Multiple sequence alignment - TraesCS4D01G285000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G285000 chr4D 100.000 3623 0 0 1 3623 455765606 455761984 0.000000e+00 6691
1 TraesCS4D01G285000 chr1D 98.991 694 6 1 2931 3623 10775157 10775850 0.000000e+00 1242
2 TraesCS4D01G285000 chr1D 96.056 710 9 3 2932 3623 370322424 370321716 0.000000e+00 1138
3 TraesCS4D01G285000 chr2D 98.990 693 6 1 2932 3623 81970997 81971689 0.000000e+00 1240
4 TraesCS4D01G285000 chr2D 83.180 327 49 4 2932 3255 592035264 592034941 9.840000e-76 294
5 TraesCS4D01G285000 chr5D 98.565 697 8 2 2928 3623 400283552 400282857 0.000000e+00 1230
6 TraesCS4D01G285000 chr5D 83.172 309 40 12 2926 3232 98667265 98667563 4.610000e-69 272
7 TraesCS4D01G285000 chr4A 88.100 916 83 14 2018 2925 11772202 11773099 0.000000e+00 1064
8 TraesCS4D01G285000 chr4A 85.830 494 39 14 295 775 11770683 11771158 2.510000e-136 496
9 TraesCS4D01G285000 chr4A 88.418 354 40 1 1552 1904 11771764 11772117 3.340000e-115 425
10 TraesCS4D01G285000 chr6A 93.944 710 23 6 2931 3623 84049933 84049227 0.000000e+00 1055
11 TraesCS4D01G285000 chr4B 80.468 1495 138 90 40 1467 569768001 569766594 0.000000e+00 1002
12 TraesCS4D01G285000 chr4B 89.665 687 57 10 2018 2701 569766014 569765339 0.000000e+00 863
13 TraesCS4D01G285000 chr4B 91.391 453 38 1 1452 1904 569766547 569766096 1.430000e-173 619
14 TraesCS4D01G285000 chr3B 85.434 714 64 12 2932 3623 800934077 800934772 0.000000e+00 706
15 TraesCS4D01G285000 chr3A 97.193 285 6 2 2932 3216 682752654 682752936 7.040000e-132 481
16 TraesCS4D01G285000 chr3A 97.531 81 2 0 3543 3623 682753399 682753479 4.880000e-29 139
17 TraesCS4D01G285000 chr2A 96.154 286 8 3 2932 3216 602690519 602690236 7.090000e-127 464
18 TraesCS4D01G285000 chr2A 95.062 81 4 0 3543 3623 602689777 602689697 1.060000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G285000 chr4D 455761984 455765606 3622 True 6691.000000 6691 100.000000 1 3623 1 chr4D.!!$R1 3622
1 TraesCS4D01G285000 chr1D 10775157 10775850 693 False 1242.000000 1242 98.991000 2931 3623 1 chr1D.!!$F1 692
2 TraesCS4D01G285000 chr1D 370321716 370322424 708 True 1138.000000 1138 96.056000 2932 3623 1 chr1D.!!$R1 691
3 TraesCS4D01G285000 chr2D 81970997 81971689 692 False 1240.000000 1240 98.990000 2932 3623 1 chr2D.!!$F1 691
4 TraesCS4D01G285000 chr5D 400282857 400283552 695 True 1230.000000 1230 98.565000 2928 3623 1 chr5D.!!$R1 695
5 TraesCS4D01G285000 chr4A 11770683 11773099 2416 False 661.666667 1064 87.449333 295 2925 3 chr4A.!!$F1 2630
6 TraesCS4D01G285000 chr6A 84049227 84049933 706 True 1055.000000 1055 93.944000 2931 3623 1 chr6A.!!$R1 692
7 TraesCS4D01G285000 chr4B 569765339 569768001 2662 True 828.000000 1002 87.174667 40 2701 3 chr4B.!!$R1 2661
8 TraesCS4D01G285000 chr3B 800934077 800934772 695 False 706.000000 706 85.434000 2932 3623 1 chr3B.!!$F1 691
9 TraesCS4D01G285000 chr3A 682752654 682753479 825 False 310.000000 481 97.362000 2932 3623 2 chr3A.!!$F1 691
10 TraesCS4D01G285000 chr2A 602689697 602690519 822 True 296.000000 464 95.608000 2932 3623 2 chr2A.!!$R1 691

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
800 828 0.032130 ACTTCTCTCGTTTGCTGCGA 59.968 50.0 0.00 0.0 36.85 5.10 F
1904 2274 0.109735 GGCTGCAGAAAAAGGTACGC 60.110 55.0 20.43 0.0 0.00 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2003 2391 0.034756 TGTAGCAGGCGAGCAAAGAA 59.965 50.000 7.67 0.0 36.85 2.52 R
2908 3306 2.397597 TGCATCAGGAGTGTATGGCTA 58.602 47.619 0.00 0.0 0.00 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.627123 ATTTCTTCCATAAGTAATTTCGGATGA 57.373 29.630 5.37 5.37 30.95 2.92
28 29 9.456147 TTTCTTCCATAAGTAATTTCGGATGAA 57.544 29.630 13.16 13.16 35.31 2.57
29 30 8.662781 TCTTCCATAAGTAATTTCGGATGAAG 57.337 34.615 6.48 0.00 33.20 3.02
30 31 8.482943 TCTTCCATAAGTAATTTCGGATGAAGA 58.517 33.333 0.00 0.00 33.20 2.87
31 32 9.109393 CTTCCATAAGTAATTTCGGATGAAGAA 57.891 33.333 0.00 0.00 35.06 2.52
32 33 9.456147 TTCCATAAGTAATTTCGGATGAAGAAA 57.544 29.630 0.00 0.00 41.17 2.52
33 34 8.889717 TCCATAAGTAATTTCGGATGAAGAAAC 58.110 33.333 0.00 0.00 39.96 2.78
34 35 8.893727 CCATAAGTAATTTCGGATGAAGAAACT 58.106 33.333 0.00 0.00 39.96 2.66
70 71 1.135053 TCAAACGTTGACGAGACACCA 60.135 47.619 10.87 0.00 43.02 4.17
72 73 1.779569 AACGTTGACGAGACACCATC 58.220 50.000 10.87 0.00 43.02 3.51
76 77 1.200716 GTTGACGAGACACCATCGGTA 59.799 52.381 0.00 0.00 44.36 4.02
84 85 1.754803 GACACCATCGGTACTGGATCA 59.245 52.381 6.63 0.00 37.22 2.92
105 106 8.076178 GGATCAAAAATTTCAGAAGAGACGAAA 58.924 33.333 0.00 0.00 33.48 3.46
106 107 8.788409 ATCAAAAATTTCAGAAGAGACGAAAC 57.212 30.769 0.00 0.00 31.87 2.78
111 112 3.217599 TCAGAAGAGACGAAACATCCG 57.782 47.619 0.00 0.00 0.00 4.18
116 117 4.158764 AGAAGAGACGAAACATCCGAGATT 59.841 41.667 0.00 0.00 0.00 2.40
122 123 6.210078 AGACGAAACATCCGAGATTATCTTC 58.790 40.000 0.00 0.00 0.00 2.87
124 125 5.749109 ACGAAACATCCGAGATTATCTTCAC 59.251 40.000 0.00 0.00 0.00 3.18
142 143 2.875933 TCACAAAACGAAGGGATGTGTC 59.124 45.455 4.37 0.00 41.52 3.67
150 151 2.100989 GAAGGGATGTGTCGTAGGAGT 58.899 52.381 0.00 0.00 0.00 3.85
152 153 0.460311 GGGATGTGTCGTAGGAGTGG 59.540 60.000 0.00 0.00 0.00 4.00
153 154 1.183549 GGATGTGTCGTAGGAGTGGT 58.816 55.000 0.00 0.00 0.00 4.16
156 157 3.194116 GGATGTGTCGTAGGAGTGGTAAA 59.806 47.826 0.00 0.00 0.00 2.01
171 172 9.990868 AGGAGTGGTAAAACAAAATATTATCCT 57.009 29.630 0.00 0.00 0.00 3.24
175 176 9.797556 GTGGTAAAACAAAATATTATCCTCCAC 57.202 33.333 0.00 0.00 0.00 4.02
176 177 8.973182 TGGTAAAACAAAATATTATCCTCCACC 58.027 33.333 0.00 0.00 0.00 4.61
190 191 0.601841 TCCACCGGCGTTTTCTTCTC 60.602 55.000 6.01 0.00 0.00 2.87
191 192 1.491563 CACCGGCGTTTTCTTCTCG 59.508 57.895 6.01 0.00 0.00 4.04
225 226 0.390472 CAGGTGGAAGAACGAGAGGC 60.390 60.000 0.00 0.00 0.00 4.70
243 244 0.384353 GCCGTGAGAGTTTTCAACGC 60.384 55.000 0.00 0.00 35.54 4.84
262 263 4.208948 CGCGTACGTGCAGCCATG 62.209 66.667 16.78 0.00 34.15 3.66
263 264 2.813474 GCGTACGTGCAGCCATGA 60.813 61.111 17.90 0.00 34.15 3.07
264 265 2.802667 GCGTACGTGCAGCCATGAG 61.803 63.158 17.90 0.00 34.15 2.90
362 368 2.672195 CGGCCCTTTCTGCATCTTTTTC 60.672 50.000 0.00 0.00 0.00 2.29
364 370 2.564504 GCCCTTTCTGCATCTTTTTCCT 59.435 45.455 0.00 0.00 0.00 3.36
365 371 3.367806 GCCCTTTCTGCATCTTTTTCCTC 60.368 47.826 0.00 0.00 0.00 3.71
367 373 4.085009 CCTTTCTGCATCTTTTTCCTCCT 58.915 43.478 0.00 0.00 0.00 3.69
369 375 5.011431 CCTTTCTGCATCTTTTTCCTCCTTT 59.989 40.000 0.00 0.00 0.00 3.11
370 376 6.463472 CCTTTCTGCATCTTTTTCCTCCTTTT 60.463 38.462 0.00 0.00 0.00 2.27
371 377 6.484364 TTCTGCATCTTTTTCCTCCTTTTT 57.516 33.333 0.00 0.00 0.00 1.94
413 422 3.253432 CGTGGGGAGAAGAAAAGAAAAGG 59.747 47.826 0.00 0.00 0.00 3.11
443 452 1.005394 GGGCGGAGAAAGTGACGAA 60.005 57.895 0.00 0.00 0.00 3.85
444 453 0.601841 GGGCGGAGAAAGTGACGAAA 60.602 55.000 0.00 0.00 0.00 3.46
445 454 0.790814 GGCGGAGAAAGTGACGAAAG 59.209 55.000 0.00 0.00 0.00 2.62
446 455 0.790814 GCGGAGAAAGTGACGAAAGG 59.209 55.000 0.00 0.00 0.00 3.11
478 487 0.108804 GCTGCAATGCAAGCATCTGT 60.109 50.000 19.42 0.00 41.82 3.41
481 490 0.528924 GCAATGCAAGCATCTGTGGA 59.471 50.000 8.14 0.00 35.31 4.02
487 496 1.743091 GCAAGCATCTGTGGAGAGAGG 60.743 57.143 0.00 0.00 0.00 3.69
488 497 1.554160 CAAGCATCTGTGGAGAGAGGT 59.446 52.381 0.00 0.00 0.00 3.85
489 498 1.484038 AGCATCTGTGGAGAGAGGTC 58.516 55.000 0.00 0.00 0.00 3.85
490 499 1.189752 GCATCTGTGGAGAGAGGTCA 58.810 55.000 0.00 0.00 0.00 4.02
491 500 1.136695 GCATCTGTGGAGAGAGGTCAG 59.863 57.143 0.00 0.00 0.00 3.51
588 601 6.057533 TCATCATAGCGGTCTGAATGAAAAT 58.942 36.000 6.79 0.00 32.47 1.82
589 602 5.739752 TCATAGCGGTCTGAATGAAAATG 57.260 39.130 0.00 0.00 0.00 2.32
594 607 4.984161 AGCGGTCTGAATGAAAATGTTTTG 59.016 37.500 0.00 0.00 0.00 2.44
649 676 1.265365 GAGCGCAGATAAATCCAAGGC 59.735 52.381 11.47 0.00 0.00 4.35
713 741 2.621526 TCCTCCGAAAGCAAAAGGTTTC 59.378 45.455 9.41 9.41 0.00 2.78
798 826 2.644078 CAAACTTCTCTCGTTTGCTGC 58.356 47.619 3.14 0.00 42.99 5.25
799 827 0.861837 AACTTCTCTCGTTTGCTGCG 59.138 50.000 0.00 0.00 0.00 5.18
800 828 0.032130 ACTTCTCTCGTTTGCTGCGA 59.968 50.000 0.00 0.00 36.85 5.10
801 829 1.139989 CTTCTCTCGTTTGCTGCGAA 58.860 50.000 0.00 0.00 37.93 4.70
802 830 1.125748 CTTCTCTCGTTTGCTGCGAAG 59.874 52.381 1.73 0.00 37.93 3.79
804 832 0.712775 CTCTCGTTTGCTGCGAAGAG 59.287 55.000 16.50 16.50 37.93 2.85
805 833 0.313987 TCTCGTTTGCTGCGAAGAGA 59.686 50.000 19.19 19.19 37.93 3.10
806 834 0.436531 CTCGTTTGCTGCGAAGAGAC 59.563 55.000 17.18 2.40 37.93 3.36
815 991 1.742880 GCGAAGAGACATGCAGCCA 60.743 57.895 0.00 0.00 0.00 4.75
844 1020 2.187100 TGGGCTTTTCCATCCAATTCC 58.813 47.619 0.00 0.00 36.21 3.01
845 1021 2.187100 GGGCTTTTCCATCCAATTCCA 58.813 47.619 0.00 0.00 36.21 3.53
846 1022 2.571202 GGGCTTTTCCATCCAATTCCAA 59.429 45.455 0.00 0.00 36.21 3.53
847 1023 3.200605 GGGCTTTTCCATCCAATTCCAAT 59.799 43.478 0.00 0.00 36.21 3.16
854 1030 2.701951 CCATCCAATTCCAATTCCTGGG 59.298 50.000 0.00 0.00 46.44 4.45
863 1042 1.926489 AATTCCTGGGGCCCACGTA 60.926 57.895 24.76 12.67 0.00 3.57
868 1047 2.203877 TGGGGCCCACGTAGTCTT 60.204 61.111 24.76 0.00 41.61 3.01
871 1050 1.519246 GGGCCCACGTAGTCTTACC 59.481 63.158 19.95 0.00 41.61 2.85
872 1051 1.140375 GGCCCACGTAGTCTTACCG 59.860 63.158 0.00 0.00 41.61 4.02
873 1052 1.140375 GCCCACGTAGTCTTACCGG 59.860 63.158 0.00 0.00 41.61 5.28
876 1063 0.453390 CCACGTAGTCTTACCGGACC 59.547 60.000 9.46 0.00 41.61 4.46
899 1086 2.551270 CTCGTGAACGTTGGCTGC 59.449 61.111 5.00 0.00 40.80 5.25
905 1092 1.370900 GAACGTTGGCTGCTTGCTG 60.371 57.895 5.00 0.00 42.39 4.41
916 1103 2.724349 CTGCTTGCTGTGTTTTCTCAC 58.276 47.619 0.00 0.00 38.63 3.51
917 1104 1.063912 TGCTTGCTGTGTTTTCTCACG 59.936 47.619 0.00 0.00 40.74 4.35
918 1105 1.064060 GCTTGCTGTGTTTTCTCACGT 59.936 47.619 0.00 0.00 40.74 4.49
919 1106 2.708514 CTTGCTGTGTTTTCTCACGTG 58.291 47.619 9.94 9.94 40.74 4.49
921 1108 1.663643 TGCTGTGTTTTCTCACGTGAC 59.336 47.619 15.76 5.71 40.74 3.67
923 1110 2.351726 GCTGTGTTTTCTCACGTGACTT 59.648 45.455 15.76 0.00 40.74 3.01
927 1114 3.863424 GTGTTTTCTCACGTGACTTGAGA 59.137 43.478 16.58 16.58 46.25 3.27
930 1117 2.271944 TCTCACGTGACTTGAGAGGA 57.728 50.000 16.58 4.87 43.69 3.71
980 1205 3.654020 GATTGGATGAGGCGCGCC 61.654 66.667 42.34 42.34 0.00 6.53
1070 1327 1.766143 GATTCGTGGACAGCATCGCC 61.766 60.000 0.00 0.00 0.00 5.54
1071 1328 2.520465 ATTCGTGGACAGCATCGCCA 62.520 55.000 0.00 0.00 0.00 5.69
1078 1335 2.513204 CAGCATCGCCAGACAGGG 60.513 66.667 0.00 0.00 38.09 4.45
1186 1464 2.029288 CTGACGCAGCGACCAACAT 61.029 57.895 24.65 0.00 0.00 2.71
1197 1475 2.259618 CGACCAACATAGTGAGTTCGG 58.740 52.381 0.00 0.00 0.00 4.30
1199 1477 2.993899 GACCAACATAGTGAGTTCGGTG 59.006 50.000 0.00 0.00 0.00 4.94
1206 1484 4.021456 ACATAGTGAGTTCGGTGTGAATCA 60.021 41.667 0.00 0.00 39.21 2.57
1209 1487 3.748048 AGTGAGTTCGGTGTGAATCATTG 59.252 43.478 0.00 0.00 39.21 2.82
1216 1495 1.747355 GGTGTGAATCATTGGCTCCAG 59.253 52.381 0.00 0.00 0.00 3.86
1225 1504 4.726646 TGGCTCCAGCTAGGCATA 57.273 55.556 8.59 0.00 46.09 3.14
1246 1525 6.593382 GCATATCTCTGTCTGATGGTTATTCC 59.407 42.308 0.00 0.00 0.00 3.01
1247 1526 7.526860 GCATATCTCTGTCTGATGGTTATTCCT 60.527 40.741 0.00 0.00 37.07 3.36
1248 1527 5.860941 TCTCTGTCTGATGGTTATTCCTC 57.139 43.478 0.00 0.00 37.07 3.71
1249 1528 4.339530 TCTCTGTCTGATGGTTATTCCTCG 59.660 45.833 0.00 0.00 37.07 4.63
1261 1548 2.593346 ATTCCTCGTCTGTCTGATGC 57.407 50.000 0.00 0.00 0.00 3.91
1263 1550 0.960861 TCCTCGTCTGTCTGATGCGT 60.961 55.000 0.00 0.00 0.00 5.24
1265 1552 1.335182 CCTCGTCTGTCTGATGCGTAT 59.665 52.381 0.00 0.00 0.00 3.06
1266 1553 2.223595 CCTCGTCTGTCTGATGCGTATT 60.224 50.000 0.00 0.00 0.00 1.89
1267 1554 3.039405 CTCGTCTGTCTGATGCGTATTC 58.961 50.000 0.00 0.00 0.00 1.75
1268 1555 1.775770 CGTCTGTCTGATGCGTATTCG 59.224 52.381 0.00 0.00 40.37 3.34
1269 1556 2.120232 GTCTGTCTGATGCGTATTCGG 58.880 52.381 0.00 0.00 37.56 4.30
1270 1557 2.021457 TCTGTCTGATGCGTATTCGGA 58.979 47.619 0.00 0.00 42.23 4.55
1271 1558 2.425668 TCTGTCTGATGCGTATTCGGAA 59.574 45.455 0.00 0.00 41.24 4.30
1272 1559 3.119280 TCTGTCTGATGCGTATTCGGAAA 60.119 43.478 0.00 0.00 41.24 3.13
1273 1560 3.591023 TGTCTGATGCGTATTCGGAAAA 58.409 40.909 0.00 0.00 41.24 2.29
1279 1567 4.328983 TGATGCGTATTCGGAAAAACTCTC 59.671 41.667 0.00 0.00 41.24 3.20
1299 1587 3.972950 CGAGTCTAGAATCGTGACCAT 57.027 47.619 29.17 0.00 42.99 3.55
1301 1589 5.614923 CGAGTCTAGAATCGTGACCATAT 57.385 43.478 29.17 0.00 42.99 1.78
1310 1598 1.134640 TCGTGACCATATGAAACCCCG 60.135 52.381 3.65 0.00 0.00 5.73
1348 1636 1.257743 TAGTCCAGTCAGTGTGCCTC 58.742 55.000 0.00 0.00 0.00 4.70
1349 1637 1.373497 GTCCAGTCAGTGTGCCTCG 60.373 63.158 0.00 0.00 0.00 4.63
1382 1671 4.202336 TGTTCATTGGTCAAATGCCATGTT 60.202 37.500 0.00 0.00 44.63 2.71
1385 1674 4.755629 TCATTGGTCAAATGCCATGTTTTG 59.244 37.500 0.00 6.66 44.63 2.44
1386 1675 2.492012 TGGTCAAATGCCATGTTTTGC 58.508 42.857 7.70 0.00 33.77 3.68
1387 1676 2.158856 TGGTCAAATGCCATGTTTTGCA 60.159 40.909 0.00 0.00 42.52 4.08
1388 1677 2.223845 GGTCAAATGCCATGTTTTGCAC 59.776 45.455 0.00 3.19 40.88 4.57
1389 1678 3.132925 GTCAAATGCCATGTTTTGCACT 58.867 40.909 0.00 0.00 40.88 4.40
1413 1704 5.995897 TGGCTTGTTTTTCTACTACTCCTTC 59.004 40.000 0.00 0.00 0.00 3.46
1414 1705 5.120363 GGCTTGTTTTTCTACTACTCCTTCG 59.880 44.000 0.00 0.00 0.00 3.79
1415 1706 5.924825 GCTTGTTTTTCTACTACTCCTTCGA 59.075 40.000 0.00 0.00 0.00 3.71
1416 1707 6.089685 GCTTGTTTTTCTACTACTCCTTCGAG 59.910 42.308 0.00 0.00 42.32 4.04
1420 1711 3.196939 TCTACTACTCCTTCGAGAGGC 57.803 52.381 6.63 0.00 45.87 4.70
1441 1732 1.473278 ACTAGCTAACTCTGTCGGTGC 59.527 52.381 0.00 0.00 0.00 5.01
1563 1933 2.125753 GCTGGTCTCCTCGTGCTG 60.126 66.667 0.00 0.00 0.00 4.41
1623 1993 1.838073 ATTGTCGTGTCCCTCCACCC 61.838 60.000 0.00 0.00 31.47 4.61
1656 2026 2.019984 CATTCAGGCCTAACTGCTTCC 58.980 52.381 3.98 0.00 38.36 3.46
1733 2103 1.482593 CTCTCCGTGCCTTTATCCACT 59.517 52.381 0.00 0.00 0.00 4.00
1877 2247 0.832135 AGGAGAACGCCAAGGTCAGA 60.832 55.000 0.00 0.00 39.61 3.27
1904 2274 0.109735 GGCTGCAGAAAAAGGTACGC 60.110 55.000 20.43 0.00 0.00 4.42
1906 2276 1.266989 GCTGCAGAAAAAGGTACGCTT 59.733 47.619 20.43 0.00 0.00 4.68
1907 2277 2.287608 GCTGCAGAAAAAGGTACGCTTT 60.288 45.455 20.43 4.16 0.00 3.51
1910 2280 3.129638 TGCAGAAAAAGGTACGCTTTTGT 59.870 39.130 17.39 8.23 34.66 2.83
1912 2282 4.565166 GCAGAAAAAGGTACGCTTTTGTTT 59.435 37.500 17.39 7.14 34.66 2.83
1913 2283 5.062934 GCAGAAAAAGGTACGCTTTTGTTTT 59.937 36.000 17.39 6.88 34.66 2.43
1914 2284 6.465978 CAGAAAAAGGTACGCTTTTGTTTTG 58.534 36.000 17.39 11.81 34.66 2.44
1915 2285 5.579119 AGAAAAAGGTACGCTTTTGTTTTGG 59.421 36.000 17.39 0.00 34.66 3.28
1919 2289 3.110358 GGTACGCTTTTGTTTTGGTCAC 58.890 45.455 0.00 0.00 0.00 3.67
1921 2291 1.200484 ACGCTTTTGTTTTGGTCACGT 59.800 42.857 0.00 0.00 0.00 4.49
1929 2313 2.299297 TGTTTTGGTCACGTTTGGGTTT 59.701 40.909 0.00 0.00 0.00 3.27
1946 2334 2.267426 GTTTCAACCACCAGCAACAAC 58.733 47.619 0.00 0.00 0.00 3.32
1947 2335 1.550327 TTCAACCACCAGCAACAACA 58.450 45.000 0.00 0.00 0.00 3.33
1948 2336 1.550327 TCAACCACCAGCAACAACAA 58.450 45.000 0.00 0.00 0.00 2.83
1949 2337 2.106566 TCAACCACCAGCAACAACAAT 58.893 42.857 0.00 0.00 0.00 2.71
1950 2338 2.499289 TCAACCACCAGCAACAACAATT 59.501 40.909 0.00 0.00 0.00 2.32
1951 2339 3.055530 TCAACCACCAGCAACAACAATTT 60.056 39.130 0.00 0.00 0.00 1.82
1952 2340 2.903798 ACCACCAGCAACAACAATTTG 58.096 42.857 0.00 0.00 38.83 2.32
1955 2343 3.495377 CCACCAGCAACAACAATTTGATG 59.505 43.478 2.79 4.16 39.55 3.07
1963 2351 6.327177 CAACAACAATTTGATGCTGCTATC 57.673 37.500 2.79 3.32 36.48 2.08
1964 2352 4.665212 ACAACAATTTGATGCTGCTATCG 58.335 39.130 2.79 0.00 36.48 2.92
1967 2355 6.128035 ACAACAATTTGATGCTGCTATCGTTA 60.128 34.615 2.79 0.00 36.48 3.18
1968 2356 6.052840 ACAATTTGATGCTGCTATCGTTAG 57.947 37.500 2.79 0.00 0.00 2.34
1979 2367 4.700596 GCTATCGTTAGCTGCTAACAAG 57.299 45.455 37.25 31.28 44.44 3.16
1980 2368 4.113354 GCTATCGTTAGCTGCTAACAAGT 58.887 43.478 37.25 27.62 44.44 3.16
1981 2369 4.026475 GCTATCGTTAGCTGCTAACAAGTG 60.026 45.833 37.25 27.59 44.44 3.16
1982 2370 3.380479 TCGTTAGCTGCTAACAAGTGT 57.620 42.857 37.25 5.54 44.44 3.55
1983 2371 3.057019 TCGTTAGCTGCTAACAAGTGTG 58.943 45.455 37.25 25.47 44.44 3.82
1984 2372 2.800544 CGTTAGCTGCTAACAAGTGTGT 59.199 45.455 37.25 4.37 44.44 3.72
1986 2374 4.608445 CGTTAGCTGCTAACAAGTGTGTTC 60.608 45.833 37.25 17.18 45.00 3.18
1987 2375 3.199880 AGCTGCTAACAAGTGTGTTCT 57.800 42.857 0.00 0.00 45.00 3.01
1988 2376 3.134458 AGCTGCTAACAAGTGTGTTCTC 58.866 45.455 0.00 0.00 45.00 2.87
1989 2377 3.134458 GCTGCTAACAAGTGTGTTCTCT 58.866 45.455 0.00 0.00 45.00 3.10
1990 2378 4.039245 AGCTGCTAACAAGTGTGTTCTCTA 59.961 41.667 0.00 0.00 45.00 2.43
1991 2379 4.150804 GCTGCTAACAAGTGTGTTCTCTAC 59.849 45.833 0.00 0.00 45.00 2.59
1992 2380 4.628074 TGCTAACAAGTGTGTTCTCTACC 58.372 43.478 0.00 0.00 45.00 3.18
1993 2381 4.344102 TGCTAACAAGTGTGTTCTCTACCT 59.656 41.667 0.00 0.00 45.00 3.08
1994 2382 4.686554 GCTAACAAGTGTGTTCTCTACCTG 59.313 45.833 0.00 0.00 45.00 4.00
1995 2383 4.755266 AACAAGTGTGTTCTCTACCTGT 57.245 40.909 0.00 0.00 45.00 4.00
1996 2384 4.323553 ACAAGTGTGTTCTCTACCTGTC 57.676 45.455 0.00 0.00 32.58 3.51
1997 2385 3.069729 ACAAGTGTGTTCTCTACCTGTCC 59.930 47.826 0.00 0.00 32.58 4.02
1998 2386 2.249139 AGTGTGTTCTCTACCTGTCCC 58.751 52.381 0.00 0.00 0.00 4.46
1999 2387 2.158295 AGTGTGTTCTCTACCTGTCCCT 60.158 50.000 0.00 0.00 0.00 4.20
2000 2388 2.028930 GTGTGTTCTCTACCTGTCCCTG 60.029 54.545 0.00 0.00 0.00 4.45
2001 2389 2.158370 TGTGTTCTCTACCTGTCCCTGA 60.158 50.000 0.00 0.00 0.00 3.86
2002 2390 2.231721 GTGTTCTCTACCTGTCCCTGAC 59.768 54.545 0.00 0.00 0.00 3.51
2003 2391 2.110188 TGTTCTCTACCTGTCCCTGACT 59.890 50.000 0.00 0.00 33.15 3.41
2004 2392 3.166679 GTTCTCTACCTGTCCCTGACTT 58.833 50.000 0.00 0.00 33.15 3.01
2005 2393 3.088789 TCTCTACCTGTCCCTGACTTC 57.911 52.381 0.00 0.00 33.15 3.01
2006 2394 2.650322 TCTCTACCTGTCCCTGACTTCT 59.350 50.000 0.00 0.00 33.15 2.85
2007 2395 3.076182 TCTCTACCTGTCCCTGACTTCTT 59.924 47.826 0.00 0.00 33.15 2.52
2008 2396 3.835395 CTCTACCTGTCCCTGACTTCTTT 59.165 47.826 0.00 0.00 33.15 2.52
2009 2397 2.938956 ACCTGTCCCTGACTTCTTTG 57.061 50.000 0.00 0.00 33.15 2.77
2010 2398 1.202818 ACCTGTCCCTGACTTCTTTGC 60.203 52.381 0.00 0.00 33.15 3.68
2011 2399 1.072965 CCTGTCCCTGACTTCTTTGCT 59.927 52.381 0.00 0.00 33.15 3.91
2012 2400 2.421619 CTGTCCCTGACTTCTTTGCTC 58.578 52.381 0.00 0.00 33.15 4.26
2013 2401 1.270305 TGTCCCTGACTTCTTTGCTCG 60.270 52.381 0.00 0.00 33.15 5.03
2014 2402 0.320771 TCCCTGACTTCTTTGCTCGC 60.321 55.000 0.00 0.00 0.00 5.03
2015 2403 1.301677 CCCTGACTTCTTTGCTCGCC 61.302 60.000 0.00 0.00 0.00 5.54
2016 2404 0.321122 CCTGACTTCTTTGCTCGCCT 60.321 55.000 0.00 0.00 0.00 5.52
2020 2408 0.321671 ACTTCTTTGCTCGCCTGCTA 59.678 50.000 0.00 0.00 0.00 3.49
2243 2635 6.051646 GCATTTGCATCTGAAACAAAAACT 57.948 33.333 11.04 0.00 41.59 2.66
2280 2675 4.320057 CCTGAATCTGAGCTGTTTGTTGTC 60.320 45.833 0.00 0.00 0.00 3.18
2333 2728 3.286751 GCTGGTCAAGGCGTGCAA 61.287 61.111 0.00 0.00 0.00 4.08
2412 2807 1.043816 AGATGATGGCGTTCGAGGAT 58.956 50.000 0.00 0.00 0.00 3.24
2450 2845 2.446435 GTTCCTGCCCAGATAGCAAAA 58.554 47.619 0.00 0.00 40.35 2.44
2527 2922 1.770294 AGAGTAGGAGTGTAGCCTGC 58.230 55.000 0.00 0.00 38.28 4.85
2536 2931 1.002544 AGTGTAGCCTGCAGGAAGTTC 59.997 52.381 37.21 20.91 37.39 3.01
2569 2964 7.477494 TGTGAATTGCTTGATGTATGATTCAG 58.523 34.615 0.00 0.00 34.03 3.02
2570 2965 7.337436 TGTGAATTGCTTGATGTATGATTCAGA 59.663 33.333 0.00 0.00 34.03 3.27
2571 2966 7.856398 GTGAATTGCTTGATGTATGATTCAGAG 59.144 37.037 0.00 0.00 34.03 3.35
2572 2967 5.746307 TTGCTTGATGTATGATTCAGAGC 57.254 39.130 0.00 0.00 32.01 4.09
2573 2968 4.773013 TGCTTGATGTATGATTCAGAGCA 58.227 39.130 4.36 4.36 35.56 4.26
2574 2969 5.374071 TGCTTGATGTATGATTCAGAGCAT 58.626 37.500 4.36 0.00 34.32 3.79
2592 2987 3.839293 GCATATAGCTCGGACTACTTGG 58.161 50.000 0.00 0.00 41.15 3.61
2630 3027 8.662781 TGTTATTAAGCTAGACAATCATCACC 57.337 34.615 0.00 0.00 0.00 4.02
2633 3030 3.724508 AGCTAGACAATCATCACCGAG 57.275 47.619 0.00 0.00 0.00 4.63
2636 3033 4.343526 AGCTAGACAATCATCACCGAGAAT 59.656 41.667 0.00 0.00 0.00 2.40
2646 3043 6.304356 TCATCACCGAGAATCATAAAATGC 57.696 37.500 0.00 0.00 33.17 3.56
2671 3068 7.327032 GCTTCTCCACTGTCATTTCAAATAAAC 59.673 37.037 0.00 0.00 0.00 2.01
2678 3075 9.173939 CACTGTCATTTCAAATAAACAACTCTC 57.826 33.333 0.60 0.00 0.00 3.20
2707 3104 3.626028 AAATCGAGAACACACAAAGGC 57.374 42.857 0.00 0.00 0.00 4.35
2748 3146 8.960591 CAGCATACCATTTTATTATTAGAGGGG 58.039 37.037 0.00 0.00 0.00 4.79
2749 3147 8.116026 AGCATACCATTTTATTATTAGAGGGGG 58.884 37.037 0.00 0.00 0.00 5.40
2769 3167 2.562298 GGGACAGCCAATTCAACATTCA 59.438 45.455 0.00 0.00 35.15 2.57
2770 3168 3.196254 GGGACAGCCAATTCAACATTCAT 59.804 43.478 0.00 0.00 35.15 2.57
2771 3169 4.427312 GGACAGCCAATTCAACATTCATC 58.573 43.478 0.00 0.00 0.00 2.92
2772 3170 4.082081 GGACAGCCAATTCAACATTCATCA 60.082 41.667 0.00 0.00 0.00 3.07
2773 3171 4.813027 ACAGCCAATTCAACATTCATCAC 58.187 39.130 0.00 0.00 0.00 3.06
2774 3172 4.525487 ACAGCCAATTCAACATTCATCACT 59.475 37.500 0.00 0.00 0.00 3.41
2775 3173 4.862574 CAGCCAATTCAACATTCATCACTG 59.137 41.667 0.00 0.00 0.00 3.66
2776 3174 4.081862 AGCCAATTCAACATTCATCACTGG 60.082 41.667 0.00 0.00 0.00 4.00
2787 3185 5.905331 ACATTCATCACTGGGACTCCTTATA 59.095 40.000 0.00 0.00 0.00 0.98
2796 3194 6.778069 CACTGGGACTCCTTATATTACAGAGA 59.222 42.308 0.00 0.00 0.00 3.10
2812 3210 3.648067 ACAGAGACTCAATTTCCCAGTGA 59.352 43.478 5.02 0.00 0.00 3.41
2828 3226 4.163078 CCCAGTGACCTACATTCTTCAGAT 59.837 45.833 0.00 0.00 0.00 2.90
2871 3269 8.310382 CCAGATAGCAGTTAAGATAGCATACTT 58.690 37.037 0.00 0.00 0.00 2.24
2889 3287 4.298744 ACTTTGCTGAAGCTGTTTCTTC 57.701 40.909 3.61 0.00 42.04 2.87
2893 3291 2.874701 TGCTGAAGCTGTTTCTTCTGTC 59.125 45.455 3.61 5.61 42.15 3.51
2905 3303 5.163141 TGTTTCTTCTGTCCCCATCTTGTAA 60.163 40.000 0.00 0.00 0.00 2.41
2908 3306 6.139679 TCTTCTGTCCCCATCTTGTAAATT 57.860 37.500 0.00 0.00 0.00 1.82
2916 3314 6.206829 GTCCCCATCTTGTAAATTAGCCATAC 59.793 42.308 0.00 0.00 0.00 2.39
2925 3323 7.136822 TGTAAATTAGCCATACACTCCTGAT 57.863 36.000 0.00 0.00 0.00 2.90
2926 3324 6.992123 TGTAAATTAGCCATACACTCCTGATG 59.008 38.462 0.00 0.00 0.00 3.07
2927 3325 3.475566 TTAGCCATACACTCCTGATGC 57.524 47.619 0.00 0.00 0.00 3.91
2928 3326 1.206878 AGCCATACACTCCTGATGCA 58.793 50.000 0.00 0.00 0.00 3.96
2929 3327 1.773052 AGCCATACACTCCTGATGCAT 59.227 47.619 0.00 0.00 0.00 3.96
3335 3821 3.394836 GGACCTCCGGCAGAGCTT 61.395 66.667 0.00 0.00 41.74 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.109393 CTTCATCCGAAATTACTTATGGAAGAA 57.891 33.333 0.00 0.00 36.45 2.52
5 6 8.662781 TCTTCATCCGAAATTACTTATGGAAG 57.337 34.615 0.00 0.00 38.76 3.46
6 7 9.456147 TTTCTTCATCCGAAATTACTTATGGAA 57.544 29.630 0.00 0.00 0.00 3.53
7 8 8.889717 GTTTCTTCATCCGAAATTACTTATGGA 58.110 33.333 0.00 0.00 33.45 3.41
8 9 8.893727 AGTTTCTTCATCCGAAATTACTTATGG 58.106 33.333 0.00 0.00 33.45 2.74
39 40 9.409312 TCTCGTCAACGTTTGAAAGTTTATATA 57.591 29.630 0.00 0.00 42.15 0.86
40 41 8.219105 GTCTCGTCAACGTTTGAAAGTTTATAT 58.781 33.333 0.00 0.00 42.15 0.86
41 42 7.222417 TGTCTCGTCAACGTTTGAAAGTTTATA 59.778 33.333 0.00 0.00 42.15 0.98
42 43 6.036300 TGTCTCGTCAACGTTTGAAAGTTTAT 59.964 34.615 0.00 0.00 42.15 1.40
43 44 5.348179 TGTCTCGTCAACGTTTGAAAGTTTA 59.652 36.000 0.00 0.00 42.15 2.01
44 45 4.152759 TGTCTCGTCAACGTTTGAAAGTTT 59.847 37.500 0.00 0.00 42.15 2.66
47 48 3.543460 GGTGTCTCGTCAACGTTTGAAAG 60.543 47.826 0.00 2.21 42.15 2.62
52 53 2.132762 GATGGTGTCTCGTCAACGTTT 58.867 47.619 0.00 0.00 40.80 3.60
62 63 1.471119 TCCAGTACCGATGGTGTCTC 58.529 55.000 0.00 0.00 39.01 3.36
64 65 1.754803 TGATCCAGTACCGATGGTGTC 59.245 52.381 0.00 1.69 39.01 3.67
70 71 6.884295 TCTGAAATTTTTGATCCAGTACCGAT 59.116 34.615 0.00 0.00 0.00 4.18
72 73 6.494893 TCTGAAATTTTTGATCCAGTACCG 57.505 37.500 0.00 0.00 0.00 4.02
76 77 7.308229 CGTCTCTTCTGAAATTTTTGATCCAGT 60.308 37.037 0.00 0.00 0.00 4.00
84 85 7.862873 GGATGTTTCGTCTCTTCTGAAATTTTT 59.137 33.333 0.00 0.00 34.47 1.94
105 106 6.036083 CGTTTTGTGAAGATAATCTCGGATGT 59.964 38.462 0.00 0.00 0.00 3.06
106 107 6.255670 TCGTTTTGTGAAGATAATCTCGGATG 59.744 38.462 0.00 0.00 0.00 3.51
111 112 6.594159 TCCCTTCGTTTTGTGAAGATAATCTC 59.406 38.462 4.39 0.00 44.42 2.75
116 117 5.411361 CACATCCCTTCGTTTTGTGAAGATA 59.589 40.000 4.39 0.00 44.42 1.98
122 123 2.349438 CGACACATCCCTTCGTTTTGTG 60.349 50.000 0.00 0.00 42.53 3.33
124 125 1.871039 ACGACACATCCCTTCGTTTTG 59.129 47.619 0.00 0.00 43.23 2.44
150 151 8.973182 GGTGGAGGATAATATTTTGTTTTACCA 58.027 33.333 0.00 0.00 0.00 3.25
152 153 8.132995 CCGGTGGAGGATAATATTTTGTTTTAC 58.867 37.037 0.00 0.00 0.00 2.01
153 154 7.201839 GCCGGTGGAGGATAATATTTTGTTTTA 60.202 37.037 1.90 0.00 0.00 1.52
156 157 4.583073 GCCGGTGGAGGATAATATTTTGTT 59.417 41.667 1.90 0.00 0.00 2.83
171 172 0.601841 GAGAAGAAAACGCCGGTGGA 60.602 55.000 21.14 0.00 0.00 4.02
172 173 1.866925 GAGAAGAAAACGCCGGTGG 59.133 57.895 21.14 6.53 0.00 4.61
175 176 2.474712 GCGAGAAGAAAACGCCGG 59.525 61.111 0.00 0.00 45.35 6.13
190 191 3.135382 CTGTGATTGCTCGCTCGCG 62.135 63.158 0.00 0.00 41.35 5.87
191 192 2.699809 CTGTGATTGCTCGCTCGC 59.300 61.111 0.00 0.00 32.91 5.03
192 193 1.446792 ACCTGTGATTGCTCGCTCG 60.447 57.895 0.00 0.00 32.91 5.03
193 194 1.364626 CCACCTGTGATTGCTCGCTC 61.365 60.000 0.00 0.00 32.91 5.03
194 195 1.376424 CCACCTGTGATTGCTCGCT 60.376 57.895 0.00 0.00 32.91 4.93
225 226 0.234884 GGCGTTGAAAACTCTCACGG 59.765 55.000 0.00 0.00 46.99 4.94
290 291 1.893808 CGGTACAGCCATGCATCCC 60.894 63.158 0.00 0.00 36.97 3.85
291 292 1.153168 ACGGTACAGCCATGCATCC 60.153 57.895 0.00 0.00 36.97 3.51
292 293 1.439353 CCACGGTACAGCCATGCATC 61.439 60.000 0.00 0.00 36.97 3.91
293 294 1.451927 CCACGGTACAGCCATGCAT 60.452 57.895 0.00 0.00 36.97 3.96
369 375 9.635520 CCACGAGAGAGATAAAAGTAAGTAAAA 57.364 33.333 0.00 0.00 0.00 1.52
370 376 8.248945 CCCACGAGAGAGATAAAAGTAAGTAAA 58.751 37.037 0.00 0.00 0.00 2.01
371 377 7.147949 CCCCACGAGAGAGATAAAAGTAAGTAA 60.148 40.741 0.00 0.00 0.00 2.24
372 378 6.320672 CCCCACGAGAGAGATAAAAGTAAGTA 59.679 42.308 0.00 0.00 0.00 2.24
373 379 5.127356 CCCCACGAGAGAGATAAAAGTAAGT 59.873 44.000 0.00 0.00 0.00 2.24
374 380 5.360144 TCCCCACGAGAGAGATAAAAGTAAG 59.640 44.000 0.00 0.00 0.00 2.34
375 381 5.266788 TCCCCACGAGAGAGATAAAAGTAA 58.733 41.667 0.00 0.00 0.00 2.24
443 452 4.035102 GCCCGGTGCTCCTTCCTT 62.035 66.667 0.00 0.00 36.87 3.36
478 487 2.461695 GATTGACCTGACCTCTCTCCA 58.538 52.381 0.00 0.00 0.00 3.86
481 490 1.006043 TCGGATTGACCTGACCTCTCT 59.994 52.381 0.00 0.00 36.31 3.10
487 496 0.744874 TCGGATCGGATTGACCTGAC 59.255 55.000 0.00 0.00 36.31 3.51
488 497 0.744874 GTCGGATCGGATTGACCTGA 59.255 55.000 6.23 0.00 36.31 3.86
489 498 0.595053 CGTCGGATCGGATTGACCTG 60.595 60.000 6.23 0.00 36.31 4.00
490 499 1.734137 CGTCGGATCGGATTGACCT 59.266 57.895 6.23 0.00 36.31 3.85
491 500 1.949631 GCGTCGGATCGGATTGACC 60.950 63.158 6.23 2.44 0.00 4.02
604 617 9.540538 TCCCACTTTCATTTAATAATCTTCCAA 57.459 29.630 0.00 0.00 0.00 3.53
605 618 9.189156 CTCCCACTTTCATTTAATAATCTTCCA 57.811 33.333 0.00 0.00 0.00 3.53
606 619 8.138074 GCTCCCACTTTCATTTAATAATCTTCC 58.862 37.037 0.00 0.00 0.00 3.46
649 676 3.474600 TCCTCCGGTCTTATCTCGTAAG 58.525 50.000 0.00 0.00 40.99 2.34
689 716 1.238439 CTTTTGCTTTCGGAGGAGCA 58.762 50.000 12.34 12.34 43.05 4.26
730 758 2.125310 CCGCTAATCACGCCACCA 60.125 61.111 0.00 0.00 0.00 4.17
779 807 1.261619 CGCAGCAAACGAGAGAAGTTT 59.738 47.619 0.00 0.00 41.90 2.66
780 808 0.861837 CGCAGCAAACGAGAGAAGTT 59.138 50.000 0.00 0.00 0.00 2.66
781 809 0.032130 TCGCAGCAAACGAGAGAAGT 59.968 50.000 0.00 0.00 33.96 3.01
787 815 0.436531 GTCTCTTCGCAGCAAACGAG 59.563 55.000 0.00 0.00 41.18 4.18
788 816 0.249280 TGTCTCTTCGCAGCAAACGA 60.249 50.000 0.00 0.00 37.86 3.85
791 819 0.518636 GCATGTCTCTTCGCAGCAAA 59.481 50.000 0.00 0.00 0.00 3.68
794 822 1.714414 CTGCATGTCTCTTCGCAGC 59.286 57.895 0.00 0.00 44.69 5.25
797 825 1.742880 TGGCTGCATGTCTCTTCGC 60.743 57.895 0.50 0.00 0.00 4.70
798 826 1.690283 CGTGGCTGCATGTCTCTTCG 61.690 60.000 0.50 0.00 0.00 3.79
799 827 1.364626 CCGTGGCTGCATGTCTCTTC 61.365 60.000 0.50 0.00 0.00 2.87
800 828 1.376424 CCGTGGCTGCATGTCTCTT 60.376 57.895 0.50 0.00 0.00 2.85
801 829 2.267006 CCGTGGCTGCATGTCTCT 59.733 61.111 0.50 0.00 0.00 3.10
802 830 3.503363 GCCGTGGCTGCATGTCTC 61.503 66.667 2.98 0.00 38.26 3.36
829 1005 6.052405 CAGGAATTGGAATTGGATGGAAAA 57.948 37.500 0.00 0.00 0.00 2.29
844 1020 2.204865 TACGTGGGCCCCAGGAATTG 62.205 60.000 28.49 5.08 41.36 2.32
845 1021 1.921869 CTACGTGGGCCCCAGGAATT 61.922 60.000 28.49 9.31 41.36 2.17
846 1022 2.285818 TACGTGGGCCCCAGGAAT 60.286 61.111 28.49 10.06 41.36 3.01
847 1023 3.006728 CTACGTGGGCCCCAGGAA 61.007 66.667 28.49 3.50 41.36 3.36
854 1030 1.140375 CGGTAAGACTACGTGGGCC 59.860 63.158 0.00 0.00 0.00 5.80
863 1042 1.988406 GCCCAGGTCCGGTAAGACT 60.988 63.158 0.00 0.00 36.95 3.24
872 1051 3.319198 TTCACGAGGCCCAGGTCC 61.319 66.667 0.00 0.00 0.00 4.46
873 1052 2.047179 GTTCACGAGGCCCAGGTC 60.047 66.667 0.00 0.00 0.00 3.85
876 1063 2.030562 AACGTTCACGAGGCCCAG 59.969 61.111 6.30 0.00 43.02 4.45
899 1086 2.351418 TCACGTGAGAAAACACAGCAAG 59.649 45.455 15.76 0.00 40.34 4.01
905 1092 3.863424 TCTCAAGTCACGTGAGAAAACAC 59.137 43.478 19.74 5.78 46.57 3.32
953 1167 3.743899 GCCTCATCCAATCCTCTCAAGTC 60.744 52.174 0.00 0.00 0.00 3.01
959 1173 1.449353 GCGCCTCATCCAATCCTCT 59.551 57.895 0.00 0.00 0.00 3.69
961 1175 2.109799 CGCGCCTCATCCAATCCT 59.890 61.111 0.00 0.00 0.00 3.24
1004 1229 4.353437 GCTTGCTTGCTTGCGCCT 62.353 61.111 4.18 0.00 35.36 5.52
1008 1233 3.103911 CGCTGCTTGCTTGCTTGC 61.104 61.111 0.00 6.55 40.11 4.01
1009 1234 1.728426 GTCGCTGCTTGCTTGCTTG 60.728 57.895 0.00 0.00 40.11 4.01
1010 1235 2.188829 TGTCGCTGCTTGCTTGCTT 61.189 52.632 0.00 0.00 40.11 3.91
1011 1236 2.592574 TGTCGCTGCTTGCTTGCT 60.593 55.556 0.00 0.00 40.11 3.91
1012 1237 2.428071 GTGTCGCTGCTTGCTTGC 60.428 61.111 0.00 0.00 40.11 4.01
1013 1238 2.127496 CGTGTCGCTGCTTGCTTG 60.127 61.111 0.00 0.00 40.11 4.01
1058 1315 1.812922 CTGTCTGGCGATGCTGTCC 60.813 63.158 0.00 0.00 0.00 4.02
1186 1464 4.801330 ATGATTCACACCGAACTCACTA 57.199 40.909 0.00 0.00 36.12 2.74
1197 1475 1.133790 GCTGGAGCCAATGATTCACAC 59.866 52.381 0.00 0.00 34.31 3.82
1199 1477 1.760192 AGCTGGAGCCAATGATTCAC 58.240 50.000 0.00 0.00 43.38 3.18
1206 1484 1.438469 TATGCCTAGCTGGAGCCAAT 58.562 50.000 0.00 0.00 43.38 3.16
1209 1487 1.206849 GAGATATGCCTAGCTGGAGCC 59.793 57.143 0.00 0.00 43.38 4.70
1216 1495 4.381825 CCATCAGACAGAGATATGCCTAGC 60.382 50.000 0.00 0.00 0.00 3.42
1225 1504 5.010516 CGAGGAATAACCATCAGACAGAGAT 59.989 44.000 0.00 0.00 42.04 2.75
1246 1525 2.765108 ATACGCATCAGACAGACGAG 57.235 50.000 0.00 0.00 0.00 4.18
1247 1526 2.538939 CGAATACGCATCAGACAGACGA 60.539 50.000 0.00 0.00 0.00 4.20
1248 1527 1.775770 CGAATACGCATCAGACAGACG 59.224 52.381 0.00 0.00 0.00 4.18
1249 1528 2.120232 CCGAATACGCATCAGACAGAC 58.880 52.381 0.00 0.00 38.29 3.51
1261 1548 4.164294 ACTCGAGAGTTTTTCCGAATACG 58.836 43.478 21.68 0.00 38.83 3.06
1263 1550 5.640189 AGACTCGAGAGTTTTTCCGAATA 57.360 39.130 21.68 0.00 42.66 1.75
1265 1552 4.758674 TCTAGACTCGAGAGTTTTTCCGAA 59.241 41.667 21.68 0.00 42.66 4.30
1266 1553 4.321718 TCTAGACTCGAGAGTTTTTCCGA 58.678 43.478 21.68 2.02 42.66 4.55
1267 1554 4.681835 TCTAGACTCGAGAGTTTTTCCG 57.318 45.455 21.68 0.00 42.66 4.30
1268 1555 5.740099 CGATTCTAGACTCGAGAGTTTTTCC 59.260 44.000 23.78 1.67 42.66 3.13
1269 1556 6.249682 CACGATTCTAGACTCGAGAGTTTTTC 59.750 42.308 31.68 4.75 42.66 2.29
1270 1557 6.072618 TCACGATTCTAGACTCGAGAGTTTTT 60.073 38.462 31.68 10.07 42.66 1.94
1271 1558 5.411977 TCACGATTCTAGACTCGAGAGTTTT 59.588 40.000 31.68 10.71 42.66 2.43
1272 1559 4.936411 TCACGATTCTAGACTCGAGAGTTT 59.064 41.667 31.68 11.34 42.66 2.66
1273 1560 4.330620 GTCACGATTCTAGACTCGAGAGTT 59.669 45.833 31.68 11.98 42.66 3.01
1279 1567 3.972950 ATGGTCACGATTCTAGACTCG 57.027 47.619 25.64 25.64 40.62 4.18
1299 1587 3.170717 ACTCAGAGTTCGGGGTTTCATA 58.829 45.455 0.00 0.00 0.00 2.15
1300 1588 1.978580 ACTCAGAGTTCGGGGTTTCAT 59.021 47.619 0.00 0.00 0.00 2.57
1301 1589 1.420430 ACTCAGAGTTCGGGGTTTCA 58.580 50.000 0.00 0.00 0.00 2.69
1325 1613 1.338105 GCACACTGACTGGACTATGCA 60.338 52.381 0.00 0.00 0.00 3.96
1348 1636 5.518812 TGACCAATGAACAGAACAAAATCG 58.481 37.500 0.00 0.00 0.00 3.34
1349 1637 7.769272 TTTGACCAATGAACAGAACAAAATC 57.231 32.000 0.00 0.00 0.00 2.17
1382 1671 3.608316 AGAAAAACAAGCCAGTGCAAA 57.392 38.095 0.00 0.00 41.13 3.68
1385 1674 3.990318 AGTAGAAAAACAAGCCAGTGC 57.010 42.857 0.00 0.00 37.95 4.40
1386 1675 5.179555 GGAGTAGTAGAAAAACAAGCCAGTG 59.820 44.000 0.00 0.00 0.00 3.66
1387 1676 5.071923 AGGAGTAGTAGAAAAACAAGCCAGT 59.928 40.000 0.00 0.00 0.00 4.00
1388 1677 5.552178 AGGAGTAGTAGAAAAACAAGCCAG 58.448 41.667 0.00 0.00 0.00 4.85
1389 1678 5.562298 AGGAGTAGTAGAAAAACAAGCCA 57.438 39.130 0.00 0.00 0.00 4.75
1413 1704 2.032799 CAGAGTTAGCTAGTGCCTCTCG 59.967 54.545 9.89 5.07 40.80 4.04
1414 1705 3.020984 ACAGAGTTAGCTAGTGCCTCTC 58.979 50.000 9.89 5.99 40.80 3.20
1415 1706 3.020984 GACAGAGTTAGCTAGTGCCTCT 58.979 50.000 0.00 1.40 40.80 3.69
1416 1707 2.223386 CGACAGAGTTAGCTAGTGCCTC 60.223 54.545 0.00 0.00 40.80 4.70
1420 1711 2.732597 GCACCGACAGAGTTAGCTAGTG 60.733 54.545 0.00 0.00 0.00 2.74
1441 1732 4.639310 CCCTGTGAATTTTCCTCTGATGAG 59.361 45.833 0.00 0.00 39.92 2.90
1623 1993 3.207669 GAATGGCAGCGAGCTGGG 61.208 66.667 24.25 2.77 43.77 4.45
1656 2026 2.432628 GCACGGACGAGGGAACTG 60.433 66.667 0.00 0.00 44.43 3.16
1812 2182 0.395311 TCGATCCTTGGGTACGCTCT 60.395 55.000 11.59 0.00 0.00 4.09
1823 2193 4.162690 GCCGTGGCCTCGATCCTT 62.163 66.667 27.84 0.00 34.56 3.36
1904 2274 3.369451 CCCAAACGTGACCAAAACAAAAG 59.631 43.478 0.00 0.00 0.00 2.27
1906 2276 2.299297 ACCCAAACGTGACCAAAACAAA 59.701 40.909 0.00 0.00 0.00 2.83
1907 2277 1.893801 ACCCAAACGTGACCAAAACAA 59.106 42.857 0.00 0.00 0.00 2.83
1910 2280 2.561419 TGAAACCCAAACGTGACCAAAA 59.439 40.909 0.00 0.00 0.00 2.44
1912 2282 1.835494 TGAAACCCAAACGTGACCAA 58.165 45.000 0.00 0.00 0.00 3.67
1913 2283 1.473278 GTTGAAACCCAAACGTGACCA 59.527 47.619 0.00 0.00 36.36 4.02
1914 2284 1.202325 GGTTGAAACCCAAACGTGACC 60.202 52.381 0.36 0.00 43.43 4.02
1915 2285 2.197792 GGTTGAAACCCAAACGTGAC 57.802 50.000 0.36 0.00 43.43 3.67
1929 2313 1.550327 TTGTTGTTGCTGGTGGTTGA 58.450 45.000 0.00 0.00 0.00 3.18
1942 2330 4.156556 ACGATAGCAGCATCAAATTGTTGT 59.843 37.500 6.00 0.00 42.67 3.32
1959 2347 5.004821 CACACTTGTTAGCAGCTAACGATAG 59.995 44.000 31.19 27.98 46.40 2.08
1960 2348 4.862574 CACACTTGTTAGCAGCTAACGATA 59.137 41.667 31.19 21.08 46.40 2.92
1961 2349 3.679980 CACACTTGTTAGCAGCTAACGAT 59.320 43.478 31.19 20.25 46.40 3.73
1962 2350 3.057019 CACACTTGTTAGCAGCTAACGA 58.943 45.455 31.19 29.15 46.40 3.85
1963 2351 2.800544 ACACACTTGTTAGCAGCTAACG 59.199 45.455 31.19 23.08 46.40 3.18
1964 2352 4.511826 AGAACACACTTGTTAGCAGCTAAC 59.488 41.667 30.96 30.96 46.43 2.34
1967 2355 3.134458 GAGAACACACTTGTTAGCAGCT 58.866 45.455 0.00 0.00 46.43 4.24
1968 2356 3.134458 AGAGAACACACTTGTTAGCAGC 58.866 45.455 0.00 0.00 46.43 5.25
1971 2359 4.686554 CAGGTAGAGAACACACTTGTTAGC 59.313 45.833 0.00 0.00 46.43 3.09
1972 2360 5.844004 ACAGGTAGAGAACACACTTGTTAG 58.156 41.667 0.00 0.00 46.43 2.34
1973 2361 5.221382 GGACAGGTAGAGAACACACTTGTTA 60.221 44.000 0.00 0.00 46.43 2.41
1975 2363 3.069729 GGACAGGTAGAGAACACACTTGT 59.930 47.826 0.00 0.00 35.48 3.16
1976 2364 3.555168 GGGACAGGTAGAGAACACACTTG 60.555 52.174 0.00 0.00 0.00 3.16
1977 2365 2.633481 GGGACAGGTAGAGAACACACTT 59.367 50.000 0.00 0.00 0.00 3.16
1978 2366 2.158295 AGGGACAGGTAGAGAACACACT 60.158 50.000 0.00 0.00 0.00 3.55
1979 2367 2.028930 CAGGGACAGGTAGAGAACACAC 60.029 54.545 0.00 0.00 0.00 3.82
1980 2368 2.158370 TCAGGGACAGGTAGAGAACACA 60.158 50.000 0.00 0.00 0.00 3.72
1981 2369 2.231721 GTCAGGGACAGGTAGAGAACAC 59.768 54.545 0.00 0.00 32.09 3.32
1982 2370 2.110188 AGTCAGGGACAGGTAGAGAACA 59.890 50.000 0.00 0.00 34.60 3.18
1983 2371 2.810164 AGTCAGGGACAGGTAGAGAAC 58.190 52.381 0.00 0.00 34.60 3.01
1984 2372 3.076182 AGAAGTCAGGGACAGGTAGAGAA 59.924 47.826 0.00 0.00 34.60 2.87
1985 2373 2.650322 AGAAGTCAGGGACAGGTAGAGA 59.350 50.000 0.00 0.00 34.60 3.10
1986 2374 3.094484 AGAAGTCAGGGACAGGTAGAG 57.906 52.381 0.00 0.00 34.60 2.43
1987 2375 3.544698 AAGAAGTCAGGGACAGGTAGA 57.455 47.619 0.00 0.00 34.60 2.59
1988 2376 3.866449 GCAAAGAAGTCAGGGACAGGTAG 60.866 52.174 0.00 0.00 34.60 3.18
1989 2377 2.038557 GCAAAGAAGTCAGGGACAGGTA 59.961 50.000 0.00 0.00 34.60 3.08
1990 2378 1.202818 GCAAAGAAGTCAGGGACAGGT 60.203 52.381 0.00 0.00 34.60 4.00
1991 2379 1.072965 AGCAAAGAAGTCAGGGACAGG 59.927 52.381 0.00 0.00 34.60 4.00
1992 2380 2.421619 GAGCAAAGAAGTCAGGGACAG 58.578 52.381 0.00 0.00 34.60 3.51
1993 2381 1.270305 CGAGCAAAGAAGTCAGGGACA 60.270 52.381 0.00 0.00 34.60 4.02
1994 2382 1.433534 CGAGCAAAGAAGTCAGGGAC 58.566 55.000 0.00 0.00 0.00 4.46
1995 2383 0.320771 GCGAGCAAAGAAGTCAGGGA 60.321 55.000 0.00 0.00 0.00 4.20
1996 2384 1.301677 GGCGAGCAAAGAAGTCAGGG 61.302 60.000 0.00 0.00 0.00 4.45
1997 2385 0.321122 AGGCGAGCAAAGAAGTCAGG 60.321 55.000 0.00 0.00 0.00 3.86
1998 2386 0.795085 CAGGCGAGCAAAGAAGTCAG 59.205 55.000 0.00 0.00 0.00 3.51
1999 2387 1.230635 GCAGGCGAGCAAAGAAGTCA 61.231 55.000 0.00 0.00 0.00 3.41
2000 2388 0.952984 AGCAGGCGAGCAAAGAAGTC 60.953 55.000 7.67 0.00 36.85 3.01
2001 2389 0.321671 TAGCAGGCGAGCAAAGAAGT 59.678 50.000 7.67 0.00 36.85 3.01
2002 2390 0.723981 GTAGCAGGCGAGCAAAGAAG 59.276 55.000 7.67 0.00 36.85 2.85
2003 2391 0.034756 TGTAGCAGGCGAGCAAAGAA 59.965 50.000 7.67 0.00 36.85 2.52
2004 2392 0.390340 CTGTAGCAGGCGAGCAAAGA 60.390 55.000 7.67 0.00 36.85 2.52
2005 2393 0.671781 ACTGTAGCAGGCGAGCAAAG 60.672 55.000 7.67 4.45 35.51 2.77
2006 2394 0.606096 TACTGTAGCAGGCGAGCAAA 59.394 50.000 7.67 0.00 35.51 3.68
2007 2395 0.108804 GTACTGTAGCAGGCGAGCAA 60.109 55.000 7.67 0.00 35.51 3.91
2008 2396 1.248101 TGTACTGTAGCAGGCGAGCA 61.248 55.000 7.67 0.00 35.51 4.26
2009 2397 0.108804 TTGTACTGTAGCAGGCGAGC 60.109 55.000 0.00 0.00 35.51 5.03
2010 2398 2.196749 CATTGTACTGTAGCAGGCGAG 58.803 52.381 0.00 0.00 35.51 5.03
2011 2399 1.134818 CCATTGTACTGTAGCAGGCGA 60.135 52.381 0.00 0.00 35.51 5.54
2012 2400 1.290203 CCATTGTACTGTAGCAGGCG 58.710 55.000 0.00 0.00 35.51 5.52
2013 2401 1.017387 GCCATTGTACTGTAGCAGGC 58.983 55.000 0.00 5.21 35.51 4.85
2014 2402 2.009774 GTGCCATTGTACTGTAGCAGG 58.990 52.381 0.00 0.00 35.51 4.85
2015 2403 1.660607 CGTGCCATTGTACTGTAGCAG 59.339 52.381 0.00 0.00 37.52 4.24
2016 2404 1.674519 CCGTGCCATTGTACTGTAGCA 60.675 52.381 0.00 0.00 0.00 3.49
2020 2408 2.032634 CGCCGTGCCATTGTACTGT 61.033 57.895 0.00 0.00 0.00 3.55
2056 2444 0.036022 GCCTGTTGGAGCAGAAGACT 59.964 55.000 0.00 0.00 38.70 3.24
2143 2531 4.148825 GGGTCGCCGCAGATGTCT 62.149 66.667 0.00 0.00 0.00 3.41
2146 2534 4.899239 GGAGGGTCGCCGCAGATG 62.899 72.222 0.00 0.00 0.00 2.90
2190 2578 2.033141 ACCGACGACGAAGGAGGA 59.967 61.111 17.38 0.00 42.66 3.71
2193 2581 1.898094 TTGGACCGACGACGAAGGA 60.898 57.895 17.38 0.00 42.66 3.36
2263 2656 1.581934 CCGACAACAAACAGCTCAGA 58.418 50.000 0.00 0.00 0.00 3.27
2264 2657 0.040958 GCCGACAACAAACAGCTCAG 60.041 55.000 0.00 0.00 0.00 3.35
2296 2691 4.124943 CTCCCCGACCCTCCGAGA 62.125 72.222 0.00 0.00 0.00 4.04
2376 2771 1.032657 TCTTCTCCCCTCGAGCGAAG 61.033 60.000 6.99 14.56 38.62 3.79
2450 2845 3.606972 AGCCTCCCAAGGATCTCATAAT 58.393 45.455 0.00 0.00 46.67 1.28
2527 2922 3.470709 TCACAGAGCAAAGAACTTCCTG 58.529 45.455 0.00 0.00 0.00 3.86
2536 2931 4.233123 TCAAGCAATTCACAGAGCAAAG 57.767 40.909 0.00 0.00 0.00 2.77
2571 2966 3.256136 ACCAAGTAGTCCGAGCTATATGC 59.744 47.826 0.00 0.00 43.29 3.14
2572 2967 6.761099 ATACCAAGTAGTCCGAGCTATATG 57.239 41.667 0.00 0.00 0.00 1.78
2573 2968 7.450634 TGAAATACCAAGTAGTCCGAGCTATAT 59.549 37.037 0.00 0.00 0.00 0.86
2574 2969 6.774170 TGAAATACCAAGTAGTCCGAGCTATA 59.226 38.462 0.00 0.00 0.00 1.31
2585 2980 6.500684 AACATGCTGTGAAATACCAAGTAG 57.499 37.500 0.00 0.00 0.00 2.57
2592 2987 9.869844 CTAGCTTAATAACATGCTGTGAAATAC 57.130 33.333 0.00 0.00 37.02 1.89
2616 3013 5.852282 TGATTCTCGGTGATGATTGTCTA 57.148 39.130 0.00 0.00 0.00 2.59
2636 3033 5.559770 TGACAGTGGAGAAGCATTTTATGA 58.440 37.500 0.00 0.00 0.00 2.15
2646 3043 8.352201 TGTTTATTTGAAATGACAGTGGAGAAG 58.648 33.333 0.00 0.00 0.00 2.85
2692 3089 2.159254 TGCAAAGCCTTTGTGTGTTCTC 60.159 45.455 17.88 0.29 42.56 2.87
2722 3119 8.960591 CCCCTCTAATAATAAAATGGTATGCTG 58.039 37.037 0.00 0.00 0.00 4.41
2723 3120 8.116026 CCCCCTCTAATAATAAAATGGTATGCT 58.884 37.037 0.00 0.00 0.00 3.79
2724 3121 8.293699 CCCCCTCTAATAATAAAATGGTATGC 57.706 38.462 0.00 0.00 0.00 3.14
2748 3146 2.562298 TGAATGTTGAATTGGCTGTCCC 59.438 45.455 0.00 0.00 0.00 4.46
2749 3147 3.940209 TGAATGTTGAATTGGCTGTCC 57.060 42.857 0.00 0.00 0.00 4.02
2750 3148 4.860907 GTGATGAATGTTGAATTGGCTGTC 59.139 41.667 0.00 0.00 0.00 3.51
2754 3152 4.178540 CCAGTGATGAATGTTGAATTGGC 58.821 43.478 0.00 0.00 0.00 4.52
2756 3154 5.184479 AGTCCCAGTGATGAATGTTGAATTG 59.816 40.000 0.00 0.00 0.00 2.32
2762 3160 2.915604 AGGAGTCCCAGTGATGAATGTT 59.084 45.455 5.25 0.00 33.88 2.71
2769 3167 7.306013 TCTGTAATATAAGGAGTCCCAGTGAT 58.694 38.462 5.25 0.00 33.88 3.06
2770 3168 6.679542 TCTGTAATATAAGGAGTCCCAGTGA 58.320 40.000 5.25 0.00 33.88 3.41
2771 3169 6.778069 TCTCTGTAATATAAGGAGTCCCAGTG 59.222 42.308 5.25 4.73 33.88 3.66
2772 3170 6.778559 GTCTCTGTAATATAAGGAGTCCCAGT 59.221 42.308 5.25 0.00 33.88 4.00
2773 3171 7.007723 AGTCTCTGTAATATAAGGAGTCCCAG 58.992 42.308 5.25 3.50 33.88 4.45
2774 3172 6.923670 AGTCTCTGTAATATAAGGAGTCCCA 58.076 40.000 5.25 0.00 33.88 4.37
2775 3173 7.005296 TGAGTCTCTGTAATATAAGGAGTCCC 58.995 42.308 5.25 0.00 0.00 4.46
2776 3174 8.466617 TTGAGTCTCTGTAATATAAGGAGTCC 57.533 38.462 0.00 0.00 0.00 3.85
2787 3185 6.013379 TCACTGGGAAATTGAGTCTCTGTAAT 60.013 38.462 0.65 0.00 0.00 1.89
2796 3194 3.650942 TGTAGGTCACTGGGAAATTGAGT 59.349 43.478 0.00 0.00 0.00 3.41
2805 3203 3.515502 TCTGAAGAATGTAGGTCACTGGG 59.484 47.826 0.00 0.00 0.00 4.45
2806 3204 4.808414 TCTGAAGAATGTAGGTCACTGG 57.192 45.455 0.00 0.00 0.00 4.00
2812 3210 8.986991 AGATGAACTAATCTGAAGAATGTAGGT 58.013 33.333 0.00 0.00 35.54 3.08
2845 3243 7.835822 AGTATGCTATCTTAACTGCTATCTGG 58.164 38.462 0.00 0.00 0.00 3.86
2871 3269 3.282021 ACAGAAGAAACAGCTTCAGCAA 58.718 40.909 0.75 0.00 45.21 3.91
2893 3291 6.016276 GTGTATGGCTAATTTACAAGATGGGG 60.016 42.308 0.00 0.00 0.00 4.96
2905 3303 4.141413 TGCATCAGGAGTGTATGGCTAATT 60.141 41.667 0.00 0.00 0.00 1.40
2908 3306 2.397597 TGCATCAGGAGTGTATGGCTA 58.602 47.619 0.00 0.00 0.00 3.93
2925 3323 2.516906 TCTTGCAATTGACTCCATGCA 58.483 42.857 10.34 0.00 46.21 3.96
2926 3324 3.581024 TTCTTGCAATTGACTCCATGC 57.419 42.857 10.34 0.00 39.22 4.06
2927 3325 4.240096 GGTTTCTTGCAATTGACTCCATG 58.760 43.478 10.34 0.25 0.00 3.66
2928 3326 3.896888 TGGTTTCTTGCAATTGACTCCAT 59.103 39.130 10.34 0.00 0.00 3.41
2929 3327 3.068024 GTGGTTTCTTGCAATTGACTCCA 59.932 43.478 10.34 3.54 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.