Multiple sequence alignment - TraesCS4D01G282500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G282500 chr4D 100.000 4536 0 0 1 4536 453452551 453457086 0.000000e+00 8377
1 TraesCS4D01G282500 chr4B 89.818 2475 123 46 629 3051 567173253 567175650 0.000000e+00 3055
2 TraesCS4D01G282500 chr4B 93.325 764 31 10 3060 3818 567175719 567176467 0.000000e+00 1110
3 TraesCS4D01G282500 chr4B 89.655 609 39 7 3449 4038 522238322 522237719 0.000000e+00 754
4 TraesCS4D01G282500 chr4B 84.966 592 66 18 3918 4503 567176718 567177292 3.040000e-161 579
5 TraesCS4D01G282500 chr4A 92.136 852 42 14 796 1626 13659164 13658317 0.000000e+00 1179
6 TraesCS4D01G282500 chr4A 92.500 640 37 7 3187 3818 13656824 13656188 0.000000e+00 905
7 TraesCS4D01G282500 chr4A 82.173 1049 118 27 1683 2686 13658409 13657385 0.000000e+00 837
8 TraesCS4D01G282500 chr4A 84.756 656 70 20 3891 4536 13656004 13655369 8.280000e-177 630
9 TraesCS4D01G282500 chr5B 91.434 502 25 5 3447 3932 441419503 441419004 0.000000e+00 673
10 TraesCS4D01G282500 chr7B 89.027 483 32 6 3572 4038 531362099 531362576 3.040000e-161 579
11 TraesCS4D01G282500 chr7B 94.030 134 5 1 3447 3577 531353627 531353760 2.770000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G282500 chr4D 453452551 453457086 4535 False 8377.000000 8377 100.000000 1 4536 1 chr4D.!!$F1 4535
1 TraesCS4D01G282500 chr4B 567173253 567177292 4039 False 1581.333333 3055 89.369667 629 4503 3 chr4B.!!$F1 3874
2 TraesCS4D01G282500 chr4B 522237719 522238322 603 True 754.000000 754 89.655000 3449 4038 1 chr4B.!!$R1 589
3 TraesCS4D01G282500 chr4A 13655369 13659164 3795 True 887.750000 1179 87.891250 796 4536 4 chr4A.!!$R1 3740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
435 436 0.027716 CGGACATGGAGACGTACGAG 59.972 60.0 24.41 4.92 0.0 4.18 F
576 577 0.094730 GCGAACGTTTGAGAATCCGG 59.905 55.0 19.90 0.00 0.0 5.14 F
753 754 0.099791 CGCACGTCCAACCAAAAACT 59.900 50.0 0.00 0.00 0.0 2.66 F
1547 1582 0.109412 GTACGGTAGAGTTGCGTGCT 60.109 55.0 0.00 0.00 0.0 4.40 F
1548 1583 0.109458 TACGGTAGAGTTGCGTGCTG 60.109 55.0 0.00 0.00 0.0 4.41 F
1748 1801 0.163788 CTGTTTGAGGCTTGTACGCG 59.836 55.0 3.53 3.53 0.0 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2387 2488 1.071605 CAAGCTCCCTTTCGACTTCG 58.928 55.0 0.00 0.0 41.45 3.79 R
2557 2658 0.403271 AAGCAGGACAGTTGGCTGAT 59.597 50.0 1.30 0.0 45.28 2.90 R
2725 2866 2.583566 ACTAGGGAGCCTTACAGTCTCT 59.416 50.0 0.00 0.0 34.61 3.10 R
2778 2919 0.033228 TTGCAATGCCCTTTTGGTCG 59.967 50.0 1.53 0.0 38.10 4.79 R
2986 3130 0.300789 GCTACGCTTACCGCATTGAC 59.699 55.0 0.00 0.0 41.76 3.18 R
3585 3807 1.098050 CATAGGGCCTGTGCTTCAAC 58.902 55.0 17.79 0.0 37.74 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.373938 GACAACCTCTTCGATGGCG 58.626 57.895 0.00 0.00 39.35 5.69
19 20 0.389948 GACAACCTCTTCGATGGCGT 60.390 55.000 0.00 0.00 38.98 5.68
20 21 0.670546 ACAACCTCTTCGATGGCGTG 60.671 55.000 0.00 1.51 38.98 5.34
21 22 0.670546 CAACCTCTTCGATGGCGTGT 60.671 55.000 0.00 0.00 38.98 4.49
22 23 0.389948 AACCTCTTCGATGGCGTGTC 60.390 55.000 0.00 0.00 38.98 3.67
23 24 1.215382 CCTCTTCGATGGCGTGTCA 59.785 57.895 0.00 0.00 38.98 3.58
24 25 0.389817 CCTCTTCGATGGCGTGTCAA 60.390 55.000 0.00 0.00 38.98 3.18
25 26 0.716108 CTCTTCGATGGCGTGTCAAC 59.284 55.000 0.00 0.00 38.98 3.18
26 27 0.669318 TCTTCGATGGCGTGTCAACC 60.669 55.000 0.00 0.00 38.98 3.77
27 28 1.635663 CTTCGATGGCGTGTCAACCC 61.636 60.000 0.00 0.00 38.98 4.11
28 29 3.124921 CGATGGCGTGTCAACCCC 61.125 66.667 0.00 0.00 0.00 4.95
29 30 2.033448 GATGGCGTGTCAACCCCA 59.967 61.111 0.00 0.00 38.61 4.96
30 31 2.282180 ATGGCGTGTCAACCCCAC 60.282 61.111 0.00 0.00 37.07 4.61
59 60 4.364817 CGGAGGTAAACGTTGGCA 57.635 55.556 0.00 0.00 0.00 4.92
60 61 2.849081 CGGAGGTAAACGTTGGCAT 58.151 52.632 0.00 0.00 0.00 4.40
61 62 0.446222 CGGAGGTAAACGTTGGCATG 59.554 55.000 0.00 0.00 0.00 4.06
62 63 1.816074 GGAGGTAAACGTTGGCATGA 58.184 50.000 0.00 0.00 0.00 3.07
63 64 1.467342 GGAGGTAAACGTTGGCATGAC 59.533 52.381 0.00 0.00 0.00 3.06
64 65 2.423577 GAGGTAAACGTTGGCATGACT 58.576 47.619 0.00 0.00 0.00 3.41
65 66 2.415512 GAGGTAAACGTTGGCATGACTC 59.584 50.000 0.00 0.00 0.00 3.36
66 67 2.147958 GGTAAACGTTGGCATGACTCA 58.852 47.619 0.00 0.00 0.00 3.41
67 68 2.747446 GGTAAACGTTGGCATGACTCAT 59.253 45.455 0.00 0.00 0.00 2.90
68 69 2.995466 AAACGTTGGCATGACTCATG 57.005 45.000 13.90 13.90 43.91 3.07
69 70 1.167851 AACGTTGGCATGACTCATGG 58.832 50.000 18.74 6.04 41.64 3.66
77 78 2.602878 GCATGACTCATGGCACTTTTG 58.397 47.619 18.74 0.00 41.64 2.44
86 87 4.272100 GCACTTTTGCTGCCATGG 57.728 55.556 7.63 7.63 46.17 3.66
87 88 1.667151 GCACTTTTGCTGCCATGGA 59.333 52.632 18.40 0.00 46.17 3.41
88 89 0.389426 GCACTTTTGCTGCCATGGAG 60.389 55.000 18.40 11.30 46.17 3.86
89 90 0.389426 CACTTTTGCTGCCATGGAGC 60.389 55.000 18.40 20.84 36.95 4.70
90 91 0.828762 ACTTTTGCTGCCATGGAGCA 60.829 50.000 25.68 25.68 44.75 4.26
105 106 4.380628 GCAGCGTGCTCACTGTGC 62.381 66.667 2.12 7.41 40.96 4.57
106 107 4.068282 CAGCGTGCTCACTGTGCG 62.068 66.667 2.12 0.00 0.00 5.34
107 108 4.284860 AGCGTGCTCACTGTGCGA 62.285 61.111 2.12 0.00 0.00 5.10
108 109 3.771491 GCGTGCTCACTGTGCGAG 61.771 66.667 2.12 0.00 0.00 5.03
109 110 3.108289 CGTGCTCACTGTGCGAGG 61.108 66.667 2.12 0.00 0.00 4.63
110 111 3.418068 GTGCTCACTGTGCGAGGC 61.418 66.667 2.12 5.57 0.00 4.70
111 112 3.927548 TGCTCACTGTGCGAGGCA 61.928 61.111 2.12 7.99 35.60 4.75
112 113 3.117171 GCTCACTGTGCGAGGCAG 61.117 66.667 2.12 0.00 40.08 4.85
113 114 2.653115 CTCACTGTGCGAGGCAGA 59.347 61.111 2.12 0.00 40.08 4.26
114 115 1.217511 CTCACTGTGCGAGGCAGAT 59.782 57.895 2.12 0.00 40.08 2.90
115 116 1.079612 TCACTGTGCGAGGCAGATG 60.080 57.895 2.12 4.02 40.08 2.90
116 117 2.104859 CACTGTGCGAGGCAGATGG 61.105 63.158 8.02 0.00 40.08 3.51
117 118 3.200593 CTGTGCGAGGCAGATGGC 61.201 66.667 0.00 0.00 40.08 4.40
157 158 4.427661 GCGCAGAGGCAGAGTCGT 62.428 66.667 0.30 0.00 41.24 4.34
158 159 3.052620 GCGCAGAGGCAGAGTCGTA 62.053 63.158 0.30 0.00 41.24 3.43
159 160 1.226435 CGCAGAGGCAGAGTCGTAC 60.226 63.158 0.00 0.00 41.24 3.67
160 161 1.883732 GCAGAGGCAGAGTCGTACA 59.116 57.895 0.00 0.00 40.72 2.90
161 162 0.456995 GCAGAGGCAGAGTCGTACAC 60.457 60.000 0.00 0.00 40.72 2.90
162 163 0.171455 CAGAGGCAGAGTCGTACACC 59.829 60.000 0.00 0.00 0.00 4.16
163 164 1.136984 GAGGCAGAGTCGTACACCG 59.863 63.158 0.00 0.00 38.13 4.94
164 165 2.506438 GGCAGAGTCGTACACCGC 60.506 66.667 0.00 0.00 36.19 5.68
165 166 2.567049 GCAGAGTCGTACACCGCT 59.433 61.111 0.00 0.00 36.19 5.52
166 167 1.514443 GCAGAGTCGTACACCGCTC 60.514 63.158 0.00 0.00 38.88 5.03
167 168 1.924320 GCAGAGTCGTACACCGCTCT 61.924 60.000 0.00 0.00 44.92 4.09
168 169 2.172534 AGAGTCGTACACCGCTCTG 58.827 57.895 7.52 0.00 43.52 3.35
169 170 1.136984 GAGTCGTACACCGCTCTGG 59.863 63.158 0.00 0.00 46.41 3.86
178 179 4.711980 CCGCTCTGGTGTCGATAC 57.288 61.111 3.32 3.32 0.00 2.24
179 180 1.298413 CCGCTCTGGTGTCGATACG 60.298 63.158 6.20 0.00 0.00 3.06
180 181 1.298413 CGCTCTGGTGTCGATACGG 60.298 63.158 6.20 2.25 0.00 4.02
181 182 1.065928 GCTCTGGTGTCGATACGGG 59.934 63.158 6.20 1.90 0.00 5.28
182 183 1.664321 GCTCTGGTGTCGATACGGGT 61.664 60.000 6.20 0.00 0.00 5.28
183 184 0.100682 CTCTGGTGTCGATACGGGTG 59.899 60.000 6.20 0.00 0.00 4.61
184 185 0.322726 TCTGGTGTCGATACGGGTGA 60.323 55.000 6.20 0.00 0.00 4.02
185 186 0.179145 CTGGTGTCGATACGGGTGAC 60.179 60.000 6.20 0.00 0.00 3.67
198 199 4.736896 GTGACCGACACCCCTCGC 62.737 72.222 0.00 0.00 43.05 5.03
217 218 3.928769 CCGCATCGCATCGTGGTG 61.929 66.667 0.00 0.00 0.00 4.17
218 219 3.928769 CGCATCGCATCGTGGTGG 61.929 66.667 0.00 0.00 0.00 4.61
219 220 2.511373 GCATCGCATCGTGGTGGA 60.511 61.111 0.00 0.00 0.00 4.02
220 221 2.528743 GCATCGCATCGTGGTGGAG 61.529 63.158 0.00 0.00 0.00 3.86
221 222 1.884464 CATCGCATCGTGGTGGAGG 60.884 63.158 0.00 0.00 0.00 4.30
222 223 2.359169 ATCGCATCGTGGTGGAGGT 61.359 57.895 0.00 0.00 0.00 3.85
223 224 2.578163 ATCGCATCGTGGTGGAGGTG 62.578 60.000 0.00 0.00 0.00 4.00
224 225 2.347490 GCATCGTGGTGGAGGTGT 59.653 61.111 0.00 0.00 0.00 4.16
225 226 1.741770 GCATCGTGGTGGAGGTGTC 60.742 63.158 0.00 0.00 0.00 3.67
226 227 1.446099 CATCGTGGTGGAGGTGTCG 60.446 63.158 0.00 0.00 0.00 4.35
227 228 1.605451 ATCGTGGTGGAGGTGTCGA 60.605 57.895 0.00 0.00 0.00 4.20
228 229 1.595993 ATCGTGGTGGAGGTGTCGAG 61.596 60.000 0.00 0.00 0.00 4.04
229 230 2.048127 GTGGTGGAGGTGTCGAGC 60.048 66.667 0.00 0.00 0.00 5.03
230 231 2.203640 TGGTGGAGGTGTCGAGCT 60.204 61.111 0.00 0.00 30.75 4.09
231 232 2.276116 TGGTGGAGGTGTCGAGCTC 61.276 63.158 2.73 2.73 44.66 4.09
235 236 4.580835 GAGGTGTCGAGCTCCAAC 57.419 61.111 8.47 7.55 40.31 3.77
236 237 1.079750 GAGGTGTCGAGCTCCAACC 60.080 63.158 15.93 15.93 40.31 3.77
237 238 1.816863 GAGGTGTCGAGCTCCAACCA 61.817 60.000 22.44 7.34 40.31 3.67
238 239 1.668151 GGTGTCGAGCTCCAACCAC 60.668 63.158 17.89 13.86 0.00 4.16
239 240 2.022129 GTGTCGAGCTCCAACCACG 61.022 63.158 8.47 0.00 0.00 4.94
240 241 2.197605 TGTCGAGCTCCAACCACGA 61.198 57.895 8.47 0.00 0.00 4.35
241 242 1.215647 GTCGAGCTCCAACCACGAT 59.784 57.895 8.47 0.00 35.57 3.73
242 243 1.078759 GTCGAGCTCCAACCACGATG 61.079 60.000 8.47 0.00 35.57 3.84
243 244 1.811266 CGAGCTCCAACCACGATGG 60.811 63.158 8.47 0.00 45.02 3.51
244 245 1.450312 GAGCTCCAACCACGATGGG 60.450 63.158 0.87 0.64 43.37 4.00
245 246 2.185310 GAGCTCCAACCACGATGGGT 62.185 60.000 0.87 0.00 43.37 4.51
246 247 1.745489 GCTCCAACCACGATGGGTC 60.745 63.158 8.57 0.00 43.37 4.46
247 248 1.983224 CTCCAACCACGATGGGTCT 59.017 57.895 8.57 0.00 43.37 3.85
248 249 1.191535 CTCCAACCACGATGGGTCTA 58.808 55.000 8.57 0.00 43.37 2.59
249 250 1.762957 CTCCAACCACGATGGGTCTAT 59.237 52.381 8.57 0.00 43.37 1.98
250 251 1.760613 TCCAACCACGATGGGTCTATC 59.239 52.381 8.57 0.00 43.37 2.08
251 252 1.484653 CCAACCACGATGGGTCTATCA 59.515 52.381 8.57 0.00 43.37 2.15
252 253 2.104792 CCAACCACGATGGGTCTATCAT 59.895 50.000 8.57 0.00 43.37 2.45
253 254 3.133691 CAACCACGATGGGTCTATCATG 58.866 50.000 8.57 0.00 43.37 3.07
254 255 1.694150 ACCACGATGGGTCTATCATGG 59.306 52.381 7.67 7.67 43.97 3.66
255 256 1.970640 CCACGATGGGTCTATCATGGA 59.029 52.381 3.80 0.00 41.66 3.41
256 257 2.289072 CCACGATGGGTCTATCATGGAC 60.289 54.545 3.80 0.00 41.66 4.02
257 258 1.613925 ACGATGGGTCTATCATGGACG 59.386 52.381 0.00 0.00 34.82 4.79
258 259 1.613925 CGATGGGTCTATCATGGACGT 59.386 52.381 0.00 0.00 34.82 4.34
259 260 2.608016 CGATGGGTCTATCATGGACGTG 60.608 54.545 0.00 0.00 34.82 4.49
260 261 2.153034 TGGGTCTATCATGGACGTGA 57.847 50.000 0.00 0.00 34.82 4.35
261 262 1.754803 TGGGTCTATCATGGACGTGAC 59.245 52.381 0.00 0.00 34.82 3.67
262 263 1.754803 GGGTCTATCATGGACGTGACA 59.245 52.381 0.00 0.00 34.82 3.58
263 264 2.365617 GGGTCTATCATGGACGTGACAT 59.634 50.000 0.00 0.00 34.82 3.06
264 265 3.553096 GGGTCTATCATGGACGTGACATC 60.553 52.174 0.00 0.00 34.82 3.06
265 266 3.300857 GTCTATCATGGACGTGACATCG 58.699 50.000 0.00 0.00 0.00 3.84
266 267 3.003378 GTCTATCATGGACGTGACATCGA 59.997 47.826 0.00 0.00 34.70 3.59
267 268 2.209838 ATCATGGACGTGACATCGAC 57.790 50.000 0.00 0.00 34.70 4.20
268 269 1.173913 TCATGGACGTGACATCGACT 58.826 50.000 0.00 0.00 34.70 4.18
269 270 1.135402 TCATGGACGTGACATCGACTG 60.135 52.381 0.00 0.00 34.70 3.51
270 271 0.173481 ATGGACGTGACATCGACTGG 59.827 55.000 0.00 0.00 34.70 4.00
271 272 1.176619 TGGACGTGACATCGACTGGT 61.177 55.000 0.00 0.00 34.70 4.00
272 273 0.732880 GGACGTGACATCGACTGGTG 60.733 60.000 0.00 0.00 34.70 4.17
273 274 0.240145 GACGTGACATCGACTGGTGA 59.760 55.000 0.00 0.00 34.70 4.02
274 275 0.039437 ACGTGACATCGACTGGTGAC 60.039 55.000 0.00 0.00 34.70 3.67
275 276 0.241213 CGTGACATCGACTGGTGACT 59.759 55.000 0.00 0.00 0.00 3.41
276 277 1.729472 CGTGACATCGACTGGTGACTC 60.729 57.143 0.00 0.00 0.00 3.36
277 278 0.888619 TGACATCGACTGGTGACTCC 59.111 55.000 0.00 0.00 0.00 3.85
278 279 0.173708 GACATCGACTGGTGACTCCC 59.826 60.000 0.00 0.00 34.77 4.30
279 280 0.541998 ACATCGACTGGTGACTCCCA 60.542 55.000 0.00 0.00 34.77 4.37
284 285 2.930019 CTGGTGACTCCCAGGCCA 60.930 66.667 5.01 0.00 46.89 5.36
285 286 3.249189 TGGTGACTCCCAGGCCAC 61.249 66.667 5.01 0.00 34.77 5.01
286 287 2.930562 GGTGACTCCCAGGCCACT 60.931 66.667 5.01 0.00 0.00 4.00
287 288 1.612442 GGTGACTCCCAGGCCACTA 60.612 63.158 5.01 0.00 0.00 2.74
288 289 1.617947 GGTGACTCCCAGGCCACTAG 61.618 65.000 5.01 0.00 0.00 2.57
289 290 1.990060 TGACTCCCAGGCCACTAGC 60.990 63.158 5.01 0.00 42.60 3.42
290 291 1.687493 GACTCCCAGGCCACTAGCT 60.687 63.158 5.01 0.00 43.05 3.32
291 292 1.681486 GACTCCCAGGCCACTAGCTC 61.681 65.000 5.01 0.00 43.05 4.09
292 293 2.365635 TCCCAGGCCACTAGCTCC 60.366 66.667 5.01 0.00 43.05 4.70
293 294 3.854669 CCCAGGCCACTAGCTCCG 61.855 72.222 5.01 0.00 43.05 4.63
294 295 2.759973 CCAGGCCACTAGCTCCGA 60.760 66.667 5.01 0.00 43.05 4.55
295 296 2.496817 CAGGCCACTAGCTCCGAC 59.503 66.667 5.01 0.00 43.05 4.79
296 297 3.141488 AGGCCACTAGCTCCGACG 61.141 66.667 5.01 0.00 43.05 5.12
297 298 3.138798 GGCCACTAGCTCCGACGA 61.139 66.667 0.00 0.00 43.05 4.20
298 299 2.409651 GCCACTAGCTCCGACGAG 59.590 66.667 0.00 0.00 38.99 4.18
299 300 2.408241 GCCACTAGCTCCGACGAGT 61.408 63.158 0.00 0.00 38.49 4.18
300 301 1.094073 GCCACTAGCTCCGACGAGTA 61.094 60.000 0.00 0.00 38.49 2.59
301 302 1.376543 CCACTAGCTCCGACGAGTAA 58.623 55.000 0.00 0.00 38.49 2.24
302 303 1.331138 CCACTAGCTCCGACGAGTAAG 59.669 57.143 0.00 0.00 38.49 2.34
303 304 2.277969 CACTAGCTCCGACGAGTAAGA 58.722 52.381 0.00 0.00 38.49 2.10
304 305 2.285756 CACTAGCTCCGACGAGTAAGAG 59.714 54.545 0.00 0.00 38.49 2.85
305 306 4.694102 GCTCCGACGAGTAAGAGC 57.306 61.111 7.19 7.19 44.36 4.09
307 308 3.907927 CTCCGACGAGTAAGAGCAG 57.092 57.895 0.00 0.00 0.00 4.24
308 309 0.378962 CTCCGACGAGTAAGAGCAGG 59.621 60.000 0.00 0.00 0.00 4.85
309 310 1.030488 TCCGACGAGTAAGAGCAGGG 61.030 60.000 0.00 0.00 0.00 4.45
310 311 1.226717 CGACGAGTAAGAGCAGGGC 60.227 63.158 0.00 0.00 0.00 5.19
311 312 1.890894 GACGAGTAAGAGCAGGGCA 59.109 57.895 0.00 0.00 0.00 5.36
312 313 0.461961 GACGAGTAAGAGCAGGGCAT 59.538 55.000 0.00 0.00 0.00 4.40
313 314 0.176680 ACGAGTAAGAGCAGGGCATG 59.823 55.000 0.00 0.00 0.00 4.06
314 315 0.531532 CGAGTAAGAGCAGGGCATGG 60.532 60.000 0.00 0.00 0.00 3.66
315 316 0.179034 GAGTAAGAGCAGGGCATGGG 60.179 60.000 0.00 0.00 0.00 4.00
316 317 0.621571 AGTAAGAGCAGGGCATGGGA 60.622 55.000 0.00 0.00 0.00 4.37
317 318 0.179034 GTAAGAGCAGGGCATGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
318 319 0.326522 TAAGAGCAGGGCATGGGAGA 60.327 55.000 0.00 0.00 0.00 3.71
319 320 1.919600 AAGAGCAGGGCATGGGAGAC 61.920 60.000 0.00 0.00 0.00 3.36
320 321 3.746949 GAGCAGGGCATGGGAGACG 62.747 68.421 0.00 0.00 0.00 4.18
321 322 4.864334 GCAGGGCATGGGAGACGG 62.864 72.222 0.00 0.00 0.00 4.79
322 323 4.864334 CAGGGCATGGGAGACGGC 62.864 72.222 0.00 0.00 0.00 5.68
332 333 4.492160 GAGACGGCGGTGCATCGA 62.492 66.667 26.37 0.00 0.00 3.59
333 334 4.498520 AGACGGCGGTGCATCGAG 62.499 66.667 26.37 18.44 0.00 4.04
334 335 4.796231 GACGGCGGTGCATCGAGT 62.796 66.667 26.37 21.79 0.00 4.18
335 336 4.796231 ACGGCGGTGCATCGAGTC 62.796 66.667 26.37 10.61 0.00 3.36
338 339 4.451150 GCGGTGCATCGAGTCCCA 62.451 66.667 26.37 0.00 0.00 4.37
339 340 2.501128 CGGTGCATCGAGTCCCAT 59.499 61.111 15.97 0.00 0.00 4.00
340 341 1.884464 CGGTGCATCGAGTCCCATG 60.884 63.158 15.97 0.00 0.00 3.66
341 342 1.522092 GGTGCATCGAGTCCCATGA 59.478 57.895 0.00 0.00 0.00 3.07
342 343 0.531532 GGTGCATCGAGTCCCATGAG 60.532 60.000 0.00 0.00 0.00 2.90
343 344 1.144716 TGCATCGAGTCCCATGAGC 59.855 57.895 0.00 0.00 0.00 4.26
344 345 1.596477 GCATCGAGTCCCATGAGCC 60.596 63.158 0.00 0.00 0.00 4.70
345 346 1.300465 CATCGAGTCCCATGAGCCG 60.300 63.158 0.00 0.00 0.00 5.52
346 347 2.502492 ATCGAGTCCCATGAGCCGG 61.502 63.158 0.00 0.00 0.00 6.13
347 348 3.461773 CGAGTCCCATGAGCCGGT 61.462 66.667 1.90 0.00 0.00 5.28
348 349 2.501610 GAGTCCCATGAGCCGGTC 59.498 66.667 1.90 0.00 0.00 4.79
349 350 2.039624 AGTCCCATGAGCCGGTCT 59.960 61.111 1.90 0.00 0.00 3.85
350 351 0.755698 GAGTCCCATGAGCCGGTCTA 60.756 60.000 1.90 0.00 0.00 2.59
351 352 0.105453 AGTCCCATGAGCCGGTCTAT 60.105 55.000 1.90 0.00 0.00 1.98
352 353 0.034059 GTCCCATGAGCCGGTCTATG 59.966 60.000 1.90 5.15 0.00 2.23
353 354 0.398522 TCCCATGAGCCGGTCTATGT 60.399 55.000 1.90 0.00 0.00 2.29
354 355 0.034059 CCCATGAGCCGGTCTATGTC 59.966 60.000 1.90 0.00 0.00 3.06
355 356 0.034059 CCATGAGCCGGTCTATGTCC 59.966 60.000 1.90 0.00 0.00 4.02
356 357 0.034059 CATGAGCCGGTCTATGTCCC 59.966 60.000 1.90 0.00 0.00 4.46
357 358 0.398522 ATGAGCCGGTCTATGTCCCA 60.399 55.000 1.90 0.00 0.00 4.37
358 359 0.398522 TGAGCCGGTCTATGTCCCAT 60.399 55.000 1.90 0.00 0.00 4.00
359 360 1.133294 TGAGCCGGTCTATGTCCCATA 60.133 52.381 1.90 0.00 0.00 2.74
360 361 2.180276 GAGCCGGTCTATGTCCCATAT 58.820 52.381 1.90 0.00 0.00 1.78
361 362 1.902508 AGCCGGTCTATGTCCCATATG 59.097 52.381 1.90 0.00 0.00 1.78
362 363 1.066143 GCCGGTCTATGTCCCATATGG 60.066 57.143 15.41 15.41 0.00 2.74
363 364 2.257207 CCGGTCTATGTCCCATATGGT 58.743 52.381 20.46 4.42 34.77 3.55
364 365 3.437213 CCGGTCTATGTCCCATATGGTA 58.563 50.000 20.46 1.10 34.77 3.25
365 366 3.194968 CCGGTCTATGTCCCATATGGTAC 59.805 52.174 20.46 15.50 34.77 3.34
366 367 4.087182 CGGTCTATGTCCCATATGGTACT 58.913 47.826 20.46 7.65 34.77 2.73
367 368 4.158025 CGGTCTATGTCCCATATGGTACTC 59.842 50.000 20.46 8.11 34.77 2.59
368 369 5.334421 GGTCTATGTCCCATATGGTACTCT 58.666 45.833 20.46 9.22 34.77 3.24
369 370 5.780793 GGTCTATGTCCCATATGGTACTCTT 59.219 44.000 20.46 7.10 34.77 2.85
370 371 6.071278 GGTCTATGTCCCATATGGTACTCTTC 60.071 46.154 20.46 6.40 34.77 2.87
371 372 6.017192 TCTATGTCCCATATGGTACTCTTCC 58.983 44.000 20.46 0.10 34.77 3.46
372 373 4.280789 TGTCCCATATGGTACTCTTCCT 57.719 45.455 20.46 0.00 34.77 3.36
373 374 4.631234 TGTCCCATATGGTACTCTTCCTT 58.369 43.478 20.46 0.00 34.77 3.36
374 375 4.408921 TGTCCCATATGGTACTCTTCCTTG 59.591 45.833 20.46 0.68 34.77 3.61
375 376 3.391296 TCCCATATGGTACTCTTCCTTGC 59.609 47.826 20.46 0.00 34.77 4.01
376 377 3.392616 CCCATATGGTACTCTTCCTTGCT 59.607 47.826 20.46 0.00 0.00 3.91
377 378 4.384056 CCATATGGTACTCTTCCTTGCTG 58.616 47.826 14.09 0.00 0.00 4.41
378 379 4.384056 CATATGGTACTCTTCCTTGCTGG 58.616 47.826 0.00 0.00 37.10 4.85
379 380 2.024176 TGGTACTCTTCCTTGCTGGA 57.976 50.000 0.00 0.00 44.51 3.86
397 398 3.890674 GGCCGCACCTTTACTCTG 58.109 61.111 0.00 0.00 34.51 3.35
398 399 1.745489 GGCCGCACCTTTACTCTGG 60.745 63.158 0.00 0.00 34.51 3.86
399 400 1.745489 GCCGCACCTTTACTCTGGG 60.745 63.158 0.00 0.00 0.00 4.45
400 401 1.980052 CCGCACCTTTACTCTGGGA 59.020 57.895 0.00 0.00 0.00 4.37
401 402 0.323629 CCGCACCTTTACTCTGGGAA 59.676 55.000 0.00 0.00 0.00 3.97
402 403 1.676014 CCGCACCTTTACTCTGGGAAG 60.676 57.143 0.00 0.00 0.00 3.46
403 404 1.454201 GCACCTTTACTCTGGGAAGC 58.546 55.000 0.00 0.00 0.00 3.86
404 405 1.003696 GCACCTTTACTCTGGGAAGCT 59.996 52.381 0.00 0.00 0.00 3.74
405 406 2.937433 GCACCTTTACTCTGGGAAGCTC 60.937 54.545 0.00 0.00 0.00 4.09
406 407 2.303022 CACCTTTACTCTGGGAAGCTCA 59.697 50.000 0.00 0.00 0.00 4.26
407 408 2.569404 ACCTTTACTCTGGGAAGCTCAG 59.431 50.000 0.00 0.00 0.00 3.35
408 409 2.626840 CTTTACTCTGGGAAGCTCAGC 58.373 52.381 0.00 0.00 32.63 4.26
409 410 0.532573 TTACTCTGGGAAGCTCAGCG 59.467 55.000 0.00 0.00 32.63 5.18
410 411 1.323271 TACTCTGGGAAGCTCAGCGG 61.323 60.000 0.00 0.00 32.63 5.52
411 412 3.382803 CTCTGGGAAGCTCAGCGGG 62.383 68.421 0.00 0.00 32.63 6.13
429 430 4.873129 CCGCCGGACATGGAGACG 62.873 72.222 5.05 0.00 0.00 4.18
430 431 4.129737 CGCCGGACATGGAGACGT 62.130 66.667 5.05 0.00 0.00 4.34
431 432 2.767445 CGCCGGACATGGAGACGTA 61.767 63.158 5.05 0.00 0.00 3.57
432 433 1.226888 GCCGGACATGGAGACGTAC 60.227 63.158 5.05 0.00 0.00 3.67
433 434 1.063649 CCGGACATGGAGACGTACG 59.936 63.158 15.01 15.01 0.00 3.67
434 435 1.371337 CCGGACATGGAGACGTACGA 61.371 60.000 24.41 0.00 0.00 3.43
435 436 0.027716 CGGACATGGAGACGTACGAG 59.972 60.000 24.41 4.92 0.00 4.18
436 437 0.248539 GGACATGGAGACGTACGAGC 60.249 60.000 24.41 13.35 0.00 5.03
437 438 0.589229 GACATGGAGACGTACGAGCG 60.589 60.000 24.41 5.25 37.94 5.03
438 439 1.939785 CATGGAGACGTACGAGCGC 60.940 63.158 24.41 14.45 34.88 5.92
439 440 3.122250 ATGGAGACGTACGAGCGCC 62.122 63.158 24.41 22.45 34.88 6.53
440 441 4.883300 GGAGACGTACGAGCGCCG 62.883 72.222 24.41 15.25 45.44 6.46
441 442 4.883300 GAGACGTACGAGCGCCGG 62.883 72.222 24.41 0.00 43.93 6.13
455 456 1.779569 CGCCGGCGAAGATTTATACT 58.220 50.000 44.86 0.00 42.83 2.12
456 457 2.937591 CGCCGGCGAAGATTTATACTA 58.062 47.619 44.86 0.00 42.83 1.82
457 458 2.915463 CGCCGGCGAAGATTTATACTAG 59.085 50.000 44.86 7.86 42.83 2.57
458 459 3.251571 GCCGGCGAAGATTTATACTAGG 58.748 50.000 12.58 0.00 0.00 3.02
459 460 3.305881 GCCGGCGAAGATTTATACTAGGT 60.306 47.826 12.58 0.00 0.00 3.08
460 461 4.798593 GCCGGCGAAGATTTATACTAGGTT 60.799 45.833 12.58 0.00 0.00 3.50
461 462 5.295152 CCGGCGAAGATTTATACTAGGTTT 58.705 41.667 9.30 0.00 0.00 3.27
462 463 5.756833 CCGGCGAAGATTTATACTAGGTTTT 59.243 40.000 9.30 0.00 0.00 2.43
463 464 6.925165 CCGGCGAAGATTTATACTAGGTTTTA 59.075 38.462 9.30 0.00 0.00 1.52
464 465 7.095899 CCGGCGAAGATTTATACTAGGTTTTAC 60.096 40.741 9.30 0.00 0.00 2.01
465 466 7.436080 CGGCGAAGATTTATACTAGGTTTTACA 59.564 37.037 0.00 0.00 0.00 2.41
466 467 9.269453 GGCGAAGATTTATACTAGGTTTTACAT 57.731 33.333 0.00 0.00 0.00 2.29
478 479 8.567285 ACTAGGTTTTACATGAGAAGGATTTG 57.433 34.615 0.00 0.00 0.00 2.32
479 480 6.840780 AGGTTTTACATGAGAAGGATTTGG 57.159 37.500 0.00 0.00 0.00 3.28
480 481 6.314917 AGGTTTTACATGAGAAGGATTTGGT 58.685 36.000 0.00 0.00 0.00 3.67
481 482 7.466804 AGGTTTTACATGAGAAGGATTTGGTA 58.533 34.615 0.00 0.00 0.00 3.25
482 483 7.947890 AGGTTTTACATGAGAAGGATTTGGTAA 59.052 33.333 0.00 0.00 0.00 2.85
483 484 8.027189 GGTTTTACATGAGAAGGATTTGGTAAC 58.973 37.037 0.00 0.00 0.00 2.50
500 501 5.622770 GGTAACAAGGTATTCAGTTGTGG 57.377 43.478 0.00 0.00 34.64 4.17
501 502 5.310451 GGTAACAAGGTATTCAGTTGTGGA 58.690 41.667 0.00 0.00 34.64 4.02
502 503 5.766174 GGTAACAAGGTATTCAGTTGTGGAA 59.234 40.000 0.00 0.00 34.64 3.53
503 504 6.072673 GGTAACAAGGTATTCAGTTGTGGAAG 60.073 42.308 0.00 0.00 34.64 3.46
504 505 5.304686 ACAAGGTATTCAGTTGTGGAAGA 57.695 39.130 0.00 0.00 33.16 2.87
505 506 5.880901 ACAAGGTATTCAGTTGTGGAAGAT 58.119 37.500 0.00 0.00 33.16 2.40
506 507 5.707298 ACAAGGTATTCAGTTGTGGAAGATG 59.293 40.000 0.00 0.00 33.16 2.90
507 508 5.762179 AGGTATTCAGTTGTGGAAGATGA 57.238 39.130 0.00 0.00 0.00 2.92
508 509 5.491982 AGGTATTCAGTTGTGGAAGATGAC 58.508 41.667 0.00 0.00 0.00 3.06
509 510 5.013079 AGGTATTCAGTTGTGGAAGATGACA 59.987 40.000 0.00 0.00 0.00 3.58
510 511 5.882557 GGTATTCAGTTGTGGAAGATGACAT 59.117 40.000 0.00 0.00 0.00 3.06
511 512 6.375455 GGTATTCAGTTGTGGAAGATGACATT 59.625 38.462 0.00 0.00 0.00 2.71
512 513 6.906157 ATTCAGTTGTGGAAGATGACATTT 57.094 33.333 0.00 0.00 0.00 2.32
513 514 8.946085 GTATTCAGTTGTGGAAGATGACATTTA 58.054 33.333 0.00 0.00 0.00 1.40
514 515 7.815840 TTCAGTTGTGGAAGATGACATTTAA 57.184 32.000 0.00 0.00 0.00 1.52
515 516 7.439157 TCAGTTGTGGAAGATGACATTTAAG 57.561 36.000 0.00 0.00 0.00 1.85
516 517 7.223584 TCAGTTGTGGAAGATGACATTTAAGA 58.776 34.615 0.00 0.00 0.00 2.10
517 518 7.884877 TCAGTTGTGGAAGATGACATTTAAGAT 59.115 33.333 0.00 0.00 0.00 2.40
518 519 7.966753 CAGTTGTGGAAGATGACATTTAAGATG 59.033 37.037 0.00 0.00 0.00 2.90
519 520 7.667219 AGTTGTGGAAGATGACATTTAAGATGT 59.333 33.333 0.00 3.81 34.52 3.06
520 521 7.381766 TGTGGAAGATGACATTTAAGATGTG 57.618 36.000 7.66 0.00 31.52 3.21
521 522 7.167535 TGTGGAAGATGACATTTAAGATGTGA 58.832 34.615 7.66 1.70 31.52 3.58
522 523 7.119699 TGTGGAAGATGACATTTAAGATGTGAC 59.880 37.037 7.66 0.00 31.52 3.67
523 524 6.599244 TGGAAGATGACATTTAAGATGTGACC 59.401 38.462 7.66 0.00 31.52 4.02
524 525 6.238211 GGAAGATGACATTTAAGATGTGACCG 60.238 42.308 7.66 0.00 31.52 4.79
525 526 5.977635 AGATGACATTTAAGATGTGACCGA 58.022 37.500 7.66 0.00 31.52 4.69
526 527 6.586344 AGATGACATTTAAGATGTGACCGAT 58.414 36.000 7.66 0.00 31.52 4.18
527 528 6.703607 AGATGACATTTAAGATGTGACCGATC 59.296 38.462 7.66 0.00 31.52 3.69
528 529 5.729510 TGACATTTAAGATGTGACCGATCA 58.270 37.500 7.66 0.00 31.52 2.92
538 539 0.536724 TGACCGATCACTGTCCATGG 59.463 55.000 4.97 4.97 30.96 3.66
539 540 0.824109 GACCGATCACTGTCCATGGA 59.176 55.000 11.44 11.44 0.00 3.41
540 541 0.537188 ACCGATCACTGTCCATGGAC 59.463 55.000 33.97 33.97 44.77 4.02
549 550 2.523440 GTCCATGGACATACCCGGA 58.477 57.895 35.21 0.00 44.02 5.14
550 551 0.106149 GTCCATGGACATACCCGGAC 59.894 60.000 35.21 8.51 46.01 4.79
551 552 1.069090 CCATGGACATACCCGGACG 59.931 63.158 5.56 0.00 38.00 4.79
552 553 1.594293 CATGGACATACCCGGACGC 60.594 63.158 0.73 0.00 38.00 5.19
553 554 2.061578 ATGGACATACCCGGACGCA 61.062 57.895 0.73 0.00 38.00 5.24
554 555 1.407656 ATGGACATACCCGGACGCAT 61.408 55.000 0.73 0.00 38.00 4.73
555 556 1.145377 GGACATACCCGGACGCATT 59.855 57.895 0.73 0.00 0.00 3.56
556 557 0.878961 GGACATACCCGGACGCATTC 60.879 60.000 0.73 0.00 0.00 2.67
557 558 1.213094 GACATACCCGGACGCATTCG 61.213 60.000 0.73 0.00 42.43 3.34
558 559 2.279918 ATACCCGGACGCATTCGC 60.280 61.111 0.73 0.00 39.84 4.70
568 569 4.810278 GCATTCGCGAACGTTTGA 57.190 50.000 26.00 7.20 41.18 2.69
569 570 2.613971 GCATTCGCGAACGTTTGAG 58.386 52.632 26.00 16.14 41.18 3.02
570 571 0.162933 GCATTCGCGAACGTTTGAGA 59.837 50.000 26.00 18.32 41.18 3.27
571 572 1.397945 GCATTCGCGAACGTTTGAGAA 60.398 47.619 29.18 29.18 41.18 2.87
572 573 2.724839 GCATTCGCGAACGTTTGAGAAT 60.725 45.455 30.50 30.50 40.34 2.40
573 574 2.848562 TTCGCGAACGTTTGAGAATC 57.151 45.000 25.22 5.50 41.18 2.52
574 575 1.065358 TCGCGAACGTTTGAGAATCC 58.935 50.000 19.90 0.00 41.18 3.01
575 576 0.246757 CGCGAACGTTTGAGAATCCG 60.247 55.000 19.90 8.48 33.53 4.18
576 577 0.094730 GCGAACGTTTGAGAATCCGG 59.905 55.000 19.90 0.00 0.00 5.14
577 578 1.705256 CGAACGTTTGAGAATCCGGA 58.295 50.000 6.61 6.61 0.00 5.14
578 579 2.268298 CGAACGTTTGAGAATCCGGAT 58.732 47.619 12.38 12.38 0.00 4.18
579 580 2.671396 CGAACGTTTGAGAATCCGGATT 59.329 45.455 29.60 29.60 0.00 3.01
580 581 3.861113 CGAACGTTTGAGAATCCGGATTA 59.139 43.478 29.28 11.94 0.00 1.75
581 582 4.026804 CGAACGTTTGAGAATCCGGATTAG 60.027 45.833 29.28 15.75 0.00 1.73
582 583 3.195661 ACGTTTGAGAATCCGGATTAGC 58.804 45.455 29.28 22.50 0.00 3.09
583 584 3.118738 ACGTTTGAGAATCCGGATTAGCT 60.119 43.478 29.28 22.19 0.00 3.32
584 585 4.098960 ACGTTTGAGAATCCGGATTAGCTA 59.901 41.667 29.28 17.20 0.00 3.32
585 586 5.221461 ACGTTTGAGAATCCGGATTAGCTAT 60.221 40.000 29.28 13.03 0.00 2.97
586 587 6.015688 ACGTTTGAGAATCCGGATTAGCTATA 60.016 38.462 29.28 12.64 0.00 1.31
587 588 7.036220 CGTTTGAGAATCCGGATTAGCTATAT 58.964 38.462 29.28 5.04 0.00 0.86
588 589 7.009631 CGTTTGAGAATCCGGATTAGCTATATG 59.990 40.741 29.28 14.20 0.00 1.78
589 590 7.482169 TTGAGAATCCGGATTAGCTATATGT 57.518 36.000 29.28 3.56 0.00 2.29
590 591 8.589701 TTGAGAATCCGGATTAGCTATATGTA 57.410 34.615 29.28 4.44 0.00 2.29
591 592 8.589701 TGAGAATCCGGATTAGCTATATGTAA 57.410 34.615 29.28 3.77 0.00 2.41
592 593 8.467598 TGAGAATCCGGATTAGCTATATGTAAC 58.532 37.037 29.28 12.05 0.00 2.50
593 594 8.596781 AGAATCCGGATTAGCTATATGTAACT 57.403 34.615 29.28 14.09 0.00 2.24
594 595 9.696572 AGAATCCGGATTAGCTATATGTAACTA 57.303 33.333 29.28 0.00 0.00 2.24
611 612 6.982852 TGTAACTATAGATGCTCTTAGGTGC 58.017 40.000 6.78 0.00 0.00 5.01
612 613 6.549736 TGTAACTATAGATGCTCTTAGGTGCA 59.450 38.462 6.78 3.95 44.34 4.57
613 614 6.485830 AACTATAGATGCTCTTAGGTGCAA 57.514 37.500 6.78 0.00 43.62 4.08
614 615 6.485830 ACTATAGATGCTCTTAGGTGCAAA 57.514 37.500 6.78 0.00 43.62 3.68
615 616 6.889198 ACTATAGATGCTCTTAGGTGCAAAA 58.111 36.000 6.78 0.00 43.62 2.44
616 617 7.512992 ACTATAGATGCTCTTAGGTGCAAAAT 58.487 34.615 6.78 3.23 43.62 1.82
617 618 7.995488 ACTATAGATGCTCTTAGGTGCAAAATT 59.005 33.333 6.78 0.00 43.62 1.82
618 619 9.494271 CTATAGATGCTCTTAGGTGCAAAATTA 57.506 33.333 5.65 0.00 43.62 1.40
619 620 6.442513 AGATGCTCTTAGGTGCAAAATTAC 57.557 37.500 5.65 0.00 43.62 1.89
620 621 4.678509 TGCTCTTAGGTGCAAAATTACG 57.321 40.909 0.00 0.00 38.72 3.18
621 622 4.069304 TGCTCTTAGGTGCAAAATTACGT 58.931 39.130 0.00 0.00 38.72 3.57
622 623 5.239351 TGCTCTTAGGTGCAAAATTACGTA 58.761 37.500 0.00 0.00 38.72 3.57
623 624 5.878116 TGCTCTTAGGTGCAAAATTACGTAT 59.122 36.000 0.00 0.00 38.72 3.06
624 625 7.042950 TGCTCTTAGGTGCAAAATTACGTATA 58.957 34.615 0.00 0.00 38.72 1.47
625 626 7.223971 TGCTCTTAGGTGCAAAATTACGTATAG 59.776 37.037 0.00 0.00 38.72 1.31
626 627 7.224167 GCTCTTAGGTGCAAAATTACGTATAGT 59.776 37.037 0.00 0.00 32.83 2.12
627 628 9.095065 CTCTTAGGTGCAAAATTACGTATAGTT 57.905 33.333 0.00 0.00 0.00 2.24
633 634 9.991388 GGTGCAAAATTACGTATAGTTGAAATA 57.009 29.630 13.70 0.00 0.00 1.40
661 662 0.667184 GGAAAGCAAATGTGGCGTGG 60.667 55.000 0.00 0.00 36.08 4.94
676 677 4.347096 TGGTACACGCTTTCCACG 57.653 55.556 0.00 0.00 0.00 4.94
700 701 1.541379 AATGCTCCGGTTAAACACCC 58.459 50.000 0.00 0.00 43.83 4.61
701 702 0.402504 ATGCTCCGGTTAAACACCCA 59.597 50.000 0.00 0.00 43.83 4.51
702 703 0.250553 TGCTCCGGTTAAACACCCAG 60.251 55.000 0.00 0.00 43.83 4.45
703 704 0.958876 GCTCCGGTTAAACACCCAGG 60.959 60.000 0.00 0.00 43.83 4.45
704 705 0.958876 CTCCGGTTAAACACCCAGGC 60.959 60.000 0.00 0.00 43.83 4.85
705 706 1.228306 CCGGTTAAACACCCAGGCA 60.228 57.895 0.00 0.00 43.83 4.75
706 707 1.520600 CCGGTTAAACACCCAGGCAC 61.521 60.000 0.00 0.00 43.83 5.01
707 708 0.820074 CGGTTAAACACCCAGGCACA 60.820 55.000 0.00 0.00 43.83 4.57
708 709 0.671796 GGTTAAACACCCAGGCACAC 59.328 55.000 0.00 0.00 40.19 3.82
709 710 1.394618 GTTAAACACCCAGGCACACA 58.605 50.000 0.00 0.00 0.00 3.72
710 711 1.751924 GTTAAACACCCAGGCACACAA 59.248 47.619 0.00 0.00 0.00 3.33
711 712 1.394618 TAAACACCCAGGCACACAAC 58.605 50.000 0.00 0.00 0.00 3.32
712 713 1.326951 AAACACCCAGGCACACAACC 61.327 55.000 0.00 0.00 0.00 3.77
729 730 1.216178 CCCCGAATGGCAAAGCTTG 59.784 57.895 0.00 0.00 0.00 4.01
753 754 0.099791 CGCACGTCCAACCAAAAACT 59.900 50.000 0.00 0.00 0.00 2.66
943 953 1.210967 TGTCCACGTTCCTTCCACTTT 59.789 47.619 0.00 0.00 0.00 2.66
971 994 0.842467 CTCCCCTGTTTCACCCCTCT 60.842 60.000 0.00 0.00 0.00 3.69
976 999 1.425448 CCTGTTTCACCCCTCTCCTTT 59.575 52.381 0.00 0.00 0.00 3.11
995 1018 3.477224 CTCTGCTCCGCTAGACCGC 62.477 68.421 0.00 0.00 0.00 5.68
1396 1431 1.093159 GCTTGATCTGCTCAGGGTTG 58.907 55.000 0.00 0.00 34.68 3.77
1408 1443 2.992997 CTCAGGGTTGAGCTTTAGCGAG 60.993 54.545 0.00 0.00 43.98 5.03
1416 1451 5.452777 GTTGAGCTTTAGCGAGTTCAATTT 58.547 37.500 15.70 0.00 44.77 1.82
1469 1504 4.091939 AGGTTTAGGTCCCCGCGC 62.092 66.667 0.00 0.00 0.00 6.86
1538 1573 4.857588 GTGATCTTTGTGTGTACGGTAGAG 59.142 45.833 0.00 0.00 0.00 2.43
1547 1582 0.109412 GTACGGTAGAGTTGCGTGCT 60.109 55.000 0.00 0.00 0.00 4.40
1548 1583 0.109458 TACGGTAGAGTTGCGTGCTG 60.109 55.000 0.00 0.00 0.00 4.41
1560 1595 1.133253 CGTGCTGCGATGAACCTTG 59.867 57.895 0.00 0.00 44.77 3.61
1563 1598 0.321346 TGCTGCGATGAACCTTGAGA 59.679 50.000 0.00 0.00 0.00 3.27
1566 1601 2.208431 CTGCGATGAACCTTGAGATCC 58.792 52.381 0.00 0.00 0.00 3.36
1602 1637 1.194772 GTTTGAGGCTTGTACGCTCAC 59.805 52.381 0.00 0.00 0.00 3.51
1603 1638 0.391228 TTGAGGCTTGTACGCTCACA 59.609 50.000 0.00 0.00 0.00 3.58
1610 1645 3.512680 GCTTGTACGCTCACAGACTATT 58.487 45.455 0.00 0.00 0.00 1.73
1623 1658 7.468084 GCTCACAGACTATTATCTTTCGAGAGT 60.468 40.741 2.53 0.00 0.00 3.24
1629 1664 8.354426 AGACTATTATCTTTCGAGAGTTTAGGC 58.646 37.037 2.53 3.19 0.00 3.93
1656 1691 3.429085 CGCCTAGTGTTTGATGAAATGC 58.571 45.455 0.00 0.00 0.00 3.56
1660 1695 5.300286 GCCTAGTGTTTGATGAAATGCCTAT 59.700 40.000 0.00 0.00 0.00 2.57
1671 1706 6.772716 TGATGAAATGCCTATTCTAAACTCCC 59.227 38.462 0.00 0.00 0.00 4.30
1711 1764 1.359848 CGTGCCTCGCTGAACTTAAT 58.640 50.000 0.00 0.00 0.00 1.40
1719 1772 4.201724 CCTCGCTGAACTTAATGTTAGCAC 60.202 45.833 0.00 0.00 39.30 4.40
1724 1777 5.562696 GCTGAACTTAATGTTAGCACAAGCA 60.563 40.000 0.00 0.00 40.48 3.91
1748 1801 0.163788 CTGTTTGAGGCTTGTACGCG 59.836 55.000 3.53 3.53 0.00 6.01
1775 1828 2.092148 CGCGTTTCGAGAGTTGCG 59.908 61.111 0.00 3.39 41.67 4.85
1823 1876 1.115930 ACTGTGGGAGTGAGCGACTT 61.116 55.000 0.00 0.00 33.83 3.01
1829 1882 1.480954 GGGAGTGAGCGACTTTGGATA 59.519 52.381 0.00 0.00 33.83 2.59
1848 1901 5.047872 TGGATACTTACACATGTGTACACGT 60.048 40.000 33.03 28.52 44.81 4.49
1869 1922 5.163992 ACGTGATTATTAACTGTTGCAGTCG 60.164 40.000 2.69 1.80 44.62 4.18
1923 1976 5.177327 AGTGAAATTTTGTATTGCCTTTGCG 59.823 36.000 0.00 0.00 41.78 4.85
1975 2032 1.200716 TGTGCTTATGCTGCTTTCTGC 59.799 47.619 0.00 0.00 40.48 4.26
1996 2053 3.688159 GCTGCAAACCAGGGCCAG 61.688 66.667 6.18 0.00 42.03 4.85
1997 2054 2.203538 CTGCAAACCAGGGCCAGT 60.204 61.111 6.18 0.00 37.93 4.00
2003 2060 3.103213 ACCAGGGCCAGTGTGGTT 61.103 61.111 9.28 0.00 42.10 3.67
2013 2070 3.575965 CCAGTGTGGTTAAATGGCTTC 57.424 47.619 0.00 0.00 31.35 3.86
2035 2103 2.905075 TGACTGAAGGGTTATGATGCG 58.095 47.619 0.00 0.00 0.00 4.73
2063 2131 3.242543 GCTCACAAGTCACAAGTCACAAG 60.243 47.826 0.00 0.00 0.00 3.16
2064 2132 3.935203 CTCACAAGTCACAAGTCACAAGT 59.065 43.478 0.00 0.00 0.00 3.16
2065 2133 3.932710 TCACAAGTCACAAGTCACAAGTC 59.067 43.478 0.00 0.00 0.00 3.01
2066 2134 3.684305 CACAAGTCACAAGTCACAAGTCA 59.316 43.478 0.00 0.00 0.00 3.41
2067 2135 3.684788 ACAAGTCACAAGTCACAAGTCAC 59.315 43.478 0.00 0.00 0.00 3.67
2068 2136 3.610040 AGTCACAAGTCACAAGTCACA 57.390 42.857 0.00 0.00 0.00 3.58
2069 2137 3.937814 AGTCACAAGTCACAAGTCACAA 58.062 40.909 0.00 0.00 0.00 3.33
2079 2147 7.435068 AGTCACAAGTCACAAATAATACCAC 57.565 36.000 0.00 0.00 0.00 4.16
2083 2151 8.855110 TCACAAGTCACAAATAATACCACAATT 58.145 29.630 0.00 0.00 0.00 2.32
2105 2173 9.271828 CAATTTTAAAGCCATAAAAAGTGACCT 57.728 29.630 7.97 0.00 39.33 3.85
2222 2316 1.421646 CCCTTGGAGAGAACAACACCT 59.578 52.381 0.00 0.00 0.00 4.00
2223 2317 2.498167 CCTTGGAGAGAACAACACCTG 58.502 52.381 0.00 0.00 0.00 4.00
2387 2488 6.016024 TGTCATCCCATAATATTTTCTGCAGC 60.016 38.462 9.47 0.00 0.00 5.25
2402 2503 1.355066 GCAGCGAAGTCGAAAGGGAG 61.355 60.000 4.59 0.00 43.02 4.30
2528 2629 8.579863 GGAGTACTGGTGAGTAGTTAGTAAAAA 58.420 37.037 0.00 0.00 38.29 1.94
2725 2866 5.396057 AGGGTGGGTTATGCATATTGTTA 57.604 39.130 7.36 0.00 0.00 2.41
2726 2867 5.385198 AGGGTGGGTTATGCATATTGTTAG 58.615 41.667 7.36 0.00 0.00 2.34
2753 2894 6.249951 ACTGTAAGGCTCCCTAGTGATATAG 58.750 44.000 0.00 0.00 39.30 1.31
2754 2895 6.183361 ACTGTAAGGCTCCCTAGTGATATAGT 60.183 42.308 0.00 0.00 39.30 2.12
2755 2896 7.018349 ACTGTAAGGCTCCCTAGTGATATAGTA 59.982 40.741 0.00 0.00 39.30 1.82
2756 2897 7.403671 TGTAAGGCTCCCTAGTGATATAGTAG 58.596 42.308 0.00 0.00 31.13 2.57
2757 2898 6.471942 AAGGCTCCCTAGTGATATAGTAGT 57.528 41.667 0.00 0.00 31.13 2.73
2758 2899 7.585884 AAGGCTCCCTAGTGATATAGTAGTA 57.414 40.000 0.00 0.00 31.13 1.82
2778 2919 8.251721 AGTAGTACCATAGTGATCTGTTTGAAC 58.748 37.037 0.00 0.00 0.00 3.18
2792 2933 1.698506 TTGAACGACCAAAAGGGCAT 58.301 45.000 0.00 0.00 42.05 4.40
2794 2935 1.339610 TGAACGACCAAAAGGGCATTG 59.660 47.619 0.00 0.00 42.05 2.82
2822 2963 5.704515 ACTTGAGATGTCTGAAAATGGACTG 59.295 40.000 0.00 0.00 34.01 3.51
2830 2971 4.757149 GTCTGAAAATGGACTGTACAGCTT 59.243 41.667 22.90 4.01 0.00 3.74
2836 2977 7.446931 TGAAAATGGACTGTACAGCTTAATTGA 59.553 33.333 22.90 3.21 0.00 2.57
2929 3073 9.239002 GACTATAAGCGTTATGATATGACCATC 57.761 37.037 0.00 0.00 0.00 3.51
2947 3091 4.758674 ACCATCTGAACAGTTCAACATCAG 59.241 41.667 16.85 10.29 39.58 2.90
2962 3106 4.900635 ACATCAGTCAACCTTTTCACAC 57.099 40.909 0.00 0.00 0.00 3.82
3058 3272 7.718272 ACAAAATCCTGATGTGAAATGTTTG 57.282 32.000 0.00 0.00 0.00 2.93
3063 3277 3.737266 CCTGATGTGAAATGTTTGTGCAC 59.263 43.478 10.75 10.75 0.00 4.57
3070 3284 0.248990 AATGTTTGTGCACACCGCTG 60.249 50.000 21.56 0.00 43.06 5.18
3121 3335 9.581099 CTTCTGTTGGTACTTGTAAAATGTTTT 57.419 29.630 0.00 0.00 0.00 2.43
3122 3336 9.930693 TTCTGTTGGTACTTGTAAAATGTTTTT 57.069 25.926 0.00 0.00 0.00 1.94
3138 3352 6.826893 ATGTTTTTGTGCATGTGTTTCTAC 57.173 33.333 0.00 0.00 0.00 2.59
3158 3372 2.029828 ACTTACTGCCACTCTCTTGACG 60.030 50.000 0.00 0.00 0.00 4.35
3159 3373 1.905637 TACTGCCACTCTCTTGACGA 58.094 50.000 0.00 0.00 0.00 4.20
3160 3374 0.315568 ACTGCCACTCTCTTGACGAC 59.684 55.000 0.00 0.00 0.00 4.34
3161 3375 0.600557 CTGCCACTCTCTTGACGACT 59.399 55.000 0.00 0.00 0.00 4.18
3264 3479 1.827344 TGAAGACGAGGATGATGCTGT 59.173 47.619 0.00 0.00 0.00 4.40
3268 3483 4.471904 AGACGAGGATGATGCTGTAAAA 57.528 40.909 0.00 0.00 0.00 1.52
3340 3555 4.927978 GCTAGAGGCTTCATCAGTAAGA 57.072 45.455 0.00 0.00 38.06 2.10
3362 3577 0.179094 AACAAGCGACACGACCTTCA 60.179 50.000 0.00 0.00 0.00 3.02
3373 3588 5.416271 ACACGACCTTCATAAGTACCATT 57.584 39.130 0.00 0.00 0.00 3.16
3407 3622 4.280929 CGACTGATCATACCCATCCTTGTA 59.719 45.833 0.00 0.00 0.00 2.41
3548 3766 4.410228 TGGAAGACTAGGATCTTTGGGATG 59.590 45.833 0.00 0.00 39.08 3.51
3585 3807 7.798596 ATGTCAATTGTATTCTTCTAGCTGG 57.201 36.000 5.13 0.00 0.00 4.85
3824 4049 9.694137 ATAAGATTCTTAAGTTACTATGCCGTC 57.306 33.333 10.07 0.00 0.00 4.79
3838 4063 3.436700 TGCCGTCAGATAGTGTGTATG 57.563 47.619 0.00 0.00 0.00 2.39
3862 4100 7.366513 TGATCTTAAGATTATCTCAGTCGCTG 58.633 38.462 18.88 1.02 34.37 5.18
3897 4310 5.178797 GTTTGCTTCTCAGTTATAGCCAGA 58.821 41.667 0.00 0.00 32.73 3.86
3926 4339 1.606737 GGGTCAAGTCTGTCTGACAGC 60.607 57.143 28.56 22.90 45.54 4.40
3942 4355 5.356751 TCTGACAGCAAACACAAAACATAGT 59.643 36.000 0.00 0.00 0.00 2.12
4025 4441 7.195374 ACAGCAACTGGATCCTAAGTTATTA 57.805 36.000 15.22 0.00 34.90 0.98
4026 4442 7.806180 ACAGCAACTGGATCCTAAGTTATTAT 58.194 34.615 15.22 2.44 34.90 1.28
4027 4443 7.716998 ACAGCAACTGGATCCTAAGTTATTATG 59.283 37.037 15.22 13.27 34.90 1.90
4043 4459 8.830201 AGTTATTATGATCTTCTCAGTCATGC 57.170 34.615 0.00 0.00 37.28 4.06
4046 4462 1.827344 TGATCTTCTCAGTCATGCCGT 59.173 47.619 0.00 0.00 0.00 5.68
4067 4483 0.997196 GCACCGAGGAATAACACGAC 59.003 55.000 0.00 0.00 0.00 4.34
4068 4484 1.265568 CACCGAGGAATAACACGACG 58.734 55.000 0.00 0.00 0.00 5.12
4070 4486 0.179145 CCGAGGAATAACACGACGCT 60.179 55.000 0.00 0.00 0.00 5.07
4073 4489 2.410730 CGAGGAATAACACGACGCTTTT 59.589 45.455 0.00 0.00 0.00 2.27
4096 4516 3.410850 CAGTCTTTTTGATCATGCGACG 58.589 45.455 0.00 0.00 0.00 5.12
4118 4538 6.846350 ACGAGCTCCAAATTAAAGAATCTTG 58.154 36.000 8.47 0.00 0.00 3.02
4126 4546 9.590451 TCCAAATTAAAGAATCTTGCATGAATC 57.410 29.630 6.36 7.91 0.00 2.52
4127 4547 9.373603 CCAAATTAAAGAATCTTGCATGAATCA 57.626 29.630 17.23 0.44 0.00 2.57
4139 4559 4.251543 GCATGAATCAATGCCATCATCA 57.748 40.909 0.00 0.00 45.93 3.07
4140 4560 3.987868 GCATGAATCAATGCCATCATCAC 59.012 43.478 0.00 0.00 45.93 3.06
4141 4561 4.556233 CATGAATCAATGCCATCATCACC 58.444 43.478 0.00 0.00 30.39 4.02
4142 4562 3.633418 TGAATCAATGCCATCATCACCA 58.367 40.909 0.00 0.00 31.27 4.17
4143 4563 3.382227 TGAATCAATGCCATCATCACCAC 59.618 43.478 0.00 0.00 31.27 4.16
4144 4564 2.510928 TCAATGCCATCATCACCACA 57.489 45.000 0.00 0.00 31.27 4.17
4145 4565 2.371306 TCAATGCCATCATCACCACAG 58.629 47.619 0.00 0.00 31.27 3.66
4146 4566 2.097036 CAATGCCATCATCACCACAGT 58.903 47.619 0.00 0.00 31.27 3.55
4147 4567 2.494471 CAATGCCATCATCACCACAGTT 59.506 45.455 0.00 0.00 31.27 3.16
4148 4568 3.650281 ATGCCATCATCACCACAGTTA 57.350 42.857 0.00 0.00 0.00 2.24
4152 4572 3.505680 GCCATCATCACCACAGTTACAAA 59.494 43.478 0.00 0.00 0.00 2.83
4153 4573 4.022416 GCCATCATCACCACAGTTACAAAA 60.022 41.667 0.00 0.00 0.00 2.44
4154 4574 5.336690 GCCATCATCACCACAGTTACAAAAT 60.337 40.000 0.00 0.00 0.00 1.82
4156 4576 5.605564 TCATCACCACAGTTACAAAATCG 57.394 39.130 0.00 0.00 0.00 3.34
4157 4577 5.301555 TCATCACCACAGTTACAAAATCGA 58.698 37.500 0.00 0.00 0.00 3.59
4158 4578 5.760743 TCATCACCACAGTTACAAAATCGAA 59.239 36.000 0.00 0.00 0.00 3.71
4159 4579 5.666969 TCACCACAGTTACAAAATCGAAG 57.333 39.130 0.00 0.00 0.00 3.79
4160 4580 5.361427 TCACCACAGTTACAAAATCGAAGA 58.639 37.500 0.00 0.00 45.75 2.87
4162 4582 6.018262 TCACCACAGTTACAAAATCGAAGAAG 60.018 38.462 0.00 0.00 43.58 2.85
4164 4584 6.710744 ACCACAGTTACAAAATCGAAGAAGAT 59.289 34.615 0.00 0.00 43.58 2.40
4165 4585 7.017645 CCACAGTTACAAAATCGAAGAAGATG 58.982 38.462 0.00 0.00 43.58 2.90
4167 4587 8.446273 CACAGTTACAAAATCGAAGAAGATGAT 58.554 33.333 0.00 0.00 43.58 2.45
4168 4588 8.446273 ACAGTTACAAAATCGAAGAAGATGATG 58.554 33.333 0.00 0.00 43.58 3.07
4170 4590 9.388506 AGTTACAAAATCGAAGAAGATGATGAT 57.611 29.630 0.00 0.00 43.58 2.45
4171 4591 9.430838 GTTACAAAATCGAAGAAGATGATGATG 57.569 33.333 0.00 0.00 43.58 3.07
4172 4592 7.854557 ACAAAATCGAAGAAGATGATGATGA 57.145 32.000 0.00 0.00 43.58 2.92
4173 4593 7.917597 ACAAAATCGAAGAAGATGATGATGAG 58.082 34.615 0.00 0.00 43.58 2.90
4178 4598 5.595952 TCGAAGAAGATGATGATGAGGAAGA 59.404 40.000 0.00 0.00 0.00 2.87
4181 4601 7.042590 CGAAGAAGATGATGATGAGGAAGAAAG 60.043 40.741 0.00 0.00 0.00 2.62
4182 4602 7.197901 AGAAGATGATGATGAGGAAGAAAGT 57.802 36.000 0.00 0.00 0.00 2.66
4184 4604 7.769970 AGAAGATGATGATGAGGAAGAAAGTTC 59.230 37.037 0.00 0.00 0.00 3.01
4185 4605 6.955364 AGATGATGATGAGGAAGAAAGTTCA 58.045 36.000 0.00 0.00 0.00 3.18
4197 4621 5.125578 GGAAGAAAGTTCAGGTTCAGTGTTT 59.874 40.000 0.00 0.00 0.00 2.83
4199 4623 3.782889 AAGTTCAGGTTCAGTGTTTGC 57.217 42.857 0.00 0.00 0.00 3.68
4339 4766 4.195334 ATGATGGGCTCCGGCACC 62.195 66.667 0.00 0.00 42.08 5.01
4392 4819 3.402681 CATCTCCACGTGGCCCCT 61.403 66.667 30.25 11.13 34.44 4.79
4503 4930 0.898320 AGCTTGTAGTCCGTCTGCAT 59.102 50.000 0.00 0.00 38.47 3.96
4504 4931 1.134965 AGCTTGTAGTCCGTCTGCATC 60.135 52.381 0.00 0.00 38.47 3.91
4508 4935 0.179108 GTAGTCCGTCTGCATCCACC 60.179 60.000 0.00 0.00 0.00 4.61
4526 4953 0.956633 CCCATTGATTCCGCCATGAG 59.043 55.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.389948 ACGCCATCGAAGAGGTTGTC 60.390 55.000 0.00 0.00 43.63 3.18
1 2 0.670546 CACGCCATCGAAGAGGTTGT 60.671 55.000 0.00 0.00 43.63 3.32
2 3 0.670546 ACACGCCATCGAAGAGGTTG 60.671 55.000 0.00 0.00 43.63 3.77
3 4 0.389948 GACACGCCATCGAAGAGGTT 60.390 55.000 0.00 0.00 43.63 3.50
5 6 0.389817 TTGACACGCCATCGAAGAGG 60.390 55.000 0.00 0.00 43.63 3.69
6 7 0.716108 GTTGACACGCCATCGAAGAG 59.284 55.000 0.00 0.00 43.63 2.85
7 8 0.669318 GGTTGACACGCCATCGAAGA 60.669 55.000 0.00 0.00 45.75 2.87
8 9 1.635663 GGGTTGACACGCCATCGAAG 61.636 60.000 0.00 0.00 39.41 3.79
9 10 1.669760 GGGTTGACACGCCATCGAA 60.670 57.895 0.00 0.00 39.41 3.71
10 11 2.047655 GGGTTGACACGCCATCGA 60.048 61.111 0.00 0.00 39.41 3.59
18 19 4.265056 AGCCCGTGGGGTTGACAC 62.265 66.667 3.18 0.00 46.51 3.67
37 38 1.080298 AACGTTTACCTCCGGCTCG 60.080 57.895 0.00 0.00 0.00 5.03
38 39 1.017701 CCAACGTTTACCTCCGGCTC 61.018 60.000 0.00 0.00 0.00 4.70
39 40 1.004200 CCAACGTTTACCTCCGGCT 60.004 57.895 0.00 0.00 0.00 5.52
40 41 2.683859 GCCAACGTTTACCTCCGGC 61.684 63.158 7.67 7.67 0.00 6.13
41 42 0.675522 ATGCCAACGTTTACCTCCGG 60.676 55.000 0.00 0.00 0.00 5.14
42 43 0.446222 CATGCCAACGTTTACCTCCG 59.554 55.000 0.00 0.00 0.00 4.63
43 44 1.467342 GTCATGCCAACGTTTACCTCC 59.533 52.381 0.00 0.00 0.00 4.30
44 45 2.415512 GAGTCATGCCAACGTTTACCTC 59.584 50.000 0.00 0.00 0.00 3.85
45 46 2.224426 TGAGTCATGCCAACGTTTACCT 60.224 45.455 0.00 0.00 0.00 3.08
46 47 2.147958 TGAGTCATGCCAACGTTTACC 58.852 47.619 0.00 0.00 0.00 2.85
47 48 3.426159 CCATGAGTCATGCCAACGTTTAC 60.426 47.826 25.08 0.00 40.20 2.01
48 49 2.746904 CCATGAGTCATGCCAACGTTTA 59.253 45.455 25.08 0.00 40.20 2.01
49 50 1.541147 CCATGAGTCATGCCAACGTTT 59.459 47.619 25.08 0.00 40.20 3.60
50 51 1.167851 CCATGAGTCATGCCAACGTT 58.832 50.000 25.08 0.00 40.20 3.99
51 52 1.308069 GCCATGAGTCATGCCAACGT 61.308 55.000 25.08 0.00 40.20 3.99
52 53 1.307355 TGCCATGAGTCATGCCAACG 61.307 55.000 25.08 13.47 40.20 4.10
53 54 0.171903 GTGCCATGAGTCATGCCAAC 59.828 55.000 25.08 17.93 40.20 3.77
54 55 0.038599 AGTGCCATGAGTCATGCCAA 59.961 50.000 25.08 11.21 40.20 4.52
55 56 0.038599 AAGTGCCATGAGTCATGCCA 59.961 50.000 25.08 19.14 40.20 4.92
56 57 1.180029 AAAGTGCCATGAGTCATGCC 58.820 50.000 25.08 16.68 40.20 4.40
57 58 2.602878 CAAAAGTGCCATGAGTCATGC 58.397 47.619 25.08 20.04 40.20 4.06
58 59 2.602878 GCAAAAGTGCCATGAGTCATG 58.397 47.619 23.81 23.81 45.68 3.07
70 71 0.389426 GCTCCATGGCAGCAAAAGTG 60.389 55.000 23.33 0.00 36.82 3.16
71 72 0.828762 TGCTCCATGGCAGCAAAAGT 60.829 50.000 26.65 0.00 44.02 2.66
72 73 1.969085 TGCTCCATGGCAGCAAAAG 59.031 52.632 26.65 11.93 44.02 2.27
73 74 4.194660 TGCTCCATGGCAGCAAAA 57.805 50.000 26.65 11.54 44.02 2.44
90 91 4.284860 TCGCACAGTGAGCACGCT 62.285 61.111 13.12 0.00 37.34 5.07
91 92 3.771491 CTCGCACAGTGAGCACGC 61.771 66.667 13.12 0.00 33.39 5.34
92 93 3.108289 CCTCGCACAGTGAGCACG 61.108 66.667 13.12 0.00 38.67 5.34
93 94 3.418068 GCCTCGCACAGTGAGCAC 61.418 66.667 13.12 0.00 38.67 4.40
94 95 3.871248 CTGCCTCGCACAGTGAGCA 62.871 63.158 13.12 6.30 38.67 4.26
95 96 2.849120 ATCTGCCTCGCACAGTGAGC 62.849 60.000 4.15 2.00 38.67 4.26
96 97 1.082679 CATCTGCCTCGCACAGTGAG 61.083 60.000 4.15 0.00 39.58 3.51
97 98 1.079612 CATCTGCCTCGCACAGTGA 60.080 57.895 4.15 0.00 36.50 3.41
98 99 2.104859 CCATCTGCCTCGCACAGTG 61.105 63.158 0.00 0.00 36.50 3.66
99 100 2.267006 CCATCTGCCTCGCACAGT 59.733 61.111 0.00 0.00 36.50 3.55
100 101 3.200593 GCCATCTGCCTCGCACAG 61.201 66.667 0.00 0.00 33.79 3.66
101 102 3.333899 ATGCCATCTGCCTCGCACA 62.334 57.895 0.00 0.00 40.16 4.57
102 103 2.515523 ATGCCATCTGCCTCGCAC 60.516 61.111 0.00 0.00 40.16 5.34
103 104 2.515290 CATGCCATCTGCCTCGCA 60.515 61.111 0.00 0.00 40.16 5.10
104 105 2.203112 TCATGCCATCTGCCTCGC 60.203 61.111 0.00 0.00 40.16 5.03
105 106 1.153309 TGTCATGCCATCTGCCTCG 60.153 57.895 0.00 0.00 40.16 4.63
106 107 1.445716 GCTGTCATGCCATCTGCCTC 61.446 60.000 0.00 0.00 40.16 4.70
107 108 1.453379 GCTGTCATGCCATCTGCCT 60.453 57.895 0.00 0.00 40.16 4.75
108 109 3.117372 GCTGTCATGCCATCTGCC 58.883 61.111 0.00 0.00 40.16 4.85
136 137 4.527583 CTCTGCCTCTGCGCCCTC 62.528 72.222 4.18 0.00 41.78 4.30
138 139 4.828925 GACTCTGCCTCTGCGCCC 62.829 72.222 4.18 0.00 41.78 6.13
140 141 3.052620 TACGACTCTGCCTCTGCGC 62.053 63.158 0.00 0.00 41.78 6.09
141 142 1.226435 GTACGACTCTGCCTCTGCG 60.226 63.158 0.00 0.00 41.78 5.18
142 143 0.456995 GTGTACGACTCTGCCTCTGC 60.457 60.000 0.00 0.00 38.26 4.26
143 144 0.171455 GGTGTACGACTCTGCCTCTG 59.829 60.000 0.00 0.00 0.00 3.35
144 145 2.569183 GGTGTACGACTCTGCCTCT 58.431 57.895 0.00 0.00 0.00 3.69
148 149 1.924320 AGAGCGGTGTACGACTCTGC 61.924 60.000 0.00 10.79 46.57 4.26
149 150 2.172534 AGAGCGGTGTACGACTCTG 58.827 57.895 0.00 0.00 46.57 3.35
161 162 1.298413 CGTATCGACACCAGAGCGG 60.298 63.158 0.00 0.00 42.50 5.52
162 163 1.298413 CCGTATCGACACCAGAGCG 60.298 63.158 0.00 0.00 0.00 5.03
163 164 1.065928 CCCGTATCGACACCAGAGC 59.934 63.158 0.00 0.00 0.00 4.09
164 165 0.100682 CACCCGTATCGACACCAGAG 59.899 60.000 0.00 0.00 0.00 3.35
165 166 0.322726 TCACCCGTATCGACACCAGA 60.323 55.000 0.00 0.00 0.00 3.86
166 167 0.179145 GTCACCCGTATCGACACCAG 60.179 60.000 0.00 0.00 0.00 4.00
167 168 1.597797 GGTCACCCGTATCGACACCA 61.598 60.000 0.00 0.00 0.00 4.17
168 169 1.140375 GGTCACCCGTATCGACACC 59.860 63.158 0.00 0.00 0.00 4.16
169 170 4.800355 GGTCACCCGTATCGACAC 57.200 61.111 0.00 0.00 0.00 3.67
181 182 4.736896 GCGAGGGGTGTCGGTCAC 62.737 72.222 0.00 0.00 45.47 3.67
200 201 3.928769 CACCACGATGCGATGCGG 61.929 66.667 0.00 0.00 0.00 5.69
201 202 3.928769 CCACCACGATGCGATGCG 61.929 66.667 0.00 0.00 0.00 4.73
202 203 2.511373 TCCACCACGATGCGATGC 60.511 61.111 0.00 0.00 0.00 3.91
203 204 1.884464 CCTCCACCACGATGCGATG 60.884 63.158 0.00 0.00 0.00 3.84
204 205 2.359169 ACCTCCACCACGATGCGAT 61.359 57.895 0.00 0.00 0.00 4.58
205 206 2.994995 ACCTCCACCACGATGCGA 60.995 61.111 0.00 0.00 0.00 5.10
206 207 2.815211 CACCTCCACCACGATGCG 60.815 66.667 0.00 0.00 0.00 4.73
207 208 1.741770 GACACCTCCACCACGATGC 60.742 63.158 0.00 0.00 0.00 3.91
208 209 1.446099 CGACACCTCCACCACGATG 60.446 63.158 0.00 0.00 0.00 3.84
209 210 1.595993 CTCGACACCTCCACCACGAT 61.596 60.000 0.00 0.00 0.00 3.73
210 211 2.203379 TCGACACCTCCACCACGA 60.203 61.111 0.00 0.00 0.00 4.35
211 212 2.258591 CTCGACACCTCCACCACG 59.741 66.667 0.00 0.00 0.00 4.94
212 213 2.048127 GCTCGACACCTCCACCAC 60.048 66.667 0.00 0.00 0.00 4.16
213 214 2.203640 AGCTCGACACCTCCACCA 60.204 61.111 0.00 0.00 0.00 4.17
214 215 2.574399 GAGCTCGACACCTCCACC 59.426 66.667 0.00 0.00 0.00 4.61
215 216 2.574399 GGAGCTCGACACCTCCAC 59.426 66.667 7.83 0.00 45.55 4.02
217 218 1.079750 GTTGGAGCTCGACACCTCC 60.080 63.158 7.83 12.78 46.25 4.30
218 219 1.079750 GGTTGGAGCTCGACACCTC 60.080 63.158 16.63 0.00 0.00 3.85
219 220 1.837051 TGGTTGGAGCTCGACACCT 60.837 57.895 21.76 0.00 0.00 4.00
220 221 1.668151 GTGGTTGGAGCTCGACACC 60.668 63.158 16.92 16.92 0.00 4.16
221 222 2.022129 CGTGGTTGGAGCTCGACAC 61.022 63.158 17.39 16.02 34.98 3.67
222 223 1.532604 ATCGTGGTTGGAGCTCGACA 61.533 55.000 17.39 5.07 42.87 4.35
223 224 1.078759 CATCGTGGTTGGAGCTCGAC 61.079 60.000 7.83 8.91 42.87 4.20
224 225 1.215382 CATCGTGGTTGGAGCTCGA 59.785 57.895 7.83 0.00 43.90 4.04
225 226 1.811266 CCATCGTGGTTGGAGCTCG 60.811 63.158 7.83 0.00 36.26 5.03
226 227 1.450312 CCCATCGTGGTTGGAGCTC 60.450 63.158 4.71 4.71 35.17 4.09
227 228 2.185310 GACCCATCGTGGTTGGAGCT 62.185 60.000 0.00 0.00 39.24 4.09
228 229 1.745489 GACCCATCGTGGTTGGAGC 60.745 63.158 3.82 0.00 39.24 4.70
229 230 1.191535 TAGACCCATCGTGGTTGGAG 58.808 55.000 3.82 0.00 39.24 3.86
230 231 1.760613 GATAGACCCATCGTGGTTGGA 59.239 52.381 3.82 0.00 39.24 3.53
231 232 1.484653 TGATAGACCCATCGTGGTTGG 59.515 52.381 3.82 0.00 39.24 3.77
232 233 2.979814 TGATAGACCCATCGTGGTTG 57.020 50.000 3.82 0.00 39.24 3.77
233 234 3.475566 CATGATAGACCCATCGTGGTT 57.524 47.619 0.00 0.00 39.24 3.67
236 237 2.608016 CGTCCATGATAGACCCATCGTG 60.608 54.545 0.00 0.00 40.28 4.35
237 238 1.613925 CGTCCATGATAGACCCATCGT 59.386 52.381 0.00 0.00 0.00 3.73
238 239 1.613925 ACGTCCATGATAGACCCATCG 59.386 52.381 0.00 0.00 0.00 3.84
239 240 2.628178 TCACGTCCATGATAGACCCATC 59.372 50.000 0.00 0.00 0.00 3.51
240 241 2.365617 GTCACGTCCATGATAGACCCAT 59.634 50.000 0.00 0.00 0.00 4.00
241 242 1.754803 GTCACGTCCATGATAGACCCA 59.245 52.381 0.00 0.00 0.00 4.51
242 243 1.754803 TGTCACGTCCATGATAGACCC 59.245 52.381 0.00 0.00 0.00 4.46
243 244 3.643763 GATGTCACGTCCATGATAGACC 58.356 50.000 0.00 0.00 0.00 3.85
244 245 3.003378 TCGATGTCACGTCCATGATAGAC 59.997 47.826 0.00 0.00 34.70 2.59
245 246 3.003378 GTCGATGTCACGTCCATGATAGA 59.997 47.826 0.00 0.00 34.70 1.98
246 247 3.003793 AGTCGATGTCACGTCCATGATAG 59.996 47.826 0.00 0.00 34.70 2.08
247 248 2.949644 AGTCGATGTCACGTCCATGATA 59.050 45.455 0.00 0.00 34.70 2.15
248 249 1.751351 AGTCGATGTCACGTCCATGAT 59.249 47.619 0.00 0.00 34.70 2.45
249 250 1.135402 CAGTCGATGTCACGTCCATGA 60.135 52.381 0.00 0.00 34.70 3.07
250 251 1.271876 CAGTCGATGTCACGTCCATG 58.728 55.000 2.11 0.00 34.70 3.66
251 252 0.173481 CCAGTCGATGTCACGTCCAT 59.827 55.000 0.00 0.00 34.70 3.41
252 253 1.176619 ACCAGTCGATGTCACGTCCA 61.177 55.000 0.00 0.00 34.70 4.02
253 254 0.732880 CACCAGTCGATGTCACGTCC 60.733 60.000 0.00 0.00 34.70 4.79
254 255 0.240145 TCACCAGTCGATGTCACGTC 59.760 55.000 0.00 0.00 34.70 4.34
255 256 0.039437 GTCACCAGTCGATGTCACGT 60.039 55.000 0.00 0.00 34.70 4.49
256 257 0.241213 AGTCACCAGTCGATGTCACG 59.759 55.000 0.00 0.00 0.00 4.35
257 258 1.402984 GGAGTCACCAGTCGATGTCAC 60.403 57.143 0.00 0.00 38.79 3.67
258 259 0.888619 GGAGTCACCAGTCGATGTCA 59.111 55.000 0.00 0.00 38.79 3.58
259 260 0.173708 GGGAGTCACCAGTCGATGTC 59.826 60.000 0.00 0.00 41.20 3.06
260 261 0.541998 TGGGAGTCACCAGTCGATGT 60.542 55.000 0.00 0.00 41.20 3.06
261 262 2.276869 TGGGAGTCACCAGTCGATG 58.723 57.895 0.00 0.00 41.20 3.84
262 263 4.865629 TGGGAGTCACCAGTCGAT 57.134 55.556 0.00 0.00 41.20 3.59
268 269 2.395180 TAGTGGCCTGGGAGTCACCA 62.395 60.000 3.32 0.00 41.20 4.17
269 270 1.612442 TAGTGGCCTGGGAGTCACC 60.612 63.158 3.32 0.00 38.08 4.02
270 271 1.901085 CTAGTGGCCTGGGAGTCAC 59.099 63.158 3.32 0.00 0.00 3.67
271 272 1.990060 GCTAGTGGCCTGGGAGTCA 60.990 63.158 3.32 0.00 34.27 3.41
272 273 1.681486 GAGCTAGTGGCCTGGGAGTC 61.681 65.000 3.32 0.00 43.05 3.36
273 274 1.687493 GAGCTAGTGGCCTGGGAGT 60.687 63.158 3.32 0.00 43.05 3.85
274 275 2.439104 GGAGCTAGTGGCCTGGGAG 61.439 68.421 3.32 0.00 43.05 4.30
275 276 2.365635 GGAGCTAGTGGCCTGGGA 60.366 66.667 3.32 0.00 43.05 4.37
276 277 3.854669 CGGAGCTAGTGGCCTGGG 61.855 72.222 3.32 0.00 43.05 4.45
277 278 2.759973 TCGGAGCTAGTGGCCTGG 60.760 66.667 3.32 0.00 43.05 4.45
278 279 2.496817 GTCGGAGCTAGTGGCCTG 59.503 66.667 3.32 0.00 43.05 4.85
279 280 3.141488 CGTCGGAGCTAGTGGCCT 61.141 66.667 3.32 0.00 43.05 5.19
280 281 3.127352 CTCGTCGGAGCTAGTGGCC 62.127 68.421 0.00 0.00 43.05 5.36
281 282 1.094073 TACTCGTCGGAGCTAGTGGC 61.094 60.000 0.00 0.00 44.48 5.01
282 283 1.331138 CTTACTCGTCGGAGCTAGTGG 59.669 57.143 0.00 0.00 44.48 4.00
283 284 2.277969 TCTTACTCGTCGGAGCTAGTG 58.722 52.381 0.00 0.00 44.48 2.74
284 285 2.553086 CTCTTACTCGTCGGAGCTAGT 58.447 52.381 0.00 0.00 44.48 2.57
285 286 1.262151 GCTCTTACTCGTCGGAGCTAG 59.738 57.143 11.67 0.00 45.15 3.42
286 287 1.297664 GCTCTTACTCGTCGGAGCTA 58.702 55.000 11.67 0.00 45.15 3.32
287 288 2.099994 GCTCTTACTCGTCGGAGCT 58.900 57.895 11.67 0.00 45.15 4.09
288 289 4.694102 GCTCTTACTCGTCGGAGC 57.306 61.111 4.96 4.96 44.48 4.70
289 290 0.378962 CCTGCTCTTACTCGTCGGAG 59.621 60.000 0.00 0.00 46.13 4.63
290 291 1.030488 CCCTGCTCTTACTCGTCGGA 61.030 60.000 0.00 0.00 0.00 4.55
291 292 1.433879 CCCTGCTCTTACTCGTCGG 59.566 63.158 0.00 0.00 0.00 4.79
292 293 1.226717 GCCCTGCTCTTACTCGTCG 60.227 63.158 0.00 0.00 0.00 5.12
293 294 0.461961 ATGCCCTGCTCTTACTCGTC 59.538 55.000 0.00 0.00 0.00 4.20
294 295 0.176680 CATGCCCTGCTCTTACTCGT 59.823 55.000 0.00 0.00 0.00 4.18
295 296 0.531532 CCATGCCCTGCTCTTACTCG 60.532 60.000 0.00 0.00 0.00 4.18
296 297 0.179034 CCCATGCCCTGCTCTTACTC 60.179 60.000 0.00 0.00 0.00 2.59
297 298 0.621571 TCCCATGCCCTGCTCTTACT 60.622 55.000 0.00 0.00 0.00 2.24
298 299 0.179034 CTCCCATGCCCTGCTCTTAC 60.179 60.000 0.00 0.00 0.00 2.34
299 300 0.326522 TCTCCCATGCCCTGCTCTTA 60.327 55.000 0.00 0.00 0.00 2.10
300 301 1.617536 TCTCCCATGCCCTGCTCTT 60.618 57.895 0.00 0.00 0.00 2.85
301 302 2.041762 TCTCCCATGCCCTGCTCT 59.958 61.111 0.00 0.00 0.00 4.09
302 303 2.191641 GTCTCCCATGCCCTGCTC 59.808 66.667 0.00 0.00 0.00 4.26
303 304 3.790437 CGTCTCCCATGCCCTGCT 61.790 66.667 0.00 0.00 0.00 4.24
304 305 4.864334 CCGTCTCCCATGCCCTGC 62.864 72.222 0.00 0.00 0.00 4.85
305 306 4.864334 GCCGTCTCCCATGCCCTG 62.864 72.222 0.00 0.00 0.00 4.45
315 316 4.492160 TCGATGCACCGCCGTCTC 62.492 66.667 0.00 0.00 0.00 3.36
316 317 4.498520 CTCGATGCACCGCCGTCT 62.499 66.667 0.00 0.00 0.00 4.18
317 318 4.796231 ACTCGATGCACCGCCGTC 62.796 66.667 0.00 0.00 0.00 4.79
318 319 4.796231 GACTCGATGCACCGCCGT 62.796 66.667 0.00 0.00 0.00 5.68
321 322 3.740128 ATGGGACTCGATGCACCGC 62.740 63.158 0.00 0.00 0.00 5.68
322 323 1.884464 CATGGGACTCGATGCACCG 60.884 63.158 0.00 0.00 0.00 4.94
323 324 0.531532 CTCATGGGACTCGATGCACC 60.532 60.000 0.00 0.00 0.00 5.01
324 325 1.156645 GCTCATGGGACTCGATGCAC 61.157 60.000 0.00 0.00 0.00 4.57
325 326 1.144716 GCTCATGGGACTCGATGCA 59.855 57.895 0.00 0.00 0.00 3.96
326 327 1.596477 GGCTCATGGGACTCGATGC 60.596 63.158 0.00 0.00 0.00 3.91
327 328 1.300465 CGGCTCATGGGACTCGATG 60.300 63.158 0.00 0.00 0.00 3.84
328 329 2.502492 CCGGCTCATGGGACTCGAT 61.502 63.158 0.00 0.00 0.00 3.59
329 330 3.147595 CCGGCTCATGGGACTCGA 61.148 66.667 0.00 0.00 0.00 4.04
330 331 3.432051 GACCGGCTCATGGGACTCG 62.432 68.421 0.00 0.00 0.00 4.18
331 332 0.755698 TAGACCGGCTCATGGGACTC 60.756 60.000 0.00 0.00 31.02 3.36
332 333 0.105453 ATAGACCGGCTCATGGGACT 60.105 55.000 0.00 0.00 33.08 3.85
333 334 0.034059 CATAGACCGGCTCATGGGAC 59.966 60.000 0.00 0.00 0.00 4.46
334 335 0.398522 ACATAGACCGGCTCATGGGA 60.399 55.000 0.00 0.00 0.00 4.37
335 336 0.034059 GACATAGACCGGCTCATGGG 59.966 60.000 0.00 0.00 0.00 4.00
336 337 0.034059 GGACATAGACCGGCTCATGG 59.966 60.000 0.00 0.00 0.00 3.66
337 338 0.034059 GGGACATAGACCGGCTCATG 59.966 60.000 0.00 4.63 0.00 3.07
338 339 0.398522 TGGGACATAGACCGGCTCAT 60.399 55.000 0.00 0.00 0.00 2.90
339 340 1.001120 TGGGACATAGACCGGCTCA 59.999 57.895 0.00 0.00 0.00 4.26
340 341 3.950232 TGGGACATAGACCGGCTC 58.050 61.111 0.00 0.00 0.00 4.70
353 354 3.391296 GCAAGGAAGAGTACCATATGGGA 59.609 47.826 25.55 15.55 41.15 4.37
354 355 3.392616 AGCAAGGAAGAGTACCATATGGG 59.607 47.826 25.55 8.07 44.81 4.00
355 356 4.384056 CAGCAAGGAAGAGTACCATATGG 58.616 47.826 20.68 20.68 42.17 2.74
356 357 4.101585 TCCAGCAAGGAAGAGTACCATATG 59.898 45.833 0.00 0.00 45.65 1.78
357 358 4.298626 TCCAGCAAGGAAGAGTACCATAT 58.701 43.478 0.00 0.00 45.65 1.78
358 359 3.719871 TCCAGCAAGGAAGAGTACCATA 58.280 45.455 0.00 0.00 45.65 2.74
359 360 2.551270 TCCAGCAAGGAAGAGTACCAT 58.449 47.619 0.00 0.00 45.65 3.55
360 361 2.024176 TCCAGCAAGGAAGAGTACCA 57.976 50.000 0.00 0.00 45.65 3.25
380 381 1.745489 CCAGAGTAAAGGTGCGGCC 60.745 63.158 0.00 0.00 37.58 6.13
381 382 1.745489 CCCAGAGTAAAGGTGCGGC 60.745 63.158 0.00 0.00 0.00 6.53
382 383 0.323629 TTCCCAGAGTAAAGGTGCGG 59.676 55.000 0.00 0.00 0.00 5.69
383 384 1.726853 CTTCCCAGAGTAAAGGTGCG 58.273 55.000 0.00 0.00 0.00 5.34
384 385 1.003696 AGCTTCCCAGAGTAAAGGTGC 59.996 52.381 0.00 0.00 30.13 5.01
385 386 2.303022 TGAGCTTCCCAGAGTAAAGGTG 59.697 50.000 0.00 0.00 31.36 4.00
386 387 2.569404 CTGAGCTTCCCAGAGTAAAGGT 59.431 50.000 0.00 0.00 33.65 3.50
387 388 2.679349 GCTGAGCTTCCCAGAGTAAAGG 60.679 54.545 5.14 0.00 33.65 3.11
388 389 2.626840 GCTGAGCTTCCCAGAGTAAAG 58.373 52.381 5.14 0.00 33.65 1.85
389 390 1.066858 CGCTGAGCTTCCCAGAGTAAA 60.067 52.381 1.78 0.00 33.65 2.01
390 391 0.532573 CGCTGAGCTTCCCAGAGTAA 59.467 55.000 1.78 0.00 33.65 2.24
391 392 1.323271 CCGCTGAGCTTCCCAGAGTA 61.323 60.000 1.78 0.00 33.65 2.59
392 393 2.654079 CCGCTGAGCTTCCCAGAGT 61.654 63.158 1.78 0.00 33.65 3.24
393 394 2.186384 CCGCTGAGCTTCCCAGAG 59.814 66.667 1.78 1.73 33.65 3.35
394 395 3.393970 CCCGCTGAGCTTCCCAGA 61.394 66.667 1.78 0.00 33.65 3.86
412 413 4.873129 CGTCTCCATGTCCGGCGG 62.873 72.222 22.51 22.51 0.00 6.13
413 414 2.767445 TACGTCTCCATGTCCGGCG 61.767 63.158 0.00 0.00 0.00 6.46
414 415 1.226888 GTACGTCTCCATGTCCGGC 60.227 63.158 0.00 0.00 0.00 6.13
415 416 1.063649 CGTACGTCTCCATGTCCGG 59.936 63.158 7.22 0.00 0.00 5.14
416 417 0.027716 CTCGTACGTCTCCATGTCCG 59.972 60.000 16.05 0.00 0.00 4.79
417 418 0.248539 GCTCGTACGTCTCCATGTCC 60.249 60.000 16.05 0.00 0.00 4.02
418 419 0.589229 CGCTCGTACGTCTCCATGTC 60.589 60.000 16.05 0.00 0.00 3.06
419 420 1.428219 CGCTCGTACGTCTCCATGT 59.572 57.895 16.05 0.00 0.00 3.21
420 421 1.939785 GCGCTCGTACGTCTCCATG 60.940 63.158 16.05 1.03 34.88 3.66
421 422 2.408022 GCGCTCGTACGTCTCCAT 59.592 61.111 16.05 0.00 34.88 3.41
422 423 3.807538 GGCGCTCGTACGTCTCCA 61.808 66.667 16.05 0.00 34.09 3.86
423 424 4.883300 CGGCGCTCGTACGTCTCC 62.883 72.222 16.05 11.49 34.94 3.71
424 425 4.883300 CCGGCGCTCGTACGTCTC 62.883 72.222 16.05 4.75 34.94 3.36
433 434 1.222115 ATAAATCTTCGCCGGCGCTC 61.222 55.000 42.78 5.12 39.59 5.03
434 435 0.032952 TATAAATCTTCGCCGGCGCT 59.967 50.000 42.78 23.87 39.59 5.92
435 436 0.163146 GTATAAATCTTCGCCGGCGC 59.837 55.000 42.78 21.44 39.59 6.53
436 437 1.779569 AGTATAAATCTTCGCCGGCG 58.220 50.000 42.13 42.13 41.35 6.46
437 438 3.251571 CCTAGTATAAATCTTCGCCGGC 58.748 50.000 19.07 19.07 0.00 6.13
438 439 4.516365 ACCTAGTATAAATCTTCGCCGG 57.484 45.455 0.00 0.00 0.00 6.13
439 440 6.839820 AAAACCTAGTATAAATCTTCGCCG 57.160 37.500 0.00 0.00 0.00 6.46
440 441 8.652810 TGTAAAACCTAGTATAAATCTTCGCC 57.347 34.615 0.00 0.00 0.00 5.54
452 453 9.667107 CAAATCCTTCTCATGTAAAACCTAGTA 57.333 33.333 0.00 0.00 0.00 1.82
453 454 7.611855 CCAAATCCTTCTCATGTAAAACCTAGT 59.388 37.037 0.00 0.00 0.00 2.57
454 455 7.611855 ACCAAATCCTTCTCATGTAAAACCTAG 59.388 37.037 0.00 0.00 0.00 3.02
455 456 7.466804 ACCAAATCCTTCTCATGTAAAACCTA 58.533 34.615 0.00 0.00 0.00 3.08
456 457 6.314917 ACCAAATCCTTCTCATGTAAAACCT 58.685 36.000 0.00 0.00 0.00 3.50
457 458 6.590234 ACCAAATCCTTCTCATGTAAAACC 57.410 37.500 0.00 0.00 0.00 3.27
458 459 8.573035 TGTTACCAAATCCTTCTCATGTAAAAC 58.427 33.333 0.00 0.00 0.00 2.43
459 460 8.698973 TGTTACCAAATCCTTCTCATGTAAAA 57.301 30.769 0.00 0.00 0.00 1.52
460 461 8.698973 TTGTTACCAAATCCTTCTCATGTAAA 57.301 30.769 0.00 0.00 0.00 2.01
461 462 7.393234 CCTTGTTACCAAATCCTTCTCATGTAA 59.607 37.037 0.00 0.00 0.00 2.41
462 463 6.884295 CCTTGTTACCAAATCCTTCTCATGTA 59.116 38.462 0.00 0.00 0.00 2.29
463 464 5.711976 CCTTGTTACCAAATCCTTCTCATGT 59.288 40.000 0.00 0.00 0.00 3.21
464 465 5.711976 ACCTTGTTACCAAATCCTTCTCATG 59.288 40.000 0.00 0.00 0.00 3.07
465 466 5.892348 ACCTTGTTACCAAATCCTTCTCAT 58.108 37.500 0.00 0.00 0.00 2.90
466 467 5.319043 ACCTTGTTACCAAATCCTTCTCA 57.681 39.130 0.00 0.00 0.00 3.27
467 468 7.610305 TGAATACCTTGTTACCAAATCCTTCTC 59.390 37.037 0.00 0.00 0.00 2.87
468 469 7.466804 TGAATACCTTGTTACCAAATCCTTCT 58.533 34.615 0.00 0.00 0.00 2.85
469 470 7.393515 ACTGAATACCTTGTTACCAAATCCTTC 59.606 37.037 0.00 0.00 0.00 3.46
470 471 7.238710 ACTGAATACCTTGTTACCAAATCCTT 58.761 34.615 0.00 0.00 0.00 3.36
471 472 6.790319 ACTGAATACCTTGTTACCAAATCCT 58.210 36.000 0.00 0.00 0.00 3.24
472 473 7.039993 ACAACTGAATACCTTGTTACCAAATCC 60.040 37.037 0.00 0.00 0.00 3.01
473 474 7.807907 CACAACTGAATACCTTGTTACCAAATC 59.192 37.037 0.00 0.00 0.00 2.17
474 475 7.255801 CCACAACTGAATACCTTGTTACCAAAT 60.256 37.037 0.00 0.00 0.00 2.32
475 476 6.039941 CCACAACTGAATACCTTGTTACCAAA 59.960 38.462 0.00 0.00 0.00 3.28
476 477 5.533154 CCACAACTGAATACCTTGTTACCAA 59.467 40.000 0.00 0.00 0.00 3.67
477 478 5.067273 CCACAACTGAATACCTTGTTACCA 58.933 41.667 0.00 0.00 0.00 3.25
478 479 5.310451 TCCACAACTGAATACCTTGTTACC 58.690 41.667 0.00 0.00 0.00 2.85
479 480 6.708949 TCTTCCACAACTGAATACCTTGTTAC 59.291 38.462 0.00 0.00 0.00 2.50
480 481 6.833041 TCTTCCACAACTGAATACCTTGTTA 58.167 36.000 0.00 0.00 0.00 2.41
481 482 5.690865 TCTTCCACAACTGAATACCTTGTT 58.309 37.500 0.00 0.00 0.00 2.83
482 483 5.304686 TCTTCCACAACTGAATACCTTGT 57.695 39.130 0.00 0.00 0.00 3.16
483 484 5.939883 TCATCTTCCACAACTGAATACCTTG 59.060 40.000 0.00 0.00 0.00 3.61
484 485 5.940470 GTCATCTTCCACAACTGAATACCTT 59.060 40.000 0.00 0.00 0.00 3.50
485 486 5.013079 TGTCATCTTCCACAACTGAATACCT 59.987 40.000 0.00 0.00 0.00 3.08
486 487 5.245531 TGTCATCTTCCACAACTGAATACC 58.754 41.667 0.00 0.00 0.00 2.73
487 488 6.992063 ATGTCATCTTCCACAACTGAATAC 57.008 37.500 0.00 0.00 0.00 1.89
488 489 9.513906 TTAAATGTCATCTTCCACAACTGAATA 57.486 29.630 0.00 0.00 0.00 1.75
489 490 6.906157 AAATGTCATCTTCCACAACTGAAT 57.094 33.333 0.00 0.00 0.00 2.57
490 491 7.719193 TCTTAAATGTCATCTTCCACAACTGAA 59.281 33.333 0.00 0.00 0.00 3.02
491 492 7.223584 TCTTAAATGTCATCTTCCACAACTGA 58.776 34.615 0.00 0.00 0.00 3.41
492 493 7.439157 TCTTAAATGTCATCTTCCACAACTG 57.561 36.000 0.00 0.00 0.00 3.16
493 494 7.667219 ACATCTTAAATGTCATCTTCCACAACT 59.333 33.333 0.00 0.00 0.00 3.16
494 495 7.752239 CACATCTTAAATGTCATCTTCCACAAC 59.248 37.037 0.00 0.00 0.00 3.32
495 496 7.665145 TCACATCTTAAATGTCATCTTCCACAA 59.335 33.333 0.00 0.00 0.00 3.33
496 497 7.119699 GTCACATCTTAAATGTCATCTTCCACA 59.880 37.037 0.00 0.00 0.00 4.17
497 498 7.414540 GGTCACATCTTAAATGTCATCTTCCAC 60.415 40.741 0.00 0.00 0.00 4.02
498 499 6.599244 GGTCACATCTTAAATGTCATCTTCCA 59.401 38.462 0.00 0.00 0.00 3.53
499 500 6.238211 CGGTCACATCTTAAATGTCATCTTCC 60.238 42.308 0.00 0.00 0.00 3.46
500 501 6.535150 TCGGTCACATCTTAAATGTCATCTTC 59.465 38.462 0.00 0.00 0.00 2.87
501 502 6.406370 TCGGTCACATCTTAAATGTCATCTT 58.594 36.000 0.00 0.00 0.00 2.40
502 503 5.977635 TCGGTCACATCTTAAATGTCATCT 58.022 37.500 0.00 0.00 0.00 2.90
503 504 6.479990 TGATCGGTCACATCTTAAATGTCATC 59.520 38.462 0.00 0.00 0.00 2.92
504 505 6.348498 TGATCGGTCACATCTTAAATGTCAT 58.652 36.000 0.00 0.00 0.00 3.06
505 506 5.729510 TGATCGGTCACATCTTAAATGTCA 58.270 37.500 0.00 0.00 0.00 3.58
519 520 0.536724 CCATGGACAGTGATCGGTCA 59.463 55.000 5.56 0.00 39.78 4.02
520 521 0.824109 TCCATGGACAGTGATCGGTC 59.176 55.000 11.44 0.00 37.89 4.79
521 522 0.537188 GTCCATGGACAGTGATCGGT 59.463 55.000 35.21 0.00 44.02 4.69
522 523 3.369381 GTCCATGGACAGTGATCGG 57.631 57.895 35.21 0.00 44.02 4.18
531 532 2.523440 TCCGGGTATGTCCATGGAC 58.477 57.895 33.97 33.97 44.77 4.02
532 533 1.396607 CGTCCGGGTATGTCCATGGA 61.397 60.000 11.44 11.44 39.10 3.41
533 534 1.069090 CGTCCGGGTATGTCCATGG 59.931 63.158 4.97 4.97 38.11 3.66
534 535 1.594293 GCGTCCGGGTATGTCCATG 60.594 63.158 0.00 0.00 38.11 3.66
535 536 1.407656 ATGCGTCCGGGTATGTCCAT 61.408 55.000 0.00 0.00 38.11 3.41
536 537 1.618876 AATGCGTCCGGGTATGTCCA 61.619 55.000 0.00 0.00 38.11 4.02
537 538 0.878961 GAATGCGTCCGGGTATGTCC 60.879 60.000 0.00 0.00 0.00 4.02
538 539 1.213094 CGAATGCGTCCGGGTATGTC 61.213 60.000 0.00 0.00 0.00 3.06
539 540 1.227147 CGAATGCGTCCGGGTATGT 60.227 57.895 0.00 0.00 0.00 2.29
540 541 2.594962 GCGAATGCGTCCGGGTATG 61.595 63.158 0.00 0.00 40.36 2.39
541 542 2.279918 GCGAATGCGTCCGGGTAT 60.280 61.111 0.00 0.00 40.36 2.73
551 552 0.162933 TCTCAAACGTTCGCGAATGC 59.837 50.000 34.59 18.61 44.71 3.56
552 553 2.570468 TTCTCAAACGTTCGCGAATG 57.430 45.000 33.42 33.42 44.71 2.67
553 554 2.093783 GGATTCTCAAACGTTCGCGAAT 59.906 45.455 26.23 7.03 44.71 3.34
554 555 1.458064 GGATTCTCAAACGTTCGCGAA 59.542 47.619 19.38 19.38 44.71 4.70
555 556 1.065358 GGATTCTCAAACGTTCGCGA 58.935 50.000 3.71 3.71 44.71 5.87
557 558 0.094730 CCGGATTCTCAAACGTTCGC 59.905 55.000 0.00 0.00 0.00 4.70
558 559 1.705256 TCCGGATTCTCAAACGTTCG 58.295 50.000 0.00 0.00 0.00 3.95
559 560 4.260253 GCTAATCCGGATTCTCAAACGTTC 60.260 45.833 32.43 7.43 32.50 3.95
560 561 3.621715 GCTAATCCGGATTCTCAAACGTT 59.378 43.478 32.43 8.91 32.50 3.99
561 562 3.118738 AGCTAATCCGGATTCTCAAACGT 60.119 43.478 32.43 8.87 32.50 3.99
562 563 3.458189 AGCTAATCCGGATTCTCAAACG 58.542 45.455 32.43 13.83 32.50 3.60
563 564 7.819900 ACATATAGCTAATCCGGATTCTCAAAC 59.180 37.037 32.43 15.95 32.50 2.93
564 565 7.907389 ACATATAGCTAATCCGGATTCTCAAA 58.093 34.615 32.43 14.35 32.50 2.69
565 566 7.482169 ACATATAGCTAATCCGGATTCTCAA 57.518 36.000 32.43 17.20 32.50 3.02
566 567 8.467598 GTTACATATAGCTAATCCGGATTCTCA 58.532 37.037 32.43 15.11 32.50 3.27
567 568 8.688151 AGTTACATATAGCTAATCCGGATTCTC 58.312 37.037 32.43 23.28 32.50 2.87
568 569 8.596781 AGTTACATATAGCTAATCCGGATTCT 57.403 34.615 32.43 24.85 32.50 2.40
597 598 5.163754 ACGTAATTTTGCACCTAAGAGCATC 60.164 40.000 0.00 0.00 39.44 3.91
598 599 4.700213 ACGTAATTTTGCACCTAAGAGCAT 59.300 37.500 0.00 0.00 39.44 3.79
599 600 4.069304 ACGTAATTTTGCACCTAAGAGCA 58.931 39.130 0.00 0.00 37.85 4.26
600 601 4.680171 ACGTAATTTTGCACCTAAGAGC 57.320 40.909 0.00 0.00 0.00 4.09
601 602 8.644318 ACTATACGTAATTTTGCACCTAAGAG 57.356 34.615 0.00 0.00 0.00 2.85
602 603 8.875803 CAACTATACGTAATTTTGCACCTAAGA 58.124 33.333 0.00 0.00 0.00 2.10
603 604 8.875803 TCAACTATACGTAATTTTGCACCTAAG 58.124 33.333 0.00 0.00 0.00 2.18
604 605 8.774890 TCAACTATACGTAATTTTGCACCTAA 57.225 30.769 0.00 0.00 0.00 2.69
605 606 8.774890 TTCAACTATACGTAATTTTGCACCTA 57.225 30.769 0.00 0.00 0.00 3.08
606 607 7.675962 TTCAACTATACGTAATTTTGCACCT 57.324 32.000 0.00 0.00 0.00 4.00
607 608 8.905103 ATTTCAACTATACGTAATTTTGCACC 57.095 30.769 0.00 0.00 0.00 5.01
615 616 9.669353 CGGTACACTATTTCAACTATACGTAAT 57.331 33.333 0.00 0.00 0.00 1.89
616 617 8.128582 CCGGTACACTATTTCAACTATACGTAA 58.871 37.037 0.00 0.00 0.00 3.18
617 618 7.255104 CCCGGTACACTATTTCAACTATACGTA 60.255 40.741 0.00 0.00 0.00 3.57
618 619 6.460123 CCCGGTACACTATTTCAACTATACGT 60.460 42.308 0.00 0.00 0.00 3.57
619 620 5.916883 CCCGGTACACTATTTCAACTATACG 59.083 44.000 0.00 0.00 0.00 3.06
620 621 7.042797 TCCCGGTACACTATTTCAACTATAC 57.957 40.000 0.00 0.00 0.00 1.47
621 622 7.658525 TTCCCGGTACACTATTTCAACTATA 57.341 36.000 0.00 0.00 0.00 1.31
622 623 6.549433 TTCCCGGTACACTATTTCAACTAT 57.451 37.500 0.00 0.00 0.00 2.12
623 624 5.999205 TTCCCGGTACACTATTTCAACTA 57.001 39.130 0.00 0.00 0.00 2.24
624 625 4.895668 TTCCCGGTACACTATTTCAACT 57.104 40.909 0.00 0.00 0.00 3.16
625 626 4.142752 GCTTTCCCGGTACACTATTTCAAC 60.143 45.833 0.00 0.00 0.00 3.18
626 627 4.004982 GCTTTCCCGGTACACTATTTCAA 58.995 43.478 0.00 0.00 0.00 2.69
627 628 3.008157 TGCTTTCCCGGTACACTATTTCA 59.992 43.478 0.00 0.00 0.00 2.69
633 634 2.159382 CATTTGCTTTCCCGGTACACT 58.841 47.619 0.00 0.00 0.00 3.55
661 662 1.219646 TTTCCGTGGAAAGCGTGTAC 58.780 50.000 9.96 0.00 38.95 2.90
676 677 3.985279 GTGTTTAACCGGAGCATTTTTCC 59.015 43.478 9.46 0.00 0.00 3.13
700 701 1.603455 ATTCGGGGTTGTGTGCCTG 60.603 57.895 0.00 0.00 0.00 4.85
701 702 1.603455 CATTCGGGGTTGTGTGCCT 60.603 57.895 0.00 0.00 0.00 4.75
702 703 2.635443 CCATTCGGGGTTGTGTGCC 61.635 63.158 0.00 0.00 0.00 5.01
703 704 2.961768 CCATTCGGGGTTGTGTGC 59.038 61.111 0.00 0.00 0.00 4.57
704 705 1.459455 TTGCCATTCGGGGTTGTGTG 61.459 55.000 0.00 0.00 37.04 3.82
705 706 0.757188 TTTGCCATTCGGGGTTGTGT 60.757 50.000 0.00 0.00 37.04 3.72
706 707 0.038343 CTTTGCCATTCGGGGTTGTG 60.038 55.000 0.00 0.00 37.04 3.33
707 708 1.815817 GCTTTGCCATTCGGGGTTGT 61.816 55.000 0.00 0.00 37.04 3.32
708 709 1.079888 GCTTTGCCATTCGGGGTTG 60.080 57.895 0.00 0.00 37.04 3.77
709 710 0.831711 AAGCTTTGCCATTCGGGGTT 60.832 50.000 0.00 0.00 37.04 4.11
710 711 1.228862 AAGCTTTGCCATTCGGGGT 60.229 52.632 0.00 0.00 37.04 4.95
711 712 1.216178 CAAGCTTTGCCATTCGGGG 59.784 57.895 0.00 0.00 37.04 5.73
712 713 4.895854 CAAGCTTTGCCATTCGGG 57.104 55.556 0.00 0.00 40.85 5.14
753 754 1.890041 CGAGTTGGCGTTGGACCAA 60.890 57.895 1.69 1.69 44.86 3.67
935 945 2.372172 GGGAGAGGAAGTGAAAGTGGAA 59.628 50.000 0.00 0.00 0.00 3.53
936 946 1.978580 GGGAGAGGAAGTGAAAGTGGA 59.021 52.381 0.00 0.00 0.00 4.02
937 947 1.003696 GGGGAGAGGAAGTGAAAGTGG 59.996 57.143 0.00 0.00 0.00 4.00
938 948 1.981495 AGGGGAGAGGAAGTGAAAGTG 59.019 52.381 0.00 0.00 0.00 3.16
939 949 1.981495 CAGGGGAGAGGAAGTGAAAGT 59.019 52.381 0.00 0.00 0.00 2.66
943 953 1.978580 GAAACAGGGGAGAGGAAGTGA 59.021 52.381 0.00 0.00 0.00 3.41
995 1018 2.010043 GCAGGGATGCTGCCATTTTTG 61.010 52.381 0.00 0.00 41.58 2.44
1396 1431 5.283060 TCAAATTGAACTCGCTAAAGCTC 57.717 39.130 0.00 0.00 39.32 4.09
1416 1451 7.675161 TTCACCAACCATAGAAGATAGATCA 57.325 36.000 0.00 0.00 0.00 2.92
1469 1504 5.882557 ACTAGGCATTTCATCAAACACTAGG 59.117 40.000 0.00 0.00 32.20 3.02
1538 1573 1.793613 GTTCATCGCAGCACGCAAC 60.794 57.895 0.00 0.00 42.60 4.17
1547 1582 1.471501 CGGATCTCAAGGTTCATCGCA 60.472 52.381 0.00 0.00 0.00 5.10
1548 1583 1.212616 CGGATCTCAAGGTTCATCGC 58.787 55.000 0.00 0.00 0.00 4.58
1602 1637 9.672086 CCTAAACTCTCGAAAGATAATAGTCTG 57.328 37.037 0.00 0.00 40.84 3.51
1603 1638 8.354426 GCCTAAACTCTCGAAAGATAATAGTCT 58.646 37.037 0.00 0.00 40.84 3.24
1610 1645 4.287552 AGGGCCTAAACTCTCGAAAGATA 58.712 43.478 2.82 0.00 40.84 1.98
1629 1664 2.100631 CAAACACTAGGCGCGAGGG 61.101 63.158 12.10 8.54 0.00 4.30
1656 1691 5.452077 CCACTTCTCGGGAGTTTAGAATAGG 60.452 48.000 0.00 0.00 0.00 2.57
1660 1695 3.955650 CCACTTCTCGGGAGTTTAGAA 57.044 47.619 0.00 0.00 0.00 2.10
1671 1706 2.906354 CAATTCTACCCCCACTTCTCG 58.094 52.381 0.00 0.00 0.00 4.04
1701 1754 6.000891 TGCTTGTGCTAACATTAAGTTCAG 57.999 37.500 0.00 0.00 38.16 3.02
1706 1759 5.182001 AGGAGTTGCTTGTGCTAACATTAAG 59.818 40.000 0.00 0.00 40.48 1.85
1711 1764 2.221169 CAGGAGTTGCTTGTGCTAACA 58.779 47.619 0.00 0.00 40.48 2.41
1775 1828 3.319122 ACCACCTCAAAATCTCAAAGCAC 59.681 43.478 0.00 0.00 0.00 4.40
1823 1876 5.865013 CGTGTACACATGTGTAAGTATCCAA 59.135 40.000 34.24 13.50 46.33 3.53
1848 1901 4.201676 CGCGACTGCAACAGTTAATAATCA 60.202 41.667 0.00 0.00 45.44 2.57
1869 1922 3.003275 TCAAAACATGAGGAAACAGACGC 59.997 43.478 0.00 0.00 33.04 5.19
1943 1996 3.378112 GCATAAGCACAACCATAGCAGAA 59.622 43.478 0.00 0.00 41.58 3.02
1975 2032 3.045142 CCCTGGTTTGCAGCACTG 58.955 61.111 0.00 0.00 0.00 3.66
1988 2045 1.545582 CATTTAACCACACTGGCCCTG 59.454 52.381 0.00 0.00 42.67 4.45
1996 2053 4.218417 AGTCATGAAGCCATTTAACCACAC 59.782 41.667 0.00 0.00 0.00 3.82
1997 2054 4.218200 CAGTCATGAAGCCATTTAACCACA 59.782 41.667 0.00 0.00 0.00 4.17
2012 2069 4.454678 GCATCATAACCCTTCAGTCATGA 58.545 43.478 0.00 0.00 0.00 3.07
2013 2070 3.249320 CGCATCATAACCCTTCAGTCATG 59.751 47.826 0.00 0.00 0.00 3.07
2035 2103 1.516161 TGTGACTTGTGAGCATGAGC 58.484 50.000 0.00 0.00 42.56 4.26
2079 2147 9.271828 AGGTCACTTTTTATGGCTTTAAAATTG 57.728 29.630 7.94 7.94 32.64 2.32
2083 2151 7.787028 ACAAGGTCACTTTTTATGGCTTTAAA 58.213 30.769 0.00 0.00 33.81 1.52
2205 2299 3.924114 TTCAGGTGTTGTTCTCTCCAA 57.076 42.857 0.00 0.00 0.00 3.53
2222 2316 3.057969 CCAGCACATAGACTGGTTTCA 57.942 47.619 0.79 0.00 46.95 2.69
2321 2421 9.184523 TCAGTTAACCACCCAATTATGATTAAG 57.815 33.333 0.88 0.00 0.00 1.85
2324 2424 7.838696 TGATCAGTTAACCACCCAATTATGATT 59.161 33.333 0.88 0.00 0.00 2.57
2325 2425 7.353525 TGATCAGTTAACCACCCAATTATGAT 58.646 34.615 0.88 0.84 0.00 2.45
2387 2488 1.071605 CAAGCTCCCTTTCGACTTCG 58.928 55.000 0.00 0.00 41.45 3.79
2402 2503 3.992427 CCTTTGAGAAAAGCATTCCAAGC 59.008 43.478 0.00 0.00 0.00 4.01
2541 2642 4.701651 TGGCTGATTTTCAAGGACATGTAG 59.298 41.667 0.00 0.00 0.00 2.74
2542 2643 4.661222 TGGCTGATTTTCAAGGACATGTA 58.339 39.130 0.00 0.00 0.00 2.29
2557 2658 0.403271 AAGCAGGACAGTTGGCTGAT 59.597 50.000 1.30 0.00 45.28 2.90
2582 2683 4.098914 TGCACTAGAAGGTCAAATGGTT 57.901 40.909 0.00 0.00 0.00 3.67
2584 2685 6.949352 AATATGCACTAGAAGGTCAAATGG 57.051 37.500 0.00 0.00 0.00 3.16
2585 2686 7.703621 CCAAAATATGCACTAGAAGGTCAAATG 59.296 37.037 0.00 0.00 0.00 2.32
2586 2687 7.147846 CCCAAAATATGCACTAGAAGGTCAAAT 60.148 37.037 0.00 0.00 0.00 2.32
2701 2842 5.396057 ACAATATGCATAACCCACCCTTA 57.604 39.130 11.13 0.00 0.00 2.69
2725 2866 2.583566 ACTAGGGAGCCTTACAGTCTCT 59.416 50.000 0.00 0.00 34.61 3.10
2726 2867 2.691011 CACTAGGGAGCCTTACAGTCTC 59.309 54.545 0.00 0.00 34.61 3.36
2753 2894 7.220300 CGTTCAAACAGATCACTATGGTACTAC 59.780 40.741 0.00 0.00 0.00 2.73
2754 2895 7.121611 TCGTTCAAACAGATCACTATGGTACTA 59.878 37.037 0.00 0.00 0.00 1.82
2755 2896 6.071560 TCGTTCAAACAGATCACTATGGTACT 60.072 38.462 0.00 0.00 0.00 2.73
2756 2897 6.034683 GTCGTTCAAACAGATCACTATGGTAC 59.965 42.308 0.00 0.00 0.00 3.34
2757 2898 6.097356 GTCGTTCAAACAGATCACTATGGTA 58.903 40.000 0.00 0.00 0.00 3.25
2758 2899 4.929808 GTCGTTCAAACAGATCACTATGGT 59.070 41.667 0.00 0.00 0.00 3.55
2778 2919 0.033228 TTGCAATGCCCTTTTGGTCG 59.967 50.000 1.53 0.00 38.10 4.79
2792 2933 5.833406 TTTCAGACATCTCAAGTTTGCAA 57.167 34.783 0.00 0.00 0.00 4.08
2794 2935 5.632347 CCATTTTCAGACATCTCAAGTTTGC 59.368 40.000 0.00 0.00 0.00 3.68
2866 3010 0.459489 TGGCAAGCACAAACTGTTCC 59.541 50.000 0.00 0.00 0.00 3.62
2929 3073 5.504665 GGTTGACTGATGTTGAACTGTTCAG 60.505 44.000 21.13 12.31 41.38 3.02
2947 3091 1.037493 GGGGGTGTGAAAAGGTTGAC 58.963 55.000 0.00 0.00 0.00 3.18
2986 3130 0.300789 GCTACGCTTACCGCATTGAC 59.699 55.000 0.00 0.00 41.76 3.18
3001 3155 6.961359 TGCAAACATATATCGGTATGCTAC 57.039 37.500 0.00 0.00 35.87 3.58
3035 3189 7.569297 CACAAACATTTCACATCAGGATTTTG 58.431 34.615 0.00 0.00 0.00 2.44
3051 3205 4.728058 GCGGTGTGCACAAACATT 57.272 50.000 23.59 0.00 45.45 2.71
3070 3284 4.142600 GCACACCATTCAGATTACACCTTC 60.143 45.833 0.00 0.00 0.00 3.46
3121 3335 5.277779 GCAGTAAGTAGAAACACATGCACAA 60.278 40.000 0.00 0.00 0.00 3.33
3122 3336 4.213270 GCAGTAAGTAGAAACACATGCACA 59.787 41.667 0.00 0.00 0.00 4.57
3138 3352 2.229062 TCGTCAAGAGAGTGGCAGTAAG 59.771 50.000 0.00 0.00 0.00 2.34
3181 3395 6.536941 ACAAAGCAAACGGTTATGTGATTTTT 59.463 30.769 4.94 0.00 27.73 1.94
3182 3396 6.045955 ACAAAGCAAACGGTTATGTGATTTT 58.954 32.000 4.94 0.00 27.73 1.82
3183 3397 5.596845 ACAAAGCAAACGGTTATGTGATTT 58.403 33.333 2.43 2.43 30.19 2.17
3184 3398 5.195001 ACAAAGCAAACGGTTATGTGATT 57.805 34.783 0.00 0.00 0.00 2.57
3264 3479 6.575649 GCCCTGTAGAAGGTCACAGTATTTTA 60.576 42.308 0.00 0.00 45.78 1.52
3268 3483 2.766828 GCCCTGTAGAAGGTCACAGTAT 59.233 50.000 0.00 0.00 45.78 2.12
3340 3555 1.375551 AGGTCGTGTCGCTTGTTTTT 58.624 45.000 0.00 0.00 0.00 1.94
3373 3588 3.186702 TGATCAGTCGTCAACCAAACA 57.813 42.857 0.00 0.00 0.00 2.83
3548 3766 4.570772 ACAATTGACATATCTACACCGTGC 59.429 41.667 13.59 0.00 0.00 5.34
3585 3807 1.098050 CATAGGGCCTGTGCTTCAAC 58.902 55.000 17.79 0.00 37.74 3.18
3714 3939 9.921637 GCTAATCTCAAGCTAAATATGTACTCT 57.078 33.333 0.00 0.00 37.01 3.24
3819 4044 3.710326 TCATACACACTATCTGACGGC 57.290 47.619 0.00 0.00 0.00 5.68
3838 4063 7.589395 TCAGCGACTGAGATAATCTTAAGATC 58.411 38.462 18.19 7.40 35.39 2.75
3862 4100 0.740737 AAGCAAACCACACACTGCTC 59.259 50.000 0.00 0.00 44.18 4.26
3897 4310 4.141158 AGACAGACTTGACCCCATTTCTTT 60.141 41.667 0.00 0.00 0.00 2.52
3926 4339 7.864686 TGATCTCAGACTATGTTTTGTGTTTG 58.135 34.615 0.00 0.00 0.00 2.93
4004 4420 8.854614 ATCATAATAACTTAGGATCCAGTTGC 57.145 34.615 21.97 0.00 34.17 4.17
4025 4441 2.433604 ACGGCATGACTGAGAAGATCAT 59.566 45.455 0.00 0.00 37.28 2.45
4026 4442 1.827344 ACGGCATGACTGAGAAGATCA 59.173 47.619 0.00 0.00 36.21 2.92
4027 4443 2.468831 GACGGCATGACTGAGAAGATC 58.531 52.381 0.00 0.00 0.00 2.75
4043 4459 1.140161 TTATTCCTCGGTGCGACGG 59.860 57.895 0.00 0.00 0.00 4.79
4046 4462 0.457166 CGTGTTATTCCTCGGTGCGA 60.457 55.000 0.00 0.00 0.00 5.10
4052 4468 1.625616 AAGCGTCGTGTTATTCCTCG 58.374 50.000 0.00 0.00 0.00 4.63
4055 4471 2.239201 GCAAAAGCGTCGTGTTATTCC 58.761 47.619 0.00 0.00 0.00 3.01
4067 4483 4.043750 TGATCAAAAAGACTGCAAAAGCG 58.956 39.130 0.00 0.00 0.00 4.68
4068 4484 5.614013 GCATGATCAAAAAGACTGCAAAAGC 60.614 40.000 9.71 0.00 0.00 3.51
4070 4486 4.445052 CGCATGATCAAAAAGACTGCAAAA 59.555 37.500 13.85 0.00 0.00 2.44
4073 4489 2.813172 TCGCATGATCAAAAAGACTGCA 59.187 40.909 13.85 0.00 0.00 4.41
4077 4493 3.663908 CTCGTCGCATGATCAAAAAGAC 58.336 45.455 0.00 6.69 0.00 3.01
4079 4497 2.094894 AGCTCGTCGCATGATCAAAAAG 59.905 45.455 0.00 0.00 42.61 2.27
4082 4500 1.280982 GAGCTCGTCGCATGATCAAA 58.719 50.000 0.00 0.00 42.61 2.69
4086 4504 0.108186 TTTGGAGCTCGTCGCATGAT 60.108 50.000 7.83 0.00 42.61 2.45
4089 4509 2.309528 TAATTTGGAGCTCGTCGCAT 57.690 45.000 7.83 0.00 42.61 4.73
4096 4516 6.624423 TGCAAGATTCTTTAATTTGGAGCTC 58.376 36.000 4.71 4.71 0.00 4.09
4099 4519 8.991243 TTCATGCAAGATTCTTTAATTTGGAG 57.009 30.769 0.00 0.00 0.00 3.86
4105 4525 9.042008 GCATTGATTCATGCAAGATTCTTTAAT 57.958 29.630 13.22 4.52 42.90 1.40
4106 4526 7.493320 GGCATTGATTCATGCAAGATTCTTTAA 59.507 33.333 13.22 2.72 45.01 1.52
4107 4527 6.982141 GGCATTGATTCATGCAAGATTCTTTA 59.018 34.615 13.22 2.44 45.01 1.85
4118 4538 3.987868 GTGATGATGGCATTGATTCATGC 59.012 43.478 0.00 10.68 42.67 4.06
4126 4546 2.097036 ACTGTGGTGATGATGGCATTG 58.903 47.619 0.00 0.00 34.11 2.82
4127 4547 2.519771 ACTGTGGTGATGATGGCATT 57.480 45.000 0.00 0.00 34.11 3.56
4128 4548 2.519771 AACTGTGGTGATGATGGCAT 57.480 45.000 0.00 0.00 37.47 4.40
4130 4550 2.710377 TGTAACTGTGGTGATGATGGC 58.290 47.619 0.00 0.00 0.00 4.40
4132 4552 6.023435 CGATTTTGTAACTGTGGTGATGATG 58.977 40.000 0.00 0.00 0.00 3.07
4133 4553 5.937540 TCGATTTTGTAACTGTGGTGATGAT 59.062 36.000 0.00 0.00 0.00 2.45
4135 4555 5.605564 TCGATTTTGTAACTGTGGTGATG 57.394 39.130 0.00 0.00 0.00 3.07
4137 4557 5.361427 TCTTCGATTTTGTAACTGTGGTGA 58.639 37.500 0.00 0.00 0.00 4.02
4139 4559 6.053005 TCTTCTTCGATTTTGTAACTGTGGT 58.947 36.000 0.00 0.00 0.00 4.16
4140 4560 6.539649 TCTTCTTCGATTTTGTAACTGTGG 57.460 37.500 0.00 0.00 0.00 4.17
4141 4561 7.796838 TCATCTTCTTCGATTTTGTAACTGTG 58.203 34.615 0.00 0.00 0.00 3.66
4142 4562 7.962964 TCATCTTCTTCGATTTTGTAACTGT 57.037 32.000 0.00 0.00 0.00 3.55
4143 4563 8.659491 TCATCATCTTCTTCGATTTTGTAACTG 58.341 33.333 0.00 0.00 0.00 3.16
4144 4564 8.777865 TCATCATCTTCTTCGATTTTGTAACT 57.222 30.769 0.00 0.00 0.00 2.24
4145 4565 9.430838 CATCATCATCTTCTTCGATTTTGTAAC 57.569 33.333 0.00 0.00 0.00 2.50
4146 4566 9.382275 TCATCATCATCTTCTTCGATTTTGTAA 57.618 29.630 0.00 0.00 0.00 2.41
4147 4567 8.947055 TCATCATCATCTTCTTCGATTTTGTA 57.053 30.769 0.00 0.00 0.00 2.41
4148 4568 7.012138 CCTCATCATCATCTTCTTCGATTTTGT 59.988 37.037 0.00 0.00 0.00 2.83
4152 4572 6.416631 TCCTCATCATCATCTTCTTCGATT 57.583 37.500 0.00 0.00 0.00 3.34
4153 4573 6.267242 TCTTCCTCATCATCATCTTCTTCGAT 59.733 38.462 0.00 0.00 0.00 3.59
4154 4574 5.595952 TCTTCCTCATCATCATCTTCTTCGA 59.404 40.000 0.00 0.00 0.00 3.71
4156 4576 7.769970 ACTTTCTTCCTCATCATCATCTTCTTC 59.230 37.037 0.00 0.00 0.00 2.87
4157 4577 7.631933 ACTTTCTTCCTCATCATCATCTTCTT 58.368 34.615 0.00 0.00 0.00 2.52
4158 4578 7.197901 ACTTTCTTCCTCATCATCATCTTCT 57.802 36.000 0.00 0.00 0.00 2.85
4159 4579 7.551974 TGAACTTTCTTCCTCATCATCATCTTC 59.448 37.037 0.00 0.00 0.00 2.87
4160 4580 7.400439 TGAACTTTCTTCCTCATCATCATCTT 58.600 34.615 0.00 0.00 0.00 2.40
4162 4582 6.260493 CCTGAACTTTCTTCCTCATCATCATC 59.740 42.308 0.00 0.00 0.00 2.92
4164 4584 5.013495 ACCTGAACTTTCTTCCTCATCATCA 59.987 40.000 0.00 0.00 0.00 3.07
4165 4585 5.495640 ACCTGAACTTTCTTCCTCATCATC 58.504 41.667 0.00 0.00 0.00 2.92
4167 4587 4.982241 ACCTGAACTTTCTTCCTCATCA 57.018 40.909 0.00 0.00 0.00 3.07
4168 4588 5.308825 TGAACCTGAACTTTCTTCCTCATC 58.691 41.667 0.00 0.00 0.00 2.92
4170 4590 4.164221 ACTGAACCTGAACTTTCTTCCTCA 59.836 41.667 0.00 0.00 0.00 3.86
4171 4591 4.513318 CACTGAACCTGAACTTTCTTCCTC 59.487 45.833 0.00 0.00 0.00 3.71
4172 4592 4.080299 ACACTGAACCTGAACTTTCTTCCT 60.080 41.667 0.00 0.00 0.00 3.36
4173 4593 4.200092 ACACTGAACCTGAACTTTCTTCC 58.800 43.478 0.00 0.00 0.00 3.46
4178 4598 3.427503 CGCAAACACTGAACCTGAACTTT 60.428 43.478 0.00 0.00 0.00 2.66
4181 4601 1.268539 CCGCAAACACTGAACCTGAAC 60.269 52.381 0.00 0.00 0.00 3.18
4182 4602 1.021202 CCGCAAACACTGAACCTGAA 58.979 50.000 0.00 0.00 0.00 3.02
4184 4604 1.101049 ACCCGCAAACACTGAACCTG 61.101 55.000 0.00 0.00 0.00 4.00
4185 4605 0.818040 GACCCGCAAACACTGAACCT 60.818 55.000 0.00 0.00 0.00 3.50
4503 4930 1.077068 GGCGGAATCAATGGGTGGA 60.077 57.895 0.00 0.00 0.00 4.02
4504 4931 0.756442 ATGGCGGAATCAATGGGTGG 60.756 55.000 0.00 0.00 0.00 4.61
4508 4935 0.313043 GCTCATGGCGGAATCAATGG 59.687 55.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.