Multiple sequence alignment - TraesCS4D01G284900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G284900 chr4D 100.000 3536 0 0 1 3536 455756120 455759655 0.000000e+00 6530.0
1 TraesCS4D01G284900 chr4D 83.013 312 52 1 412 722 328542816 328542505 7.470000e-72 281.0
2 TraesCS4D01G284900 chr4D 100.000 65 0 0 3472 3536 98932840 98932904 1.720000e-23 121.0
3 TraesCS4D01G284900 chr4A 88.713 2658 183 48 855 3473 11776248 11773669 0.000000e+00 3138.0
4 TraesCS4D01G284900 chr4A 89.677 155 8 3 174 327 11777730 11777583 1.300000e-44 191.0
5 TraesCS4D01G284900 chr4A 90.526 95 9 0 25 119 11784558 11784464 3.710000e-25 126.0
6 TraesCS4D01G284900 chr4A 83.673 98 8 2 738 827 11776337 11776240 6.290000e-13 86.1
7 TraesCS4D01G284900 chr4B 91.229 2018 117 21 831 2821 569761849 569763833 0.000000e+00 2691.0
8 TraesCS4D01G284900 chr4B 84.735 642 45 32 2865 3474 569763825 569764445 8.450000e-166 593.0
9 TraesCS4D01G284900 chr4B 85.326 184 8 10 114 294 569760396 569760563 4.690000e-39 172.0
10 TraesCS4D01G284900 chr4B 96.552 58 1 1 736 793 569761800 569761856 1.040000e-15 95.3
11 TraesCS4D01G284900 chr2B 85.759 316 45 0 412 727 569020221 569020536 5.660000e-88 335.0
12 TraesCS4D01G284900 chr5A 85.531 311 38 5 412 720 671167003 671166698 5.700000e-83 318.0
13 TraesCS4D01G284900 chr5A 92.982 57 4 0 3472 3528 559089244 559089300 2.260000e-12 84.2
14 TraesCS4D01G284900 chr7B 84.906 318 42 4 409 724 118120481 118120168 2.050000e-82 316.0
15 TraesCS4D01G284900 chr3B 84.071 339 42 9 404 737 117922709 117922378 2.050000e-82 316.0
16 TraesCS4D01G284900 chr3B 82.428 313 50 5 409 720 636120928 636120620 5.820000e-68 268.0
17 TraesCS4D01G284900 chr5B 84.839 310 40 4 412 719 591646719 591647023 4.430000e-79 305.0
18 TraesCS4D01G284900 chr5B 82.840 338 48 8 412 745 528574281 528574612 9.600000e-76 294.0
19 TraesCS4D01G284900 chr2A 82.727 330 44 10 412 737 502621628 502621948 7.470000e-72 281.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G284900 chr4D 455756120 455759655 3535 False 6530.000000 6530 100.000000 1 3536 1 chr4D.!!$F2 3535
1 TraesCS4D01G284900 chr4A 11773669 11777730 4061 True 1138.366667 3138 87.354333 174 3473 3 chr4A.!!$R2 3299
2 TraesCS4D01G284900 chr4B 569760396 569764445 4049 False 887.825000 2691 89.460500 114 3474 4 chr4B.!!$F1 3360

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.034574 TGCCTCGTATGCCCATTGTT 60.035 50.0 0.0 0.0 0.00 2.83 F
1009 2587 0.248417 CAGCCAGACGATGAGACGAG 60.248 60.0 0.0 0.0 37.03 4.18 F
1414 2998 0.734253 CTTCGTCCTCAAGTCCTGCG 60.734 60.0 0.0 0.0 0.00 5.18 F
1696 3298 0.878523 TGTCGTTTCTTGGACTGCGG 60.879 55.0 0.0 0.0 34.31 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1437 3021 0.822164 CGTGGAGGTCGGAAGGTAAT 59.178 55.0 0.00 0.0 0.0 1.89 R
2079 3681 0.036010 CAAGAAGCGTCACCCCATCT 60.036 55.0 1.61 0.0 0.0 2.90 R
2309 3911 0.602638 CCGACAAGCACCAAGTAGCA 60.603 55.0 0.00 0.0 0.0 3.49 R
3514 5157 0.175760 TACTGAATGCCACTCCGCTC 59.824 55.0 0.00 0.0 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.842069 AGCGAGGGAAAACCCTTTT 57.158 47.368 9.28 0.00 40.79 2.27
19 20 2.082140 AGCGAGGGAAAACCCTTTTT 57.918 45.000 9.28 0.00 40.79 1.94
20 21 1.961394 AGCGAGGGAAAACCCTTTTTC 59.039 47.619 9.28 0.00 46.88 2.29
32 33 8.547967 GAAAACCCTTTTTCAGAAAAACTTCT 57.452 30.769 15.81 0.92 46.84 2.85
33 34 8.547967 AAAACCCTTTTTCAGAAAAACTTCTC 57.452 30.769 15.81 0.00 35.57 2.87
34 35 6.850752 ACCCTTTTTCAGAAAAACTTCTCA 57.149 33.333 15.81 0.00 35.57 3.27
35 36 7.239763 ACCCTTTTTCAGAAAAACTTCTCAA 57.760 32.000 15.81 0.00 35.57 3.02
36 37 7.676004 ACCCTTTTTCAGAAAAACTTCTCAAA 58.324 30.769 15.81 0.00 35.57 2.69
37 38 8.321353 ACCCTTTTTCAGAAAAACTTCTCAAAT 58.679 29.630 15.81 0.00 35.57 2.32
38 39 8.820933 CCCTTTTTCAGAAAAACTTCTCAAATC 58.179 33.333 15.81 0.00 35.57 2.17
39 40 9.369904 CCTTTTTCAGAAAAACTTCTCAAATCA 57.630 29.630 15.81 0.00 35.57 2.57
45 46 9.520204 TCAGAAAAACTTCTCAAATCATTCAAC 57.480 29.630 0.00 0.00 0.00 3.18
46 47 9.525409 CAGAAAAACTTCTCAAATCATTCAACT 57.475 29.630 0.00 0.00 0.00 3.16
47 48 9.525409 AGAAAAACTTCTCAAATCATTCAACTG 57.475 29.630 0.00 0.00 0.00 3.16
48 49 7.704789 AAAACTTCTCAAATCATTCAACTGC 57.295 32.000 0.00 0.00 0.00 4.40
49 50 5.382618 ACTTCTCAAATCATTCAACTGCC 57.617 39.130 0.00 0.00 0.00 4.85
50 51 5.075493 ACTTCTCAAATCATTCAACTGCCT 58.925 37.500 0.00 0.00 0.00 4.75
51 52 5.182760 ACTTCTCAAATCATTCAACTGCCTC 59.817 40.000 0.00 0.00 0.00 4.70
52 53 3.686241 TCTCAAATCATTCAACTGCCTCG 59.314 43.478 0.00 0.00 0.00 4.63
53 54 3.411446 TCAAATCATTCAACTGCCTCGT 58.589 40.909 0.00 0.00 0.00 4.18
54 55 4.574892 TCAAATCATTCAACTGCCTCGTA 58.425 39.130 0.00 0.00 0.00 3.43
55 56 5.185454 TCAAATCATTCAACTGCCTCGTAT 58.815 37.500 0.00 0.00 0.00 3.06
56 57 5.065090 TCAAATCATTCAACTGCCTCGTATG 59.935 40.000 0.00 0.00 0.00 2.39
57 58 2.279741 TCATTCAACTGCCTCGTATGC 58.720 47.619 0.00 0.00 0.00 3.14
58 59 1.331756 CATTCAACTGCCTCGTATGCC 59.668 52.381 0.00 0.00 0.00 4.40
59 60 0.392461 TTCAACTGCCTCGTATGCCC 60.392 55.000 0.00 0.00 0.00 5.36
60 61 1.078497 CAACTGCCTCGTATGCCCA 60.078 57.895 0.00 0.00 0.00 5.36
61 62 0.464373 CAACTGCCTCGTATGCCCAT 60.464 55.000 0.00 0.00 0.00 4.00
62 63 0.255890 AACTGCCTCGTATGCCCATT 59.744 50.000 0.00 0.00 0.00 3.16
63 64 0.464373 ACTGCCTCGTATGCCCATTG 60.464 55.000 0.00 0.00 0.00 2.82
64 65 0.464373 CTGCCTCGTATGCCCATTGT 60.464 55.000 0.00 0.00 0.00 2.71
65 66 0.034574 TGCCTCGTATGCCCATTGTT 60.035 50.000 0.00 0.00 0.00 2.83
66 67 1.102978 GCCTCGTATGCCCATTGTTT 58.897 50.000 0.00 0.00 0.00 2.83
67 68 2.294074 GCCTCGTATGCCCATTGTTTA 58.706 47.619 0.00 0.00 0.00 2.01
68 69 2.290641 GCCTCGTATGCCCATTGTTTAG 59.709 50.000 0.00 0.00 0.00 1.85
69 70 2.290641 CCTCGTATGCCCATTGTTTAGC 59.709 50.000 0.00 0.00 0.00 3.09
70 71 2.290641 CTCGTATGCCCATTGTTTAGCC 59.709 50.000 0.00 0.00 0.00 3.93
71 72 2.020720 CGTATGCCCATTGTTTAGCCA 58.979 47.619 0.00 0.00 0.00 4.75
72 73 2.622942 CGTATGCCCATTGTTTAGCCAT 59.377 45.455 0.00 0.00 0.00 4.40
73 74 3.304659 CGTATGCCCATTGTTTAGCCATC 60.305 47.826 0.00 0.00 0.00 3.51
74 75 2.530460 TGCCCATTGTTTAGCCATCT 57.470 45.000 0.00 0.00 0.00 2.90
75 76 2.818921 TGCCCATTGTTTAGCCATCTT 58.181 42.857 0.00 0.00 0.00 2.40
76 77 2.760092 TGCCCATTGTTTAGCCATCTTC 59.240 45.455 0.00 0.00 0.00 2.87
77 78 3.026694 GCCCATTGTTTAGCCATCTTCT 58.973 45.455 0.00 0.00 0.00 2.85
78 79 4.207165 GCCCATTGTTTAGCCATCTTCTA 58.793 43.478 0.00 0.00 0.00 2.10
79 80 4.644685 GCCCATTGTTTAGCCATCTTCTAA 59.355 41.667 0.00 0.00 0.00 2.10
80 81 5.127031 GCCCATTGTTTAGCCATCTTCTAAA 59.873 40.000 0.00 0.00 34.65 1.85
81 82 6.681368 GCCCATTGTTTAGCCATCTTCTAAAG 60.681 42.308 0.00 0.00 36.88 1.85
82 83 6.183360 CCCATTGTTTAGCCATCTTCTAAAGG 60.183 42.308 0.00 0.00 36.88 3.11
83 84 6.378280 CCATTGTTTAGCCATCTTCTAAAGGT 59.622 38.462 0.00 0.00 36.88 3.50
84 85 7.415653 CCATTGTTTAGCCATCTTCTAAAGGTC 60.416 40.741 0.00 0.00 36.88 3.85
85 86 6.121776 TGTTTAGCCATCTTCTAAAGGTCA 57.878 37.500 0.00 0.00 36.88 4.02
86 87 6.173339 TGTTTAGCCATCTTCTAAAGGTCAG 58.827 40.000 0.00 0.00 36.88 3.51
87 88 6.013725 TGTTTAGCCATCTTCTAAAGGTCAGA 60.014 38.462 0.00 0.00 36.88 3.27
88 89 4.751767 AGCCATCTTCTAAAGGTCAGAG 57.248 45.455 0.00 0.00 0.00 3.35
89 90 3.118445 AGCCATCTTCTAAAGGTCAGAGC 60.118 47.826 0.00 0.00 0.00 4.09
90 91 3.369892 GCCATCTTCTAAAGGTCAGAGCA 60.370 47.826 1.66 0.00 0.00 4.26
91 92 4.685575 GCCATCTTCTAAAGGTCAGAGCAT 60.686 45.833 1.66 0.00 0.00 3.79
92 93 5.453903 GCCATCTTCTAAAGGTCAGAGCATA 60.454 44.000 1.66 0.00 0.00 3.14
93 94 6.743773 GCCATCTTCTAAAGGTCAGAGCATAT 60.744 42.308 1.66 0.00 0.00 1.78
94 95 6.873076 CCATCTTCTAAAGGTCAGAGCATATC 59.127 42.308 1.66 0.00 0.00 1.63
95 96 6.412362 TCTTCTAAAGGTCAGAGCATATCC 57.588 41.667 1.66 0.00 0.00 2.59
96 97 5.899547 TCTTCTAAAGGTCAGAGCATATCCA 59.100 40.000 1.66 0.00 0.00 3.41
97 98 5.798125 TCTAAAGGTCAGAGCATATCCAG 57.202 43.478 1.66 0.00 0.00 3.86
98 99 2.926778 AAGGTCAGAGCATATCCAGC 57.073 50.000 1.66 0.00 0.00 4.85
99 100 1.798626 AGGTCAGAGCATATCCAGCA 58.201 50.000 1.66 0.00 0.00 4.41
100 101 2.336891 AGGTCAGAGCATATCCAGCAT 58.663 47.619 1.66 0.00 0.00 3.79
101 102 2.302445 AGGTCAGAGCATATCCAGCATC 59.698 50.000 1.66 0.00 0.00 3.91
102 103 2.038164 GGTCAGAGCATATCCAGCATCA 59.962 50.000 0.00 0.00 0.00 3.07
103 104 3.327626 GTCAGAGCATATCCAGCATCAG 58.672 50.000 0.00 0.00 0.00 2.90
104 105 2.077627 CAGAGCATATCCAGCATCAGC 58.922 52.381 0.00 0.00 42.56 4.26
105 106 1.003349 AGAGCATATCCAGCATCAGCC 59.997 52.381 0.00 0.00 43.56 4.85
106 107 0.769247 AGCATATCCAGCATCAGCCA 59.231 50.000 0.00 0.00 43.56 4.75
107 108 1.354705 AGCATATCCAGCATCAGCCAT 59.645 47.619 0.00 0.00 43.56 4.40
108 109 2.168496 GCATATCCAGCATCAGCCATT 58.832 47.619 0.00 0.00 43.56 3.16
109 110 2.561419 GCATATCCAGCATCAGCCATTT 59.439 45.455 0.00 0.00 43.56 2.32
110 111 3.614150 GCATATCCAGCATCAGCCATTTG 60.614 47.826 0.00 0.00 43.56 2.32
111 112 2.447408 ATCCAGCATCAGCCATTTGA 57.553 45.000 0.00 0.00 43.56 2.69
112 113 1.466856 TCCAGCATCAGCCATTTGAC 58.533 50.000 0.00 0.00 43.56 3.18
144 145 3.616821 TCTCTGTTTCGTTCCATATTGCG 59.383 43.478 0.00 0.00 0.00 4.85
163 164 2.801342 GCGTAGAGCTCAGGGAAGATTG 60.801 54.545 17.77 0.00 44.04 2.67
164 165 2.428890 CGTAGAGCTCAGGGAAGATTGT 59.571 50.000 17.77 0.00 0.00 2.71
166 167 4.098044 CGTAGAGCTCAGGGAAGATTGTTA 59.902 45.833 17.77 0.00 0.00 2.41
167 168 5.221342 CGTAGAGCTCAGGGAAGATTGTTAT 60.221 44.000 17.77 0.00 0.00 1.89
168 169 6.016192 CGTAGAGCTCAGGGAAGATTGTTATA 60.016 42.308 17.77 0.00 0.00 0.98
218 219 6.702723 TCATTCCAAAATTCAGTTTGCTCAAG 59.297 34.615 0.00 0.00 37.20 3.02
219 220 4.370917 TCCAAAATTCAGTTTGCTCAAGC 58.629 39.130 0.00 0.00 37.20 4.01
220 221 4.099881 TCCAAAATTCAGTTTGCTCAAGCT 59.900 37.500 3.32 0.00 42.66 3.74
221 222 4.446719 CCAAAATTCAGTTTGCTCAAGCTC 59.553 41.667 3.32 0.00 42.66 4.09
222 223 4.924305 AAATTCAGTTTGCTCAAGCTCA 57.076 36.364 3.32 0.00 42.66 4.26
223 224 4.924305 AATTCAGTTTGCTCAAGCTCAA 57.076 36.364 3.32 0.00 42.66 3.02
253 256 2.937591 TGTCTCCGATGTTACACGTTC 58.062 47.619 0.00 0.00 0.00 3.95
254 257 1.909532 GTCTCCGATGTTACACGTTCG 59.090 52.381 0.46 0.46 0.00 3.95
255 258 1.805943 TCTCCGATGTTACACGTTCGA 59.194 47.619 8.21 0.00 30.90 3.71
300 304 5.875359 CCAAGGAAGTTTGATGTACTACTCC 59.125 44.000 0.00 0.00 0.00 3.85
342 773 6.991485 AAACGTTTCAAATAGCTGACATTG 57.009 33.333 7.96 0.00 0.00 2.82
345 776 6.913170 ACGTTTCAAATAGCTGACATTGAAT 58.087 32.000 14.57 3.20 40.36 2.57
346 777 7.370383 ACGTTTCAAATAGCTGACATTGAATT 58.630 30.769 14.57 0.00 40.36 2.17
347 778 7.326789 ACGTTTCAAATAGCTGACATTGAATTG 59.673 33.333 14.57 12.80 40.36 2.32
349 780 8.981647 GTTTCAAATAGCTGACATTGAATTGTT 58.018 29.630 14.57 0.00 40.36 2.83
350 781 9.545105 TTTCAAATAGCTGACATTGAATTGTTT 57.455 25.926 14.57 0.00 40.36 2.83
352 783 8.980610 TCAAATAGCTGACATTGAATTGTTTTG 58.019 29.630 0.00 0.00 0.00 2.44
353 784 8.980610 CAAATAGCTGACATTGAATTGTTTTGA 58.019 29.630 0.00 0.00 28.39 2.69
354 785 8.752766 AATAGCTGACATTGAATTGTTTTGAG 57.247 30.769 0.00 0.00 0.00 3.02
357 1926 4.930963 TGACATTGAATTGTTTTGAGCGT 58.069 34.783 0.00 0.00 0.00 5.07
361 1930 5.231991 ACATTGAATTGTTTTGAGCGTTGTC 59.768 36.000 0.00 0.00 0.00 3.18
364 1933 4.095632 TGAATTGTTTTGAGCGTTGTCTGA 59.904 37.500 0.00 0.00 0.00 3.27
376 1945 6.310467 TGAGCGTTGTCTGAAATATCTACAAC 59.690 38.462 0.00 0.00 42.87 3.32
383 1952 9.917129 TTGTCTGAAATATCTACAACGTCTTAA 57.083 29.630 0.00 0.00 31.54 1.85
422 1991 6.462552 GAGTAGTAATTTTACTCCCTCCGT 57.537 41.667 14.40 0.00 42.66 4.69
423 1992 6.864151 AGTAGTAATTTTACTCCCTCCGTT 57.136 37.500 6.26 0.00 42.66 4.44
424 1993 6.871844 AGTAGTAATTTTACTCCCTCCGTTC 58.128 40.000 6.26 0.00 42.66 3.95
425 1994 5.095145 AGTAATTTTACTCCCTCCGTTCC 57.905 43.478 0.00 0.00 39.72 3.62
426 1995 4.781621 AGTAATTTTACTCCCTCCGTTCCT 59.218 41.667 0.00 0.00 39.72 3.36
427 1996 5.960202 AGTAATTTTACTCCCTCCGTTCCTA 59.040 40.000 0.00 0.00 39.72 2.94
428 1997 5.767277 AATTTTACTCCCTCCGTTCCTAA 57.233 39.130 0.00 0.00 0.00 2.69
429 1998 5.970501 ATTTTACTCCCTCCGTTCCTAAT 57.029 39.130 0.00 0.00 0.00 1.73
430 1999 5.767277 TTTTACTCCCTCCGTTCCTAATT 57.233 39.130 0.00 0.00 0.00 1.40
431 2000 6.872585 TTTTACTCCCTCCGTTCCTAATTA 57.127 37.500 0.00 0.00 0.00 1.40
432 2001 7.441903 TTTTACTCCCTCCGTTCCTAATTAT 57.558 36.000 0.00 0.00 0.00 1.28
433 2002 8.551682 TTTTACTCCCTCCGTTCCTAATTATA 57.448 34.615 0.00 0.00 0.00 0.98
434 2003 8.551682 TTTACTCCCTCCGTTCCTAATTATAA 57.448 34.615 0.00 0.00 0.00 0.98
435 2004 6.667558 ACTCCCTCCGTTCCTAATTATAAG 57.332 41.667 0.00 0.00 0.00 1.73
436 2005 5.543020 ACTCCCTCCGTTCCTAATTATAAGG 59.457 44.000 0.00 0.00 35.26 2.69
437 2006 5.470501 TCCCTCCGTTCCTAATTATAAGGT 58.529 41.667 0.00 0.00 35.48 3.50
438 2007 5.907079 TCCCTCCGTTCCTAATTATAAGGTT 59.093 40.000 0.00 0.00 35.48 3.50
439 2008 6.387807 TCCCTCCGTTCCTAATTATAAGGTTT 59.612 38.462 0.00 0.00 35.48 3.27
440 2009 7.058525 CCCTCCGTTCCTAATTATAAGGTTTT 58.941 38.462 0.00 0.00 35.48 2.43
441 2010 7.558807 CCCTCCGTTCCTAATTATAAGGTTTTT 59.441 37.037 0.00 0.00 35.48 1.94
475 2044 8.795842 TTAAATGGATTACAAGATACGGTTGT 57.204 30.769 0.00 0.00 41.11 3.32
476 2045 9.887629 TTAAATGGATTACAAGATACGGTTGTA 57.112 29.630 0.00 0.00 38.98 2.41
477 2046 8.974060 AAATGGATTACAAGATACGGTTGTAT 57.026 30.769 0.00 0.00 43.97 2.29
478 2047 7.962964 ATGGATTACAAGATACGGTTGTATG 57.037 36.000 0.00 0.00 41.37 2.39
479 2048 6.880484 TGGATTACAAGATACGGTTGTATGT 58.120 36.000 0.00 0.00 41.37 2.29
480 2049 8.009622 TGGATTACAAGATACGGTTGTATGTA 57.990 34.615 0.00 0.00 41.37 2.29
481 2050 8.139350 TGGATTACAAGATACGGTTGTATGTAG 58.861 37.037 0.00 0.00 41.37 2.74
482 2051 8.355169 GGATTACAAGATACGGTTGTATGTAGA 58.645 37.037 0.00 0.00 41.37 2.59
483 2052 9.178427 GATTACAAGATACGGTTGTATGTAGAC 57.822 37.037 0.00 0.00 41.37 2.59
484 2053 6.519679 ACAAGATACGGTTGTATGTAGACA 57.480 37.500 0.00 0.00 41.37 3.41
485 2054 7.108841 ACAAGATACGGTTGTATGTAGACAT 57.891 36.000 0.08 0.08 41.37 3.06
486 2055 8.229253 ACAAGATACGGTTGTATGTAGACATA 57.771 34.615 0.00 0.00 41.37 2.29
487 2056 8.857098 ACAAGATACGGTTGTATGTAGACATAT 58.143 33.333 5.69 0.00 41.37 1.78
488 2057 9.692749 CAAGATACGGTTGTATGTAGACATATT 57.307 33.333 5.69 0.00 41.37 1.28
492 2061 7.548196 ACGGTTGTATGTAGACATATTTTGG 57.452 36.000 5.69 0.21 40.53 3.28
493 2062 7.332557 ACGGTTGTATGTAGACATATTTTGGA 58.667 34.615 5.69 0.00 40.53 3.53
494 2063 7.494625 ACGGTTGTATGTAGACATATTTTGGAG 59.505 37.037 5.69 0.00 40.53 3.86
495 2064 7.494625 CGGTTGTATGTAGACATATTTTGGAGT 59.505 37.037 5.69 0.00 40.53 3.85
496 2065 8.612619 GGTTGTATGTAGACATATTTTGGAGTG 58.387 37.037 5.69 0.00 40.53 3.51
497 2066 9.162764 GTTGTATGTAGACATATTTTGGAGTGT 57.837 33.333 5.69 0.00 40.53 3.55
503 2072 9.817809 TGTAGACATATTTTGGAGTGTAGATTC 57.182 33.333 0.00 0.00 0.00 2.52
504 2073 9.817809 GTAGACATATTTTGGAGTGTAGATTCA 57.182 33.333 0.00 0.00 0.00 2.57
505 2074 8.723942 AGACATATTTTGGAGTGTAGATTCAC 57.276 34.615 0.00 0.00 38.46 3.18
516 2085 6.734104 AGTGTAGATTCACTCAATTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
517 2086 5.645497 AGTGTAGATTCACTCAATTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
518 2087 5.645497 GTGTAGATTCACTCAATTTGCTCCT 59.355 40.000 0.00 0.00 35.68 3.69
519 2088 6.150140 GTGTAGATTCACTCAATTTGCTCCTT 59.850 38.462 0.00 0.00 35.68 3.36
520 2089 7.334421 GTGTAGATTCACTCAATTTGCTCCTTA 59.666 37.037 0.00 0.00 35.68 2.69
521 2090 7.882791 TGTAGATTCACTCAATTTGCTCCTTAA 59.117 33.333 0.00 0.00 0.00 1.85
522 2091 7.150783 AGATTCACTCAATTTGCTCCTTAAC 57.849 36.000 0.00 0.00 0.00 2.01
523 2092 6.944862 AGATTCACTCAATTTGCTCCTTAACT 59.055 34.615 0.00 0.00 0.00 2.24
524 2093 8.103305 AGATTCACTCAATTTGCTCCTTAACTA 58.897 33.333 0.00 0.00 0.00 2.24
525 2094 7.672983 TTCACTCAATTTGCTCCTTAACTAG 57.327 36.000 0.00 0.00 0.00 2.57
526 2095 6.769512 TCACTCAATTTGCTCCTTAACTAGT 58.230 36.000 0.00 0.00 0.00 2.57
527 2096 6.874134 TCACTCAATTTGCTCCTTAACTAGTC 59.126 38.462 0.00 0.00 0.00 2.59
528 2097 6.650807 CACTCAATTTGCTCCTTAACTAGTCA 59.349 38.462 0.00 0.00 0.00 3.41
529 2098 7.335422 CACTCAATTTGCTCCTTAACTAGTCAT 59.665 37.037 0.00 0.00 0.00 3.06
530 2099 7.885399 ACTCAATTTGCTCCTTAACTAGTCATT 59.115 33.333 0.00 0.00 0.00 2.57
531 2100 8.635765 TCAATTTGCTCCTTAACTAGTCATTT 57.364 30.769 0.00 0.00 0.00 2.32
532 2101 8.514594 TCAATTTGCTCCTTAACTAGTCATTTG 58.485 33.333 0.00 0.00 0.00 2.32
533 2102 8.299570 CAATTTGCTCCTTAACTAGTCATTTGT 58.700 33.333 0.00 0.00 0.00 2.83
534 2103 7.817418 TTTGCTCCTTAACTAGTCATTTGTT 57.183 32.000 0.00 0.00 0.00 2.83
535 2104 6.801539 TGCTCCTTAACTAGTCATTTGTTG 57.198 37.500 0.00 0.00 0.00 3.33
536 2105 5.705441 TGCTCCTTAACTAGTCATTTGTTGG 59.295 40.000 0.00 0.00 0.00 3.77
537 2106 5.938125 GCTCCTTAACTAGTCATTTGTTGGA 59.062 40.000 0.00 0.00 0.00 3.53
538 2107 6.430000 GCTCCTTAACTAGTCATTTGTTGGAA 59.570 38.462 0.00 0.00 0.00 3.53
539 2108 7.121315 GCTCCTTAACTAGTCATTTGTTGGAAT 59.879 37.037 0.00 0.00 0.00 3.01
540 2109 8.561738 TCCTTAACTAGTCATTTGTTGGAATC 57.438 34.615 0.00 0.00 0.00 2.52
541 2110 8.383175 TCCTTAACTAGTCATTTGTTGGAATCT 58.617 33.333 0.00 0.00 0.00 2.40
542 2111 9.014297 CCTTAACTAGTCATTTGTTGGAATCTT 57.986 33.333 0.00 0.00 0.00 2.40
546 2115 9.793259 AACTAGTCATTTGTTGGAATCTTTAGA 57.207 29.630 0.00 0.00 0.00 2.10
547 2116 9.793259 ACTAGTCATTTGTTGGAATCTTTAGAA 57.207 29.630 0.00 0.00 0.00 2.10
551 2120 9.399403 GTCATTTGTTGGAATCTTTAGAAAGAC 57.601 33.333 6.85 0.00 46.80 3.01
552 2121 8.576442 TCATTTGTTGGAATCTTTAGAAAGACC 58.424 33.333 6.85 5.91 46.80 3.85
553 2122 8.579863 CATTTGTTGGAATCTTTAGAAAGACCT 58.420 33.333 6.85 0.00 46.80 3.85
554 2123 9.807921 ATTTGTTGGAATCTTTAGAAAGACCTA 57.192 29.630 6.85 0.34 46.80 3.08
555 2124 9.807921 TTTGTTGGAATCTTTAGAAAGACCTAT 57.192 29.630 6.85 0.00 46.80 2.57
557 2126 9.886132 TGTTGGAATCTTTAGAAAGACCTATAC 57.114 33.333 6.85 4.72 46.80 1.47
560 2129 8.925338 TGGAATCTTTAGAAAGACCTATACTCC 58.075 37.037 6.85 5.88 46.80 3.85
561 2130 8.369424 GGAATCTTTAGAAAGACCTATACTCCC 58.631 40.741 6.85 0.00 46.80 4.30
562 2131 9.150028 GAATCTTTAGAAAGACCTATACTCCCT 57.850 37.037 6.85 0.00 46.80 4.20
563 2132 8.715190 ATCTTTAGAAAGACCTATACTCCCTC 57.285 38.462 6.85 0.00 46.80 4.30
564 2133 7.068061 TCTTTAGAAAGACCTATACTCCCTCC 58.932 42.308 0.46 0.00 39.95 4.30
565 2134 3.834938 AGAAAGACCTATACTCCCTCCG 58.165 50.000 0.00 0.00 0.00 4.63
566 2135 3.204831 AGAAAGACCTATACTCCCTCCGT 59.795 47.826 0.00 0.00 0.00 4.69
567 2136 3.684408 AAGACCTATACTCCCTCCGTT 57.316 47.619 0.00 0.00 0.00 4.44
568 2137 3.226682 AGACCTATACTCCCTCCGTTC 57.773 52.381 0.00 0.00 0.00 3.95
569 2138 2.158490 AGACCTATACTCCCTCCGTTCC 60.158 54.545 0.00 0.00 0.00 3.62
570 2139 1.133231 ACCTATACTCCCTCCGTTCCC 60.133 57.143 0.00 0.00 0.00 3.97
571 2140 1.133262 CCTATACTCCCTCCGTTCCCA 60.133 57.143 0.00 0.00 0.00 4.37
572 2141 2.674420 CTATACTCCCTCCGTTCCCAA 58.326 52.381 0.00 0.00 0.00 4.12
573 2142 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
574 2143 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
575 2144 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
576 2145 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
577 2146 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
578 2147 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
579 2148 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
580 2149 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
581 2150 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
582 2151 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
583 2152 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
584 2153 5.185056 CCTCCGTTCCCAAATATTTGTCTTT 59.815 40.000 23.24 0.00 36.45 2.52
585 2154 6.262193 TCCGTTCCCAAATATTTGTCTTTC 57.738 37.500 23.24 10.84 36.45 2.62
586 2155 6.007703 TCCGTTCCCAAATATTTGTCTTTCT 58.992 36.000 23.24 0.00 36.45 2.52
587 2156 7.169591 TCCGTTCCCAAATATTTGTCTTTCTA 58.830 34.615 23.24 5.03 36.45 2.10
588 2157 7.335924 TCCGTTCCCAAATATTTGTCTTTCTAG 59.664 37.037 23.24 8.23 36.45 2.43
589 2158 7.335924 CCGTTCCCAAATATTTGTCTTTCTAGA 59.664 37.037 23.24 7.17 36.45 2.43
614 2183 9.445786 GACATTTTAAATGGACATAACATACGG 57.554 33.333 20.00 0.00 0.00 4.02
615 2184 9.179909 ACATTTTAAATGGACATAACATACGGA 57.820 29.630 20.00 0.00 0.00 4.69
619 2188 9.833917 TTTAAATGGACATAACATACGGATGTA 57.166 29.630 15.10 3.00 45.93 2.29
661 2230 9.530129 GAGTGTAGATTCACTTATTTTGTTTCG 57.470 33.333 0.98 0.00 46.81 3.46
662 2231 9.052759 AGTGTAGATTCACTTATTTTGTTTCGT 57.947 29.630 0.00 0.00 44.92 3.85
677 2246 9.959749 ATTTTGTTTCGTATGTAATCACTTGTT 57.040 25.926 0.00 0.00 0.00 2.83
678 2247 8.775220 TTTGTTTCGTATGTAATCACTTGTTG 57.225 30.769 0.00 0.00 0.00 3.33
679 2248 7.716768 TGTTTCGTATGTAATCACTTGTTGA 57.283 32.000 0.00 0.00 39.11 3.18
680 2249 8.144155 TGTTTCGTATGTAATCACTTGTTGAA 57.856 30.769 0.00 0.00 37.92 2.69
681 2250 8.613482 TGTTTCGTATGTAATCACTTGTTGAAA 58.387 29.630 0.00 0.00 37.92 2.69
682 2251 9.607285 GTTTCGTATGTAATCACTTGTTGAAAT 57.393 29.630 0.00 0.00 37.92 2.17
683 2252 9.820229 TTTCGTATGTAATCACTTGTTGAAATC 57.180 29.630 0.00 0.00 37.92 2.17
684 2253 8.771920 TCGTATGTAATCACTTGTTGAAATCT 57.228 30.769 0.00 0.00 37.92 2.40
685 2254 8.869897 TCGTATGTAATCACTTGTTGAAATCTC 58.130 33.333 0.00 0.00 37.92 2.75
686 2255 8.873830 CGTATGTAATCACTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 37.92 3.10
690 2259 9.996554 TGTAATCACTTGTTGAAATCTCTAGAA 57.003 29.630 0.00 0.00 37.92 2.10
693 2262 9.784531 AATCACTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 37.92 2.52
694 2263 9.956640 ATCACTTGTTGAAATCTCTAGAAAGAT 57.043 29.630 0.00 0.00 37.92 2.40
710 2279 9.555727 TCTAGAAAGATAAATATTTGGGAACGG 57.444 33.333 11.05 0.00 0.00 4.44
711 2280 9.555727 CTAGAAAGATAAATATTTGGGAACGGA 57.444 33.333 11.05 0.00 0.00 4.69
712 2281 8.451908 AGAAAGATAAATATTTGGGAACGGAG 57.548 34.615 11.05 0.00 0.00 4.63
713 2282 7.502561 AGAAAGATAAATATTTGGGAACGGAGG 59.497 37.037 11.05 0.00 0.00 4.30
714 2283 5.631119 AGATAAATATTTGGGAACGGAGGG 58.369 41.667 11.05 0.00 0.00 4.30
715 2284 5.371472 AGATAAATATTTGGGAACGGAGGGA 59.629 40.000 11.05 0.00 0.00 4.20
716 2285 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
717 2286 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
718 2287 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
719 2288 1.961133 TTTGGGAACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
720 2289 1.961133 TTGGGAACGGAGGGAGTATT 58.039 50.000 0.00 0.00 0.00 1.89
721 2290 1.961133 TGGGAACGGAGGGAGTATTT 58.039 50.000 0.00 0.00 0.00 1.40
722 2291 1.557832 TGGGAACGGAGGGAGTATTTG 59.442 52.381 0.00 0.00 0.00 2.32
723 2292 1.134189 GGGAACGGAGGGAGTATTTGG 60.134 57.143 0.00 0.00 0.00 3.28
724 2293 1.134189 GGAACGGAGGGAGTATTTGGG 60.134 57.143 0.00 0.00 0.00 4.12
725 2294 1.835531 GAACGGAGGGAGTATTTGGGA 59.164 52.381 0.00 0.00 0.00 4.37
726 2295 1.961133 ACGGAGGGAGTATTTGGGAA 58.039 50.000 0.00 0.00 0.00 3.97
727 2296 1.838077 ACGGAGGGAGTATTTGGGAAG 59.162 52.381 0.00 0.00 0.00 3.46
728 2297 1.141053 CGGAGGGAGTATTTGGGAAGG 59.859 57.143 0.00 0.00 0.00 3.46
729 2298 1.495148 GGAGGGAGTATTTGGGAAGGG 59.505 57.143 0.00 0.00 0.00 3.95
730 2299 1.495148 GAGGGAGTATTTGGGAAGGGG 59.505 57.143 0.00 0.00 0.00 4.79
731 2300 0.556258 GGGAGTATTTGGGAAGGGGG 59.444 60.000 0.00 0.00 0.00 5.40
793 2370 7.432252 GGTTAACAGACATGAGTGTTCTTTTTG 59.568 37.037 17.07 0.00 39.09 2.44
795 2372 5.192927 ACAGACATGAGTGTTCTTTTTGGA 58.807 37.500 0.00 0.00 39.09 3.53
796 2373 5.652014 ACAGACATGAGTGTTCTTTTTGGAA 59.348 36.000 0.00 0.00 39.09 3.53
797 2374 6.152661 ACAGACATGAGTGTTCTTTTTGGAAA 59.847 34.615 0.00 0.00 39.09 3.13
816 2393 7.222000 TGGAAAGAAAAACAACAAGTACAGT 57.778 32.000 0.00 0.00 0.00 3.55
819 2396 7.699391 GGAAAGAAAAACAACAAGTACAGTACC 59.301 37.037 7.13 0.00 0.00 3.34
827 2404 4.868314 ACAAGTACAGTACCCTTCACTC 57.132 45.455 7.13 0.00 0.00 3.51
828 2405 4.481072 ACAAGTACAGTACCCTTCACTCT 58.519 43.478 7.13 0.00 0.00 3.24
829 2406 4.900054 ACAAGTACAGTACCCTTCACTCTT 59.100 41.667 7.13 0.00 0.00 2.85
830 2407 5.365895 ACAAGTACAGTACCCTTCACTCTTT 59.634 40.000 7.13 0.00 0.00 2.52
831 2408 6.126854 ACAAGTACAGTACCCTTCACTCTTTT 60.127 38.462 7.13 0.00 0.00 2.27
832 2409 6.099159 AGTACAGTACCCTTCACTCTTTTC 57.901 41.667 7.13 0.00 0.00 2.29
833 2410 5.839606 AGTACAGTACCCTTCACTCTTTTCT 59.160 40.000 7.13 0.00 0.00 2.52
834 2411 5.632034 ACAGTACCCTTCACTCTTTTCTT 57.368 39.130 0.00 0.00 0.00 2.52
835 2412 6.002653 ACAGTACCCTTCACTCTTTTCTTT 57.997 37.500 0.00 0.00 0.00 2.52
836 2413 6.424032 ACAGTACCCTTCACTCTTTTCTTTT 58.576 36.000 0.00 0.00 0.00 2.27
837 2414 6.542735 ACAGTACCCTTCACTCTTTTCTTTTC 59.457 38.462 0.00 0.00 0.00 2.29
838 2415 6.768381 CAGTACCCTTCACTCTTTTCTTTTCT 59.232 38.462 0.00 0.00 0.00 2.52
839 2416 7.283354 CAGTACCCTTCACTCTTTTCTTTTCTT 59.717 37.037 0.00 0.00 0.00 2.52
840 2417 7.834681 AGTACCCTTCACTCTTTTCTTTTCTTT 59.165 33.333 0.00 0.00 0.00 2.52
841 2418 7.482169 ACCCTTCACTCTTTTCTTTTCTTTT 57.518 32.000 0.00 0.00 0.00 2.27
842 2419 7.907389 ACCCTTCACTCTTTTCTTTTCTTTTT 58.093 30.769 0.00 0.00 0.00 1.94
886 2464 7.050970 TCTTAACTCAACTTTGCTACAGAGA 57.949 36.000 0.00 0.00 0.00 3.10
912 2490 3.939592 GGGGAATTTCAGCTGTAGTACAC 59.060 47.826 14.67 0.39 0.00 2.90
917 2495 3.610040 TTCAGCTGTAGTACACCCATG 57.390 47.619 14.67 0.00 0.00 3.66
947 2525 2.325583 TGGAGCGAACAGAACAGTTT 57.674 45.000 0.00 0.00 0.00 2.66
1005 2583 2.491621 CGCAGCCAGACGATGAGA 59.508 61.111 0.00 0.00 0.00 3.27
1006 2584 1.875813 CGCAGCCAGACGATGAGAC 60.876 63.158 0.00 0.00 0.00 3.36
1007 2585 1.875813 GCAGCCAGACGATGAGACG 60.876 63.158 0.00 0.00 39.31 4.18
1008 2586 1.803289 CAGCCAGACGATGAGACGA 59.197 57.895 0.00 0.00 37.03 4.20
1009 2587 0.248417 CAGCCAGACGATGAGACGAG 60.248 60.000 0.00 0.00 37.03 4.18
1010 2588 1.064946 GCCAGACGATGAGACGAGG 59.935 63.158 0.00 0.00 37.03 4.63
1011 2589 1.064946 CCAGACGATGAGACGAGGC 59.935 63.158 0.00 0.00 37.03 4.70
1012 2590 1.064946 CAGACGATGAGACGAGGCC 59.935 63.158 0.00 0.00 37.03 5.19
1013 2591 2.122167 AGACGATGAGACGAGGCCC 61.122 63.158 0.00 0.00 37.03 5.80
1014 2592 3.471244 GACGATGAGACGAGGCCCG 62.471 68.421 11.48 11.48 45.44 6.13
1015 2593 4.933064 CGATGAGACGAGGCCCGC 62.933 72.222 12.78 6.71 43.32 6.13
1016 2594 4.593864 GATGAGACGAGGCCCGCC 62.594 72.222 12.78 0.00 43.32 6.13
1267 2851 1.306141 TTCATCACCTCGGCCTCCT 60.306 57.895 0.00 0.00 0.00 3.69
1414 2998 0.734253 CTTCGTCCTCAAGTCCTGCG 60.734 60.000 0.00 0.00 0.00 5.18
1416 3000 2.659610 GTCCTCAAGTCCTGCGCT 59.340 61.111 9.73 0.00 0.00 5.92
1566 3168 2.639286 GCGTGCAGGGTGTTTGAG 59.361 61.111 8.72 0.00 0.00 3.02
1577 3179 2.235891 GGTGTTTGAGGAAATTCCGGT 58.764 47.619 6.35 0.00 42.75 5.28
1638 3240 4.038271 TCTCAAAGCCAGTGATTTGGAT 57.962 40.909 16.17 0.00 45.58 3.41
1647 3249 2.828549 GATTTGGATGCCGCCCGT 60.829 61.111 0.00 0.00 0.00 5.28
1648 3250 3.124798 GATTTGGATGCCGCCCGTG 62.125 63.158 0.00 0.00 0.00 4.94
1696 3298 0.878523 TGTCGTTTCTTGGACTGCGG 60.879 55.000 0.00 0.00 34.31 5.69
1794 3396 2.223829 CGAGGTGACCATGGTGAGTATC 60.224 54.545 25.52 11.02 0.00 2.24
1800 3402 2.427453 GACCATGGTGAGTATCGTGTCT 59.573 50.000 25.52 0.00 38.61 3.41
1839 3441 3.741476 CTTGCAACTGGGGAGCGC 61.741 66.667 0.00 0.00 0.00 5.92
1889 3491 1.984424 TGGATGGATGGTGTCACTTCA 59.016 47.619 2.35 0.00 0.00 3.02
1893 3495 2.571212 TGGATGGTGTCACTTCACAAC 58.429 47.619 2.35 0.00 39.76 3.32
2050 3652 3.928992 CACGATTGCTGTGTTCTATCAGT 59.071 43.478 0.00 0.00 34.57 3.41
2079 3681 1.352622 AAGGGAACACTGTGAGGCCA 61.353 55.000 15.86 0.00 0.00 5.36
2106 3708 1.224069 TGACGCTTCTTGCAGTGCTC 61.224 55.000 17.60 3.14 43.06 4.26
2116 3718 1.741401 GCAGTGCTCATGGCGTACA 60.741 57.895 8.18 0.00 45.43 2.90
2118 3720 1.446099 AGTGCTCATGGCGTACACG 60.446 57.895 0.00 0.00 45.43 4.49
2166 3768 1.835121 CCATGTTCAATGCGATGCAG 58.165 50.000 0.00 0.00 43.65 4.41
2177 3779 2.510238 GATGCAGCGAGGCGACTT 60.510 61.111 0.00 0.00 44.43 3.01
2309 3911 2.202236 AATGCTGTGATCTGGGGCGT 62.202 55.000 0.00 0.00 0.00 5.68
2394 3996 2.999928 AGGAACCTAAACCCAGAGGAA 58.000 47.619 0.00 0.00 36.61 3.36
2457 4059 2.028190 CGGATAGCAGAGGCCACG 59.972 66.667 5.01 0.00 42.56 4.94
2510 4112 0.173708 CAGAAGACTACAGGCCGGAC 59.826 60.000 10.86 0.00 0.00 4.79
2541 4143 3.165875 TCTGCCTCAGCTGTAGTTTACT 58.834 45.455 14.67 0.00 40.80 2.24
2542 4144 3.578716 TCTGCCTCAGCTGTAGTTTACTT 59.421 43.478 14.67 0.00 40.80 2.24
2543 4145 4.770531 TCTGCCTCAGCTGTAGTTTACTTA 59.229 41.667 14.67 0.00 40.80 2.24
2544 4146 4.817517 TGCCTCAGCTGTAGTTTACTTAC 58.182 43.478 14.67 0.00 40.80 2.34
2545 4147 4.182339 GCCTCAGCTGTAGTTTACTTACC 58.818 47.826 14.67 0.00 35.50 2.85
2546 4148 4.421948 CCTCAGCTGTAGTTTACTTACCG 58.578 47.826 14.67 0.00 0.00 4.02
2547 4149 4.082354 CCTCAGCTGTAGTTTACTTACCGT 60.082 45.833 14.67 0.00 0.00 4.83
2548 4150 5.051891 TCAGCTGTAGTTTACTTACCGTC 57.948 43.478 14.67 0.00 0.00 4.79
2549 4151 4.520111 TCAGCTGTAGTTTACTTACCGTCA 59.480 41.667 14.67 0.00 0.00 4.35
2550 4152 5.184479 TCAGCTGTAGTTTACTTACCGTCAT 59.816 40.000 14.67 0.00 0.00 3.06
2562 4164 2.622064 ACCGTCATTGGCTATCCTTC 57.378 50.000 0.00 0.00 0.00 3.46
2584 4186 3.857665 CAGATCACAATTCACAAGCATGC 59.142 43.478 10.51 10.51 0.00 4.06
2602 4210 1.533219 CCATGCCAGCCAGATGGTA 59.467 57.895 3.55 0.00 42.75 3.25
2633 4241 7.418827 CCAATCTATCTTCTCTTCACACCAGAT 60.419 40.741 0.00 0.00 0.00 2.90
2638 4246 4.528206 TCTTCTCTTCACACCAGATAAGCA 59.472 41.667 0.00 0.00 28.95 3.91
2647 4255 7.315066 TCACACCAGATAAGCATATGGATTA 57.685 36.000 4.56 0.00 44.93 1.75
2661 4269 7.776969 AGCATATGGATTAGTCACATTTGTCTT 59.223 33.333 4.56 0.00 0.00 3.01
2668 4276 9.871238 GGATTAGTCACATTTGTCTTAGTCTTA 57.129 33.333 0.00 0.00 0.00 2.10
2694 4302 6.251255 TCCAAGGTGTGATGATTGATATCA 57.749 37.500 0.00 0.00 44.52 2.15
2709 4317 5.372343 TGATATCAATGGTGTAAGGCTGT 57.628 39.130 1.98 0.00 0.00 4.40
2710 4318 5.368145 TGATATCAATGGTGTAAGGCTGTC 58.632 41.667 1.98 0.00 0.00 3.51
2722 4330 1.003718 GGCTGTCGGCAACTAAGGT 60.004 57.895 5.89 0.00 44.01 3.50
2830 4442 7.641411 CAGTTTCAGTATGTATGCATGTTAAGC 59.359 37.037 10.16 0.00 37.40 3.09
2840 4452 2.301346 GCATGTTAAGCATAGCCCAGT 58.699 47.619 0.00 0.00 35.74 4.00
2841 4453 2.689983 GCATGTTAAGCATAGCCCAGTT 59.310 45.455 0.00 0.00 35.74 3.16
2842 4454 3.131046 GCATGTTAAGCATAGCCCAGTTT 59.869 43.478 0.00 0.00 35.74 2.66
2843 4455 4.338118 GCATGTTAAGCATAGCCCAGTTTA 59.662 41.667 0.00 0.00 35.74 2.01
2844 4456 5.506317 GCATGTTAAGCATAGCCCAGTTTAG 60.506 44.000 0.00 0.00 35.74 1.85
2845 4457 3.945285 TGTTAAGCATAGCCCAGTTTAGC 59.055 43.478 0.00 0.00 0.00 3.09
2846 4458 4.200092 GTTAAGCATAGCCCAGTTTAGCT 58.800 43.478 0.00 0.00 43.20 3.32
2847 4459 2.338577 AGCATAGCCCAGTTTAGCTG 57.661 50.000 0.00 0.00 44.63 4.24
2862 4474 8.177663 CCAGTTTAGCTGTCACTTACATTATTG 58.822 37.037 0.00 0.00 43.55 1.90
2922 4534 2.723124 AAAAGTGGCATTTGCGGTAG 57.277 45.000 0.00 0.00 43.26 3.18
2923 4535 0.887933 AAAGTGGCATTTGCGGTAGG 59.112 50.000 0.00 0.00 43.26 3.18
2924 4536 1.595093 AAGTGGCATTTGCGGTAGGC 61.595 55.000 0.00 0.00 43.26 3.93
2925 4537 2.753849 TGGCATTTGCGGTAGGCC 60.754 61.111 0.00 0.00 44.82 5.19
2926 4538 2.440247 GGCATTTGCGGTAGGCCT 60.440 61.111 11.78 11.78 43.26 5.19
2927 4539 2.774799 GGCATTTGCGGTAGGCCTG 61.775 63.158 17.99 0.00 43.26 4.85
2928 4540 1.748879 GCATTTGCGGTAGGCCTGA 60.749 57.895 17.99 0.00 42.61 3.86
2929 4541 1.312371 GCATTTGCGGTAGGCCTGAA 61.312 55.000 17.99 0.00 42.61 3.02
2950 4577 6.587273 TGAATTTTAAAACCAACCCCTTCAG 58.413 36.000 1.97 0.00 0.00 3.02
2957 4584 1.992557 ACCAACCCCTTCAGCATCTTA 59.007 47.619 0.00 0.00 0.00 2.10
2989 4616 2.040278 ACCAGGTGCACACAGTCATTAT 59.960 45.455 20.43 0.00 0.00 1.28
2990 4617 3.263170 ACCAGGTGCACACAGTCATTATA 59.737 43.478 20.43 0.00 0.00 0.98
2991 4618 4.080356 ACCAGGTGCACACAGTCATTATAT 60.080 41.667 20.43 0.00 0.00 0.86
3031 4664 3.732943 CGAGAAACAAGTGCGTATTTCC 58.267 45.455 0.00 0.00 32.56 3.13
3037 4670 3.740115 ACAAGTGCGTATTTCCAAGACT 58.260 40.909 0.00 0.00 0.00 3.24
3038 4671 3.498397 ACAAGTGCGTATTTCCAAGACTG 59.502 43.478 0.00 0.00 0.00 3.51
3080 4713 3.243201 GGCTCACTAATAAATGTGGCTGC 60.243 47.826 0.00 0.00 35.15 5.25
3081 4714 3.243201 GCTCACTAATAAATGTGGCTGCC 60.243 47.826 12.87 12.87 35.15 4.85
3082 4715 3.947196 CTCACTAATAAATGTGGCTGCCA 59.053 43.478 19.30 19.30 35.15 4.92
3083 4716 3.947196 TCACTAATAAATGTGGCTGCCAG 59.053 43.478 24.10 9.48 32.34 4.85
3084 4717 3.947196 CACTAATAAATGTGGCTGCCAGA 59.053 43.478 24.10 22.77 32.34 3.86
3085 4718 4.398988 CACTAATAAATGTGGCTGCCAGAA 59.601 41.667 24.10 14.30 32.34 3.02
3086 4719 3.874392 AATAAATGTGGCTGCCAGAAC 57.126 42.857 24.10 11.45 32.34 3.01
3094 4727 1.073897 GCTGCCAGAACCCAGAAGT 59.926 57.895 0.00 0.00 0.00 3.01
3104 4737 5.244626 CCAGAACCCAGAAGTTGATGAAATT 59.755 40.000 0.00 0.00 0.00 1.82
3156 4794 5.183228 GCTCCAGCCATAGTTACTTTAACA 58.817 41.667 0.00 0.00 36.75 2.41
3190 4832 9.145442 AGTAAGTACTTAAAGTTCCAGAAGTCT 57.855 33.333 16.82 2.36 34.15 3.24
3221 4863 1.410153 ACTCTTGCCTTGCTGGTTTTG 59.590 47.619 0.00 0.00 38.35 2.44
3231 4873 1.133199 TGCTGGTTTTGGAGGGATTGT 60.133 47.619 0.00 0.00 0.00 2.71
3232 4874 1.970640 GCTGGTTTTGGAGGGATTGTT 59.029 47.619 0.00 0.00 0.00 2.83
3237 4879 3.769300 GGTTTTGGAGGGATTGTTAGCAT 59.231 43.478 0.00 0.00 0.00 3.79
3238 4880 4.953579 GGTTTTGGAGGGATTGTTAGCATA 59.046 41.667 0.00 0.00 0.00 3.14
3241 4883 6.524101 TTTGGAGGGATTGTTAGCATAAAC 57.476 37.500 0.00 0.00 0.00 2.01
3307 4949 6.079763 CACACTACAATCATTTTCCGTTGAG 58.920 40.000 0.00 0.00 0.00 3.02
3408 5051 5.092554 TGAGTTGACAGTTAAAGTCCACA 57.907 39.130 12.90 4.65 34.96 4.17
3415 5058 7.164230 TGACAGTTAAAGTCCACAAAAATGT 57.836 32.000 6.80 0.00 35.15 2.71
3419 5062 7.759433 ACAGTTAAAGTCCACAAAAATGTCTTG 59.241 33.333 0.00 0.00 0.00 3.02
3420 5063 6.756542 AGTTAAAGTCCACAAAAATGTCTTGC 59.243 34.615 0.00 0.00 0.00 4.01
3424 5067 3.914364 GTCCACAAAAATGTCTTGCGATC 59.086 43.478 0.00 0.00 0.00 3.69
3437 5080 6.964908 TGTCTTGCGATCTTCATTTTAACAA 58.035 32.000 0.00 0.00 0.00 2.83
3446 5089 6.648879 TCTTCATTTTAACAAGTTCTGGGG 57.351 37.500 0.00 0.00 0.00 4.96
3474 5117 6.039047 CCCTCACAGATTCCATGTTGATTAAG 59.961 42.308 0.00 0.00 0.00 1.85
3475 5118 6.039047 CCTCACAGATTCCATGTTGATTAAGG 59.961 42.308 0.00 0.00 0.00 2.69
3476 5119 5.357878 TCACAGATTCCATGTTGATTAAGGC 59.642 40.000 0.00 0.00 0.00 4.35
3477 5120 5.359009 CACAGATTCCATGTTGATTAAGGCT 59.641 40.000 0.00 0.00 0.00 4.58
3478 5121 5.359009 ACAGATTCCATGTTGATTAAGGCTG 59.641 40.000 0.00 0.00 0.00 4.85
3479 5122 4.340381 AGATTCCATGTTGATTAAGGCTGC 59.660 41.667 0.00 0.00 0.00 5.25
3480 5123 2.016318 TCCATGTTGATTAAGGCTGCG 58.984 47.619 0.00 0.00 0.00 5.18
3481 5124 1.745087 CCATGTTGATTAAGGCTGCGT 59.255 47.619 0.00 0.00 0.00 5.24
3482 5125 2.164219 CCATGTTGATTAAGGCTGCGTT 59.836 45.455 12.54 12.54 0.00 4.84
3483 5126 3.429085 CATGTTGATTAAGGCTGCGTTC 58.571 45.455 11.22 0.00 0.00 3.95
3484 5127 1.463056 TGTTGATTAAGGCTGCGTTCG 59.537 47.619 11.22 0.00 0.00 3.95
3485 5128 1.083489 TTGATTAAGGCTGCGTTCGG 58.917 50.000 11.22 0.00 0.00 4.30
3486 5129 0.248012 TGATTAAGGCTGCGTTCGGA 59.752 50.000 11.22 0.00 0.00 4.55
3487 5130 1.338294 TGATTAAGGCTGCGTTCGGAA 60.338 47.619 11.22 1.12 0.00 4.30
3488 5131 1.940613 GATTAAGGCTGCGTTCGGAAT 59.059 47.619 11.22 6.10 0.00 3.01
3489 5132 1.365699 TTAAGGCTGCGTTCGGAATC 58.634 50.000 11.22 0.00 0.00 2.52
3490 5133 0.461339 TAAGGCTGCGTTCGGAATCC 60.461 55.000 11.22 0.00 0.00 3.01
3491 5134 3.202706 GGCTGCGTTCGGAATCCC 61.203 66.667 0.00 0.00 0.00 3.85
3492 5135 2.125106 GCTGCGTTCGGAATCCCT 60.125 61.111 0.00 0.00 0.00 4.20
3493 5136 2.174319 GCTGCGTTCGGAATCCCTC 61.174 63.158 0.00 0.00 0.00 4.30
3494 5137 1.521681 CTGCGTTCGGAATCCCTCC 60.522 63.158 0.00 0.00 41.40 4.30
3501 5144 3.568578 GGAATCCCTCCGCTCCAT 58.431 61.111 0.00 0.00 33.37 3.41
3502 5145 2.759985 GGAATCCCTCCGCTCCATA 58.240 57.895 0.00 0.00 33.37 2.74
3503 5146 1.056660 GGAATCCCTCCGCTCCATAA 58.943 55.000 0.00 0.00 33.37 1.90
3504 5147 1.270893 GGAATCCCTCCGCTCCATAAC 60.271 57.143 0.00 0.00 33.37 1.89
3505 5148 1.694696 GAATCCCTCCGCTCCATAACT 59.305 52.381 0.00 0.00 0.00 2.24
3506 5149 1.343069 ATCCCTCCGCTCCATAACTC 58.657 55.000 0.00 0.00 0.00 3.01
3507 5150 0.759436 TCCCTCCGCTCCATAACTCC 60.759 60.000 0.00 0.00 0.00 3.85
3508 5151 0.760945 CCCTCCGCTCCATAACTCCT 60.761 60.000 0.00 0.00 0.00 3.69
3509 5152 1.123928 CCTCCGCTCCATAACTCCTT 58.876 55.000 0.00 0.00 0.00 3.36
3510 5153 1.069358 CCTCCGCTCCATAACTCCTTC 59.931 57.143 0.00 0.00 0.00 3.46
3511 5154 0.744874 TCCGCTCCATAACTCCTTCG 59.255 55.000 0.00 0.00 0.00 3.79
3512 5155 0.876342 CCGCTCCATAACTCCTTCGC 60.876 60.000 0.00 0.00 0.00 4.70
3513 5156 1.209275 CGCTCCATAACTCCTTCGCG 61.209 60.000 0.00 0.00 0.00 5.87
3514 5157 0.876342 GCTCCATAACTCCTTCGCGG 60.876 60.000 6.13 0.00 0.00 6.46
3515 5158 0.744874 CTCCATAACTCCTTCGCGGA 59.255 55.000 6.13 0.00 40.30 5.54
3529 5172 2.892425 CGGAGCGGAGTGGCATTC 60.892 66.667 0.66 0.66 34.64 2.67
3530 5173 2.268920 GGAGCGGAGTGGCATTCA 59.731 61.111 12.30 0.00 34.64 2.57
3531 5174 1.817099 GGAGCGGAGTGGCATTCAG 60.817 63.158 12.30 9.01 34.64 3.02
3532 5175 1.078848 GAGCGGAGTGGCATTCAGT 60.079 57.895 12.30 0.00 34.64 3.41
3533 5176 0.175760 GAGCGGAGTGGCATTCAGTA 59.824 55.000 12.30 0.00 34.64 2.74
3534 5177 0.176680 AGCGGAGTGGCATTCAGTAG 59.823 55.000 12.30 1.62 34.64 2.57
3535 5178 0.175760 GCGGAGTGGCATTCAGTAGA 59.824 55.000 12.30 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 8.154203 TGAGAAGTTTTTCTGAAAAAGGGTTTT 58.846 29.630 24.27 14.74 43.63 2.43
9 10 7.676004 TGAGAAGTTTTTCTGAAAAAGGGTTT 58.324 30.769 24.27 16.81 43.63 3.27
10 11 7.239763 TGAGAAGTTTTTCTGAAAAAGGGTT 57.760 32.000 24.27 18.21 43.63 4.11
11 12 6.850752 TGAGAAGTTTTTCTGAAAAAGGGT 57.149 33.333 24.27 14.38 43.63 4.34
12 13 8.722480 ATTTGAGAAGTTTTTCTGAAAAAGGG 57.278 30.769 24.27 0.00 45.35 3.95
13 14 9.369904 TGATTTGAGAAGTTTTTCTGAAAAAGG 57.630 29.630 24.27 0.00 45.35 3.11
19 20 9.520204 GTTGAATGATTTGAGAAGTTTTTCTGA 57.480 29.630 0.00 0.00 43.63 3.27
20 21 9.525409 AGTTGAATGATTTGAGAAGTTTTTCTG 57.475 29.630 0.00 0.00 43.63 3.02
21 22 9.525409 CAGTTGAATGATTTGAGAAGTTTTTCT 57.475 29.630 0.00 0.00 46.22 2.52
22 23 8.271487 GCAGTTGAATGATTTGAGAAGTTTTTC 58.729 33.333 0.00 0.00 0.00 2.29
23 24 7.225341 GGCAGTTGAATGATTTGAGAAGTTTTT 59.775 33.333 0.00 0.00 0.00 1.94
24 25 6.703165 GGCAGTTGAATGATTTGAGAAGTTTT 59.297 34.615 0.00 0.00 0.00 2.43
25 26 6.041296 AGGCAGTTGAATGATTTGAGAAGTTT 59.959 34.615 0.00 0.00 0.00 2.66
26 27 5.537674 AGGCAGTTGAATGATTTGAGAAGTT 59.462 36.000 0.00 0.00 0.00 2.66
27 28 5.075493 AGGCAGTTGAATGATTTGAGAAGT 58.925 37.500 0.00 0.00 0.00 3.01
28 29 5.638783 GAGGCAGTTGAATGATTTGAGAAG 58.361 41.667 0.00 0.00 0.00 2.85
29 30 4.154737 CGAGGCAGTTGAATGATTTGAGAA 59.845 41.667 0.00 0.00 0.00 2.87
30 31 3.686241 CGAGGCAGTTGAATGATTTGAGA 59.314 43.478 0.00 0.00 0.00 3.27
31 32 3.438087 ACGAGGCAGTTGAATGATTTGAG 59.562 43.478 0.00 0.00 0.00 3.02
32 33 3.411446 ACGAGGCAGTTGAATGATTTGA 58.589 40.909 0.00 0.00 0.00 2.69
33 34 3.837213 ACGAGGCAGTTGAATGATTTG 57.163 42.857 0.00 0.00 0.00 2.32
34 35 4.201950 GCATACGAGGCAGTTGAATGATTT 60.202 41.667 0.00 0.00 0.00 2.17
35 36 3.313526 GCATACGAGGCAGTTGAATGATT 59.686 43.478 0.00 0.00 0.00 2.57
36 37 2.874701 GCATACGAGGCAGTTGAATGAT 59.125 45.455 0.00 0.00 0.00 2.45
37 38 2.279741 GCATACGAGGCAGTTGAATGA 58.720 47.619 0.00 0.00 0.00 2.57
38 39 1.331756 GGCATACGAGGCAGTTGAATG 59.668 52.381 0.00 0.00 0.00 2.67
39 40 1.668419 GGCATACGAGGCAGTTGAAT 58.332 50.000 0.00 0.00 0.00 2.57
40 41 0.392461 GGGCATACGAGGCAGTTGAA 60.392 55.000 0.00 0.00 35.46 2.69
41 42 1.220749 GGGCATACGAGGCAGTTGA 59.779 57.895 0.00 0.00 35.46 3.18
42 43 0.464373 ATGGGCATACGAGGCAGTTG 60.464 55.000 0.00 0.00 35.46 3.16
43 44 0.255890 AATGGGCATACGAGGCAGTT 59.744 50.000 0.00 0.00 35.46 3.16
44 45 0.464373 CAATGGGCATACGAGGCAGT 60.464 55.000 0.00 0.00 35.46 4.40
45 46 0.464373 ACAATGGGCATACGAGGCAG 60.464 55.000 0.00 0.00 35.46 4.85
46 47 0.034574 AACAATGGGCATACGAGGCA 60.035 50.000 0.00 0.00 35.46 4.75
47 48 1.102978 AAACAATGGGCATACGAGGC 58.897 50.000 0.00 0.00 0.00 4.70
48 49 2.290641 GCTAAACAATGGGCATACGAGG 59.709 50.000 0.00 0.00 0.00 4.63
49 50 2.290641 GGCTAAACAATGGGCATACGAG 59.709 50.000 0.00 0.00 0.00 4.18
50 51 2.294074 GGCTAAACAATGGGCATACGA 58.706 47.619 0.00 0.00 0.00 3.43
51 52 2.020720 TGGCTAAACAATGGGCATACG 58.979 47.619 0.00 0.00 0.00 3.06
52 53 3.891366 AGATGGCTAAACAATGGGCATAC 59.109 43.478 1.02 0.00 44.26 2.39
53 54 4.183223 AGATGGCTAAACAATGGGCATA 57.817 40.909 1.02 0.00 44.26 3.14
54 55 3.036452 AGATGGCTAAACAATGGGCAT 57.964 42.857 0.60 0.60 46.29 4.40
55 56 2.530460 AGATGGCTAAACAATGGGCA 57.470 45.000 0.00 0.00 39.68 5.36
56 57 3.026694 AGAAGATGGCTAAACAATGGGC 58.973 45.455 0.00 0.00 0.00 5.36
57 58 6.183360 CCTTTAGAAGATGGCTAAACAATGGG 60.183 42.308 0.00 0.00 34.92 4.00
58 59 6.378280 ACCTTTAGAAGATGGCTAAACAATGG 59.622 38.462 0.00 0.00 34.92 3.16
59 60 7.121168 TGACCTTTAGAAGATGGCTAAACAATG 59.879 37.037 0.00 0.00 34.92 2.82
60 61 7.175104 TGACCTTTAGAAGATGGCTAAACAAT 58.825 34.615 0.00 0.00 34.92 2.71
61 62 6.539173 TGACCTTTAGAAGATGGCTAAACAA 58.461 36.000 0.00 0.00 34.92 2.83
62 63 6.013725 TCTGACCTTTAGAAGATGGCTAAACA 60.014 38.462 0.00 0.00 34.92 2.83
63 64 6.407202 TCTGACCTTTAGAAGATGGCTAAAC 58.593 40.000 0.00 0.00 34.92 2.01
64 65 6.620877 TCTGACCTTTAGAAGATGGCTAAA 57.379 37.500 0.00 0.00 36.64 1.85
65 66 5.395768 GCTCTGACCTTTAGAAGATGGCTAA 60.396 44.000 0.00 0.00 0.00 3.09
66 67 4.100189 GCTCTGACCTTTAGAAGATGGCTA 59.900 45.833 0.00 0.00 0.00 3.93
67 68 3.118445 GCTCTGACCTTTAGAAGATGGCT 60.118 47.826 0.00 0.00 0.00 4.75
68 69 3.202097 GCTCTGACCTTTAGAAGATGGC 58.798 50.000 0.00 0.00 0.00 4.40
69 70 4.478206 TGCTCTGACCTTTAGAAGATGG 57.522 45.455 0.00 0.00 0.00 3.51
70 71 6.873076 GGATATGCTCTGACCTTTAGAAGATG 59.127 42.308 0.00 0.00 0.00 2.90
71 72 6.556495 TGGATATGCTCTGACCTTTAGAAGAT 59.444 38.462 0.00 0.00 0.00 2.40
72 73 5.899547 TGGATATGCTCTGACCTTTAGAAGA 59.100 40.000 0.00 0.00 0.00 2.87
73 74 6.166984 TGGATATGCTCTGACCTTTAGAAG 57.833 41.667 0.00 0.00 0.00 2.85
74 75 5.453903 GCTGGATATGCTCTGACCTTTAGAA 60.454 44.000 0.00 0.00 0.00 2.10
75 76 4.039730 GCTGGATATGCTCTGACCTTTAGA 59.960 45.833 0.00 0.00 0.00 2.10
76 77 4.202295 TGCTGGATATGCTCTGACCTTTAG 60.202 45.833 0.00 0.00 0.00 1.85
77 78 3.711190 TGCTGGATATGCTCTGACCTTTA 59.289 43.478 0.00 0.00 0.00 1.85
78 79 2.507058 TGCTGGATATGCTCTGACCTTT 59.493 45.455 0.00 0.00 0.00 3.11
79 80 2.121948 TGCTGGATATGCTCTGACCTT 58.878 47.619 0.00 0.00 0.00 3.50
80 81 1.798626 TGCTGGATATGCTCTGACCT 58.201 50.000 0.00 0.00 0.00 3.85
81 82 2.038164 TGATGCTGGATATGCTCTGACC 59.962 50.000 0.00 0.00 0.00 4.02
82 83 3.327626 CTGATGCTGGATATGCTCTGAC 58.672 50.000 0.00 0.00 0.00 3.51
83 84 2.289506 GCTGATGCTGGATATGCTCTGA 60.290 50.000 0.00 0.00 36.03 3.27
84 85 2.077627 GCTGATGCTGGATATGCTCTG 58.922 52.381 0.00 0.00 36.03 3.35
85 86 1.003349 GGCTGATGCTGGATATGCTCT 59.997 52.381 0.00 0.00 39.59 4.09
86 87 1.271217 TGGCTGATGCTGGATATGCTC 60.271 52.381 0.00 0.00 39.59 4.26
87 88 0.769247 TGGCTGATGCTGGATATGCT 59.231 50.000 0.00 0.00 39.59 3.79
88 89 1.835494 ATGGCTGATGCTGGATATGC 58.165 50.000 0.00 0.00 39.59 3.14
89 90 3.824443 TCAAATGGCTGATGCTGGATATG 59.176 43.478 0.00 0.00 39.59 1.78
90 91 3.825014 GTCAAATGGCTGATGCTGGATAT 59.175 43.478 0.00 0.00 39.59 1.63
91 92 3.117776 AGTCAAATGGCTGATGCTGGATA 60.118 43.478 0.00 0.00 39.59 2.59
92 93 2.029623 GTCAAATGGCTGATGCTGGAT 58.970 47.619 0.00 0.00 39.59 3.41
93 94 1.005097 AGTCAAATGGCTGATGCTGGA 59.995 47.619 0.00 0.00 39.59 3.86
94 95 1.471119 AGTCAAATGGCTGATGCTGG 58.529 50.000 0.00 0.00 39.59 4.85
95 96 3.441222 TGTTAGTCAAATGGCTGATGCTG 59.559 43.478 0.00 0.00 39.59 4.41
96 97 3.689347 TGTTAGTCAAATGGCTGATGCT 58.311 40.909 0.00 0.00 39.59 3.79
97 98 3.441572 ACTGTTAGTCAAATGGCTGATGC 59.558 43.478 0.00 0.00 38.76 3.91
98 99 5.633830 AACTGTTAGTCAAATGGCTGATG 57.366 39.130 0.00 0.00 0.00 3.07
99 100 6.491403 AGAAAACTGTTAGTCAAATGGCTGAT 59.509 34.615 0.00 0.00 0.00 2.90
100 101 5.827797 AGAAAACTGTTAGTCAAATGGCTGA 59.172 36.000 0.00 0.00 0.00 4.26
101 102 6.016777 AGAGAAAACTGTTAGTCAAATGGCTG 60.017 38.462 0.00 0.00 0.00 4.85
102 103 6.016777 CAGAGAAAACTGTTAGTCAAATGGCT 60.017 38.462 0.00 0.00 33.73 4.75
103 104 6.145535 CAGAGAAAACTGTTAGTCAAATGGC 58.854 40.000 0.00 0.00 33.73 4.40
132 133 3.717707 TGAGCTCTACGCAATATGGAAC 58.282 45.455 16.19 0.00 42.61 3.62
144 145 4.479786 AACAATCTTCCCTGAGCTCTAC 57.520 45.455 16.19 0.00 0.00 2.59
163 164 3.391296 TGTGGAGATCTGCCCCTTATAAC 59.609 47.826 12.15 1.09 0.00 1.89
164 165 3.391296 GTGTGGAGATCTGCCCCTTATAA 59.609 47.826 12.15 0.00 0.00 0.98
166 167 1.771255 GTGTGGAGATCTGCCCCTTAT 59.229 52.381 12.15 0.00 0.00 1.73
167 168 1.204146 GTGTGGAGATCTGCCCCTTA 58.796 55.000 12.15 0.00 0.00 2.69
168 169 1.566298 GGTGTGGAGATCTGCCCCTT 61.566 60.000 12.15 0.00 0.00 3.95
218 219 3.425359 CGGAGACATTGTCATTGTTGAGC 60.425 47.826 18.57 0.00 34.60 4.26
219 220 3.996363 TCGGAGACATTGTCATTGTTGAG 59.004 43.478 18.57 2.12 34.60 3.02
220 221 4.001618 TCGGAGACATTGTCATTGTTGA 57.998 40.909 18.57 5.13 34.60 3.18
221 222 4.154737 ACATCGGAGACATTGTCATTGTTG 59.845 41.667 18.57 13.18 42.51 3.33
222 223 4.326826 ACATCGGAGACATTGTCATTGTT 58.673 39.130 18.57 0.00 42.51 2.83
223 224 3.942829 ACATCGGAGACATTGTCATTGT 58.057 40.909 18.57 10.73 42.51 2.71
253 256 2.164624 ACCGACCTTCTTCATTCTCTCG 59.835 50.000 0.00 0.00 0.00 4.04
254 257 3.429684 GGACCGACCTTCTTCATTCTCTC 60.430 52.174 0.00 0.00 35.41 3.20
255 258 2.498078 GGACCGACCTTCTTCATTCTCT 59.502 50.000 0.00 0.00 35.41 3.10
322 753 7.326789 ACAATTCAATGTCAGCTATTTGAAACG 59.673 33.333 13.25 10.69 0.00 3.60
331 762 6.151691 GCTCAAAACAATTCAATGTCAGCTA 58.848 36.000 0.00 0.00 31.81 3.32
333 764 4.143473 CGCTCAAAACAATTCAATGTCAGC 60.143 41.667 0.00 0.00 31.81 4.26
337 768 5.108517 ACAACGCTCAAAACAATTCAATGT 58.891 33.333 0.00 0.00 34.24 2.71
342 773 4.597079 TCAGACAACGCTCAAAACAATTC 58.403 39.130 0.00 0.00 0.00 2.17
345 776 4.427096 TTTCAGACAACGCTCAAAACAA 57.573 36.364 0.00 0.00 0.00 2.83
346 777 4.630894 ATTTCAGACAACGCTCAAAACA 57.369 36.364 0.00 0.00 0.00 2.83
347 778 6.603095 AGATATTTCAGACAACGCTCAAAAC 58.397 36.000 0.00 0.00 0.00 2.43
349 780 6.871492 TGTAGATATTTCAGACAACGCTCAAA 59.129 34.615 0.00 0.00 0.00 2.69
350 781 6.394809 TGTAGATATTTCAGACAACGCTCAA 58.605 36.000 0.00 0.00 0.00 3.02
352 783 6.697152 GTTGTAGATATTTCAGACAACGCTC 58.303 40.000 14.01 0.00 39.29 5.03
353 784 6.648725 GTTGTAGATATTTCAGACAACGCT 57.351 37.500 14.01 0.00 39.29 5.07
357 1926 9.917129 TTAAGACGTTGTAGATATTTCAGACAA 57.083 29.630 0.00 1.31 31.35 3.18
399 1968 6.462552 ACGGAGGGAGTAAAATTACTACTC 57.537 41.667 19.30 19.30 43.64 2.59
402 1971 5.960202 AGGAACGGAGGGAGTAAAATTACTA 59.040 40.000 5.84 0.00 43.64 1.82
412 1981 5.543020 CCTTATAATTAGGAACGGAGGGAGT 59.457 44.000 0.00 0.00 34.56 3.85
413 1982 5.543020 ACCTTATAATTAGGAACGGAGGGAG 59.457 44.000 0.00 0.00 36.58 4.30
414 1983 5.470501 ACCTTATAATTAGGAACGGAGGGA 58.529 41.667 0.00 0.00 36.58 4.20
415 1984 5.820404 ACCTTATAATTAGGAACGGAGGG 57.180 43.478 0.00 0.00 36.58 4.30
416 1985 8.515695 AAAAACCTTATAATTAGGAACGGAGG 57.484 34.615 0.00 0.00 36.58 4.30
449 2018 9.233649 ACAACCGTATCTTGTAATCCATTTAAA 57.766 29.630 0.00 0.00 29.81 1.52
450 2019 8.795842 ACAACCGTATCTTGTAATCCATTTAA 57.204 30.769 0.00 0.00 29.81 1.52
452 2021 8.836413 CATACAACCGTATCTTGTAATCCATTT 58.164 33.333 0.00 0.00 37.58 2.32
453 2022 7.990886 ACATACAACCGTATCTTGTAATCCATT 59.009 33.333 0.00 0.00 37.58 3.16
454 2023 7.506114 ACATACAACCGTATCTTGTAATCCAT 58.494 34.615 0.00 0.00 37.58 3.41
455 2024 6.880484 ACATACAACCGTATCTTGTAATCCA 58.120 36.000 0.00 0.00 37.58 3.41
456 2025 8.355169 TCTACATACAACCGTATCTTGTAATCC 58.645 37.037 0.00 0.00 37.58 3.01
457 2026 9.178427 GTCTACATACAACCGTATCTTGTAATC 57.822 37.037 0.00 0.00 37.58 1.75
458 2027 8.689061 TGTCTACATACAACCGTATCTTGTAAT 58.311 33.333 0.00 0.00 37.58 1.89
459 2028 8.054152 TGTCTACATACAACCGTATCTTGTAA 57.946 34.615 0.00 0.00 37.58 2.41
460 2029 7.628769 TGTCTACATACAACCGTATCTTGTA 57.371 36.000 0.00 0.00 36.11 2.41
461 2030 6.519679 TGTCTACATACAACCGTATCTTGT 57.480 37.500 0.00 0.00 36.11 3.16
462 2031 9.692749 AATATGTCTACATACAACCGTATCTTG 57.307 33.333 4.98 0.00 41.15 3.02
466 2035 9.268268 CCAAAATATGTCTACATACAACCGTAT 57.732 33.333 4.98 0.00 41.15 3.06
467 2036 8.476447 TCCAAAATATGTCTACATACAACCGTA 58.524 33.333 4.98 0.00 41.15 4.02
468 2037 7.332557 TCCAAAATATGTCTACATACAACCGT 58.667 34.615 4.98 0.00 41.15 4.83
469 2038 7.494625 ACTCCAAAATATGTCTACATACAACCG 59.505 37.037 4.98 0.00 41.15 4.44
470 2039 8.612619 CACTCCAAAATATGTCTACATACAACC 58.387 37.037 4.98 0.00 41.15 3.77
471 2040 9.162764 ACACTCCAAAATATGTCTACATACAAC 57.837 33.333 4.98 0.00 41.15 3.32
477 2046 9.817809 GAATCTACACTCCAAAATATGTCTACA 57.182 33.333 0.00 0.00 0.00 2.74
478 2047 9.817809 TGAATCTACACTCCAAAATATGTCTAC 57.182 33.333 0.00 0.00 0.00 2.59
479 2048 9.817809 GTGAATCTACACTCCAAAATATGTCTA 57.182 33.333 0.00 0.00 37.73 2.59
480 2049 8.543774 AGTGAATCTACACTCCAAAATATGTCT 58.456 33.333 0.00 0.00 46.36 3.41
481 2050 8.723942 AGTGAATCTACACTCCAAAATATGTC 57.276 34.615 0.00 0.00 46.36 3.06
494 2063 5.645497 AGGAGCAAATTGAGTGAATCTACAC 59.355 40.000 0.00 0.00 40.60 2.90
495 2064 5.809001 AGGAGCAAATTGAGTGAATCTACA 58.191 37.500 0.00 0.00 0.00 2.74
496 2065 6.749923 AAGGAGCAAATTGAGTGAATCTAC 57.250 37.500 0.00 0.00 0.00 2.59
497 2066 8.103305 AGTTAAGGAGCAAATTGAGTGAATCTA 58.897 33.333 0.00 0.00 0.00 1.98
498 2067 6.944862 AGTTAAGGAGCAAATTGAGTGAATCT 59.055 34.615 0.00 0.00 0.00 2.40
499 2068 7.150783 AGTTAAGGAGCAAATTGAGTGAATC 57.849 36.000 0.00 0.00 0.00 2.52
500 2069 7.885399 ACTAGTTAAGGAGCAAATTGAGTGAAT 59.115 33.333 0.00 0.00 0.00 2.57
501 2070 7.224297 ACTAGTTAAGGAGCAAATTGAGTGAA 58.776 34.615 0.00 0.00 0.00 3.18
502 2071 6.769512 ACTAGTTAAGGAGCAAATTGAGTGA 58.230 36.000 0.00 0.00 0.00 3.41
503 2072 6.650807 TGACTAGTTAAGGAGCAAATTGAGTG 59.349 38.462 0.00 0.00 0.00 3.51
504 2073 6.769512 TGACTAGTTAAGGAGCAAATTGAGT 58.230 36.000 0.00 0.00 0.00 3.41
505 2074 7.856145 ATGACTAGTTAAGGAGCAAATTGAG 57.144 36.000 0.00 0.00 0.00 3.02
506 2075 8.514594 CAAATGACTAGTTAAGGAGCAAATTGA 58.485 33.333 0.00 0.00 0.00 2.57
507 2076 8.299570 ACAAATGACTAGTTAAGGAGCAAATTG 58.700 33.333 0.00 2.10 0.00 2.32
508 2077 8.409358 ACAAATGACTAGTTAAGGAGCAAATT 57.591 30.769 0.00 0.00 0.00 1.82
509 2078 8.299570 CAACAAATGACTAGTTAAGGAGCAAAT 58.700 33.333 0.00 0.00 0.00 2.32
510 2079 7.255451 CCAACAAATGACTAGTTAAGGAGCAAA 60.255 37.037 0.00 0.00 0.00 3.68
511 2080 6.206634 CCAACAAATGACTAGTTAAGGAGCAA 59.793 38.462 0.00 0.00 0.00 3.91
512 2081 5.705441 CCAACAAATGACTAGTTAAGGAGCA 59.295 40.000 0.00 0.00 0.00 4.26
513 2082 5.938125 TCCAACAAATGACTAGTTAAGGAGC 59.062 40.000 0.00 0.00 0.00 4.70
514 2083 7.979444 TTCCAACAAATGACTAGTTAAGGAG 57.021 36.000 0.00 0.00 0.00 3.69
515 2084 8.383175 AGATTCCAACAAATGACTAGTTAAGGA 58.617 33.333 0.00 0.00 0.00 3.36
516 2085 8.567285 AGATTCCAACAAATGACTAGTTAAGG 57.433 34.615 0.00 0.00 0.00 2.69
520 2089 9.793259 TCTAAAGATTCCAACAAATGACTAGTT 57.207 29.630 0.00 0.00 0.00 2.24
521 2090 9.793259 TTCTAAAGATTCCAACAAATGACTAGT 57.207 29.630 0.00 0.00 0.00 2.57
524 2093 9.354673 TCTTTCTAAAGATTCCAACAAATGACT 57.645 29.630 1.00 0.00 39.95 3.41
525 2094 9.399403 GTCTTTCTAAAGATTCCAACAAATGAC 57.601 33.333 8.31 0.00 45.83 3.06
526 2095 8.576442 GGTCTTTCTAAAGATTCCAACAAATGA 58.424 33.333 8.31 0.00 45.83 2.57
527 2096 8.579863 AGGTCTTTCTAAAGATTCCAACAAATG 58.420 33.333 8.31 0.00 45.83 2.32
528 2097 8.712228 AGGTCTTTCTAAAGATTCCAACAAAT 57.288 30.769 8.31 0.00 45.83 2.32
529 2098 9.807921 ATAGGTCTTTCTAAAGATTCCAACAAA 57.192 29.630 8.31 0.00 45.83 2.83
531 2100 9.886132 GTATAGGTCTTTCTAAAGATTCCAACA 57.114 33.333 8.31 0.00 45.83 3.33
534 2103 8.925338 GGAGTATAGGTCTTTCTAAAGATTCCA 58.075 37.037 8.31 0.00 45.83 3.53
535 2104 8.369424 GGGAGTATAGGTCTTTCTAAAGATTCC 58.631 40.741 8.31 6.28 45.83 3.01
536 2105 9.150028 AGGGAGTATAGGTCTTTCTAAAGATTC 57.850 37.037 8.31 4.97 45.83 2.52
537 2106 9.150028 GAGGGAGTATAGGTCTTTCTAAAGATT 57.850 37.037 8.31 3.74 45.83 2.40
538 2107 7.731235 GGAGGGAGTATAGGTCTTTCTAAAGAT 59.269 40.741 8.31 0.00 45.83 2.40
539 2108 7.068061 GGAGGGAGTATAGGTCTTTCTAAAGA 58.932 42.308 1.00 1.00 42.41 2.52
540 2109 6.016108 CGGAGGGAGTATAGGTCTTTCTAAAG 60.016 46.154 0.00 0.00 37.36 1.85
541 2110 5.832060 CGGAGGGAGTATAGGTCTTTCTAAA 59.168 44.000 0.00 0.00 0.00 1.85
542 2111 5.103771 ACGGAGGGAGTATAGGTCTTTCTAA 60.104 44.000 0.00 0.00 0.00 2.10
543 2112 4.414846 ACGGAGGGAGTATAGGTCTTTCTA 59.585 45.833 0.00 0.00 0.00 2.10
544 2113 3.204831 ACGGAGGGAGTATAGGTCTTTCT 59.795 47.826 0.00 0.00 0.00 2.52
545 2114 3.564264 ACGGAGGGAGTATAGGTCTTTC 58.436 50.000 0.00 0.00 0.00 2.62
546 2115 3.684408 ACGGAGGGAGTATAGGTCTTT 57.316 47.619 0.00 0.00 0.00 2.52
547 2116 3.564264 GAACGGAGGGAGTATAGGTCTT 58.436 50.000 0.00 0.00 0.00 3.01
548 2117 2.158490 GGAACGGAGGGAGTATAGGTCT 60.158 54.545 0.00 0.00 0.00 3.85
549 2118 2.237643 GGAACGGAGGGAGTATAGGTC 58.762 57.143 0.00 0.00 0.00 3.85
550 2119 1.133231 GGGAACGGAGGGAGTATAGGT 60.133 57.143 0.00 0.00 0.00 3.08
551 2120 1.133262 TGGGAACGGAGGGAGTATAGG 60.133 57.143 0.00 0.00 0.00 2.57
552 2121 2.376695 TGGGAACGGAGGGAGTATAG 57.623 55.000 0.00 0.00 0.00 1.31
553 2122 2.852714 TTGGGAACGGAGGGAGTATA 57.147 50.000 0.00 0.00 0.00 1.47
554 2123 1.961133 TTTGGGAACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
555 2124 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
556 2125 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
557 2126 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
558 2127 3.010808 ACAAATATTTGGGAACGGAGGGA 59.989 43.478 27.43 0.00 42.34 4.20
559 2128 3.361786 ACAAATATTTGGGAACGGAGGG 58.638 45.455 27.43 3.22 42.34 4.30
560 2129 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
561 2130 5.897377 AAGACAAATATTTGGGAACGGAG 57.103 39.130 27.43 4.34 42.34 4.63
562 2131 6.007703 AGAAAGACAAATATTTGGGAACGGA 58.992 36.000 27.43 0.00 42.34 4.69
563 2132 6.267496 AGAAAGACAAATATTTGGGAACGG 57.733 37.500 27.43 5.66 42.34 4.44
564 2133 8.263940 TCTAGAAAGACAAATATTTGGGAACG 57.736 34.615 27.43 11.14 42.34 3.95
588 2157 9.445786 CCGTATGTTATGTCCATTTAAAATGTC 57.554 33.333 0.00 0.00 0.00 3.06
589 2158 9.179909 TCCGTATGTTATGTCCATTTAAAATGT 57.820 29.630 0.00 0.00 0.00 2.71
592 2161 9.179909 ACATCCGTATGTTATGTCCATTTAAAA 57.820 29.630 0.00 0.00 44.07 1.52
593 2162 8.740123 ACATCCGTATGTTATGTCCATTTAAA 57.260 30.769 0.00 0.00 44.07 1.52
595 2164 9.430623 CATACATCCGTATGTTATGTCCATTTA 57.569 33.333 0.00 0.00 46.70 1.40
596 2165 8.322906 CATACATCCGTATGTTATGTCCATTT 57.677 34.615 0.00 0.00 46.70 2.32
597 2166 7.905604 CATACATCCGTATGTTATGTCCATT 57.094 36.000 0.00 0.00 46.70 3.16
651 2220 9.959749 AACAAGTGATTACATACGAAACAAAAT 57.040 25.926 0.00 0.00 0.00 1.82
652 2221 9.227490 CAACAAGTGATTACATACGAAACAAAA 57.773 29.630 0.00 0.00 0.00 2.44
653 2222 8.613482 TCAACAAGTGATTACATACGAAACAAA 58.387 29.630 0.00 0.00 0.00 2.83
654 2223 8.144155 TCAACAAGTGATTACATACGAAACAA 57.856 30.769 0.00 0.00 0.00 2.83
655 2224 7.716768 TCAACAAGTGATTACATACGAAACA 57.283 32.000 0.00 0.00 0.00 2.83
656 2225 8.996988 TTTCAACAAGTGATTACATACGAAAC 57.003 30.769 0.00 0.00 35.70 2.78
657 2226 9.820229 GATTTCAACAAGTGATTACATACGAAA 57.180 29.630 0.00 0.00 35.70 3.46
658 2227 9.214957 AGATTTCAACAAGTGATTACATACGAA 57.785 29.630 0.00 0.00 35.70 3.85
659 2228 8.771920 AGATTTCAACAAGTGATTACATACGA 57.228 30.769 0.00 0.00 35.70 3.43
660 2229 8.873830 AGAGATTTCAACAAGTGATTACATACG 58.126 33.333 0.00 0.00 35.70 3.06
664 2233 9.996554 TTCTAGAGATTTCAACAAGTGATTACA 57.003 29.630 0.00 0.00 35.70 2.41
667 2236 9.784531 TCTTTCTAGAGATTTCAACAAGTGATT 57.215 29.630 0.00 0.00 35.70 2.57
668 2237 9.956640 ATCTTTCTAGAGATTTCAACAAGTGAT 57.043 29.630 0.00 0.00 32.54 3.06
684 2253 9.555727 CCGTTCCCAAATATTTATCTTTCTAGA 57.444 33.333 0.00 0.00 34.21 2.43
685 2254 9.555727 TCCGTTCCCAAATATTTATCTTTCTAG 57.444 33.333 0.00 0.00 0.00 2.43
686 2255 9.555727 CTCCGTTCCCAAATATTTATCTTTCTA 57.444 33.333 0.00 0.00 0.00 2.10
687 2256 7.502561 CCTCCGTTCCCAAATATTTATCTTTCT 59.497 37.037 0.00 0.00 0.00 2.52
688 2257 7.255486 CCCTCCGTTCCCAAATATTTATCTTTC 60.255 40.741 0.00 0.00 0.00 2.62
689 2258 6.549736 CCCTCCGTTCCCAAATATTTATCTTT 59.450 38.462 0.00 0.00 0.00 2.52
690 2259 6.068670 CCCTCCGTTCCCAAATATTTATCTT 58.931 40.000 0.00 0.00 0.00 2.40
691 2260 5.371472 TCCCTCCGTTCCCAAATATTTATCT 59.629 40.000 0.00 0.00 0.00 1.98
692 2261 5.627135 TCCCTCCGTTCCCAAATATTTATC 58.373 41.667 0.00 0.00 0.00 1.75
693 2262 5.133830 ACTCCCTCCGTTCCCAAATATTTAT 59.866 40.000 0.00 0.00 0.00 1.40
694 2263 4.475747 ACTCCCTCCGTTCCCAAATATTTA 59.524 41.667 0.00 0.00 0.00 1.40
695 2264 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
696 2265 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
697 2266 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
698 2267 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
699 2268 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
700 2269 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
701 2270 1.961133 AATACTCCCTCCGTTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
702 2271 1.557832 CAAATACTCCCTCCGTTCCCA 59.442 52.381 0.00 0.00 0.00 4.37
703 2272 1.134189 CCAAATACTCCCTCCGTTCCC 60.134 57.143 0.00 0.00 0.00 3.97
704 2273 1.134189 CCCAAATACTCCCTCCGTTCC 60.134 57.143 0.00 0.00 0.00 3.62
705 2274 1.835531 TCCCAAATACTCCCTCCGTTC 59.164 52.381 0.00 0.00 0.00 3.95
706 2275 1.961133 TCCCAAATACTCCCTCCGTT 58.039 50.000 0.00 0.00 0.00 4.44
707 2276 1.838077 CTTCCCAAATACTCCCTCCGT 59.162 52.381 0.00 0.00 0.00 4.69
708 2277 1.141053 CCTTCCCAAATACTCCCTCCG 59.859 57.143 0.00 0.00 0.00 4.63
709 2278 1.495148 CCCTTCCCAAATACTCCCTCC 59.505 57.143 0.00 0.00 0.00 4.30
710 2279 1.495148 CCCCTTCCCAAATACTCCCTC 59.505 57.143 0.00 0.00 0.00 4.30
711 2280 1.608425 CCCCTTCCCAAATACTCCCT 58.392 55.000 0.00 0.00 0.00 4.20
712 2281 0.556258 CCCCCTTCCCAAATACTCCC 59.444 60.000 0.00 0.00 0.00 4.30
728 2297 5.658198 ACACCCTTAATAAATACTCCCCC 57.342 43.478 0.00 0.00 0.00 5.40
729 2298 6.893554 ACAAACACCCTTAATAAATACTCCCC 59.106 38.462 0.00 0.00 0.00 4.81
730 2299 7.949690 ACAAACACCCTTAATAAATACTCCC 57.050 36.000 0.00 0.00 0.00 4.30
731 2300 9.676861 AGTACAAACACCCTTAATAAATACTCC 57.323 33.333 0.00 0.00 0.00 3.85
733 2302 8.953313 GCAGTACAAACACCCTTAATAAATACT 58.047 33.333 0.00 0.00 0.00 2.12
734 2303 8.953313 AGCAGTACAAACACCCTTAATAAATAC 58.047 33.333 0.00 0.00 0.00 1.89
736 2305 9.695155 ATAGCAGTACAAACACCCTTAATAAAT 57.305 29.630 0.00 0.00 0.00 1.40
793 2370 7.699391 GGTACTGTACTTGTTGTTTTTCTTTCC 59.301 37.037 16.79 0.00 0.00 3.13
795 2372 7.395206 AGGGTACTGTACTTGTTGTTTTTCTTT 59.605 33.333 16.79 0.00 0.00 2.52
796 2373 6.888088 AGGGTACTGTACTTGTTGTTTTTCTT 59.112 34.615 16.79 0.00 0.00 2.52
797 2374 6.420638 AGGGTACTGTACTTGTTGTTTTTCT 58.579 36.000 16.79 0.00 0.00 2.52
808 2385 6.326843 AGAAAAGAGTGAAGGGTACTGTACTT 59.673 38.462 16.79 5.17 0.00 2.24
816 2393 8.589701 AAAAGAAAAGAAAAGAGTGAAGGGTA 57.410 30.769 0.00 0.00 0.00 3.69
840 2417 6.346096 AGAGTGAAGTGTACTGTGCTAAAAA 58.654 36.000 0.00 0.00 0.00 1.94
841 2418 5.914033 AGAGTGAAGTGTACTGTGCTAAAA 58.086 37.500 0.00 0.00 0.00 1.52
842 2419 5.531122 AGAGTGAAGTGTACTGTGCTAAA 57.469 39.130 0.00 0.00 0.00 1.85
843 2420 5.531122 AAGAGTGAAGTGTACTGTGCTAA 57.469 39.130 0.00 0.00 0.00 3.09
844 2421 6.264744 AGTTAAGAGTGAAGTGTACTGTGCTA 59.735 38.462 0.00 0.00 0.00 3.49
845 2422 5.069251 AGTTAAGAGTGAAGTGTACTGTGCT 59.931 40.000 0.00 0.00 0.00 4.40
846 2423 5.290386 AGTTAAGAGTGAAGTGTACTGTGC 58.710 41.667 0.00 0.00 0.00 4.57
847 2424 6.504398 TGAGTTAAGAGTGAAGTGTACTGTG 58.496 40.000 0.00 0.00 0.00 3.66
848 2425 6.710597 TGAGTTAAGAGTGAAGTGTACTGT 57.289 37.500 0.00 0.00 0.00 3.55
849 2426 7.203910 AGTTGAGTTAAGAGTGAAGTGTACTG 58.796 38.462 0.00 0.00 0.00 2.74
850 2427 7.349412 AGTTGAGTTAAGAGTGAAGTGTACT 57.651 36.000 0.00 0.00 0.00 2.73
851 2428 8.328864 CAAAGTTGAGTTAAGAGTGAAGTGTAC 58.671 37.037 0.00 0.00 0.00 2.90
852 2429 7.011109 GCAAAGTTGAGTTAAGAGTGAAGTGTA 59.989 37.037 0.00 0.00 0.00 2.90
853 2430 6.183360 GCAAAGTTGAGTTAAGAGTGAAGTGT 60.183 38.462 0.00 0.00 0.00 3.55
854 2431 6.037610 AGCAAAGTTGAGTTAAGAGTGAAGTG 59.962 38.462 0.00 0.00 0.00 3.16
855 2432 6.116126 AGCAAAGTTGAGTTAAGAGTGAAGT 58.884 36.000 0.00 0.00 0.00 3.01
856 2433 6.610741 AGCAAAGTTGAGTTAAGAGTGAAG 57.389 37.500 0.00 0.00 0.00 3.02
857 2434 7.045416 TGTAGCAAAGTTGAGTTAAGAGTGAA 58.955 34.615 0.00 0.00 0.00 3.18
858 2435 6.578944 TGTAGCAAAGTTGAGTTAAGAGTGA 58.421 36.000 0.00 0.00 0.00 3.41
859 2436 6.701841 TCTGTAGCAAAGTTGAGTTAAGAGTG 59.298 38.462 0.00 0.00 0.00 3.51
860 2437 6.817184 TCTGTAGCAAAGTTGAGTTAAGAGT 58.183 36.000 0.00 0.00 0.00 3.24
861 2438 7.148641 TCTCTGTAGCAAAGTTGAGTTAAGAG 58.851 38.462 0.00 0.00 0.00 2.85
886 2464 0.779997 ACAGCTGAAATTCCCCCACT 59.220 50.000 23.35 0.00 0.00 4.00
947 2525 2.281208 GCCTGCGTGGGTGTGTTA 60.281 61.111 0.00 0.00 36.00 2.41
981 2559 4.724602 GTCTGGCTGCGCGTCAGA 62.725 66.667 25.18 25.18 45.72 3.27
1267 2851 2.465010 TAGAAGAAGGCGGGGTGGGA 62.465 60.000 0.00 0.00 0.00 4.37
1437 3021 0.822164 CGTGGAGGTCGGAAGGTAAT 59.178 55.000 0.00 0.00 0.00 1.89
1577 3179 0.875474 GAACGAAACCACGTCCCGAA 60.875 55.000 0.00 0.00 45.83 4.30
1588 3190 2.029290 TGAGTAGCCCTGAGAACGAAAC 60.029 50.000 0.00 0.00 0.00 2.78
1590 3192 1.544691 GTGAGTAGCCCTGAGAACGAA 59.455 52.381 0.00 0.00 0.00 3.85
1593 3195 1.404851 GCAGTGAGTAGCCCTGAGAAC 60.405 57.143 0.00 0.00 0.00 3.01
1647 3249 1.601903 GGCATCTTGTCGAACACAACA 59.398 47.619 0.00 0.00 40.29 3.33
1648 3250 1.873591 AGGCATCTTGTCGAACACAAC 59.126 47.619 0.00 0.00 40.29 3.32
1696 3298 3.797865 GCCTTGGCATATGCTGAAATCAC 60.798 47.826 26.12 8.37 41.70 3.06
1794 3396 4.000557 GTGGTGCACGCAGACACG 62.001 66.667 11.45 0.00 38.56 4.49
1812 3414 1.078143 AGTTGCAAGATCCCCGAGC 60.078 57.895 0.00 0.00 0.00 5.03
1889 3491 1.159285 CATGTCCATGAGTGCGTTGT 58.841 50.000 0.87 0.00 41.20 3.32
1893 3495 1.262417 GCATACATGTCCATGAGTGCG 59.738 52.381 13.93 0.00 41.20 5.34
2050 3652 0.823356 GTGTTCCCTTCTGCCAGCAA 60.823 55.000 0.00 0.00 0.00 3.91
2079 3681 0.036010 CAAGAAGCGTCACCCCATCT 60.036 55.000 1.61 0.00 0.00 2.90
2097 3699 1.741401 GTACGCCATGAGCACTGCA 60.741 57.895 3.30 0.00 44.04 4.41
2124 3726 2.352805 CCCTCCTCAACACAGCCC 59.647 66.667 0.00 0.00 0.00 5.19
2166 3768 2.786564 CTTTGCCAAAGTCGCCTCGC 62.787 60.000 9.06 0.00 33.80 5.03
2177 3779 3.030291 ACTGTGAATTCCACTTTGCCAA 58.970 40.909 2.27 0.00 45.86 4.52
2191 3793 2.631062 ACCCATAGTGTTCGACTGTGAA 59.369 45.455 0.00 0.00 44.55 3.18
2215 3817 1.300971 CGACCAAGCATGTCCACCAG 61.301 60.000 0.00 0.00 0.00 4.00
2309 3911 0.602638 CCGACAAGCACCAAGTAGCA 60.603 55.000 0.00 0.00 0.00 3.49
2394 3996 3.329520 TGAGCAAAATGTAGTACCCACCT 59.670 43.478 0.00 0.00 0.00 4.00
2457 4059 2.890808 TCATGGCACGTCTAATCTCC 57.109 50.000 0.00 0.00 0.00 3.71
2541 4143 3.452990 TGAAGGATAGCCAATGACGGTAA 59.547 43.478 0.00 0.00 36.29 2.85
2542 4144 3.035363 TGAAGGATAGCCAATGACGGTA 58.965 45.455 0.00 0.00 36.29 4.02
2543 4145 1.837439 TGAAGGATAGCCAATGACGGT 59.163 47.619 0.00 0.00 36.29 4.83
2544 4146 2.103094 TCTGAAGGATAGCCAATGACGG 59.897 50.000 0.00 0.00 36.29 4.79
2545 4147 3.459232 TCTGAAGGATAGCCAATGACG 57.541 47.619 0.00 0.00 36.29 4.35
2546 4148 4.754114 GTGATCTGAAGGATAGCCAATGAC 59.246 45.833 0.00 0.00 34.33 3.06
2547 4149 4.409901 TGTGATCTGAAGGATAGCCAATGA 59.590 41.667 0.00 0.00 34.33 2.57
2548 4150 4.711399 TGTGATCTGAAGGATAGCCAATG 58.289 43.478 0.00 0.00 34.33 2.82
2549 4151 5.378230 TTGTGATCTGAAGGATAGCCAAT 57.622 39.130 0.00 0.00 34.33 3.16
2550 4152 4.842531 TTGTGATCTGAAGGATAGCCAA 57.157 40.909 0.00 0.00 34.33 4.52
2562 4164 3.857665 GCATGCTTGTGAATTGTGATCTG 59.142 43.478 11.37 0.00 0.00 2.90
2584 4186 0.820891 GTACCATCTGGCTGGCATGG 60.821 60.000 18.96 18.96 42.59 3.66
2602 4210 8.200792 GTGTGAAGAGAAGATAGATTGGTATGT 58.799 37.037 0.00 0.00 0.00 2.29
2633 4241 8.978874 ACAAATGTGACTAATCCATATGCTTA 57.021 30.769 0.00 0.00 0.00 3.09
2647 4255 9.220767 GGAAATAAGACTAAGACAAATGTGACT 57.779 33.333 0.00 0.00 0.00 3.41
2661 4269 7.252612 TCATCACACCTTGGAAATAAGACTA 57.747 36.000 0.00 0.00 0.00 2.59
2668 4276 7.781219 TGATATCAATCATCACACCTTGGAAAT 59.219 33.333 1.98 0.00 37.20 2.17
2671 4279 6.251255 TGATATCAATCATCACACCTTGGA 57.749 37.500 1.98 0.00 37.20 3.53
2694 4302 0.676782 GCCGACAGCCTTACACCATT 60.677 55.000 0.00 0.00 34.35 3.16
2709 4317 1.053424 ACCTGAACCTTAGTTGCCGA 58.947 50.000 0.00 0.00 35.94 5.54
2710 4318 2.754946 TACCTGAACCTTAGTTGCCG 57.245 50.000 0.00 0.00 35.94 5.69
2763 4371 3.883489 TCTATGTACCATCACCTGACTCG 59.117 47.826 0.00 0.00 0.00 4.18
2837 4449 8.721478 ACAATAATGTAAGTGACAGCTAAACTG 58.279 33.333 0.00 0.00 44.91 3.16
2840 4452 8.615878 ACACAATAATGTAAGTGACAGCTAAA 57.384 30.769 0.00 0.00 42.79 1.85
2841 4453 9.884636 ATACACAATAATGTAAGTGACAGCTAA 57.115 29.630 0.00 0.00 42.79 3.09
2842 4454 9.884636 AATACACAATAATGTAAGTGACAGCTA 57.115 29.630 0.00 0.00 42.79 3.32
2843 4455 8.792830 AATACACAATAATGTAAGTGACAGCT 57.207 30.769 0.00 0.00 42.79 4.24
2862 4474 8.965172 CAAGTATGGACTCGTACATAAATACAC 58.035 37.037 3.64 0.00 38.06 2.90
2876 4488 5.292101 GTGTGTAAGCATCAAGTATGGACTC 59.708 44.000 0.00 0.00 33.58 3.36
2922 4534 4.069304 GGGTTGGTTTTAAAATTCAGGCC 58.931 43.478 3.52 0.00 0.00 5.19
2923 4535 4.069304 GGGGTTGGTTTTAAAATTCAGGC 58.931 43.478 3.52 3.97 0.00 4.85
2924 4536 5.560722 AGGGGTTGGTTTTAAAATTCAGG 57.439 39.130 3.52 0.00 0.00 3.86
2925 4537 6.587273 TGAAGGGGTTGGTTTTAAAATTCAG 58.413 36.000 3.52 0.00 0.00 3.02
2926 4538 6.561519 TGAAGGGGTTGGTTTTAAAATTCA 57.438 33.333 3.52 4.80 0.00 2.57
2927 4539 5.468746 GCTGAAGGGGTTGGTTTTAAAATTC 59.531 40.000 3.52 2.29 0.00 2.17
2928 4540 5.104318 TGCTGAAGGGGTTGGTTTTAAAATT 60.104 36.000 3.52 0.00 0.00 1.82
2929 4541 4.410555 TGCTGAAGGGGTTGGTTTTAAAAT 59.589 37.500 3.52 0.00 0.00 1.82
2950 4577 5.112686 CCTGGTAGTCAAGACTTAAGATGC 58.887 45.833 10.09 0.00 42.54 3.91
2957 4584 2.047061 TGCACCTGGTAGTCAAGACTT 58.953 47.619 8.17 0.00 42.54 3.01
3031 4664 5.114780 CAAGGTGAGATGATACCAGTCTTG 58.885 45.833 0.00 0.00 39.46 3.02
3037 4670 2.418609 CGCACAAGGTGAGATGATACCA 60.419 50.000 0.00 0.00 39.46 3.25
3038 4671 2.205074 CGCACAAGGTGAGATGATACC 58.795 52.381 0.00 0.00 35.44 2.73
3080 4713 3.423539 TCATCAACTTCTGGGTTCTGG 57.576 47.619 0.00 0.00 0.00 3.86
3081 4714 5.972107 ATTTCATCAACTTCTGGGTTCTG 57.028 39.130 0.00 0.00 0.00 3.02
3082 4715 6.434340 GGTAATTTCATCAACTTCTGGGTTCT 59.566 38.462 0.00 0.00 0.00 3.01
3083 4716 6.208599 TGGTAATTTCATCAACTTCTGGGTTC 59.791 38.462 0.00 0.00 0.00 3.62
3084 4717 6.074648 TGGTAATTTCATCAACTTCTGGGTT 58.925 36.000 0.00 0.00 0.00 4.11
3085 4718 5.640147 TGGTAATTTCATCAACTTCTGGGT 58.360 37.500 0.00 0.00 0.00 4.51
3086 4719 6.209391 AGTTGGTAATTTCATCAACTTCTGGG 59.791 38.462 1.68 0.00 44.88 4.45
3094 4727 8.231692 TCACTTGAAGTTGGTAATTTCATCAA 57.768 30.769 0.00 0.00 37.05 2.57
3104 4737 8.380099 ACAAGGTATAATCACTTGAAGTTGGTA 58.620 33.333 10.25 0.00 43.13 3.25
3177 4815 9.190317 AGTTCAAATTTAAAGACTTCTGGAACT 57.810 29.630 0.00 0.00 36.29 3.01
3178 4816 9.452065 GAGTTCAAATTTAAAGACTTCTGGAAC 57.548 33.333 0.00 0.00 0.00 3.62
3190 4832 6.479660 CAGCAAGGCAAGAGTTCAAATTTAAA 59.520 34.615 0.00 0.00 0.00 1.52
3221 4863 6.017026 GCTAAGTTTATGCTAACAATCCCTCC 60.017 42.308 0.00 0.00 0.00 4.30
3267 4909 1.946768 GTGTGCCACACTGCTTTTCTA 59.053 47.619 20.46 0.00 45.27 2.10
3283 4925 5.996219 TCAACGGAAAATGATTGTAGTGTG 58.004 37.500 0.00 0.00 0.00 3.82
3307 4949 7.793927 AGAAAACCTATCACTTGCTAATAGC 57.206 36.000 5.12 5.12 42.82 2.97
3387 5030 6.431198 TTTGTGGACTTTAACTGTCAACTC 57.569 37.500 13.39 0.00 38.73 3.01
3389 5032 7.544217 ACATTTTTGTGGACTTTAACTGTCAAC 59.456 33.333 7.88 7.88 38.49 3.18
3419 5062 6.524586 CCAGAACTTGTTAAAATGAAGATCGC 59.475 38.462 0.00 0.00 0.00 4.58
3420 5063 7.023575 CCCAGAACTTGTTAAAATGAAGATCG 58.976 38.462 0.00 0.00 0.00 3.69
3424 5067 6.648879 TCCCCAGAACTTGTTAAAATGAAG 57.351 37.500 0.00 0.00 0.00 3.02
3446 5089 3.853355 ACATGGAATCTGTGAGGGATC 57.147 47.619 0.00 0.00 0.00 3.36
3474 5117 3.202706 GGGATTCCGAACGCAGCC 61.203 66.667 0.00 0.00 0.00 4.85
3475 5118 2.125106 AGGGATTCCGAACGCAGC 60.125 61.111 0.00 0.00 38.33 5.25
3476 5119 1.521681 GGAGGGATTCCGAACGCAG 60.522 63.158 0.00 0.00 35.91 5.18
3477 5120 2.582436 GGAGGGATTCCGAACGCA 59.418 61.111 0.00 0.00 35.91 5.24
3484 5127 1.056660 TTATGGAGCGGAGGGATTCC 58.943 55.000 0.00 0.00 43.04 3.01
3485 5128 1.694696 AGTTATGGAGCGGAGGGATTC 59.305 52.381 0.00 0.00 0.00 2.52
3486 5129 1.694696 GAGTTATGGAGCGGAGGGATT 59.305 52.381 0.00 0.00 0.00 3.01
3487 5130 1.343069 GAGTTATGGAGCGGAGGGAT 58.657 55.000 0.00 0.00 0.00 3.85
3488 5131 0.759436 GGAGTTATGGAGCGGAGGGA 60.759 60.000 0.00 0.00 0.00 4.20
3489 5132 0.760945 AGGAGTTATGGAGCGGAGGG 60.761 60.000 0.00 0.00 0.00 4.30
3490 5133 1.069358 GAAGGAGTTATGGAGCGGAGG 59.931 57.143 0.00 0.00 0.00 4.30
3491 5134 1.269309 CGAAGGAGTTATGGAGCGGAG 60.269 57.143 0.00 0.00 0.00 4.63
3492 5135 0.744874 CGAAGGAGTTATGGAGCGGA 59.255 55.000 0.00 0.00 0.00 5.54
3493 5136 0.876342 GCGAAGGAGTTATGGAGCGG 60.876 60.000 0.00 0.00 0.00 5.52
3494 5137 1.209275 CGCGAAGGAGTTATGGAGCG 61.209 60.000 0.00 0.00 40.37 5.03
3495 5138 0.876342 CCGCGAAGGAGTTATGGAGC 60.876 60.000 8.23 0.00 45.00 4.70
3496 5139 0.744874 TCCGCGAAGGAGTTATGGAG 59.255 55.000 8.23 0.00 45.98 3.86
3497 5140 2.890612 TCCGCGAAGGAGTTATGGA 58.109 52.632 8.23 0.00 45.98 3.41
3512 5155 2.892425 GAATGCCACTCCGCTCCG 60.892 66.667 0.00 0.00 0.00 4.63
3513 5156 1.817099 CTGAATGCCACTCCGCTCC 60.817 63.158 0.00 0.00 0.00 4.70
3514 5157 0.175760 TACTGAATGCCACTCCGCTC 59.824 55.000 0.00 0.00 0.00 5.03
3515 5158 0.176680 CTACTGAATGCCACTCCGCT 59.823 55.000 0.00 0.00 0.00 5.52
3516 5159 0.175760 TCTACTGAATGCCACTCCGC 59.824 55.000 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.