGCATGTCATATAT 58.869 33.333 0.00 0.00 36.19 0.86
3808 4811 8.859236 AGTTGCATGTCATATATTATTGCTCT 57.141 30.769 0.00 0.00 0.00 4.09
3809 4812 9.948964 AGTTGCATGTCATATATTATTGCTCTA 57.051 29.630 0.00 0.00 0.00 2.43
3828 4831 9.801873 TTGCTCTAATATTTGGTCAAAATTAGC 57.198 29.630 19.36 15.97 39.29 3.09
3829 4832 8.413229 TGCTCTAATATTTGGTCAAAATTAGCC 58.587 33.333 19.36 15.93 39.29 3.93
3830 4833 8.633561 GCTCTAATATTTGGTCAAAATTAGCCT 58.366 33.333 19.36 3.12 39.29 4.58
3832 4835 8.836413 TCTAATATTTGGTCAAAATTAGCCTCG 58.164 33.333 19.36 0.00 39.29 4.63
3833 4836 7.639113 AATATTTGGTCAAAATTAGCCTCGA 57.361 32.000 0.00 0.00 39.29 4.04
3834 4837 5.975693 ATTTGGTCAAAATTAGCCTCGAA 57.024 34.783 0.00 0.00 34.72 3.71
3835 4838 5.776173 TTTGGTCAAAATTAGCCTCGAAA 57.224 34.783 0.00 0.00 0.00 3.46
3836 4839 5.776173 TTGGTCAAAATTAGCCTCGAAAA 57.224 34.783 0.00 0.00 0.00 2.29
3837 4840 5.776173 TGGTCAAAATTAGCCTCGAAAAA 57.224 34.783 0.00 0.00 0.00 1.94
3838 4841 6.339587 TGGTCAAAATTAGCCTCGAAAAAT 57.660 33.333 0.00 0.00 0.00 1.82
3839 4842 6.155827 TGGTCAAAATTAGCCTCGAAAAATG 58.844 36.000 0.00 0.00 0.00 2.32
3840 4843 5.062183 GGTCAAAATTAGCCTCGAAAAATGC 59.938 40.000 0.00 0.00 0.00 3.56
3841 4844 5.633182 GTCAAAATTAGCCTCGAAAAATGCA 59.367 36.000 0.00 0.00 0.00 3.96
3842 4845 6.311200 GTCAAAATTAGCCTCGAAAAATGCAT 59.689 34.615 0.00 0.00 0.00 3.96
3843 4846 6.873076 TCAAAATTAGCCTCGAAAAATGCATT 59.127 30.769 5.99 5.99 0.00 3.56
3844 4847 8.031864 TCAAAATTAGCCTCGAAAAATGCATTA 58.968 29.630 13.39 0.00 0.00 1.90
3845 4848 7.992180 AAATTAGCCTCGAAAAATGCATTAG 57.008 32.000 13.39 5.76 0.00 1.73
3846 4849 5.499139 TTAGCCTCGAAAAATGCATTAGG 57.501 39.130 13.39 15.86 0.00 2.69
3847 4850 2.099756 AGCCTCGAAAAATGCATTAGGC 59.900 45.455 30.44 30.44 46.67 3.93
3848 4851 2.799562 GCCTCGAAAAATGCATTAGGCC 60.800 50.000 28.65 16.53 41.73 5.19
3849 4852 2.223805 CCTCGAAAAATGCATTAGGCCC 60.224 50.000 13.39 0.17 43.89 5.80
3850 4853 2.689983 CTCGAAAAATGCATTAGGCCCT 59.310 45.455 13.39 0.00 43.89 5.19
3851 4854 3.882888 CTCGAAAAATGCATTAGGCCCTA 59.117 43.478 13.39 0.00 43.89 3.53
3852 4855 4.469657 TCGAAAAATGCATTAGGCCCTAT 58.530 39.130 13.39 0.00 43.89 2.57
3853 4856 5.626142 TCGAAAAATGCATTAGGCCCTATA 58.374 37.500 13.39 0.00 43.89 1.31
3854 4857 6.245408 TCGAAAAATGCATTAGGCCCTATAT 58.755 36.000 13.39 0.00 43.89 0.86
3855 4858 7.398829 TCGAAAAATGCATTAGGCCCTATATA 58.601 34.615 13.39 0.00 43.89 0.86
3856 4859 7.885922 TCGAAAAATGCATTAGGCCCTATATAA 59.114 33.333 13.39 0.00 43.89 0.98
3857 4860 8.519526 CGAAAAATGCATTAGGCCCTATATAAA 58.480 33.333 13.39 0.00 43.89 1.40
3860 4863 7.902920 AATGCATTAGGCCCTATATAAATGG 57.097 36.000 11.02 0.00 43.89 3.16
3861 4864 6.650622 TGCATTAGGCCCTATATAAATGGA 57.349 37.500 0.00 0.22 43.89 3.41
3862 4865 7.038531 TGCATTAGGCCCTATATAAATGGAA 57.961 36.000 0.00 0.00 43.89 3.53
3863 4866 7.118723 TGCATTAGGCCCTATATAAATGGAAG 58.881 38.462 0.00 0.00 43.89 3.46
3864 4867 6.547510 GCATTAGGCCCTATATAAATGGAAGG 59.452 42.308 0.00 0.00 36.11 3.46
3865 4868 7.585387 GCATTAGGCCCTATATAAATGGAAGGA 60.585 40.741 0.00 0.00 36.11 3.36
3866 4869 7.510675 TTAGGCCCTATATAAATGGAAGGAG 57.489 40.000 0.00 0.00 0.00 3.69
3867 4870 4.790790 AGGCCCTATATAAATGGAAGGAGG 59.209 45.833 0.00 0.00 0.00 4.30
3868 4871 4.079730 GGCCCTATATAAATGGAAGGAGGG 60.080 50.000 0.00 0.00 44.52 4.30
3869 4872 4.788617 GCCCTATATAAATGGAAGGAGGGA 59.211 45.833 7.83 0.00 44.48 4.20
3870 4873 5.104318 GCCCTATATAAATGGAAGGAGGGAG 60.104 48.000 7.83 0.00 44.48 4.30
3871 4874 6.032693 CCCTATATAAATGGAAGGAGGGAGT 58.967 44.000 0.00 0.00 44.48 3.85
3872 4875 7.196901 CCCTATATAAATGGAAGGAGGGAGTA 58.803 42.308 0.00 0.00 44.48 2.59
3873 4876 7.125963 CCCTATATAAATGGAAGGAGGGAGTAC 59.874 44.444 0.00 0.00 44.48 2.73
3874 4877 7.901861 CCTATATAAATGGAAGGAGGGAGTACT 59.098 40.741 0.00 0.00 0.00 2.73
3875 4878 9.992442 CTATATAAATGGAAGGAGGGAGTACTA 57.008 37.037 0.00 0.00 0.00 1.82
3877 4880 9.860393 ATATAAATGGAAGGAGGGAGTACTATT 57.140 33.333 0.00 0.00 0.00 1.73
3878 4881 5.896073 AATGGAAGGAGGGAGTACTATTG 57.104 43.478 0.00 0.00 0.00 1.90
3879 4882 4.348020 TGGAAGGAGGGAGTACTATTGT 57.652 45.455 0.00 0.00 0.00 2.71
3880 4883 4.287552 TGGAAGGAGGGAGTACTATTGTC 58.712 47.826 0.00 0.00 0.00 3.18
3881 4884 3.318557 GGAAGGAGGGAGTACTATTGTCG 59.681 52.174 0.00 0.00 0.00 4.35
3882 4885 3.947612 AGGAGGGAGTACTATTGTCGA 57.052 47.619 0.00 0.00 0.00 4.20
3883 4886 4.456662 AGGAGGGAGTACTATTGTCGAT 57.543 45.455 0.00 0.00 0.00 3.59
3884 4887 4.805744 AGGAGGGAGTACTATTGTCGATT 58.194 43.478 0.00 0.00 0.00 3.34
3885 4888 4.585162 AGGAGGGAGTACTATTGTCGATTG 59.415 45.833 0.00 0.00 0.00 2.67
3886 4889 4.341520 GGAGGGAGTACTATTGTCGATTGT 59.658 45.833 0.00 0.00 0.00 2.71
3887 4890 5.163437 GGAGGGAGTACTATTGTCGATTGTT 60.163 44.000 0.00 0.00 0.00 2.83
3888 4891 6.295719 AGGGAGTACTATTGTCGATTGTTT 57.704 37.500 0.00 0.00 0.00 2.83
3889 4892 6.106673 AGGGAGTACTATTGTCGATTGTTTG 58.893 40.000 0.00 0.00 0.00 2.93
3890 4893 6.070995 AGGGAGTACTATTGTCGATTGTTTGA 60.071 38.462 0.00 0.00 0.00 2.69
3891 4894 6.592607 GGGAGTACTATTGTCGATTGTTTGAA 59.407 38.462 0.00 0.00 0.00 2.69
3892 4895 7.118680 GGGAGTACTATTGTCGATTGTTTGAAA 59.881 37.037 0.00 0.00 0.00 2.69
3893 4896 7.955864 GGAGTACTATTGTCGATTGTTTGAAAC 59.044 37.037 0.14 0.14 0.00 2.78
3894 4897 8.603242 AGTACTATTGTCGATTGTTTGAAACT 57.397 30.769 9.69 0.00 0.00 2.66
3895 4898 9.052759 AGTACTATTGTCGATTGTTTGAAACTT 57.947 29.630 9.69 0.00 0.00 2.66
3896 4899 9.314501 GTACTATTGTCGATTGTTTGAAACTTC 57.685 33.333 9.69 5.70 0.00 3.01
3897 4900 7.925993 ACTATTGTCGATTGTTTGAAACTTCA 58.074 30.769 9.69 0.00 34.92 3.02
3898 4901 8.567948 ACTATTGTCGATTGTTTGAAACTTCAT 58.432 29.630 9.69 0.00 37.00 2.57
3901 4904 8.781067 TTGTCGATTGTTTGAAACTTCATAAG 57.219 30.769 9.69 0.00 37.00 1.73
3902 4905 8.148807 TGTCGATTGTTTGAAACTTCATAAGA 57.851 30.769 9.69 0.00 37.00 2.10
3903 4906 8.616942 TGTCGATTGTTTGAAACTTCATAAGAA 58.383 29.630 9.69 0.00 37.00 2.52
3904 4907 9.612620 GTCGATTGTTTGAAACTTCATAAGAAT 57.387 29.630 9.69 0.00 37.00 2.40
3931 4934 8.868635 AAATCTACGCTACATAGTACCTTTTC 57.131 34.615 0.00 0.00 0.00 2.29
3932 4935 7.578310 ATCTACGCTACATAGTACCTTTTCA 57.422 36.000 0.00 0.00 0.00 2.69
3933 4936 6.789262 TCTACGCTACATAGTACCTTTTCAC 58.211 40.000 0.00 0.00 0.00 3.18
3934 4937 5.395682 ACGCTACATAGTACCTTTTCACA 57.604 39.130 0.00 0.00 0.00 3.58
3935 4938 5.408356 ACGCTACATAGTACCTTTTCACAG 58.592 41.667 0.00 0.00 0.00 3.66
3936 4939 5.184479 ACGCTACATAGTACCTTTTCACAGA 59.816 40.000 0.00 0.00 0.00 3.41
3937 4940 5.515626 CGCTACATAGTACCTTTTCACAGAC 59.484 44.000 0.00 0.00 0.00 3.51
3938 4941 6.625300 CGCTACATAGTACCTTTTCACAGACT 60.625 42.308 0.00 0.00 0.00 3.24
3939 4942 7.414873 CGCTACATAGTACCTTTTCACAGACTA 60.415 40.741 0.00 0.00 0.00 2.59
3940 4943 8.414778 GCTACATAGTACCTTTTCACAGACTAT 58.585 37.037 0.00 0.00 31.81 2.12
3950 4953 9.213777 ACCTTTTCACAGACTATATATCAAGGA 57.786 33.333 0.00 0.00 32.00 3.36
3951 4954 9.703892 CCTTTTCACAGACTATATATCAAGGAG 57.296 37.037 0.00 0.00 0.00 3.69
3954 4957 8.996651 TTCACAGACTATATATCAAGGAGACA 57.003 34.615 0.00 0.00 0.00 3.41
3955 4958 9.593565 TTCACAGACTATATATCAAGGAGACAT 57.406 33.333 0.00 0.00 0.00 3.06
3956 4959 9.018582 TCACAGACTATATATCAAGGAGACATG 57.981 37.037 0.00 0.00 0.00 3.21
3957 4960 8.801299 CACAGACTATATATCAAGGAGACATGT 58.199 37.037 0.00 0.00 0.00 3.21
3958 4961 8.801299 ACAGACTATATATCAAGGAGACATGTG 58.199 37.037 1.15 0.00 0.00 3.21
3959 4962 9.018582 CAGACTATATATCAAGGAGACATGTGA 57.981 37.037 1.15 0.00 0.00 3.58
3960 4963 9.766754 AGACTATATATCAAGGAGACATGTGAT 57.233 33.333 1.15 0.79 34.34 3.06
3962 4965 8.681806 ACTATATATCAAGGAGACATGTGATCG 58.318 37.037 1.15 0.00 32.79 3.69
3963 4966 2.967599 TCAAGGAGACATGTGATCGG 57.032 50.000 1.15 0.00 0.00 4.18
3964 4967 2.456577 TCAAGGAGACATGTGATCGGA 58.543 47.619 1.15 0.00 0.00 4.55
3965 4968 2.831526 TCAAGGAGACATGTGATCGGAA 59.168 45.455 1.15 0.00 0.00 4.30
3966 4969 3.452264 TCAAGGAGACATGTGATCGGAAT 59.548 43.478 1.15 0.00 0.00 3.01
3967 4970 4.080919 TCAAGGAGACATGTGATCGGAATT 60.081 41.667 1.15 0.00 0.00 2.17
3968 4971 5.128663 TCAAGGAGACATGTGATCGGAATTA 59.871 40.000 1.15 0.00 0.00 1.40
3969 4972 4.950050 AGGAGACATGTGATCGGAATTAC 58.050 43.478 1.15 0.00 0.00 1.89
3970 4973 4.651503 AGGAGACATGTGATCGGAATTACT 59.348 41.667 1.15 0.00 0.00 2.24
3971 4974 5.833667 AGGAGACATGTGATCGGAATTACTA 59.166 40.000 1.15 0.00 0.00 1.82
3972 4975 6.015856 AGGAGACATGTGATCGGAATTACTAG 60.016 42.308 1.15 0.00 0.00 2.57
3973 4976 6.016192 GGAGACATGTGATCGGAATTACTAGA 60.016 42.308 1.15 0.00 0.00 2.43
3974 4977 7.348080 AGACATGTGATCGGAATTACTAGAA 57.652 36.000 1.15 0.00 0.00 2.10
3975 4978 7.782049 AGACATGTGATCGGAATTACTAGAAA 58.218 34.615 1.15 0.00 0.00 2.52
3976 4979 8.424918 AGACATGTGATCGGAATTACTAGAAAT 58.575 33.333 1.15 0.00 0.00 2.17
3977 4980 8.370493 ACATGTGATCGGAATTACTAGAAATG 57.630 34.615 0.00 0.00 0.00 2.32
3978 4981 7.442364 ACATGTGATCGGAATTACTAGAAATGG 59.558 37.037 0.00 0.00 0.00 3.16
3979 4982 6.288294 TGTGATCGGAATTACTAGAAATGGG 58.712 40.000 0.00 0.00 0.00 4.00
3980 4983 5.701290 GTGATCGGAATTACTAGAAATGGGG 59.299 44.000 0.00 0.00 0.00 4.96
3981 4984 5.605069 TGATCGGAATTACTAGAAATGGGGA 59.395 40.000 0.00 0.00 0.00 4.81
3982 4985 5.286267 TCGGAATTACTAGAAATGGGGAC 57.714 43.478 0.00 0.00 0.00 4.46
3998 5001 1.624312 GGGACCAGCTATAAGTAGGCC 59.376 57.143 0.00 0.00 0.00 5.19
3999 5002 1.272769 GGACCAGCTATAAGTAGGCCG 59.727 57.143 0.00 0.00 0.00 6.13
4000 5003 0.680061 ACCAGCTATAAGTAGGCCGC 59.320 55.000 0.00 0.00 0.00 6.53
4001 5004 0.037232 CCAGCTATAAGTAGGCCGCC 60.037 60.000 0.00 0.00 0.00 6.13
4002 5005 0.969894 CAGCTATAAGTAGGCCGCCT 59.030 55.000 18.05 18.05 37.71 5.52
4003 5006 0.969894 AGCTATAAGTAGGCCGCCTG 59.030 55.000 22.95 4.16 34.61 4.85
4004 5007 0.966920 GCTATAAGTAGGCCGCCTGA 59.033 55.000 22.95 4.93 34.61 3.86
4005 5008 1.343465 GCTATAAGTAGGCCGCCTGAA 59.657 52.381 22.95 0.00 34.61 3.02
4006 5009 2.224209 GCTATAAGTAGGCCGCCTGAAA 60.224 50.000 22.95 5.15 34.61 2.69
4007 5010 3.743269 GCTATAAGTAGGCCGCCTGAAAA 60.743 47.826 22.95 5.53 34.61 2.29
4008 5011 3.577805 ATAAGTAGGCCGCCTGAAAAT 57.422 42.857 22.95 7.67 34.61 1.82
4009 5012 2.215942 AAGTAGGCCGCCTGAAAATT 57.784 45.000 22.95 4.79 34.61 1.82
4010 5013 2.215942 AGTAGGCCGCCTGAAAATTT 57.784 45.000 22.95 0.00 34.61 1.82
4011 5014 3.359695 AGTAGGCCGCCTGAAAATTTA 57.640 42.857 22.95 0.00 34.61 1.40
4012 5015 3.898482 AGTAGGCCGCCTGAAAATTTAT 58.102 40.909 22.95 0.00 34.61 1.40
4013 5016 4.278310 AGTAGGCCGCCTGAAAATTTATT 58.722 39.130 22.95 0.00 34.61 1.40
4014 5017 4.709886 AGTAGGCCGCCTGAAAATTTATTT 59.290 37.500 22.95 0.00 34.61 1.40
4015 5018 4.123497 AGGCCGCCTGAAAATTTATTTC 57.877 40.909 12.38 0.00 29.57 2.17
4016 5019 3.513515 AGGCCGCCTGAAAATTTATTTCA 59.486 39.130 12.38 3.84 36.98 2.69
4035 5038 9.713713 TTATTTCAGGTAAGTTAAATTTTGGGC 57.286 29.630 0.00 0.00 0.00 5.36
4036 5039 5.731957 TCAGGTAAGTTAAATTTTGGGCC 57.268 39.130 0.00 0.00 0.00 5.80
4037 5040 4.218852 TCAGGTAAGTTAAATTTTGGGCCG 59.781 41.667 0.00 0.00 0.00 6.13
4038 5041 4.021807 CAGGTAAGTTAAATTTTGGGCCGT 60.022 41.667 0.00 0.00 0.00 5.68
4039 5042 4.589798 AGGTAAGTTAAATTTTGGGCCGTT 59.410 37.500 0.00 0.00 0.00 4.44
4040 5043 4.925054 GGTAAGTTAAATTTTGGGCCGTTC 59.075 41.667 0.00 0.00 0.00 3.95
4041 5044 3.291809 AGTTAAATTTTGGGCCGTTCG 57.708 42.857 0.00 0.00 0.00 3.95
4042 5045 2.885894 AGTTAAATTTTGGGCCGTTCGA 59.114 40.909 0.00 0.00 0.00 3.71
4043 5046 3.508402 AGTTAAATTTTGGGCCGTTCGAT 59.492 39.130 0.00 0.00 0.00 3.59
4044 5047 4.021807 AGTTAAATTTTGGGCCGTTCGATT 60.022 37.500 0.00 0.00 0.00 3.34
4045 5048 2.362169 AATTTTGGGCCGTTCGATTG 57.638 45.000 0.00 0.00 0.00 2.67
4046 5049 1.540267 ATTTTGGGCCGTTCGATTGA 58.460 45.000 0.00 0.00 0.00 2.57
4047 5050 0.878416 TTTTGGGCCGTTCGATTGAG 59.122 50.000 0.00 0.00 0.00 3.02
4048 5051 0.035598 TTTGGGCCGTTCGATTGAGA 59.964 50.000 0.00 0.00 0.00 3.27
4049 5052 0.251916 TTGGGCCGTTCGATTGAGAT 59.748 50.000 0.00 0.00 0.00 2.75
4050 5053 0.179084 TGGGCCGTTCGATTGAGATC 60.179 55.000 0.00 0.00 0.00 2.75
4051 5054 0.880718 GGGCCGTTCGATTGAGATCC 60.881 60.000 0.00 0.00 0.00 3.36
4052 5055 0.179084 GGCCGTTCGATTGAGATCCA 60.179 55.000 0.00 0.00 0.00 3.41
4053 5056 1.651987 GCCGTTCGATTGAGATCCAA 58.348 50.000 0.00 0.00 39.41 3.53
4055 5058 2.032549 GCCGTTCGATTGAGATCCAATG 60.033 50.000 12.41 6.92 45.00 2.82
4056 5059 2.545526 CCGTTCGATTGAGATCCAATGG 59.454 50.000 12.41 11.42 45.00 3.16
4057 5060 2.032549 CGTTCGATTGAGATCCAATGGC 60.033 50.000 12.41 1.67 45.00 4.40
4058 5061 2.260844 TCGATTGAGATCCAATGGCC 57.739 50.000 12.41 0.00 45.00 5.36
4059 5062 1.202806 TCGATTGAGATCCAATGGCCC 60.203 52.381 12.41 0.00 45.00 5.80
4060 5063 1.202855 CGATTGAGATCCAATGGCCCT 60.203 52.381 12.41 0.00 45.00 5.19
4061 5064 2.512705 GATTGAGATCCAATGGCCCTC 58.487 52.381 12.41 11.87 45.00 4.30
4062 5065 0.552848 TTGAGATCCAATGGCCCTCC 59.447 55.000 14.78 2.59 0.00 4.30
4063 5066 0.327867 TGAGATCCAATGGCCCTCCT 60.328 55.000 14.78 0.00 0.00 3.69
4064 5067 0.849417 GAGATCCAATGGCCCTCCTT 59.151 55.000 0.00 0.00 0.00 3.36
4065 5068 0.849417 AGATCCAATGGCCCTCCTTC 59.151 55.000 0.00 0.00 0.00 3.46
4066 5069 0.849417 GATCCAATGGCCCTCCTTCT 59.151 55.000 0.00 0.00 0.00 2.85
4067 5070 1.216427 GATCCAATGGCCCTCCTTCTT 59.784 52.381 0.00 0.00 0.00 2.52
4068 5071 1.084018 TCCAATGGCCCTCCTTCTTT 58.916 50.000 0.00 0.00 0.00 2.52
4069 5072 1.005924 TCCAATGGCCCTCCTTCTTTC 59.994 52.381 0.00 0.00 0.00 2.62
4070 5073 1.006400 CCAATGGCCCTCCTTCTTTCT 59.994 52.381 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.951094 TCCTTTCTTTTCCCTTTTGAACGA 59.049 37.500 0.00 0.00 0.00 3.85
31 32 5.041287 GTCCTTTCTTTTCCCTTTTGAACG 58.959 41.667 0.00 0.00 0.00 3.95
32 33 5.810587 GTGTCCTTTCTTTTCCCTTTTGAAC 59.189 40.000 0.00 0.00 0.00 3.18
33 34 5.482175 TGTGTCCTTTCTTTTCCCTTTTGAA 59.518 36.000 0.00 0.00 0.00 2.69
35 36 5.337578 TGTGTCCTTTCTTTTCCCTTTTG 57.662 39.130 0.00 0.00 0.00 2.44
72 73 4.202264 ACCTATACATTTCTTGCTAGCGCT 60.202 41.667 17.26 17.26 36.97 5.92
119 120 6.819146 AGTAGCTTCTACAGTGCCTTTATTTC 59.181 38.462 0.00 0.00 0.00 2.17
338 345 3.010027 TGAAATTAGCATCACACTGGGGA 59.990 43.478 0.00 0.00 0.00 4.81
360 367 6.349033 GCCCTGTGACAAAGACGTATAAATTT 60.349 38.462 0.00 0.00 0.00 1.82
471 654 6.872547 TCTGATCAGCATGCAGTTATCTTATC 59.127 38.462 21.98 9.34 34.76 1.75
477 660 4.815308 GTCTTCTGATCAGCATGCAGTTAT 59.185 41.667 21.98 7.13 34.76 1.89
478 661 4.081254 AGTCTTCTGATCAGCATGCAGTTA 60.081 41.667 21.98 1.80 34.76 2.24
479 662 3.008330 GTCTTCTGATCAGCATGCAGTT 58.992 45.455 21.98 6.95 34.76 3.16
481 664 2.907634 AGTCTTCTGATCAGCATGCAG 58.092 47.619 21.98 12.90 34.76 4.41
482 665 3.345508 AAGTCTTCTGATCAGCATGCA 57.654 42.857 21.98 0.00 34.76 3.96
483 666 5.808042 TTTAAGTCTTCTGATCAGCATGC 57.192 39.130 18.36 10.51 34.76 4.06
484 667 8.037382 TCTTTTTAAGTCTTCTGATCAGCATG 57.963 34.615 18.36 10.01 37.54 4.06
485 668 8.675504 CATCTTTTTAAGTCTTCTGATCAGCAT 58.324 33.333 18.36 0.00 0.00 3.79
504 689 8.913487 AATTTTCTTCAATCTTGGCATCTTTT 57.087 26.923 0.00 0.00 0.00 2.27
533 718 6.126768 TGGATCGGAGGAAGTATGAGATTTTT 60.127 38.462 0.00 0.00 0.00 1.94
538 723 3.595190 TGGATCGGAGGAAGTATGAGA 57.405 47.619 0.00 0.00 0.00 3.27
545 730 9.736023 CTTAATTTTATTTTGGATCGGAGGAAG 57.264 33.333 0.00 0.00 0.00 3.46
547 732 8.817092 ACTTAATTTTATTTTGGATCGGAGGA 57.183 30.769 0.00 0.00 0.00 3.71
590 994 6.563567 GCGTAGTTTTGAACCAACTCTAGTTC 60.564 42.308 0.00 0.00 42.20 3.01
601 1005 0.589708 AAGCGGCGTAGTTTTGAACC 59.410 50.000 9.37 0.00 0.00 3.62
667 1090 2.298729 GGTGCAAGCCCAGTGAATTTTA 59.701 45.455 0.00 0.00 0.00 1.52
671 1100 4.102113 GGTGCAAGCCCAGTGAAT 57.898 55.556 0.00 0.00 0.00 2.57
685 1114 6.767902 AGTATTGCTATGATACAACAAGGGTG 59.232 38.462 0.00 0.00 33.43 4.61
727 1162 9.815306 TCAAACAGATATTCTAGGAGCTACTAT 57.185 33.333 6.01 0.00 0.00 2.12
799 1234 3.915346 AAATGGGAAAAGGGGTGTAGT 57.085 42.857 0.00 0.00 0.00 2.73
940 1381 2.948889 TTTGAGAGAGAGATGGGGGA 57.051 50.000 0.00 0.00 0.00 4.81
941 1382 4.230455 AGTATTTGAGAGAGAGATGGGGG 58.770 47.826 0.00 0.00 0.00 5.40
944 1385 4.283212 GGGGAGTATTTGAGAGAGAGATGG 59.717 50.000 0.00 0.00 0.00 3.51
946 1387 5.149584 TGGGGAGTATTTGAGAGAGAGAT 57.850 43.478 0.00 0.00 0.00 2.75
947 1388 4.609866 TGGGGAGTATTTGAGAGAGAGA 57.390 45.455 0.00 0.00 0.00 3.10
949 1390 3.389329 GCATGGGGAGTATTTGAGAGAGA 59.611 47.826 0.00 0.00 0.00 3.10
1146 1590 3.671410 TTGTGCTGGGGATGGGGG 61.671 66.667 0.00 0.00 0.00 5.40
1752 2647 6.709846 GGTAGGTACTGGTAGATGTGTACTAG 59.290 46.154 0.00 0.19 41.52 2.57
1753 2648 6.409695 GGGTAGGTACTGGTAGATGTGTACTA 60.410 46.154 0.00 0.00 41.52 1.82
1754 2649 5.444176 GGTAGGTACTGGTAGATGTGTACT 58.556 45.833 0.00 0.00 41.52 2.73
1815 2718 1.970917 GCCGGACTGAATTGACTGCG 61.971 60.000 5.05 0.00 0.00 5.18
2025 2934 1.480205 CAACAACCTTTCTGCAAGCG 58.520 50.000 0.00 0.00 0.00 4.68
2072 2981 4.608774 AAAGGCAGGGCAGCAGCA 62.609 61.111 2.65 0.00 44.61 4.41
2228 3137 4.269183 TCAAAAGACTGGCTCAAGAAACA 58.731 39.130 0.00 0.00 0.00 2.83
2240 3150 2.234908 ACCGATCCTCCTCAAAAGACTG 59.765 50.000 0.00 0.00 0.00 3.51
2243 3153 1.476891 CGACCGATCCTCCTCAAAAGA 59.523 52.381 0.00 0.00 0.00 2.52
2260 3182 0.109272 TTGACTCCACTGCGATCGAC 60.109 55.000 21.57 10.98 0.00 4.20
2348 3271 2.109799 CATGCAGCGGGGGAGTAG 59.890 66.667 0.00 0.00 0.00 2.57
2349 3272 2.364973 TCATGCAGCGGGGGAGTA 60.365 61.111 0.00 0.00 0.00 2.59
2350 3273 3.790437 CTCATGCAGCGGGGGAGT 61.790 66.667 0.00 0.00 0.00 3.85
2351 3274 3.790437 ACTCATGCAGCGGGGGAG 61.790 66.667 0.00 0.00 0.00 4.30
2352 3275 4.100084 CACTCATGCAGCGGGGGA 62.100 66.667 0.00 0.00 0.00 4.81
2414 3348 2.011947 GTACTAATGGTGTTTCCGGGC 58.988 52.381 0.00 0.00 39.52 6.13
2436 3370 2.686405 CACATGCACACCTAATCATGCT 59.314 45.455 0.00 0.00 39.75 3.79
2438 3372 3.074504 GCACATGCACACCTAATCATG 57.925 47.619 0.00 0.00 41.35 3.07
2501 3440 4.748892 TGTTATGAAGTCTGAGTGCTAGC 58.251 43.478 8.10 8.10 0.00 3.42
2534 3475 2.486982 AGCAGTGAATCATGCAACTGTC 59.513 45.455 13.85 7.67 45.01 3.51
2539 3480 3.151554 AGTTCAGCAGTGAATCATGCAA 58.848 40.909 15.95 4.38 44.58 4.08
2575 3522 7.811282 TGGCAGATACCTAGAATTTTGGATTA 58.189 34.615 0.00 0.00 0.00 1.75
2579 3526 5.829924 ACATGGCAGATACCTAGAATTTTGG 59.170 40.000 0.00 0.00 0.00 3.28
2581 3528 7.631377 GCAAACATGGCAGATACCTAGAATTTT 60.631 37.037 0.00 0.00 0.00 1.82
2603 3556 2.773487 AGTACCAGTACGCAATGCAAA 58.227 42.857 5.91 0.00 40.80 3.68
2629 3588 1.869690 GACTCGACCTTGCTTTGGC 59.130 57.895 0.00 0.00 39.26 4.52
2630 3589 0.319555 TCGACTCGACCTTGCTTTGG 60.320 55.000 0.00 0.00 0.00 3.28
2631 3590 1.714794 ATCGACTCGACCTTGCTTTG 58.285 50.000 2.53 0.00 39.18 2.77
2632 3591 2.069273 CAATCGACTCGACCTTGCTTT 58.931 47.619 2.53 0.00 39.18 3.51
2633 3592 1.000955 ACAATCGACTCGACCTTGCTT 59.999 47.619 12.61 0.00 39.18 3.91
2634 3593 0.603569 ACAATCGACTCGACCTTGCT 59.396 50.000 12.61 1.43 39.18 3.91
2635 3594 1.126846 CAACAATCGACTCGACCTTGC 59.873 52.381 12.61 0.00 39.18 4.01
2640 3599 2.668457 AGCATTCAACAATCGACTCGAC 59.332 45.455 2.53 0.00 39.18 4.20
2642 3601 4.840401 TTAGCATTCAACAATCGACTCG 57.160 40.909 0.00 0.00 0.00 4.18
2645 3604 8.765219 AGTATACATTAGCATTCAACAATCGAC 58.235 33.333 5.50 0.00 0.00 4.20
2698 3661 1.073722 CCTGCAGCCTTTCAGTCCA 59.926 57.895 8.66 0.00 0.00 4.02
3082 4051 6.183360 ACAAGATATATATCGTGCCGATCGAA 60.183 38.462 28.09 0.77 43.45 3.71
3121 4091 1.000060 GACCATGCAAGCAAAGCAGAA 60.000 47.619 0.00 0.00 46.36 3.02
3261 4235 3.555547 CGCATCACCATCGTCTTCAATAA 59.444 43.478 0.00 0.00 0.00 1.40
3264 4238 1.358877 CGCATCACCATCGTCTTCAA 58.641 50.000 0.00 0.00 0.00 2.69
3284 4258 3.706698 TCGATCGATCCATGACTCAAAC 58.293 45.455 19.51 0.00 0.00 2.93
3312 4292 2.169769 ACACGTACCCCCACTATTCATG 59.830 50.000 0.00 0.00 0.00 3.07
3379 4363 7.980099 AGAATACCAAAGGTACTATTCAACTCG 59.020 37.037 10.93 0.00 41.31 4.18
3458 4459 2.203337 GGCCAACACTGCCTCACA 60.203 61.111 0.00 0.00 45.70 3.58
3466 4467 0.107116 TACAACAACGGGCCAACACT 60.107 50.000 4.39 0.00 0.00 3.55
3473 4476 4.035909 CCATTAACCTATACAACAACGGGC 59.964 45.833 0.00 0.00 0.00 6.13
3474 4477 5.065474 CACCATTAACCTATACAACAACGGG 59.935 44.000 0.00 0.00 0.00 5.28
3539 4542 7.096884 ACGCTTAGTATGTCATAGTCTTCAA 57.903 36.000 3.34 0.00 0.00 2.69
3548 4551 3.243401 TGCATCGACGCTTAGTATGTCAT 60.243 43.478 4.63 0.00 32.91 3.06
3558 4561 0.723414 CAACTGATGCATCGACGCTT 59.277 50.000 21.34 0.00 0.00 4.68
3569 4572 0.747283 GAGCCCTGGAGCAACTGATG 60.747 60.000 9.36 0.00 34.23 3.07
3570 4573 1.203441 TGAGCCCTGGAGCAACTGAT 61.203 55.000 9.36 0.00 34.23 2.90
3571 4574 1.418097 TTGAGCCCTGGAGCAACTGA 61.418 55.000 9.36 0.00 34.23 3.41
3572 4575 0.323178 ATTGAGCCCTGGAGCAACTG 60.323 55.000 9.36 0.00 34.23 3.16
3573 4576 0.323178 CATTGAGCCCTGGAGCAACT 60.323 55.000 9.36 0.00 34.23 3.16
3574 4577 1.941999 GCATTGAGCCCTGGAGCAAC 61.942 60.000 9.36 4.43 37.23 4.17
3575 4578 1.679977 GCATTGAGCCCTGGAGCAA 60.680 57.895 9.36 4.56 37.23 3.91
3576 4579 2.044650 GCATTGAGCCCTGGAGCA 60.045 61.111 9.36 0.00 37.23 4.26
3585 4588 1.581147 GCGCGTGTTAGCATTGAGC 60.581 57.895 8.43 0.00 46.19 4.26
3586 4589 1.787215 TGCGCGTGTTAGCATTGAG 59.213 52.632 8.43 0.00 38.59 3.02
3587 4590 3.958748 TGCGCGTGTTAGCATTGA 58.041 50.000 8.43 0.00 38.59 2.57
3592 4595 0.168128 AAAAGGATGCGCGTGTTAGC 59.832 50.000 6.97 0.00 0.00 3.09
3593 4596 2.241722 CAAAAAGGATGCGCGTGTTAG 58.758 47.619 6.97 0.00 0.00 2.34
3594 4597 1.604755 ACAAAAAGGATGCGCGTGTTA 59.395 42.857 6.97 0.00 0.00 2.41
3595 4598 0.383949 ACAAAAAGGATGCGCGTGTT 59.616 45.000 6.97 0.00 0.00 3.32
3596 4599 1.231221 TACAAAAAGGATGCGCGTGT 58.769 45.000 6.97 2.90 0.00 4.49
3597 4600 2.176369 CATACAAAAAGGATGCGCGTG 58.824 47.619 6.97 0.00 0.00 5.34
3598 4601 1.810151 ACATACAAAAAGGATGCGCGT 59.190 42.857 8.43 0.00 0.00 6.01
3599 4602 2.542766 ACATACAAAAAGGATGCGCG 57.457 45.000 0.00 0.00 0.00 6.86
3600 4603 4.616181 ACTACATACAAAAAGGATGCGC 57.384 40.909 0.00 0.00 0.00 6.09
3601 4604 8.958175 TTTTTACTACATACAAAAAGGATGCG 57.042 30.769 0.00 0.00 30.08 4.73
3612 4615 9.169592 GGGAGTAAGCAATTTTTACTACATACA 57.830 33.333 17.53 0.00 41.66 2.29
3613 4616 9.392259 AGGGAGTAAGCAATTTTTACTACATAC 57.608 33.333 17.53 6.43 41.66 2.39
3614 4617 9.609346 GAGGGAGTAAGCAATTTTTACTACATA 57.391 33.333 17.53 0.00 41.66 2.29
3615 4618 7.556635 GGAGGGAGTAAGCAATTTTTACTACAT 59.443 37.037 17.53 13.20 41.66 2.29
3616 4619 6.882678 GGAGGGAGTAAGCAATTTTTACTACA 59.117 38.462 17.53 0.00 41.66 2.74
3617 4620 7.110810 AGGAGGGAGTAAGCAATTTTTACTAC 58.889 38.462 11.16 11.16 40.46 2.73
3618 4621 7.266905 AGGAGGGAGTAAGCAATTTTTACTA 57.733 36.000 10.58 0.00 40.46 1.82
3619 4622 6.140968 AGGAGGGAGTAAGCAATTTTTACT 57.859 37.500 10.45 10.45 42.43 2.24
3620 4623 6.127703 GGAAGGAGGGAGTAAGCAATTTTTAC 60.128 42.308 0.00 2.70 0.00 2.01
3621 4624 5.949952 GGAAGGAGGGAGTAAGCAATTTTTA 59.050 40.000 0.00 0.00 0.00 1.52
3622 4625 4.772624 GGAAGGAGGGAGTAAGCAATTTTT 59.227 41.667 0.00 0.00 0.00 1.94
3623 4626 4.202673 TGGAAGGAGGGAGTAAGCAATTTT 60.203 41.667 0.00 0.00 0.00 1.82
3624 4627 3.333680 TGGAAGGAGGGAGTAAGCAATTT 59.666 43.478 0.00 0.00 0.00 1.82
3625 4628 2.919602 TGGAAGGAGGGAGTAAGCAATT 59.080 45.455 0.00 0.00 0.00 2.32
3626 4629 2.562296 TGGAAGGAGGGAGTAAGCAAT 58.438 47.619 0.00 0.00 0.00 3.56
3627 4630 2.038863 TGGAAGGAGGGAGTAAGCAA 57.961 50.000 0.00 0.00 0.00 3.91
3628 4631 2.119495 GATGGAAGGAGGGAGTAAGCA 58.881 52.381 0.00 0.00 0.00 3.91
3629 4632 2.403561 AGATGGAAGGAGGGAGTAAGC 58.596 52.381 0.00 0.00 0.00 3.09
3630 4633 7.782644 CCTATATAGATGGAAGGAGGGAGTAAG 59.217 44.444 11.53 0.00 0.00 2.34
3631 4634 7.313276 CCCTATATAGATGGAAGGAGGGAGTAA 60.313 44.444 11.53 0.00 44.48 2.24
3632 4635 6.162420 CCCTATATAGATGGAAGGAGGGAGTA 59.838 46.154 11.53 0.00 44.48 2.59
3633 4636 5.042979 CCCTATATAGATGGAAGGAGGGAGT 60.043 48.000 11.53 0.00 44.48 3.85
3634 4637 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
3635 4638 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
3636 4639 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
3637 4640 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
3638 4641 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
3639 4642 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
3640 4643 6.465035 GCATTAGGCCCTATATAGATGGAAGG 60.465 46.154 11.53 3.94 36.11 3.46
3641 4644 6.529220 GCATTAGGCCCTATATAGATGGAAG 58.471 44.000 11.53 0.00 36.11 3.46
3642 4645 5.070446 CGCATTAGGCCCTATATAGATGGAA 59.930 44.000 11.53 0.00 40.31 3.53
3643 4646 4.588951 CGCATTAGGCCCTATATAGATGGA 59.411 45.833 11.53 0.00 40.31 3.41
3644 4647 4.345257 ACGCATTAGGCCCTATATAGATGG 59.655 45.833 11.53 6.04 40.31 3.51
3645 4648 5.537300 ACGCATTAGGCCCTATATAGATG 57.463 43.478 11.53 6.87 40.31 2.90
3646 4649 6.561519 AAACGCATTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 40.31 1.98
3647 4650 6.368779 AAAACGCATTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 40.31 1.98
3668 4671 8.234546 GTCAATAGTCAAAGGCGATCTTAAAAA 58.765 33.333 0.00 0.00 34.78 1.94
3669 4672 7.389330 TGTCAATAGTCAAAGGCGATCTTAAAA 59.611 33.333 0.00 0.00 34.78 1.52
3670 4673 6.876789 TGTCAATAGTCAAAGGCGATCTTAAA 59.123 34.615 0.00 0.00 34.78 1.52
3671 4674 6.403049 TGTCAATAGTCAAAGGCGATCTTAA 58.597 36.000 0.00 0.00 34.78 1.85
3672 4675 5.972935 TGTCAATAGTCAAAGGCGATCTTA 58.027 37.500 0.00 0.00 34.78 2.10
3673 4676 4.832248 TGTCAATAGTCAAAGGCGATCTT 58.168 39.130 0.00 0.00 37.28 2.40
3674 4677 4.471904 TGTCAATAGTCAAAGGCGATCT 57.528 40.909 0.00 0.00 0.00 2.75
3675 4678 4.870426 TCTTGTCAATAGTCAAAGGCGATC 59.130 41.667 0.00 0.00 0.00 3.69
3676 4679 4.832248 TCTTGTCAATAGTCAAAGGCGAT 58.168 39.130 0.00 0.00 0.00 4.58
3677 4680 4.265904 TCTTGTCAATAGTCAAAGGCGA 57.734 40.909 0.00 0.00 0.00 5.54
3678 4681 5.551760 AATCTTGTCAATAGTCAAAGGCG 57.448 39.130 0.00 0.00 0.00 5.52
3740 4743 5.803020 ATTCGTGTATGAAAGGAGCTTTC 57.197 39.130 0.00 0.00 46.88 2.62
3741 4744 6.575162 AAATTCGTGTATGAAAGGAGCTTT 57.425 33.333 0.00 0.00 36.29 3.51
3742 4745 7.527457 GTTAAATTCGTGTATGAAAGGAGCTT 58.473 34.615 0.00 0.00 0.00 3.74
3743 4746 6.183360 CGTTAAATTCGTGTATGAAAGGAGCT 60.183 38.462 0.00 0.00 0.00 4.09
3744 4747 5.957796 CGTTAAATTCGTGTATGAAAGGAGC 59.042 40.000 0.00 0.00 0.00 4.70
3745 4748 6.091713 ACCGTTAAATTCGTGTATGAAAGGAG 59.908 38.462 0.00 0.00 0.00 3.69
3746 4749 5.933463 ACCGTTAAATTCGTGTATGAAAGGA 59.067 36.000 0.00 0.00 0.00 3.36
3747 4750 6.019152 CACCGTTAAATTCGTGTATGAAAGG 58.981 40.000 0.00 0.00 0.00 3.11
3748 4751 6.518395 CACACCGTTAAATTCGTGTATGAAAG 59.482 38.462 0.00 0.00 0.00 2.62
3749 4752 6.364261 CACACCGTTAAATTCGTGTATGAAA 58.636 36.000 0.00 0.00 0.00 2.69
3750 4753 5.615106 GCACACCGTTAAATTCGTGTATGAA 60.615 40.000 0.00 0.00 0.00 2.57
3751 4754 4.143073 GCACACCGTTAAATTCGTGTATGA 60.143 41.667 0.00 0.00 0.00 2.15
3752 4755 4.085884 GCACACCGTTAAATTCGTGTATG 58.914 43.478 0.00 0.00 0.00 2.39
3753 4756 3.998341 AGCACACCGTTAAATTCGTGTAT 59.002 39.130 0.00 0.00 0.00 2.29
3754 4757 3.391965 AGCACACCGTTAAATTCGTGTA 58.608 40.909 0.00 0.00 0.00 2.90
3755 4758 2.215196 AGCACACCGTTAAATTCGTGT 58.785 42.857 0.00 0.00 0.00 4.49
3756 4759 2.961522 AGCACACCGTTAAATTCGTG 57.038 45.000 0.00 0.00 0.00 4.35
3757 4760 3.065648 ACAAAGCACACCGTTAAATTCGT 59.934 39.130 0.00 0.00 0.00 3.85
3758 4761 3.420576 CACAAAGCACACCGTTAAATTCG 59.579 43.478 0.00 0.00 0.00 3.34
3759 4762 4.356289 ACACAAAGCACACCGTTAAATTC 58.644 39.130 0.00 0.00 0.00 2.17
3760 4763 4.379339 ACACAAAGCACACCGTTAAATT 57.621 36.364 0.00 0.00 0.00 1.82
3761 4764 5.066764 ACTTACACAAAGCACACCGTTAAAT 59.933 36.000 0.00 0.00 38.93 1.40
3762 4765 4.395542 ACTTACACAAAGCACACCGTTAAA 59.604 37.500 0.00 0.00 38.93 1.52
3763 4766 3.940221 ACTTACACAAAGCACACCGTTAA 59.060 39.130 0.00 0.00 38.93 2.01
3764 4767 3.533547 ACTTACACAAAGCACACCGTTA 58.466 40.909 0.00 0.00 38.93 3.18
3765 4768 2.361789 ACTTACACAAAGCACACCGTT 58.638 42.857 0.00 0.00 38.93 4.44
3766 4769 2.032680 ACTTACACAAAGCACACCGT 57.967 45.000 0.00 0.00 38.93 4.83
3767 4770 2.715268 CAACTTACACAAAGCACACCG 58.285 47.619 0.00 0.00 38.93 4.94
3768 4771 2.159310 TGCAACTTACACAAAGCACACC 60.159 45.455 0.00 0.00 38.93 4.16
3769 4772 3.143807 TGCAACTTACACAAAGCACAC 57.856 42.857 0.00 0.00 38.93 3.82
3770 4773 3.130164 ACATGCAACTTACACAAAGCACA 59.870 39.130 0.00 0.00 38.93 4.57
3771 4774 3.705604 ACATGCAACTTACACAAAGCAC 58.294 40.909 0.00 0.00 38.93 4.40
3772 4775 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
3773 4776 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
3782 4785 9.293404 AGAGCAATAATATATGACATGCAACTT 57.707 29.630 10.78 0.00 34.89 2.66
3783 4786 8.859236 AGAGCAATAATATATGACATGCAACT 57.141 30.769 10.78 7.52 34.89 3.16
3802 4805 9.801873 GCTAATTTTGACCAAATATTAGAGCAA 57.198 29.630 23.05 0.00 35.84 3.91
3803 4806 8.413229 GGCTAATTTTGACCAAATATTAGAGCA 58.587 33.333 23.05 2.88 35.84 4.26
3804 4807 8.633561 AGGCTAATTTTGACCAAATATTAGAGC 58.366 33.333 23.05 17.34 35.84 4.09
3806 4809 8.836413 CGAGGCTAATTTTGACCAAATATTAGA 58.164 33.333 23.05 4.36 35.84 2.10
3807 4810 8.836413 TCGAGGCTAATTTTGACCAAATATTAG 58.164 33.333 19.23 19.23 33.60 1.73
3808 4811 8.740123 TCGAGGCTAATTTTGACCAAATATTA 57.260 30.769 0.00 3.99 33.60 0.98
3809 4812 7.639113 TCGAGGCTAATTTTGACCAAATATT 57.361 32.000 0.00 3.18 33.60 1.28
3810 4813 7.639113 TTCGAGGCTAATTTTGACCAAATAT 57.361 32.000 0.00 0.00 33.60 1.28
3811 4814 7.455641 TTTCGAGGCTAATTTTGACCAAATA 57.544 32.000 0.00 0.00 33.60 1.40
3812 4815 5.975693 TTCGAGGCTAATTTTGACCAAAT 57.024 34.783 0.00 0.00 36.57 2.32
3813 4816 5.776173 TTTCGAGGCTAATTTTGACCAAA 57.224 34.783 0.00 0.00 0.00 3.28
3814 4817 5.776173 TTTTCGAGGCTAATTTTGACCAA 57.224 34.783 0.00 0.00 0.00 3.67
3815 4818 5.776173 TTTTTCGAGGCTAATTTTGACCA 57.224 34.783 0.00 0.00 0.00 4.02
3816 4819 5.062183 GCATTTTTCGAGGCTAATTTTGACC 59.938 40.000 0.00 0.00 0.00 4.02
3817 4820 5.633182 TGCATTTTTCGAGGCTAATTTTGAC 59.367 36.000 0.00 0.00 0.00 3.18
3818 4821 5.777802 TGCATTTTTCGAGGCTAATTTTGA 58.222 33.333 0.00 0.00 0.00 2.69
3819 4822 6.651755 ATGCATTTTTCGAGGCTAATTTTG 57.348 33.333 0.00 0.00 0.00 2.44
3820 4823 7.492344 CCTAATGCATTTTTCGAGGCTAATTTT 59.508 33.333 18.75 0.00 0.00 1.82
3821 4824 6.980397 CCTAATGCATTTTTCGAGGCTAATTT 59.020 34.615 18.75 0.00 0.00 1.82
3822 4825 6.507023 CCTAATGCATTTTTCGAGGCTAATT 58.493 36.000 18.75 0.00 0.00 1.40
3823 4826 5.507985 GCCTAATGCATTTTTCGAGGCTAAT 60.508 40.000 30.34 3.45 43.77 1.73
3824 4827 4.202010 GCCTAATGCATTTTTCGAGGCTAA 60.202 41.667 30.34 6.47 43.77 3.09
3825 4828 3.315191 GCCTAATGCATTTTTCGAGGCTA 59.685 43.478 30.34 6.91 43.77 3.93
3826 4829 2.099756 GCCTAATGCATTTTTCGAGGCT 59.900 45.455 30.34 4.50 43.77 4.58
3827 4830 2.463876 GCCTAATGCATTTTTCGAGGC 58.536 47.619 26.43 26.43 41.09 4.70
3828 4831 2.223805 GGGCCTAATGCATTTTTCGAGG 60.224 50.000 18.75 17.98 43.89 4.63
3829 4832 2.689983 AGGGCCTAATGCATTTTTCGAG 59.310 45.455 18.75 8.21 43.89 4.04
3830 4833 2.733956 AGGGCCTAATGCATTTTTCGA 58.266 42.857 18.75 0.00 43.89 3.71
3831 4834 4.853924 ATAGGGCCTAATGCATTTTTCG 57.146 40.909 18.91 3.96 43.89 3.46
3834 4837 8.761689 CCATTTATATAGGGCCTAATGCATTTT 58.238 33.333 18.91 0.30 43.89 1.82
3835 4838 8.121833 TCCATTTATATAGGGCCTAATGCATTT 58.878 33.333 18.91 1.12 43.89 2.32
3836 4839 7.651607 TCCATTTATATAGGGCCTAATGCATT 58.348 34.615 18.91 17.56 43.89 3.56
3837 4840 7.224765 TCCATTTATATAGGGCCTAATGCAT 57.775 36.000 18.91 10.87 43.89 3.96
3838 4841 6.650622 TCCATTTATATAGGGCCTAATGCA 57.349 37.500 18.91 0.94 43.89 3.96
3839 4842 6.547510 CCTTCCATTTATATAGGGCCTAATGC 59.452 42.308 18.91 0.00 40.16 3.56
3840 4843 7.872138 TCCTTCCATTTATATAGGGCCTAATG 58.128 38.462 18.91 17.12 0.00 1.90
3841 4844 7.129504 CCTCCTTCCATTTATATAGGGCCTAAT 59.870 40.741 18.91 14.19 0.00 1.73
3842 4845 6.447084 CCTCCTTCCATTTATATAGGGCCTAA 59.553 42.308 18.91 7.61 0.00 2.69
3843 4846 5.970640 CCTCCTTCCATTTATATAGGGCCTA 59.029 44.000 17.16 17.16 0.00 3.93
3844 4847 4.790790 CCTCCTTCCATTTATATAGGGCCT 59.209 45.833 12.58 12.58 0.00 5.19
3845 4848 4.079730 CCCTCCTTCCATTTATATAGGGCC 60.080 50.000 0.00 0.00 36.30 5.80
3846 4849 4.788617 TCCCTCCTTCCATTTATATAGGGC 59.211 45.833 0.00 0.00 41.88 5.19
3847 4850 6.032693 ACTCCCTCCTTCCATTTATATAGGG 58.967 44.000 0.00 0.00 43.23 3.53
3848 4851 7.901861 AGTACTCCCTCCTTCCATTTATATAGG 59.098 40.741 0.00 0.00 0.00 2.57
3849 4852 8.903059 AGTACTCCCTCCTTCCATTTATATAG 57.097 38.462 0.00 0.00 0.00 1.31
3851 4854 9.860393 AATAGTACTCCCTCCTTCCATTTATAT 57.140 33.333 0.00 0.00 0.00 0.86
3852 4855 9.101325 CAATAGTACTCCCTCCTTCCATTTATA 57.899 37.037 0.00 0.00 0.00 0.98
3853 4856 7.572861 ACAATAGTACTCCCTCCTTCCATTTAT 59.427 37.037 0.00 0.00 0.00 1.40
3854 4857 6.906901 ACAATAGTACTCCCTCCTTCCATTTA 59.093 38.462 0.00 0.00 0.00 1.40
3855 4858 5.731678 ACAATAGTACTCCCTCCTTCCATTT 59.268 40.000 0.00 0.00 0.00 2.32
3856 4859 5.289510 ACAATAGTACTCCCTCCTTCCATT 58.710 41.667 0.00 0.00 0.00 3.16
3857 4860 4.897051 ACAATAGTACTCCCTCCTTCCAT 58.103 43.478 0.00 0.00 0.00 3.41
3858 4861 4.287552 GACAATAGTACTCCCTCCTTCCA 58.712 47.826 0.00 0.00 0.00 3.53
3859 4862 3.318557 CGACAATAGTACTCCCTCCTTCC 59.681 52.174 0.00 0.00 0.00 3.46
3860 4863 4.205587 TCGACAATAGTACTCCCTCCTTC 58.794 47.826 0.00 0.00 0.00 3.46
3861 4864 4.246712 TCGACAATAGTACTCCCTCCTT 57.753 45.455 0.00 0.00 0.00 3.36
3862 4865 3.947612 TCGACAATAGTACTCCCTCCT 57.052 47.619 0.00 0.00 0.00 3.69
3863 4866 4.341520 ACAATCGACAATAGTACTCCCTCC 59.658 45.833 0.00 0.00 0.00 4.30
3864 4867 5.517322 ACAATCGACAATAGTACTCCCTC 57.483 43.478 0.00 0.00 0.00 4.30
3865 4868 5.934402 AACAATCGACAATAGTACTCCCT 57.066 39.130 0.00 0.00 0.00 4.20
3866 4869 6.103997 TCAAACAATCGACAATAGTACTCCC 58.896 40.000 0.00 0.00 0.00 4.30
3867 4870 7.591006 TTCAAACAATCGACAATAGTACTCC 57.409 36.000 0.00 0.00 0.00 3.85
3868 4871 8.709646 AGTTTCAAACAATCGACAATAGTACTC 58.290 33.333 0.00 0.00 0.00 2.59
3869 4872 8.603242 AGTTTCAAACAATCGACAATAGTACT 57.397 30.769 2.41 0.00 0.00 2.73
3870 4873 9.314501 GAAGTTTCAAACAATCGACAATAGTAC 57.685 33.333 2.41 0.00 0.00 2.73
3871 4874 9.047371 TGAAGTTTCAAACAATCGACAATAGTA 57.953 29.630 2.41 0.00 33.55 1.82
3872 4875 7.925993 TGAAGTTTCAAACAATCGACAATAGT 58.074 30.769 2.41 0.00 33.55 2.12
3873 4876 8.955061 ATGAAGTTTCAAACAATCGACAATAG 57.045 30.769 2.41 0.00 41.13 1.73
3875 4878 9.398170 CTTATGAAGTTTCAAACAATCGACAAT 57.602 29.630 2.41 0.00 41.13 2.71
3876 4879 8.616942 TCTTATGAAGTTTCAAACAATCGACAA 58.383 29.630 2.41 0.00 41.13 3.18
3877 4880 8.148807 TCTTATGAAGTTTCAAACAATCGACA 57.851 30.769 2.41 0.00 41.13 4.35
3878 4881 9.612620 ATTCTTATGAAGTTTCAAACAATCGAC 57.387 29.630 2.41 0.00 41.13 4.20
3905 4908 9.310716 GAAAAGGTACTATGTAGCGTAGATTTT 57.689 33.333 2.76 3.51 38.49 1.82
3906 4909 8.472413 TGAAAAGGTACTATGTAGCGTAGATTT 58.528 33.333 2.76 1.49 38.49 2.17
3907 4910 7.919621 GTGAAAAGGTACTATGTAGCGTAGATT 59.080 37.037 2.76 0.00 38.49 2.40
3908 4911 7.067859 TGTGAAAAGGTACTATGTAGCGTAGAT 59.932 37.037 2.76 0.00 38.49 1.98
3909 4912 6.375174 TGTGAAAAGGTACTATGTAGCGTAGA 59.625 38.462 2.76 0.00 38.49 2.59
3910 4913 6.558009 TGTGAAAAGGTACTATGTAGCGTAG 58.442 40.000 0.00 0.00 38.49 3.51
3911 4914 6.375174 TCTGTGAAAAGGTACTATGTAGCGTA 59.625 38.462 0.00 0.00 38.49 4.42
3912 4915 5.184479 TCTGTGAAAAGGTACTATGTAGCGT 59.816 40.000 0.00 0.00 38.49 5.07
3913 4916 5.515626 GTCTGTGAAAAGGTACTATGTAGCG 59.484 44.000 0.00 0.00 38.49 4.26
3914 4917 6.631962 AGTCTGTGAAAAGGTACTATGTAGC 58.368 40.000 0.00 0.00 38.49 3.58
3924 4927 9.213777 TCCTTGATATATAGTCTGTGAAAAGGT 57.786 33.333 0.00 0.00 32.85 3.50
3925 4928 9.703892 CTCCTTGATATATAGTCTGTGAAAAGG 57.296 37.037 0.00 0.00 0.00 3.11
3928 4931 9.421399 TGTCTCCTTGATATATAGTCTGTGAAA 57.579 33.333 0.00 0.00 0.00 2.69
3929 4932 8.996651 TGTCTCCTTGATATATAGTCTGTGAA 57.003 34.615 0.00 0.00 0.00 3.18
3930 4933 9.018582 CATGTCTCCTTGATATATAGTCTGTGA 57.981 37.037 0.00 0.00 0.00 3.58
3931 4934 8.801299 ACATGTCTCCTTGATATATAGTCTGTG 58.199 37.037 0.00 0.00 0.00 3.66
3932 4935 8.801299 CACATGTCTCCTTGATATATAGTCTGT 58.199 37.037 0.00 0.00 0.00 3.41
3933 4936 9.018582 TCACATGTCTCCTTGATATATAGTCTG 57.981 37.037 0.00 0.00 0.00 3.51
3934 4937 9.766754 ATCACATGTCTCCTTGATATATAGTCT 57.233 33.333 0.00 0.00 0.00 3.24
3936 4939 8.681806 CGATCACATGTCTCCTTGATATATAGT 58.318 37.037 0.00 0.00 0.00 2.12
3937 4940 8.134261 CCGATCACATGTCTCCTTGATATATAG 58.866 40.741 0.00 0.00 0.00 1.31
3938 4941 7.834181 TCCGATCACATGTCTCCTTGATATATA 59.166 37.037 0.00 0.00 0.00 0.86
3939 4942 6.665248 TCCGATCACATGTCTCCTTGATATAT 59.335 38.462 0.00 0.00 0.00 0.86
3940 4943 6.010219 TCCGATCACATGTCTCCTTGATATA 58.990 40.000 0.00 0.00 0.00 0.86
3941 4944 4.835056 TCCGATCACATGTCTCCTTGATAT 59.165 41.667 0.00 0.00 0.00 1.63
3942 4945 4.215109 TCCGATCACATGTCTCCTTGATA 58.785 43.478 0.00 0.00 0.00 2.15
3943 4946 3.033909 TCCGATCACATGTCTCCTTGAT 58.966 45.455 0.00 0.00 0.00 2.57
3944 4947 2.456577 TCCGATCACATGTCTCCTTGA 58.543 47.619 0.00 0.00 0.00 3.02
3945 4948 2.967599 TCCGATCACATGTCTCCTTG 57.032 50.000 0.00 0.00 0.00 3.61
3946 4949 4.494091 AATTCCGATCACATGTCTCCTT 57.506 40.909 0.00 0.00 0.00 3.36
3947 4950 4.651503 AGTAATTCCGATCACATGTCTCCT 59.348 41.667 0.00 0.00 0.00 3.69
3948 4951 4.950050 AGTAATTCCGATCACATGTCTCC 58.050 43.478 0.00 0.00 0.00 3.71
3949 4952 6.971602 TCTAGTAATTCCGATCACATGTCTC 58.028 40.000 0.00 0.00 0.00 3.36
3950 4953 6.961360 TCTAGTAATTCCGATCACATGTCT 57.039 37.500 0.00 0.00 0.00 3.41
3951 4954 8.491152 CATTTCTAGTAATTCCGATCACATGTC 58.509 37.037 0.00 0.00 0.00 3.06
3952 4955 7.442364 CCATTTCTAGTAATTCCGATCACATGT 59.558 37.037 0.00 0.00 0.00 3.21
3953 4956 7.095060 CCCATTTCTAGTAATTCCGATCACATG 60.095 40.741 0.00 0.00 0.00 3.21
3954 4957 6.936900 CCCATTTCTAGTAATTCCGATCACAT 59.063 38.462 0.00 0.00 0.00 3.21
3955 4958 6.288294 CCCATTTCTAGTAATTCCGATCACA 58.712 40.000 0.00 0.00 0.00 3.58
3956 4959 5.701290 CCCCATTTCTAGTAATTCCGATCAC 59.299 44.000 0.00 0.00 0.00 3.06
3957 4960 5.605069 TCCCCATTTCTAGTAATTCCGATCA 59.395 40.000 0.00 0.00 0.00 2.92
3958 4961 5.932883 GTCCCCATTTCTAGTAATTCCGATC 59.067 44.000 0.00 0.00 0.00 3.69
3959 4962 5.221864 GGTCCCCATTTCTAGTAATTCCGAT 60.222 44.000 0.00 0.00 0.00 4.18
3960 4963 4.102054 GGTCCCCATTTCTAGTAATTCCGA 59.898 45.833 0.00 0.00 0.00 4.55
3961 4964 4.141574 TGGTCCCCATTTCTAGTAATTCCG 60.142 45.833 0.00 0.00 0.00 4.30
3962 4965 5.377478 CTGGTCCCCATTTCTAGTAATTCC 58.623 45.833 0.00 0.00 30.82 3.01
3963 4966 4.822350 GCTGGTCCCCATTTCTAGTAATTC 59.178 45.833 0.00 0.00 30.82 2.17
3964 4967 4.478686 AGCTGGTCCCCATTTCTAGTAATT 59.521 41.667 0.00 0.00 30.82 1.40
3965 4968 4.047883 AGCTGGTCCCCATTTCTAGTAAT 58.952 43.478 0.00 0.00 30.82 1.89
3966 4969 3.460825 AGCTGGTCCCCATTTCTAGTAA 58.539 45.455 0.00 0.00 30.82 2.24
3967 4970 3.130734 AGCTGGTCCCCATTTCTAGTA 57.869 47.619 0.00 0.00 30.82 1.82
3968 4971 1.972588 AGCTGGTCCCCATTTCTAGT 58.027 50.000 0.00 0.00 30.82 2.57
3969 4972 5.308237 ACTTATAGCTGGTCCCCATTTCTAG 59.692 44.000 0.00 0.00 30.82 2.43
3970 4973 5.224441 ACTTATAGCTGGTCCCCATTTCTA 58.776 41.667 0.00 0.00 30.82 2.10
3971 4974 4.047883 ACTTATAGCTGGTCCCCATTTCT 58.952 43.478 0.00 0.00 30.82 2.52
3972 4975 4.439253 ACTTATAGCTGGTCCCCATTTC 57.561 45.455 0.00 0.00 30.82 2.17
3973 4976 4.351111 CCTACTTATAGCTGGTCCCCATTT 59.649 45.833 0.00 0.00 30.82 2.32
3974 4977 3.910627 CCTACTTATAGCTGGTCCCCATT 59.089 47.826 0.00 0.00 30.82 3.16
3975 4978 3.521727 CCTACTTATAGCTGGTCCCCAT 58.478 50.000 0.00 0.00 30.82 4.00
3976 4979 2.972348 CCTACTTATAGCTGGTCCCCA 58.028 52.381 0.00 0.00 0.00 4.96
3977 4980 1.624312 GCCTACTTATAGCTGGTCCCC 59.376 57.143 0.00 0.00 0.00 4.81
3978 4981 1.624312 GGCCTACTTATAGCTGGTCCC 59.376 57.143 0.00 0.00 0.00 4.46
3979 4982 1.272769 CGGCCTACTTATAGCTGGTCC 59.727 57.143 0.00 0.00 0.00 4.46
3980 4983 1.336980 GCGGCCTACTTATAGCTGGTC 60.337 57.143 0.00 0.00 0.00 4.02
3981 4984 0.680061 GCGGCCTACTTATAGCTGGT 59.320 55.000 0.00 0.00 0.00 4.00
3982 4985 0.037232 GGCGGCCTACTTATAGCTGG 60.037 60.000 12.87 0.00 0.00 4.85
3983 4986 0.969894 AGGCGGCCTACTTATAGCTG 59.030 55.000 22.47 0.00 28.47 4.24
3984 4987 0.969894 CAGGCGGCCTACTTATAGCT 59.030 55.000 23.37 0.00 29.64 3.32
3985 4988 0.966920 TCAGGCGGCCTACTTATAGC 59.033 55.000 23.37 0.00 29.64 2.97
3986 4989 3.746045 TTTCAGGCGGCCTACTTATAG 57.254 47.619 23.37 7.63 29.64 1.31
3987 4990 4.699925 ATTTTCAGGCGGCCTACTTATA 57.300 40.909 23.37 5.72 29.64 0.98
3988 4991 3.577805 ATTTTCAGGCGGCCTACTTAT 57.422 42.857 23.37 10.38 29.64 1.73
3989 4992 3.359695 AATTTTCAGGCGGCCTACTTA 57.640 42.857 23.37 8.36 29.64 2.24
3990 4993 2.215942 AATTTTCAGGCGGCCTACTT 57.784 45.000 23.37 4.03 29.64 2.24
3991 4994 2.215942 AAATTTTCAGGCGGCCTACT 57.784 45.000 23.37 0.00 29.64 2.57
3992 4995 4.649088 AATAAATTTTCAGGCGGCCTAC 57.351 40.909 23.37 0.00 29.64 3.18
3993 4996 4.707448 TGAAATAAATTTTCAGGCGGCCTA 59.293 37.500 23.37 6.42 33.90 3.93
3994 4997 3.513515 TGAAATAAATTTTCAGGCGGCCT 59.486 39.130 17.69 17.69 33.90 5.19
3995 4998 3.855858 TGAAATAAATTTTCAGGCGGCC 58.144 40.909 12.11 12.11 33.90 6.13
4009 5012 9.713713 GCCCAAAATTTAACTTACCTGAAATAA 57.286 29.630 0.00 0.00 0.00 1.40
4010 5013 8.315482 GGCCCAAAATTTAACTTACCTGAAATA 58.685 33.333 0.00 0.00 0.00 1.40
4011 5014 7.165485 GGCCCAAAATTTAACTTACCTGAAAT 58.835 34.615 0.00 0.00 0.00 2.17
4012 5015 6.526526 GGCCCAAAATTTAACTTACCTGAAA 58.473 36.000 0.00 0.00 0.00 2.69
4013 5016 5.279056 CGGCCCAAAATTTAACTTACCTGAA 60.279 40.000 0.00 0.00 0.00 3.02
4014 5017 4.218852 CGGCCCAAAATTTAACTTACCTGA 59.781 41.667 0.00 0.00 0.00 3.86
4015 5018 4.021807 ACGGCCCAAAATTTAACTTACCTG 60.022 41.667 0.00 0.00 0.00 4.00
4016 5019 4.154176 ACGGCCCAAAATTTAACTTACCT 58.846 39.130 0.00 0.00 0.00 3.08
4017 5020 4.524316 ACGGCCCAAAATTTAACTTACC 57.476 40.909 0.00 0.00 0.00 2.85
4018 5021 4.618067 CGAACGGCCCAAAATTTAACTTAC 59.382 41.667 0.00 0.00 0.00 2.34
4019 5022 4.518211 TCGAACGGCCCAAAATTTAACTTA 59.482 37.500 0.00 0.00 0.00 2.24
4020 5023 3.318557 TCGAACGGCCCAAAATTTAACTT 59.681 39.130 0.00 0.00 0.00 2.66
4021 5024 2.885894 TCGAACGGCCCAAAATTTAACT 59.114 40.909 0.00 0.00 0.00 2.24
4022 5025 3.285816 TCGAACGGCCCAAAATTTAAC 57.714 42.857 0.00 0.00 0.00 2.01
4023 5026 4.022242 TCAATCGAACGGCCCAAAATTTAA 60.022 37.500 0.00 0.00 0.00 1.52
4024 5027 3.506455 TCAATCGAACGGCCCAAAATTTA 59.494 39.130 0.00 0.00 0.00 1.40
4025 5028 2.297597 TCAATCGAACGGCCCAAAATTT 59.702 40.909 0.00 0.00 0.00 1.82
4026 5029 1.889829 TCAATCGAACGGCCCAAAATT 59.110 42.857 0.00 0.00 0.00 1.82
4027 5030 1.472480 CTCAATCGAACGGCCCAAAAT 59.528 47.619 0.00 0.00 0.00 1.82
4028 5031 0.878416 CTCAATCGAACGGCCCAAAA 59.122 50.000 0.00 0.00 0.00 2.44
4029 5032 0.035598 TCTCAATCGAACGGCCCAAA 59.964 50.000 0.00 0.00 0.00 3.28
4030 5033 0.251916 ATCTCAATCGAACGGCCCAA 59.748 50.000 0.00 0.00 0.00 4.12
4031 5034 0.179084 GATCTCAATCGAACGGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
4032 5035 0.880718 GGATCTCAATCGAACGGCCC 60.881 60.000 0.00 0.00 32.24 5.80
4033 5036 0.179084 TGGATCTCAATCGAACGGCC 60.179 55.000 0.00 0.00 32.24 6.13
4034 5037 1.651987 TTGGATCTCAATCGAACGGC 58.348 50.000 0.00 0.00 32.24 5.68
4035 5038 2.545526 CCATTGGATCTCAATCGAACGG 59.454 50.000 0.00 2.69 43.70 4.44
4036 5039 2.032549 GCCATTGGATCTCAATCGAACG 60.033 50.000 6.95 0.00 43.70 3.95
4037 5040 2.291741 GGCCATTGGATCTCAATCGAAC 59.708 50.000 6.95 0.00 43.70 3.95
4038 5041 2.575532 GGCCATTGGATCTCAATCGAA 58.424 47.619 6.95 0.00 43.70 3.71
4039 5042 1.202806 GGGCCATTGGATCTCAATCGA 60.203 52.381 6.95 0.00 43.70 3.59
4040 5043 1.202855 AGGGCCATTGGATCTCAATCG 60.203 52.381 6.18 2.95 43.70 3.34
4041 5044 2.512705 GAGGGCCATTGGATCTCAATC 58.487 52.381 6.18 0.00 43.70 2.67
4042 5045 1.146566 GGAGGGCCATTGGATCTCAAT 59.853 52.381 20.13 4.21 46.24 2.57
4043 5046 0.552848 GGAGGGCCATTGGATCTCAA 59.447 55.000 20.13 0.00 40.01 3.02
4044 5047 0.327867 AGGAGGGCCATTGGATCTCA 60.328 55.000 20.13 0.00 36.29 3.27
4045 5048 0.849417 AAGGAGGGCCATTGGATCTC 59.151 55.000 6.18 11.44 36.29 2.75
4046 5049 0.849417 GAAGGAGGGCCATTGGATCT 59.151 55.000 6.18 2.21 36.29 2.75
4047 5050 0.849417 AGAAGGAGGGCCATTGGATC 59.151 55.000 6.18 0.63 36.29 3.36
4048 5051 1.312884 AAGAAGGAGGGCCATTGGAT 58.687 50.000 6.18 0.00 36.29 3.41
4049 5052 1.005924 GAAAGAAGGAGGGCCATTGGA 59.994 52.381 6.18 0.00 36.29 3.53
4050 5053 1.006400 AGAAAGAAGGAGGGCCATTGG 59.994 52.381 6.18 0.00 36.29 3.16
4051 5054 2.521547 AGAAAGAAGGAGGGCCATTG 57.478 50.000 6.18 0.00 36.29 2.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.