Multiple sequence alignment - TraesCS4D01G278800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G278800 chr4D 100.000 5461 0 0 1 5461 450157930 450152470 0.000000e+00 10085.0
1 TraesCS4D01G278800 chr4D 85.227 88 13 0 3944 4031 95881658 95881745 2.090000e-14 91.6
2 TraesCS4D01G278800 chr4B 86.559 2113 207 47 47 2119 562940156 562938081 0.000000e+00 2257.0
3 TraesCS4D01G278800 chr4B 85.744 1950 119 67 3473 5347 562934221 562932356 0.000000e+00 1914.0
4 TraesCS4D01G278800 chr4B 94.864 1032 44 5 2281 3304 562938080 562937050 0.000000e+00 1604.0
5 TraesCS4D01G278800 chr4B 95.628 183 5 3 2101 2282 585609110 585609290 1.920000e-74 291.0
6 TraesCS4D01G278800 chr4B 89.024 164 6 5 5247 5399 127537698 127537536 5.580000e-45 193.0
7 TraesCS4D01G278800 chr4B 91.139 79 3 1 3403 3477 562937058 562936980 2.690000e-18 104.0
8 TraesCS4D01G278800 chr4A 92.636 1032 60 12 2278 3304 16498888 16499908 0.000000e+00 1471.0
9 TraesCS4D01G278800 chr4A 85.915 1065 76 42 3919 4950 16500416 16501439 0.000000e+00 1068.0
10 TraesCS4D01G278800 chr4A 89.776 802 45 14 903 1678 16497648 16498438 0.000000e+00 992.0
11 TraesCS4D01G278800 chr4A 83.421 760 82 17 3 745 16488156 16488888 0.000000e+00 665.0
12 TraesCS4D01G278800 chr4A 93.939 429 13 4 3403 3818 16499900 16500328 2.150000e-178 636.0
13 TraesCS4D01G278800 chr4A 90.028 361 30 3 1759 2119 16498540 16498894 3.850000e-126 462.0
14 TraesCS4D01G278800 chr4A 91.698 265 17 3 4943 5205 16501460 16501721 4.020000e-96 363.0
15 TraesCS4D01G278800 chr4A 90.323 62 6 0 4032 4093 143245726 143245787 1.260000e-11 82.4
16 TraesCS4D01G278800 chr6D 97.674 172 4 0 2115 2286 392897140 392896969 4.140000e-76 296.0
17 TraesCS4D01G278800 chr6D 96.429 84 3 0 3319 3402 442272536 442272619 7.380000e-29 139.0
18 TraesCS4D01G278800 chr3A 96.067 178 7 0 2112 2289 744920943 744921120 1.920000e-74 291.0
19 TraesCS4D01G278800 chr3A 88.415 164 7 5 5247 5399 59550148 59550310 2.600000e-43 187.0
20 TraesCS4D01G278800 chr3A 90.323 93 9 0 3320 3412 323103857 323103765 7.430000e-24 122.0
21 TraesCS4D01G278800 chr7D 94.624 186 10 0 2115 2300 381458387 381458572 6.920000e-74 289.0
22 TraesCS4D01G278800 chr7D 94.086 186 9 2 2096 2280 54095353 54095169 1.160000e-71 281.0
23 TraesCS4D01G278800 chr7D 95.238 84 4 0 3319 3402 115212242 115212325 3.430000e-27 134.0
24 TraesCS4D01G278800 chr7D 95.238 84 4 0 3319 3402 194482012 194482095 3.430000e-27 134.0
25 TraesCS4D01G278800 chr7A 95.135 185 6 3 2112 2294 320981168 320981351 6.920000e-74 289.0
26 TraesCS4D01G278800 chr7A 88.485 165 7 5 5247 5400 115554079 115553916 7.220000e-44 189.0
27 TraesCS4D01G278800 chr7A 88.415 164 7 5 5247 5399 732693436 732693598 2.600000e-43 187.0
28 TraesCS4D01G278800 chr7A 96.386 83 3 0 3319 3401 499600627 499600545 2.650000e-28 137.0
29 TraesCS4D01G278800 chr7A 94.048 84 5 0 3319 3402 433731075 433731158 1.600000e-25 128.0
30 TraesCS4D01G278800 chr7A 88.660 97 8 2 3320 3413 47257039 47256943 1.240000e-21 115.0
31 TraesCS4D01G278800 chr7A 87.368 95 11 1 3319 3412 175244598 175244692 2.080000e-19 108.0
32 TraesCS4D01G278800 chr1D 95.580 181 6 2 2101 2280 206955522 206955701 6.920000e-74 289.0
33 TraesCS4D01G278800 chr1D 95.238 84 4 0 3319 3402 465126507 465126590 3.430000e-27 134.0
34 TraesCS4D01G278800 chr1D 91.398 93 8 0 3319 3411 106848822 106848730 1.600000e-25 128.0
35 TraesCS4D01G278800 chr1D 86.747 83 8 2 3951 4031 260320974 260320893 7.530000e-14 89.8
36 TraesCS4D01G278800 chr3B 95.109 184 5 1 2098 2281 655849599 655849420 2.490000e-73 287.0
37 TraesCS4D01G278800 chr3B 86.857 175 11 5 5236 5399 727506346 727506173 9.340000e-43 185.0
38 TraesCS4D01G278800 chr6A 92.893 197 10 3 2091 2284 60016901 60016706 3.220000e-72 283.0
39 TraesCS4D01G278800 chr2B 89.714 175 6 5 5236 5399 698590131 698590304 4.290000e-51 213.0
40 TraesCS4D01G278800 chr2B 88.485 165 7 5 5247 5400 608682855 608682692 7.220000e-44 189.0
41 TraesCS4D01G278800 chr2B 94.030 67 3 1 4027 4093 227840688 227840753 3.480000e-17 100.0
42 TraesCS4D01G278800 chr2B 85.393 89 12 1 3942 4029 88429917 88430005 2.090000e-14 91.6
43 TraesCS4D01G278800 chr5B 88.415 164 7 5 5247 5399 547255559 547255721 2.600000e-43 187.0
44 TraesCS4D01G278800 chr5B 88.785 107 9 2 3319 3425 353019719 353019822 1.600000e-25 128.0
45 TraesCS4D01G278800 chr2A 88.415 164 7 5 5247 5399 734860143 734859981 2.600000e-43 187.0
46 TraesCS4D01G278800 chr2A 95.238 84 4 0 3319 3402 218122332 218122249 3.430000e-27 134.0
47 TraesCS4D01G278800 chr2A 88.172 93 9 2 3320 3412 202035577 202035487 5.780000e-20 110.0
48 TraesCS4D01G278800 chr2A 86.458 96 12 1 3320 3414 705767276 705767371 2.690000e-18 104.0
49 TraesCS4D01G278800 chr2A 92.537 67 4 1 4027 4093 180339528 180339593 1.620000e-15 95.3
50 TraesCS4D01G278800 chr2D 82.993 147 18 6 3952 4093 272998398 272998542 5.740000e-25 126.0
51 TraesCS4D01G278800 chr2D 93.651 63 4 0 4031 4093 169976445 169976383 1.620000e-15 95.3
52 TraesCS4D01G278800 chr5A 88.298 94 10 1 3320 3412 595905437 595905530 1.610000e-20 111.0
53 TraesCS4D01G278800 chr5A 87.368 95 10 2 3320 3413 419362081 419362174 2.080000e-19 108.0
54 TraesCS4D01G278800 chr5A 88.298 94 6 2 3319 3412 503635925 503636013 2.080000e-19 108.0
55 TraesCS4D01G278800 chr1B 92.537 67 4 1 4027 4093 326922888 326922823 1.620000e-15 95.3
56 TraesCS4D01G278800 chr5D 86.585 82 11 0 3950 4031 251307867 251307786 2.090000e-14 91.6
57 TraesCS4D01G278800 chr7B 85.227 88 11 2 3945 4031 443312267 443312353 7.530000e-14 89.8
58 TraesCS4D01G278800 chr3D 85.057 87 13 0 3934 4020 5879359 5879445 7.530000e-14 89.8
59 TraesCS4D01G278800 chr1A 94.643 56 2 1 4031 4085 24135825 24135770 9.750000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G278800 chr4D 450152470 450157930 5460 True 10085.00 10085 100.000000 1 5461 1 chr4D.!!$R1 5460
1 TraesCS4D01G278800 chr4B 562932356 562940156 7800 True 1469.75 2257 89.576500 47 5347 4 chr4B.!!$R2 5300
2 TraesCS4D01G278800 chr4A 16497648 16501721 4073 False 832.00 1471 90.665333 903 5205 6 chr4A.!!$F3 4302
3 TraesCS4D01G278800 chr4A 16488156 16488888 732 False 665.00 665 83.421000 3 745 1 chr4A.!!$F1 742

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 456 0.029834 AGAAAGCGCACACAAAGCAG 59.970 50.0 11.47 0.00 0.0 4.24 F
892 939 0.037734 ACCAAGGTTCCATTCCCGTC 59.962 55.0 0.00 0.00 0.0 4.79 F
1257 1318 0.232303 GCGTTTTGAGTGACAGTCCG 59.768 55.0 7.82 5.25 0.0 4.79 F
2916 3058 0.179000 CTGCGGTCATCCTAGGCTTT 59.821 55.0 2.96 0.00 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1974 2107 0.250640 CAGCCTCAGCAACCTCTGTT 60.251 55.000 0.00 0.0 43.56 3.16 R
2803 2944 1.227853 GTGACGGGGCTGTTGAAGT 60.228 57.895 0.00 0.0 0.00 3.01 R
3020 3162 2.086869 ACAAATCATGAGTTCTGCCCG 58.913 47.619 5.22 0.0 0.00 6.13 R
4637 7591 0.404426 GGGCAGGGGTAAAAGTGTCT 59.596 55.000 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.404265 TCAGCATTTGTTGACAAGCG 57.596 45.000 0.00 0.00 37.15 4.68
40 41 9.393249 TGACAAGCGTAAAAATAATCAAAGAAG 57.607 29.630 0.00 0.00 0.00 2.85
72 73 8.272866 GGAACAAAATAAACTTGATTTTCGTGG 58.727 33.333 0.00 0.00 34.93 4.94
124 126 1.618837 AGAAGAAGCTCGTAAGGCACA 59.381 47.619 0.00 0.00 36.22 4.57
155 157 6.425114 GGCATACTTGACGATATCAGACAATT 59.575 38.462 3.12 5.90 38.99 2.32
161 163 8.204160 ACTTGACGATATCAGACAATTGGATAA 58.796 33.333 10.83 0.00 38.99 1.75
171 173 1.111277 AATTGGATAAACCCAGCGGC 58.889 50.000 0.00 0.00 37.53 6.53
227 229 8.450578 AATCTAAGCAATGTTCATTAATCCGA 57.549 30.769 0.00 0.00 0.00 4.55
291 293 4.002982 CCATCCAATGTCGAACAGAGAAA 58.997 43.478 0.00 0.00 0.00 2.52
330 333 0.322816 ACGGAAATGAGCACATGCCT 60.323 50.000 12.28 0.00 43.38 4.75
338 341 0.318441 GAGCACATGCCTATCCGCTA 59.682 55.000 0.00 0.00 43.38 4.26
360 363 0.041312 CAAACAAAGACGACCGCCAG 60.041 55.000 0.00 0.00 0.00 4.85
376 379 1.102809 CCAGCAAGGCACAACAGTCA 61.103 55.000 0.00 0.00 0.00 3.41
378 381 1.008079 GCAAGGCACAACAGTCAGC 60.008 57.895 0.00 0.00 0.00 4.26
393 396 4.225042 ACAGTCAGCTGGGATACACAATTA 59.775 41.667 15.13 0.00 46.62 1.40
409 412 3.056304 CAATTAAACCAGGCAAACCGTG 58.944 45.455 0.00 0.00 42.76 4.94
447 456 0.029834 AGAAAGCGCACACAAAGCAG 59.970 50.000 11.47 0.00 0.00 4.24
451 460 0.455410 AGCGCACACAAAGCAGAAAA 59.545 45.000 11.47 0.00 0.00 2.29
452 461 1.135141 AGCGCACACAAAGCAGAAAAA 60.135 42.857 11.47 0.00 0.00 1.94
461 470 4.917474 GCAGAAAAATGCCCGCAT 57.083 50.000 0.00 0.00 40.43 4.73
516 526 4.664677 GCACGACGCCCACACTCT 62.665 66.667 0.00 0.00 32.94 3.24
534 544 1.076332 CTCCCGACGACCAAAATGAC 58.924 55.000 0.00 0.00 0.00 3.06
552 562 1.532007 GACGGACCAACGCAAAATACA 59.468 47.619 0.00 0.00 37.37 2.29
555 565 2.160615 CGGACCAACGCAAAATACATCA 59.839 45.455 0.00 0.00 0.00 3.07
562 572 5.391843 CCAACGCAAAATACATCAGATGACA 60.392 40.000 17.81 4.76 0.00 3.58
564 574 5.872635 ACGCAAAATACATCAGATGACAAG 58.127 37.500 17.81 3.21 0.00 3.16
572 582 1.203441 TCAGATGACAAGGGCCTGCT 61.203 55.000 6.92 0.00 0.00 4.24
592 603 1.696686 CCCACATTCATGGACCCCA 59.303 57.895 0.00 0.00 43.02 4.96
598 609 0.684153 ATTCATGGACCCCAAAGCCG 60.684 55.000 0.00 0.00 36.95 5.52
600 611 4.759205 ATGGACCCCAAAGCCGCC 62.759 66.667 0.00 0.00 36.95 6.13
666 683 2.048597 CGGGCAGCAAGTACGTCA 60.049 61.111 0.00 0.00 0.00 4.35
668 685 2.380410 GGGCAGCAAGTACGTCACG 61.380 63.158 0.00 0.00 0.00 4.35
681 698 2.360225 TCACGGACGGATCGGACA 60.360 61.111 7.35 0.00 0.00 4.02
685 702 2.202756 GGACGGATCGGACAGTGC 60.203 66.667 7.35 0.00 0.00 4.40
687 704 3.047718 GACGGATCGGACAGTGCGA 62.048 63.158 20.22 20.22 45.91 5.10
690 707 1.511305 GGATCGGACAGTGCGAAGA 59.489 57.895 21.78 0.00 44.81 2.87
705 722 3.865929 AAGACCGCCACGCTGACAG 62.866 63.158 0.00 0.00 0.00 3.51
737 754 2.499205 GATGGATCGGACGGCACA 59.501 61.111 0.00 0.00 0.00 4.57
755 801 2.829458 GAGGCGGGTACTCGAGCT 60.829 66.667 21.77 0.00 0.00 4.09
760 806 2.188161 CGGGTACTCGAGCTCCCTC 61.188 68.421 30.05 14.49 37.92 4.30
769 815 3.371087 GAGCTCCCTCGTTTGGATC 57.629 57.895 0.87 0.00 0.00 3.36
770 816 0.528684 GAGCTCCCTCGTTTGGATCG 60.529 60.000 0.87 0.00 0.00 3.69
771 817 1.521681 GCTCCCTCGTTTGGATCGG 60.522 63.158 0.00 0.00 0.00 4.18
772 818 1.521681 CTCCCTCGTTTGGATCGGC 60.522 63.158 0.00 0.00 0.00 5.54
777 823 3.564027 CGTTTGGATCGGCGCCTC 61.564 66.667 26.68 16.48 0.00 4.70
791 837 3.805267 CCTCGCTTGGCTTGCTAG 58.195 61.111 0.00 0.00 0.00 3.42
793 839 0.674895 CCTCGCTTGGCTTGCTAGTT 60.675 55.000 0.00 0.00 0.00 2.24
794 840 0.445436 CTCGCTTGGCTTGCTAGTTG 59.555 55.000 0.00 0.00 0.00 3.16
795 841 1.154150 CGCTTGGCTTGCTAGTTGC 60.154 57.895 0.00 0.00 43.25 4.17
806 852 2.544480 GCTAGTTGCAACCGGAATTC 57.456 50.000 25.62 0.00 42.31 2.17
807 853 1.132453 GCTAGTTGCAACCGGAATTCC 59.868 52.381 25.62 15.01 42.31 3.01
819 865 0.386731 GGAATTCCGTTGCAACCGTG 60.387 55.000 23.42 12.38 0.00 4.94
838 884 2.029649 GTGTGGCAACTCCGACTAGTTA 60.030 50.000 0.00 0.00 37.61 2.24
839 885 2.629137 TGTGGCAACTCCGACTAGTTAA 59.371 45.455 0.00 0.00 37.61 2.01
840 886 3.259876 TGTGGCAACTCCGACTAGTTAAT 59.740 43.478 0.00 0.00 37.61 1.40
841 887 3.617263 GTGGCAACTCCGACTAGTTAATG 59.383 47.826 0.00 0.00 37.61 1.90
842 888 3.195661 GGCAACTCCGACTAGTTAATGG 58.804 50.000 0.00 0.00 37.61 3.16
843 889 2.608090 GCAACTCCGACTAGTTAATGGC 59.392 50.000 0.00 0.00 37.61 4.40
844 890 3.195661 CAACTCCGACTAGTTAATGGCC 58.804 50.000 0.00 0.00 37.61 5.36
845 891 2.463752 ACTCCGACTAGTTAATGGCCA 58.536 47.619 8.56 8.56 0.00 5.36
846 892 3.039011 ACTCCGACTAGTTAATGGCCAT 58.961 45.455 14.09 14.09 0.00 4.40
847 893 4.220724 ACTCCGACTAGTTAATGGCCATA 58.779 43.478 21.15 0.00 0.00 2.74
850 896 3.323979 CCGACTAGTTAATGGCCATACCT 59.676 47.826 21.15 16.79 40.22 3.08
860 906 2.124411 TGGCCATACCTTACCTTCCTC 58.876 52.381 0.00 0.00 40.22 3.71
864 910 3.070302 GCCATACCTTACCTTCCTCTCTG 59.930 52.174 0.00 0.00 0.00 3.35
892 939 0.037734 ACCAAGGTTCCATTCCCGTC 59.962 55.000 0.00 0.00 0.00 4.79
900 947 1.375396 CCATTCCCGTCACGAAGCA 60.375 57.895 0.00 0.00 0.00 3.91
901 948 0.953471 CCATTCCCGTCACGAAGCAA 60.953 55.000 0.00 0.00 0.00 3.91
931 978 2.627945 CTATAAAACACAGCTCGCCCA 58.372 47.619 0.00 0.00 0.00 5.36
932 979 1.904287 ATAAAACACAGCTCGCCCAA 58.096 45.000 0.00 0.00 0.00 4.12
948 995 1.604755 CCCAAAACACGGATCAAACGA 59.395 47.619 0.00 0.00 34.93 3.85
991 1039 2.340328 CGGCGGAAAGGGGAAAAGG 61.340 63.158 0.00 0.00 0.00 3.11
992 1040 1.982395 GGCGGAAAGGGGAAAAGGG 60.982 63.158 0.00 0.00 0.00 3.95
1032 1080 1.176619 TCGGCCAGTTCTTCGAGTCA 61.177 55.000 2.24 0.00 0.00 3.41
1163 1219 0.460722 GGACCTTCTCTTACTCCGCC 59.539 60.000 0.00 0.00 0.00 6.13
1190 1251 0.594796 CTGTTGCTGCCCGTTTGTTC 60.595 55.000 0.00 0.00 0.00 3.18
1257 1318 0.232303 GCGTTTTGAGTGACAGTCCG 59.768 55.000 7.82 5.25 0.00 4.79
1258 1319 0.232303 CGTTTTGAGTGACAGTCCGC 59.768 55.000 7.82 0.00 0.00 5.54
1303 1364 3.174788 GGAATTGCGTCCCGTCAC 58.825 61.111 0.00 0.00 0.00 3.67
1304 1365 2.396157 GGAATTGCGTCCCGTCACC 61.396 63.158 0.00 0.00 0.00 4.02
1396 1459 5.178809 GTGTCTGTTAAGCTATTTTCGGTGT 59.821 40.000 0.00 0.00 0.00 4.16
1397 1460 5.761234 TGTCTGTTAAGCTATTTTCGGTGTT 59.239 36.000 0.00 0.00 0.00 3.32
1426 1493 2.636647 TCATGTTCAGCAACCAGACA 57.363 45.000 0.00 0.00 0.00 3.41
1469 1537 8.877864 TGTATTTGATTACTCAATTCCCAGTT 57.122 30.769 0.00 0.00 40.95 3.16
1470 1538 8.956426 TGTATTTGATTACTCAATTCCCAGTTC 58.044 33.333 0.00 0.00 40.95 3.01
1471 1539 8.956426 GTATTTGATTACTCAATTCCCAGTTCA 58.044 33.333 0.00 0.00 40.95 3.18
1472 1540 6.817765 TTGATTACTCAATTCCCAGTTCAC 57.182 37.500 0.00 0.00 36.46 3.18
1473 1541 4.935205 TGATTACTCAATTCCCAGTTCACG 59.065 41.667 0.00 0.00 0.00 4.35
1474 1542 2.930826 ACTCAATTCCCAGTTCACGT 57.069 45.000 0.00 0.00 0.00 4.49
1475 1543 5.471556 TTACTCAATTCCCAGTTCACGTA 57.528 39.130 0.00 0.00 0.00 3.57
1476 1544 4.345859 ACTCAATTCCCAGTTCACGTAA 57.654 40.909 0.00 0.00 0.00 3.18
1479 1547 2.109425 ATTCCCAGTTCACGTAAGGC 57.891 50.000 0.00 0.00 46.39 4.35
1480 1548 0.759959 TTCCCAGTTCACGTAAGGCA 59.240 50.000 0.00 0.00 46.39 4.75
1502 1575 5.049543 GCAATTATCTGACTGATTGAGCCTC 60.050 44.000 11.41 0.00 36.65 4.70
1503 1576 6.289834 CAATTATCTGACTGATTGAGCCTCT 58.710 40.000 0.00 0.00 36.65 3.69
1513 1586 3.118482 TGATTGAGCCTCTCTTGATGTCC 60.118 47.826 0.00 0.00 0.00 4.02
1607 1686 1.607467 GCCACCATGCCACTCCTTT 60.607 57.895 0.00 0.00 0.00 3.11
1623 1702 4.080863 ACTCCTTTATTCTCAGCGGATTGT 60.081 41.667 0.00 0.00 0.00 2.71
1678 1758 0.610785 TTTGCCGAATCCCCAGTTCC 60.611 55.000 0.00 0.00 0.00 3.62
1679 1759 2.124278 GCCGAATCCCCAGTTCCC 60.124 66.667 0.00 0.00 0.00 3.97
1684 1764 3.645268 AATCCCCAGTTCCCGCTGC 62.645 63.158 0.00 0.00 35.28 5.25
1686 1766 4.351054 CCCCAGTTCCCGCTGCTT 62.351 66.667 0.00 0.00 35.28 3.91
1688 1768 2.335712 CCCAGTTCCCGCTGCTTTC 61.336 63.158 0.00 0.00 35.28 2.62
1689 1769 1.600636 CCAGTTCCCGCTGCTTTCA 60.601 57.895 0.00 0.00 35.28 2.69
1690 1770 0.962356 CCAGTTCCCGCTGCTTTCAT 60.962 55.000 0.00 0.00 35.28 2.57
1691 1771 0.449388 CAGTTCCCGCTGCTTTCATC 59.551 55.000 0.00 0.00 0.00 2.92
1693 1773 1.555075 AGTTCCCGCTGCTTTCATCTA 59.445 47.619 0.00 0.00 0.00 1.98
1695 1775 2.945668 GTTCCCGCTGCTTTCATCTATT 59.054 45.455 0.00 0.00 0.00 1.73
1696 1776 4.127171 GTTCCCGCTGCTTTCATCTATTA 58.873 43.478 0.00 0.00 0.00 0.98
1697 1777 4.415881 TCCCGCTGCTTTCATCTATTAA 57.584 40.909 0.00 0.00 0.00 1.40
1698 1778 4.973168 TCCCGCTGCTTTCATCTATTAAT 58.027 39.130 0.00 0.00 0.00 1.40
1699 1779 5.376625 TCCCGCTGCTTTCATCTATTAATT 58.623 37.500 0.00 0.00 0.00 1.40
1700 1780 5.470098 TCCCGCTGCTTTCATCTATTAATTC 59.530 40.000 0.00 0.00 0.00 2.17
1732 1864 4.336993 TCTTTGTTATTTCGTTGGCTGTGT 59.663 37.500 0.00 0.00 0.00 3.72
1743 1875 3.169198 GCTGTGTCGCTAAGCCAC 58.831 61.111 0.00 0.00 0.00 5.01
1756 1888 4.574828 CGCTAAGCCACCAAACATTATAGT 59.425 41.667 0.00 0.00 0.00 2.12
1757 1889 5.065988 CGCTAAGCCACCAAACATTATAGTT 59.934 40.000 0.00 0.00 0.00 2.24
1802 1934 8.494347 CGATCTATTGATTCTGAGACAAAATCC 58.506 37.037 0.00 0.00 32.19 3.01
1829 1961 3.265479 CCTCTCTTGAATCCTTTCCACCT 59.735 47.826 0.00 0.00 0.00 4.00
1853 1985 6.819397 TCACGCTACTATATATGTGAAGCT 57.181 37.500 0.00 0.00 33.79 3.74
1857 1989 7.698550 CACGCTACTATATATGTGAAGCTTAGG 59.301 40.741 0.00 0.00 0.00 2.69
1859 1991 7.911205 CGCTACTATATATGTGAAGCTTAGGTC 59.089 40.741 0.00 0.00 0.00 3.85
1860 1992 7.911205 GCTACTATATATGTGAAGCTTAGGTCG 59.089 40.741 0.00 0.00 0.00 4.79
1862 1994 8.582657 ACTATATATGTGAAGCTTAGGTCGAT 57.417 34.615 0.00 0.00 0.00 3.59
1863 1995 8.462811 ACTATATATGTGAAGCTTAGGTCGATG 58.537 37.037 0.00 0.00 0.00 3.84
1864 1996 5.791336 ATATGTGAAGCTTAGGTCGATGA 57.209 39.130 0.00 0.00 0.00 2.92
1877 2010 7.644157 GCTTAGGTCGATGAACCATTATTTTTC 59.356 37.037 0.00 0.00 42.12 2.29
1884 2017 9.389755 TCGATGAACCATTATTTTTCTGTATGA 57.610 29.630 0.00 0.00 0.00 2.15
1897 2030 7.750229 TTTTCTGTATGATTCCATATCCAGC 57.250 36.000 0.00 0.00 37.56 4.85
1974 2107 3.694072 CACTTTTGTCTCAGGGTTGTGAA 59.306 43.478 0.00 0.00 0.00 3.18
2119 2252 7.790027 AGGTGATGCATCCATTCTATATACTC 58.210 38.462 23.67 5.76 0.00 2.59
2120 2253 6.989169 GGTGATGCATCCATTCTATATACTCC 59.011 42.308 23.67 1.74 0.00 3.85
2121 2254 6.989169 GTGATGCATCCATTCTATATACTCCC 59.011 42.308 23.67 0.00 0.00 4.30
2122 2255 6.905215 TGATGCATCCATTCTATATACTCCCT 59.095 38.462 23.67 0.00 0.00 4.20
2123 2256 6.798427 TGCATCCATTCTATATACTCCCTC 57.202 41.667 0.00 0.00 0.00 4.30
2124 2257 5.663106 TGCATCCATTCTATATACTCCCTCC 59.337 44.000 0.00 0.00 0.00 4.30
2125 2258 5.221342 GCATCCATTCTATATACTCCCTCCG 60.221 48.000 0.00 0.00 0.00 4.63
2126 2259 5.531753 TCCATTCTATATACTCCCTCCGT 57.468 43.478 0.00 0.00 0.00 4.69
2127 2260 5.900437 TCCATTCTATATACTCCCTCCGTT 58.100 41.667 0.00 0.00 0.00 4.44
2128 2261 5.950549 TCCATTCTATATACTCCCTCCGTTC 59.049 44.000 0.00 0.00 0.00 3.95
2129 2262 5.127356 CCATTCTATATACTCCCTCCGTTCC 59.873 48.000 0.00 0.00 0.00 3.62
2130 2263 5.595814 TTCTATATACTCCCTCCGTTCCT 57.404 43.478 0.00 0.00 0.00 3.36
2131 2264 6.708885 TTCTATATACTCCCTCCGTTCCTA 57.291 41.667 0.00 0.00 0.00 2.94
2132 2265 6.708885 TCTATATACTCCCTCCGTTCCTAA 57.291 41.667 0.00 0.00 0.00 2.69
2133 2266 7.095183 TCTATATACTCCCTCCGTTCCTAAA 57.905 40.000 0.00 0.00 0.00 1.85
2134 2267 7.706674 TCTATATACTCCCTCCGTTCCTAAAT 58.293 38.462 0.00 0.00 0.00 1.40
2135 2268 8.839745 TCTATATACTCCCTCCGTTCCTAAATA 58.160 37.037 0.00 0.00 0.00 1.40
2136 2269 9.643735 CTATATACTCCCTCCGTTCCTAAATAT 57.356 37.037 0.00 0.00 0.00 1.28
2137 2270 8.912614 ATATACTCCCTCCGTTCCTAAATATT 57.087 34.615 0.00 0.00 0.00 1.28
2138 2271 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2139 2272 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2140 2273 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2141 2274 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2142 2275 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2143 2276 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2144 2277 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2145 2278 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2146 2279 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
2173 2306 9.953697 AGAGATTTCAAATAGACTACGACATAC 57.046 33.333 0.00 0.00 0.00 2.39
2180 2313 7.442062 TCAAATAGACTACGACATACGGATGTA 59.558 37.037 14.70 0.00 46.64 2.29
2181 2314 7.918536 AATAGACTACGACATACGGATGTAT 57.081 36.000 14.70 7.78 46.64 2.29
2182 2315 9.440773 AAATAGACTACGACATACGGATGTATA 57.559 33.333 14.70 8.58 46.64 1.47
2183 2316 9.610705 AATAGACTACGACATACGGATGTATAT 57.389 33.333 14.70 4.66 46.64 0.86
2185 2318 8.645730 AGACTACGACATACGGATGTATATAG 57.354 38.462 14.70 16.69 46.64 1.31
2186 2319 8.473219 AGACTACGACATACGGATGTATATAGA 58.527 37.037 22.92 5.25 46.64 1.98
2187 2320 8.417780 ACTACGACATACGGATGTATATAGAC 57.582 38.462 22.92 7.58 46.64 2.59
2188 2321 8.037166 ACTACGACATACGGATGTATATAGACA 58.963 37.037 22.92 2.07 46.64 3.41
2189 2322 7.860918 ACGACATACGGATGTATATAGACAT 57.139 36.000 14.70 12.70 46.64 3.06
2190 2323 8.953368 ACGACATACGGATGTATATAGACATA 57.047 34.615 14.70 0.00 46.64 2.29
2191 2324 9.557061 ACGACATACGGATGTATATAGACATAT 57.443 33.333 14.70 5.08 46.64 1.78
2220 2353 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2221 2354 6.233434 AGTGTAGATTCACTCATTTTGCTCA 58.767 36.000 0.00 0.00 44.07 4.26
2222 2355 6.370994 AGTGTAGATTCACTCATTTTGCTCAG 59.629 38.462 0.00 0.00 44.07 3.35
2223 2356 6.148480 GTGTAGATTCACTCATTTTGCTCAGT 59.852 38.462 0.00 0.00 35.68 3.41
2224 2357 7.331934 GTGTAGATTCACTCATTTTGCTCAGTA 59.668 37.037 0.00 0.00 35.68 2.74
2225 2358 8.043113 TGTAGATTCACTCATTTTGCTCAGTAT 58.957 33.333 0.00 0.00 0.00 2.12
2226 2359 7.317842 AGATTCACTCATTTTGCTCAGTATG 57.682 36.000 0.00 0.00 37.54 2.39
2227 2360 6.883217 AGATTCACTCATTTTGCTCAGTATGT 59.117 34.615 0.00 0.00 37.40 2.29
2228 2361 8.043113 AGATTCACTCATTTTGCTCAGTATGTA 58.957 33.333 0.00 0.00 37.40 2.29
2229 2362 7.601073 TTCACTCATTTTGCTCAGTATGTAG 57.399 36.000 0.00 0.00 37.40 2.74
2230 2363 6.701340 TCACTCATTTTGCTCAGTATGTAGT 58.299 36.000 0.00 0.00 37.40 2.73
2231 2364 6.813649 TCACTCATTTTGCTCAGTATGTAGTC 59.186 38.462 0.00 0.00 37.40 2.59
2232 2365 6.591448 CACTCATTTTGCTCAGTATGTAGTCA 59.409 38.462 0.00 0.00 37.40 3.41
2233 2366 6.591834 ACTCATTTTGCTCAGTATGTAGTCAC 59.408 38.462 0.00 0.00 37.40 3.67
2234 2367 6.701340 TCATTTTGCTCAGTATGTAGTCACT 58.299 36.000 0.00 0.00 37.40 3.41
2235 2368 7.161404 TCATTTTGCTCAGTATGTAGTCACTT 58.839 34.615 0.00 0.00 37.40 3.16
2236 2369 6.785488 TTTTGCTCAGTATGTAGTCACTTG 57.215 37.500 0.00 0.00 37.40 3.16
2237 2370 5.468540 TTGCTCAGTATGTAGTCACTTGT 57.531 39.130 0.00 0.00 37.40 3.16
2238 2371 5.468540 TGCTCAGTATGTAGTCACTTGTT 57.531 39.130 0.00 0.00 37.40 2.83
2239 2372 5.230182 TGCTCAGTATGTAGTCACTTGTTG 58.770 41.667 0.00 0.00 37.40 3.33
2240 2373 5.010617 TGCTCAGTATGTAGTCACTTGTTGA 59.989 40.000 0.00 0.00 37.40 3.18
2241 2374 5.926542 GCTCAGTATGTAGTCACTTGTTGAA 59.073 40.000 0.00 0.00 34.37 2.69
2242 2375 6.423905 GCTCAGTATGTAGTCACTTGTTGAAA 59.576 38.462 0.00 0.00 34.37 2.69
2243 2376 7.118390 GCTCAGTATGTAGTCACTTGTTGAAAT 59.882 37.037 0.00 0.00 34.37 2.17
2244 2377 8.534333 TCAGTATGTAGTCACTTGTTGAAATC 57.466 34.615 0.00 0.00 34.37 2.17
2245 2378 8.367911 TCAGTATGTAGTCACTTGTTGAAATCT 58.632 33.333 0.00 0.00 34.37 2.40
2246 2379 8.651588 CAGTATGTAGTCACTTGTTGAAATCTC 58.348 37.037 0.00 0.00 35.39 2.75
2247 2380 8.589338 AGTATGTAGTCACTTGTTGAAATCTCT 58.411 33.333 0.00 0.00 35.39 3.10
2248 2381 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2249 2382 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2250 2383 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2251 2384 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2252 2385 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2253 2386 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2254 2387 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2255 2388 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2256 2389 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2257 2390 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2258 2391 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2271 2404 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2272 2405 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2273 2406 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2274 2407 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2275 2408 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2276 2409 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2277 2410 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2278 2411 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
2279 2412 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
2339 2473 7.712639 TGATAATAGGAATTGACTGACTTGAGC 59.287 37.037 0.00 0.00 0.00 4.26
2344 2478 4.390297 GGAATTGACTGACTTGAGCAGTAC 59.610 45.833 0.00 0.00 45.94 2.73
2346 2480 4.672587 TTGACTGACTTGAGCAGTACTT 57.327 40.909 0.00 0.00 45.94 2.24
2351 2491 6.489022 TGACTGACTTGAGCAGTACTTTACTA 59.511 38.462 0.00 0.00 45.94 1.82
2362 2502 7.727181 AGCAGTACTTTACTACCAAGATATGG 58.273 38.462 0.00 0.00 45.92 2.74
2391 2532 8.929746 GTTCATCTCATTTTCTGAAAATTTCCC 58.070 33.333 22.21 5.43 38.97 3.97
2545 2686 5.409826 CAGTCGAGTGCCTTTTCTTAGAATT 59.590 40.000 7.43 0.00 0.00 2.17
2803 2944 1.059098 ATTGCAGTGGTCCTGTCAGA 58.941 50.000 0.00 0.00 43.55 3.27
2834 2976 0.466555 CCGTCACCTGGAAAACCCAA 60.467 55.000 0.00 0.00 46.07 4.12
2836 2978 1.539827 CGTCACCTGGAAAACCCAATC 59.460 52.381 0.00 0.00 46.07 2.67
2902 3044 3.290308 CTACTTAGATGTAGGCTGCGG 57.710 52.381 0.00 0.00 37.01 5.69
2916 3058 0.179000 CTGCGGTCATCCTAGGCTTT 59.821 55.000 2.96 0.00 0.00 3.51
2919 3061 1.406887 GCGGTCATCCTAGGCTTTCAA 60.407 52.381 2.96 0.00 0.00 2.69
2948 3090 5.390145 GCACATTCATTTGAATCAAGCCAAC 60.390 40.000 2.83 0.00 42.41 3.77
2957 3099 4.585879 TGAATCAAGCCAACCCTACTTAC 58.414 43.478 0.00 0.00 0.00 2.34
2972 3114 6.430000 ACCCTACTTACTGTAGCATTTTGTTG 59.570 38.462 0.00 0.00 45.44 3.33
3020 3162 1.807142 CTGAACTTTCCGCTTTCCCTC 59.193 52.381 0.00 0.00 0.00 4.30
3190 3332 6.276847 AGATGCTTAGAGGTTTGATTACTCG 58.723 40.000 0.00 0.00 36.40 4.18
3194 3336 5.867716 GCTTAGAGGTTTGATTACTCGACAA 59.132 40.000 0.00 0.00 36.40 3.18
3291 3433 5.074115 CCGGGGTATTAATCAAGGCAATTA 58.926 41.667 0.00 0.00 0.00 1.40
3298 3440 9.343539 GGTATTAATCAAGGCAATTAAGAGAGT 57.656 33.333 0.00 0.00 33.40 3.24
3305 3447 8.110860 TCAAGGCAATTAAGAGAGTTTAAAGG 57.889 34.615 0.00 0.00 0.00 3.11
3306 3448 7.176690 TCAAGGCAATTAAGAGAGTTTAAAGGG 59.823 37.037 0.00 0.00 0.00 3.95
3307 3449 5.952347 AGGCAATTAAGAGAGTTTAAAGGGG 59.048 40.000 0.00 0.00 0.00 4.79
3308 3450 5.715279 GGCAATTAAGAGAGTTTAAAGGGGT 59.285 40.000 0.00 0.00 0.00 4.95
3309 3451 6.127703 GGCAATTAAGAGAGTTTAAAGGGGTC 60.128 42.308 0.00 0.00 0.00 4.46
3310 3452 6.659668 GCAATTAAGAGAGTTTAAAGGGGTCT 59.340 38.462 0.00 0.00 0.00 3.85
3311 3453 7.362142 GCAATTAAGAGAGTTTAAAGGGGTCTG 60.362 40.741 0.00 0.00 0.00 3.51
3312 3454 6.758806 TTAAGAGAGTTTAAAGGGGTCTGT 57.241 37.500 0.00 0.00 0.00 3.41
3313 3455 4.893829 AGAGAGTTTAAAGGGGTCTGTC 57.106 45.455 0.00 0.00 0.00 3.51
3314 3456 4.494591 AGAGAGTTTAAAGGGGTCTGTCT 58.505 43.478 0.00 0.00 0.00 3.41
3315 3457 5.652324 AGAGAGTTTAAAGGGGTCTGTCTA 58.348 41.667 1.88 0.00 29.31 2.59
3316 3458 5.717654 AGAGAGTTTAAAGGGGTCTGTCTAG 59.282 44.000 1.88 0.00 29.31 2.43
3317 3459 5.652324 AGAGTTTAAAGGGGTCTGTCTAGA 58.348 41.667 0.00 0.00 0.00 2.43
3318 3460 5.717654 AGAGTTTAAAGGGGTCTGTCTAGAG 59.282 44.000 0.00 0.00 32.48 2.43
3328 3470 4.364415 GTCTGTCTAGAGCACGAATCTT 57.636 45.455 0.00 0.00 32.48 2.40
3329 3471 5.487153 GTCTGTCTAGAGCACGAATCTTA 57.513 43.478 0.00 0.00 32.48 2.10
3330 3472 5.507077 GTCTGTCTAGAGCACGAATCTTAG 58.493 45.833 0.00 0.00 32.48 2.18
3331 3473 4.035792 TCTGTCTAGAGCACGAATCTTAGC 59.964 45.833 0.00 0.00 0.00 3.09
3332 3474 3.242772 TGTCTAGAGCACGAATCTTAGCG 60.243 47.826 0.00 0.00 0.00 4.26
3333 3475 2.047769 CTAGAGCACGAATCTTAGCGC 58.952 52.381 0.00 0.00 0.00 5.92
3334 3476 0.173481 AGAGCACGAATCTTAGCGCA 59.827 50.000 11.47 0.00 0.00 6.09
3335 3477 0.999406 GAGCACGAATCTTAGCGCAA 59.001 50.000 11.47 0.50 0.00 4.85
3336 3478 1.393539 GAGCACGAATCTTAGCGCAAA 59.606 47.619 11.47 0.00 0.00 3.68
3337 3479 1.804151 AGCACGAATCTTAGCGCAAAA 59.196 42.857 11.47 1.98 0.00 2.44
3338 3480 2.420022 AGCACGAATCTTAGCGCAAAAT 59.580 40.909 11.47 0.00 0.00 1.82
3339 3481 2.778386 GCACGAATCTTAGCGCAAAATC 59.222 45.455 11.47 0.00 0.00 2.17
3340 3482 3.727673 GCACGAATCTTAGCGCAAAATCA 60.728 43.478 11.47 0.00 0.00 2.57
3341 3483 4.402583 CACGAATCTTAGCGCAAAATCAA 58.597 39.130 11.47 0.00 0.00 2.57
3342 3484 5.030295 CACGAATCTTAGCGCAAAATCAAT 58.970 37.500 11.47 0.00 0.00 2.57
3343 3485 5.030295 ACGAATCTTAGCGCAAAATCAATG 58.970 37.500 11.47 0.00 0.00 2.82
3344 3486 5.163764 ACGAATCTTAGCGCAAAATCAATGA 60.164 36.000 11.47 0.00 0.00 2.57
3345 3487 5.170270 CGAATCTTAGCGCAAAATCAATGAC 59.830 40.000 11.47 0.00 0.00 3.06
3346 3488 5.565592 ATCTTAGCGCAAAATCAATGACA 57.434 34.783 11.47 0.00 0.00 3.58
3347 3489 5.565592 TCTTAGCGCAAAATCAATGACAT 57.434 34.783 11.47 0.00 0.00 3.06
3348 3490 6.676237 TCTTAGCGCAAAATCAATGACATA 57.324 33.333 11.47 0.00 0.00 2.29
3349 3491 6.718388 TCTTAGCGCAAAATCAATGACATAG 58.282 36.000 11.47 0.00 0.00 2.23
3350 3492 4.297299 AGCGCAAAATCAATGACATAGG 57.703 40.909 11.47 0.00 0.00 2.57
3351 3493 3.947196 AGCGCAAAATCAATGACATAGGA 59.053 39.130 11.47 0.00 0.00 2.94
3352 3494 4.037690 GCGCAAAATCAATGACATAGGAC 58.962 43.478 0.30 0.00 0.00 3.85
3353 3495 4.201950 GCGCAAAATCAATGACATAGGACT 60.202 41.667 0.30 0.00 0.00 3.85
3354 3496 5.505286 CGCAAAATCAATGACATAGGACTC 58.495 41.667 0.00 0.00 0.00 3.36
3355 3497 5.065090 CGCAAAATCAATGACATAGGACTCA 59.935 40.000 0.00 0.00 0.00 3.41
3356 3498 6.493116 GCAAAATCAATGACATAGGACTCAG 58.507 40.000 0.00 0.00 0.00 3.35
3357 3499 6.317140 GCAAAATCAATGACATAGGACTCAGA 59.683 38.462 0.00 0.00 0.00 3.27
3358 3500 7.013083 GCAAAATCAATGACATAGGACTCAGAT 59.987 37.037 0.00 0.00 0.00 2.90
3359 3501 8.343366 CAAAATCAATGACATAGGACTCAGATG 58.657 37.037 0.00 0.00 0.00 2.90
3360 3502 6.744175 ATCAATGACATAGGACTCAGATGT 57.256 37.500 0.00 0.00 36.52 3.06
3361 3503 5.910614 TCAATGACATAGGACTCAGATGTG 58.089 41.667 0.00 0.00 33.99 3.21
3362 3504 3.808466 TGACATAGGACTCAGATGTGC 57.192 47.619 0.00 0.00 33.99 4.57
3363 3505 3.099141 TGACATAGGACTCAGATGTGCA 58.901 45.455 0.00 0.00 33.99 4.57
3364 3506 3.515104 TGACATAGGACTCAGATGTGCAA 59.485 43.478 0.00 0.00 33.99 4.08
3365 3507 4.162888 TGACATAGGACTCAGATGTGCAAT 59.837 41.667 0.00 0.00 33.99 3.56
3366 3508 5.363580 TGACATAGGACTCAGATGTGCAATA 59.636 40.000 0.00 0.00 33.99 1.90
3367 3509 5.605534 ACATAGGACTCAGATGTGCAATAC 58.394 41.667 0.00 0.00 32.62 1.89
3368 3510 5.365025 ACATAGGACTCAGATGTGCAATACT 59.635 40.000 0.00 0.00 32.62 2.12
3369 3511 4.833478 AGGACTCAGATGTGCAATACTT 57.167 40.909 0.00 0.00 0.00 2.24
3370 3512 5.939764 AGGACTCAGATGTGCAATACTTA 57.060 39.130 0.00 0.00 0.00 2.24
3371 3513 6.299805 AGGACTCAGATGTGCAATACTTAA 57.700 37.500 0.00 0.00 0.00 1.85
3372 3514 6.711277 AGGACTCAGATGTGCAATACTTAAA 58.289 36.000 0.00 0.00 0.00 1.52
3373 3515 6.820656 AGGACTCAGATGTGCAATACTTAAAG 59.179 38.462 0.00 0.00 0.00 1.85
3374 3516 6.428385 ACTCAGATGTGCAATACTTAAAGC 57.572 37.500 0.00 0.00 0.00 3.51
3375 3517 5.939883 ACTCAGATGTGCAATACTTAAAGCA 59.060 36.000 0.00 0.00 34.10 3.91
3385 3527 8.146479 TGCAATACTTAAAGCACATCTAGATG 57.854 34.615 27.63 27.63 44.15 2.90
3464 3610 7.255139 CCTTATTAGAAAGCCCAAATTAGGACG 60.255 40.741 0.00 0.00 32.44 4.79
3844 6770 6.717540 AGTGTCCCATGTCAGACTATATAGAC 59.282 42.308 16.79 10.30 34.02 2.59
3854 6780 7.139392 GTCAGACTATATAGACGAATGCACAA 58.861 38.462 16.79 0.00 0.00 3.33
3856 6782 7.809806 TCAGACTATATAGACGAATGCACAATG 59.190 37.037 16.79 1.47 0.00 2.82
3883 6809 7.606858 TTTGATTTCTGCAATCTCAGACTAG 57.393 36.000 1.95 0.00 42.27 2.57
3995 6922 0.619543 ACGTATTGGGGTAGGCTGGT 60.620 55.000 0.00 0.00 0.00 4.00
4004 6931 1.818674 GGGTAGGCTGGTGTTGAAATG 59.181 52.381 0.00 0.00 0.00 2.32
4185 7114 1.593265 CTCCCAAACCCATTGCTGC 59.407 57.895 0.00 0.00 37.73 5.25
4207 7136 2.349755 GGGCGCCCAGTGAAGTTA 59.650 61.111 40.73 0.00 35.81 2.24
4227 7158 6.542821 AGTTAAGAAGGATCCAAATGACACA 58.457 36.000 15.82 0.00 0.00 3.72
4258 7204 9.314501 GAGTTATACGAATCTGTTTTTCACAAC 57.685 33.333 0.00 0.00 33.87 3.32
4280 7226 0.183492 TGGGCCATGCATCCTCTAAC 59.817 55.000 0.00 0.00 0.00 2.34
4311 7257 3.685139 ACCACTTGTGATCTGTACCAG 57.315 47.619 1.89 0.00 0.00 4.00
4312 7258 2.972713 ACCACTTGTGATCTGTACCAGT 59.027 45.455 1.89 0.00 32.61 4.00
4342 7288 6.434028 TCCTTTGGAAGAATTAACATGACTGG 59.566 38.462 0.00 0.00 0.00 4.00
4348 7294 6.096001 GGAAGAATTAACATGACTGGCTGATT 59.904 38.462 0.00 0.00 0.00 2.57
4467 7413 1.563410 CCAGGAAGAAATGAGGCTCCT 59.437 52.381 12.86 0.00 0.00 3.69
4476 7422 2.280457 GAGGCTCCTGTATGCGGC 60.280 66.667 2.15 0.00 0.00 6.53
4502 7448 8.862074 CGAATAAGATGATTAGATGAGCAAGAG 58.138 37.037 0.00 0.00 0.00 2.85
4533 7479 6.930164 TGTAAAGTTGCGTAATCTTACCTTGA 59.070 34.615 13.77 0.00 0.00 3.02
4534 7480 7.604927 TGTAAAGTTGCGTAATCTTACCTTGAT 59.395 33.333 13.77 0.00 0.00 2.57
4535 7481 6.422776 AAGTTGCGTAATCTTACCTTGATG 57.577 37.500 0.00 0.00 0.00 3.07
4536 7482 5.730550 AGTTGCGTAATCTTACCTTGATGA 58.269 37.500 0.00 0.00 0.00 2.92
4537 7483 5.812642 AGTTGCGTAATCTTACCTTGATGAG 59.187 40.000 0.00 0.00 0.00 2.90
4539 7485 4.119862 GCGTAATCTTACCTTGATGAGCA 58.880 43.478 0.00 0.00 0.00 4.26
4540 7486 4.570772 GCGTAATCTTACCTTGATGAGCAA 59.429 41.667 0.00 0.00 34.73 3.91
4569 7520 2.488153 GTGCGCACTTATCCTTTTCCTT 59.512 45.455 32.55 0.00 0.00 3.36
4598 7552 1.605232 CCACGTTGGACCAACCTTAAC 59.395 52.381 27.79 6.72 40.96 2.01
4612 7566 3.596214 ACCTTAACCGCACTATGAGTTG 58.404 45.455 0.00 0.00 0.00 3.16
4630 7584 5.989168 TGAGTTGTCATGTTACGACATTTCT 59.011 36.000 7.47 0.00 43.92 2.52
4637 7591 4.502171 TGTTACGACATTTCTACCGTCA 57.498 40.909 0.00 0.00 36.58 4.35
4638 7592 4.478699 TGTTACGACATTTCTACCGTCAG 58.521 43.478 0.00 0.00 36.58 3.51
4639 7593 4.216042 TGTTACGACATTTCTACCGTCAGA 59.784 41.667 0.00 0.00 36.58 3.27
4640 7594 3.213249 ACGACATTTCTACCGTCAGAC 57.787 47.619 0.00 0.00 0.00 3.51
4641 7595 2.555325 ACGACATTTCTACCGTCAGACA 59.445 45.455 0.41 0.00 0.00 3.41
4642 7596 2.915463 CGACATTTCTACCGTCAGACAC 59.085 50.000 0.41 0.00 0.00 3.67
4643 7597 3.366070 CGACATTTCTACCGTCAGACACT 60.366 47.826 0.41 0.00 0.00 3.55
4644 7598 4.557205 GACATTTCTACCGTCAGACACTT 58.443 43.478 0.41 0.00 0.00 3.16
4645 7599 4.957296 ACATTTCTACCGTCAGACACTTT 58.043 39.130 0.41 0.00 0.00 2.66
4646 7600 5.365619 ACATTTCTACCGTCAGACACTTTT 58.634 37.500 0.41 0.00 0.00 2.27
4647 7601 6.518493 ACATTTCTACCGTCAGACACTTTTA 58.482 36.000 0.41 0.00 0.00 1.52
4648 7602 6.423001 ACATTTCTACCGTCAGACACTTTTAC 59.577 38.462 0.41 0.00 0.00 2.01
4649 7603 4.510038 TCTACCGTCAGACACTTTTACC 57.490 45.455 0.41 0.00 0.00 2.85
4650 7604 2.538512 ACCGTCAGACACTTTTACCC 57.461 50.000 0.41 0.00 0.00 3.69
4651 7605 1.071228 ACCGTCAGACACTTTTACCCC 59.929 52.381 0.41 0.00 0.00 4.95
4652 7606 1.346722 CCGTCAGACACTTTTACCCCT 59.653 52.381 0.41 0.00 0.00 4.79
4653 7607 2.413837 CGTCAGACACTTTTACCCCTG 58.586 52.381 0.41 0.00 0.00 4.45
4654 7608 2.152016 GTCAGACACTTTTACCCCTGC 58.848 52.381 0.00 0.00 0.00 4.85
4655 7609 1.073284 TCAGACACTTTTACCCCTGCC 59.927 52.381 0.00 0.00 0.00 4.85
4656 7610 0.404426 AGACACTTTTACCCCTGCCC 59.596 55.000 0.00 0.00 0.00 5.36
4657 7611 0.404426 GACACTTTTACCCCTGCCCT 59.596 55.000 0.00 0.00 0.00 5.19
4658 7612 1.631898 GACACTTTTACCCCTGCCCTA 59.368 52.381 0.00 0.00 0.00 3.53
4659 7613 1.353358 ACACTTTTACCCCTGCCCTAC 59.647 52.381 0.00 0.00 0.00 3.18
4660 7614 1.633945 CACTTTTACCCCTGCCCTACT 59.366 52.381 0.00 0.00 0.00 2.57
4664 7618 3.424724 TTTACCCCTGCCCTACTGATA 57.575 47.619 0.00 0.00 0.00 2.15
4712 7666 0.175760 TCATAGACTGTTGCCTCGGC 59.824 55.000 0.00 0.00 42.35 5.54
4717 7671 0.674895 GACTGTTGCCTCGGCTCATT 60.675 55.000 9.65 3.35 42.51 2.57
4719 7673 0.169672 CTGTTGCCTCGGCTCATTTG 59.830 55.000 9.65 0.00 42.51 2.32
4805 7764 5.065218 ACGCGAAAATTTCAGAAGAGCATAT 59.935 36.000 15.93 0.00 0.00 1.78
4807 7766 5.684626 GCGAAAATTTCAGAAGAGCATATGG 59.315 40.000 4.56 0.00 0.00 2.74
4808 7767 5.684626 CGAAAATTTCAGAAGAGCATATGGC 59.315 40.000 4.56 0.00 45.30 4.40
4817 7776 4.462394 GCATATGGCTTGAGGCGA 57.538 55.556 4.56 0.00 44.42 5.54
4818 7777 2.242113 GCATATGGCTTGAGGCGAG 58.758 57.895 4.56 0.00 44.42 5.03
4819 7778 0.250038 GCATATGGCTTGAGGCGAGA 60.250 55.000 4.56 0.00 44.42 4.04
4823 7782 1.386533 ATGGCTTGAGGCGAGAAATG 58.613 50.000 0.00 0.00 44.42 2.32
4824 7783 0.677731 TGGCTTGAGGCGAGAAATGG 60.678 55.000 0.00 0.00 44.42 3.16
4826 7785 1.406887 GGCTTGAGGCGAGAAATGGTA 60.407 52.381 0.00 0.00 42.94 3.25
4827 7786 1.936547 GCTTGAGGCGAGAAATGGTAG 59.063 52.381 0.00 0.00 0.00 3.18
4828 7787 2.418746 GCTTGAGGCGAGAAATGGTAGA 60.419 50.000 0.00 0.00 0.00 2.59
4829 7788 3.861840 CTTGAGGCGAGAAATGGTAGAA 58.138 45.455 0.00 0.00 0.00 2.10
4830 7789 4.446371 CTTGAGGCGAGAAATGGTAGAAT 58.554 43.478 0.00 0.00 0.00 2.40
4831 7790 5.601662 CTTGAGGCGAGAAATGGTAGAATA 58.398 41.667 0.00 0.00 0.00 1.75
4839 7798 7.227910 GGCGAGAAATGGTAGAATATTTTGGTA 59.772 37.037 0.00 0.00 0.00 3.25
4851 7810 7.651808 AGAATATTTTGGTATTTCCGCATCTG 58.348 34.615 0.00 0.00 39.52 2.90
4857 7816 7.397892 TTTGGTATTTCCGCATCTGATAAAA 57.602 32.000 0.00 0.00 39.52 1.52
4866 7825 4.943508 GCATCTGATAAAATTGCGCTTC 57.056 40.909 9.73 0.00 0.00 3.86
4873 7832 8.432110 TCTGATAAAATTGCGCTTCTACAATA 57.568 30.769 9.73 0.00 35.49 1.90
4880 7839 7.444629 AATTGCGCTTCTACAATATGATGAT 57.555 32.000 9.73 0.00 35.49 2.45
4881 7840 5.851047 TGCGCTTCTACAATATGATGATG 57.149 39.130 9.73 0.00 0.00 3.07
4882 7841 4.692155 TGCGCTTCTACAATATGATGATGG 59.308 41.667 9.73 0.00 0.00 3.51
4883 7842 4.436584 GCGCTTCTACAATATGATGATGGC 60.437 45.833 0.00 0.00 0.00 4.40
4885 7844 5.390251 CGCTTCTACAATATGATGATGGCAC 60.390 44.000 0.00 0.00 0.00 5.01
4916 7879 6.718912 TCCCAACAAACAACATGATCATCTAA 59.281 34.615 4.86 0.00 0.00 2.10
4922 7885 9.113838 ACAAACAACATGATCATCTAATAGACC 57.886 33.333 4.86 0.00 0.00 3.85
4972 7971 4.689062 TCAATCTTCACTCCTTCCCTACT 58.311 43.478 0.00 0.00 0.00 2.57
5134 8133 1.737008 GTCCTCGTCCGTTCCAAGC 60.737 63.158 0.00 0.00 0.00 4.01
5162 8161 4.896482 AGATGGAGTACCTGATAACCTGAC 59.104 45.833 0.00 0.00 37.04 3.51
5163 8162 3.021695 TGGAGTACCTGATAACCTGACG 58.978 50.000 0.00 0.00 37.04 4.35
5165 8164 3.315749 GGAGTACCTGATAACCTGACGAG 59.684 52.174 0.00 0.00 0.00 4.18
5166 8165 3.946558 GAGTACCTGATAACCTGACGAGT 59.053 47.826 0.00 0.00 0.00 4.18
5167 8166 3.695060 AGTACCTGATAACCTGACGAGTG 59.305 47.826 0.00 0.00 0.00 3.51
5185 8186 2.046283 TGACGAACACAGAGCTTACG 57.954 50.000 0.00 0.00 0.00 3.18
5207 8208 5.828328 ACGTATCATCTCACAGTGAGGATTA 59.172 40.000 27.15 10.99 44.39 1.75
5208 8209 6.491745 ACGTATCATCTCACAGTGAGGATTAT 59.508 38.462 27.15 17.69 44.39 1.28
5209 8210 7.665974 ACGTATCATCTCACAGTGAGGATTATA 59.334 37.037 27.15 16.91 44.39 0.98
5210 8211 8.681806 CGTATCATCTCACAGTGAGGATTATAT 58.318 37.037 27.15 11.72 44.39 0.86
5214 8215 8.927411 TCATCTCACAGTGAGGATTATATTCAA 58.073 33.333 27.15 6.67 44.39 2.69
5218 8219 8.311395 TCACAGTGAGGATTATATTCAACTCT 57.689 34.615 0.00 0.00 0.00 3.24
5222 8223 7.655328 CAGTGAGGATTATATTCAACTCTCACC 59.345 40.741 18.27 0.00 46.26 4.02
5223 8224 6.642950 GTGAGGATTATATTCAACTCTCACCG 59.357 42.308 14.49 0.00 42.07 4.94
5224 8225 6.102897 AGGATTATATTCAACTCTCACCGG 57.897 41.667 0.00 0.00 0.00 5.28
5226 8227 6.015010 AGGATTATATTCAACTCTCACCGGAG 60.015 42.308 9.46 0.00 42.80 4.63
5227 8228 2.961526 TATTCAACTCTCACCGGAGC 57.038 50.000 9.46 0.00 41.13 4.70
5228 8229 0.976641 ATTCAACTCTCACCGGAGCA 59.023 50.000 9.46 0.00 41.13 4.26
5230 8231 0.827925 TCAACTCTCACCGGAGCAGT 60.828 55.000 9.46 2.55 41.13 4.40
5231 8232 0.668706 CAACTCTCACCGGAGCAGTG 60.669 60.000 9.46 3.99 41.13 3.66
5232 8233 0.827925 AACTCTCACCGGAGCAGTGA 60.828 55.000 9.46 0.00 41.84 3.41
5233 8234 0.613292 ACTCTCACCGGAGCAGTGAT 60.613 55.000 9.46 0.00 43.04 3.06
5246 8286 1.860399 GCAGTGATACGTACCTCTGCG 60.860 57.143 24.01 0.76 38.72 5.18
5247 8287 1.669265 CAGTGATACGTACCTCTGCGA 59.331 52.381 6.09 0.00 0.00 5.10
5338 8378 1.801332 GCTTCATGTCCTGCAGCAG 59.199 57.895 16.23 16.23 42.85 4.24
5350 8390 3.646650 GCAGCAGCAACAACAAGAA 57.353 47.368 0.00 0.00 41.58 2.52
5351 8391 1.484356 GCAGCAGCAACAACAAGAAG 58.516 50.000 0.00 0.00 41.58 2.85
5352 8392 1.484356 CAGCAGCAACAACAAGAAGC 58.516 50.000 0.00 0.00 0.00 3.86
5353 8393 1.066605 CAGCAGCAACAACAAGAAGCT 59.933 47.619 0.00 0.00 35.63 3.74
5354 8394 1.753073 AGCAGCAACAACAAGAAGCTT 59.247 42.857 0.00 0.00 32.35 3.74
5355 8395 2.122564 GCAGCAACAACAAGAAGCTTC 58.877 47.619 19.11 19.11 32.35 3.86
5356 8396 2.480073 GCAGCAACAACAAGAAGCTTCA 60.480 45.455 27.57 0.00 32.35 3.02
5357 8397 3.369385 CAGCAACAACAAGAAGCTTCAG 58.631 45.455 27.57 20.75 32.35 3.02
5358 8398 3.019564 AGCAACAACAAGAAGCTTCAGT 58.980 40.909 27.57 21.38 29.98 3.41
5359 8399 3.445096 AGCAACAACAAGAAGCTTCAGTT 59.555 39.130 27.57 25.26 29.98 3.16
5360 8400 3.793492 GCAACAACAAGAAGCTTCAGTTC 59.207 43.478 27.57 14.75 0.00 3.01
5361 8401 4.675146 GCAACAACAAGAAGCTTCAGTTCA 60.675 41.667 27.57 0.00 0.00 3.18
5362 8402 4.622701 ACAACAAGAAGCTTCAGTTCAC 57.377 40.909 27.57 0.00 0.00 3.18
5363 8403 3.378427 ACAACAAGAAGCTTCAGTTCACC 59.622 43.478 27.57 0.00 0.00 4.02
5364 8404 3.281727 ACAAGAAGCTTCAGTTCACCA 57.718 42.857 27.57 0.00 0.00 4.17
5365 8405 3.620488 ACAAGAAGCTTCAGTTCACCAA 58.380 40.909 27.57 0.00 0.00 3.67
5366 8406 4.210331 ACAAGAAGCTTCAGTTCACCAAT 58.790 39.130 27.57 0.28 0.00 3.16
5367 8407 4.646492 ACAAGAAGCTTCAGTTCACCAATT 59.354 37.500 27.57 6.82 0.00 2.32
5368 8408 4.843220 AGAAGCTTCAGTTCACCAATTG 57.157 40.909 27.57 0.00 0.00 2.32
5369 8409 3.571401 AGAAGCTTCAGTTCACCAATTGG 59.429 43.478 27.57 23.31 42.17 3.16
5370 8410 3.228188 AGCTTCAGTTCACCAATTGGA 57.772 42.857 31.22 6.63 38.94 3.53
5371 8411 3.771216 AGCTTCAGTTCACCAATTGGAT 58.229 40.909 31.22 12.36 38.94 3.41
5372 8412 3.760684 AGCTTCAGTTCACCAATTGGATC 59.239 43.478 31.22 16.08 38.94 3.36
5373 8413 3.119352 GCTTCAGTTCACCAATTGGATCC 60.119 47.826 31.22 14.51 38.94 3.36
5374 8414 2.710377 TCAGTTCACCAATTGGATCCG 58.290 47.619 31.22 15.20 38.94 4.18
5375 8415 2.039746 TCAGTTCACCAATTGGATCCGT 59.960 45.455 31.22 4.95 38.94 4.69
5376 8416 2.162208 CAGTTCACCAATTGGATCCGTG 59.838 50.000 31.22 17.65 38.94 4.94
5377 8417 2.039746 AGTTCACCAATTGGATCCGTGA 59.960 45.455 31.22 19.66 38.94 4.35
5378 8418 2.817258 GTTCACCAATTGGATCCGTGAA 59.183 45.455 31.22 23.90 40.22 3.18
5379 8419 3.364460 TCACCAATTGGATCCGTGAAT 57.636 42.857 31.22 1.67 38.94 2.57
5380 8420 3.016031 TCACCAATTGGATCCGTGAATG 58.984 45.455 31.22 14.76 38.94 2.67
5381 8421 2.099592 CACCAATTGGATCCGTGAATGG 59.900 50.000 31.22 12.89 38.94 3.16
5382 8422 1.682854 CCAATTGGATCCGTGAATGGG 59.317 52.381 20.50 4.80 37.39 4.00
5383 8423 2.653726 CAATTGGATCCGTGAATGGGA 58.346 47.619 7.39 0.00 38.10 4.37
5384 8424 3.225104 CAATTGGATCCGTGAATGGGAT 58.775 45.455 7.39 0.00 46.82 3.85
5385 8425 4.397420 CAATTGGATCCGTGAATGGGATA 58.603 43.478 7.39 0.00 44.23 2.59
5386 8426 3.485463 TTGGATCCGTGAATGGGATAC 57.515 47.619 7.39 0.00 44.23 2.24
5387 8427 2.689658 TGGATCCGTGAATGGGATACT 58.310 47.619 7.39 0.00 44.04 2.12
5388 8428 3.045634 TGGATCCGTGAATGGGATACTT 58.954 45.455 7.39 0.00 44.04 2.24
5389 8429 3.181455 TGGATCCGTGAATGGGATACTTG 60.181 47.826 7.39 0.00 44.04 3.16
5390 8430 3.071023 GGATCCGTGAATGGGATACTTGA 59.929 47.826 0.00 0.00 44.23 3.02
5391 8431 4.263068 GGATCCGTGAATGGGATACTTGAT 60.263 45.833 0.00 0.00 44.23 2.57
5392 8432 5.046591 GGATCCGTGAATGGGATACTTGATA 60.047 44.000 0.00 0.00 44.23 2.15
5393 8433 5.468540 TCCGTGAATGGGATACTTGATAG 57.531 43.478 0.00 0.00 0.00 2.08
5394 8434 5.144832 TCCGTGAATGGGATACTTGATAGA 58.855 41.667 0.00 0.00 0.00 1.98
5395 8435 5.780282 TCCGTGAATGGGATACTTGATAGAT 59.220 40.000 0.00 0.00 0.00 1.98
5396 8436 6.951778 TCCGTGAATGGGATACTTGATAGATA 59.048 38.462 0.00 0.00 0.00 1.98
5397 8437 7.619698 TCCGTGAATGGGATACTTGATAGATAT 59.380 37.037 0.00 0.00 0.00 1.63
5398 8438 8.914011 CCGTGAATGGGATACTTGATAGATATA 58.086 37.037 0.00 0.00 0.00 0.86
5411 8451 9.482175 ACTTGATAGATATATACCACTCCTTCC 57.518 37.037 0.00 0.00 0.00 3.46
5412 8452 9.480861 CTTGATAGATATATACCACTCCTTCCA 57.519 37.037 0.00 0.00 0.00 3.53
5417 8457 7.841956 AGATATATACCACTCCTTCCATTTCG 58.158 38.462 0.00 0.00 0.00 3.46
5418 8458 7.674348 AGATATATACCACTCCTTCCATTTCGA 59.326 37.037 0.00 0.00 0.00 3.71
5419 8459 4.837093 ATACCACTCCTTCCATTTCGAA 57.163 40.909 0.00 0.00 0.00 3.71
5420 8460 3.721087 ACCACTCCTTCCATTTCGAAT 57.279 42.857 0.00 0.00 0.00 3.34
5421 8461 4.034285 ACCACTCCTTCCATTTCGAATT 57.966 40.909 0.00 0.00 0.00 2.17
5422 8462 5.174037 ACCACTCCTTCCATTTCGAATTA 57.826 39.130 0.00 0.00 0.00 1.40
5423 8463 4.941873 ACCACTCCTTCCATTTCGAATTAC 59.058 41.667 0.00 0.00 0.00 1.89
5424 8464 4.941263 CCACTCCTTCCATTTCGAATTACA 59.059 41.667 0.00 0.00 0.00 2.41
5425 8465 5.414454 CCACTCCTTCCATTTCGAATTACAA 59.586 40.000 0.00 0.00 0.00 2.41
5426 8466 6.403636 CCACTCCTTCCATTTCGAATTACAAG 60.404 42.308 0.00 0.00 0.00 3.16
5427 8467 6.371548 CACTCCTTCCATTTCGAATTACAAGA 59.628 38.462 0.00 0.00 0.00 3.02
5428 8468 7.066284 CACTCCTTCCATTTCGAATTACAAGAT 59.934 37.037 0.00 0.00 0.00 2.40
5429 8469 7.066284 ACTCCTTCCATTTCGAATTACAAGATG 59.934 37.037 0.00 0.00 0.00 2.90
5430 8470 6.884295 TCCTTCCATTTCGAATTACAAGATGT 59.116 34.615 0.00 0.00 0.00 3.06
5431 8471 7.393234 TCCTTCCATTTCGAATTACAAGATGTT 59.607 33.333 0.00 0.00 0.00 2.71
5432 8472 7.698130 CCTTCCATTTCGAATTACAAGATGTTC 59.302 37.037 0.00 0.00 0.00 3.18
5433 8473 7.921786 TCCATTTCGAATTACAAGATGTTCT 57.078 32.000 0.00 0.00 0.00 3.01
5434 8474 9.443323 TTCCATTTCGAATTACAAGATGTTCTA 57.557 29.630 0.00 0.00 0.00 2.10
5435 8475 9.443323 TCCATTTCGAATTACAAGATGTTCTAA 57.557 29.630 0.00 0.00 0.00 2.10
5436 8476 9.490663 CCATTTCGAATTACAAGATGTTCTAAC 57.509 33.333 0.00 0.00 0.00 2.34
5441 8481 9.706691 TCGAATTACAAGATGTTCTAACTTTCT 57.293 29.630 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.737266 CGCTTGTCAACAAATGCTGATTT 59.263 39.130 0.00 0.00 35.15 2.17
1 2 3.243501 ACGCTTGTCAACAAATGCTGATT 60.244 39.130 0.00 0.00 35.15 2.57
6 7 5.382573 TTTTTACGCTTGTCAACAAATGC 57.617 34.783 0.00 0.00 35.15 3.56
11 12 8.858003 TTTGATTATTTTTACGCTTGTCAACA 57.142 26.923 0.00 0.00 0.00 3.33
12 13 9.176181 TCTTTGATTATTTTTACGCTTGTCAAC 57.824 29.630 0.00 0.00 0.00 3.18
93 94 3.433274 CGAGCTTCTTCTGCATGTGTTTA 59.567 43.478 0.00 0.00 0.00 2.01
124 126 1.557099 TCGTCAAGTATGCCTCCTGT 58.443 50.000 0.00 0.00 0.00 4.00
155 157 2.124901 CGCCGCTGGGTTTATCCA 60.125 61.111 0.00 0.00 38.11 3.41
161 163 1.003112 TATTTGACGCCGCTGGGTT 60.003 52.632 0.00 0.00 37.85 4.11
171 173 6.804534 TTGTTGTTTGCTTTCTATTTGACG 57.195 33.333 0.00 0.00 0.00 4.35
256 258 2.440517 TGGATGGTCCAATCATGGTG 57.559 50.000 0.00 0.00 45.00 4.17
291 293 1.147600 GTTGGGGTGTTGGTCGACT 59.852 57.895 16.46 0.00 0.00 4.18
330 333 4.989797 TCGTCTTTGTTTGTTTAGCGGATA 59.010 37.500 0.00 0.00 0.00 2.59
338 341 1.202211 GGCGGTCGTCTTTGTTTGTTT 60.202 47.619 0.00 0.00 0.00 2.83
360 363 1.008079 GCTGACTGTTGTGCCTTGC 60.008 57.895 0.00 0.00 0.00 4.01
376 379 4.929479 TGGTTTAATTGTGTATCCCAGCT 58.071 39.130 0.00 0.00 0.00 4.24
378 381 4.097892 GCCTGGTTTAATTGTGTATCCCAG 59.902 45.833 0.00 0.00 38.33 4.45
393 396 2.791868 GCCACGGTTTGCCTGGTTT 61.792 57.895 0.00 0.00 36.25 3.27
447 456 3.350766 CCTCATGCGGGCATTTTTC 57.649 52.632 2.85 0.00 33.90 2.29
468 477 1.202639 TGTGTACTTCACCCAGCTGTG 60.203 52.381 13.81 3.15 45.61 3.66
480 490 0.320771 CCTGCTTCGCCTGTGTACTT 60.321 55.000 0.00 0.00 0.00 2.24
508 518 2.567049 GTCGTCGGGAGAGTGTGG 59.433 66.667 0.00 0.00 41.26 4.17
511 521 0.032952 TTTTGGTCGTCGGGAGAGTG 59.967 55.000 0.00 0.00 41.26 3.51
512 522 0.974383 ATTTTGGTCGTCGGGAGAGT 59.026 50.000 0.00 0.00 41.26 3.24
513 523 1.067142 TCATTTTGGTCGTCGGGAGAG 60.067 52.381 0.00 0.00 41.26 3.20
516 526 0.668096 CGTCATTTTGGTCGTCGGGA 60.668 55.000 0.00 0.00 0.00 5.14
534 544 2.160615 TGATGTATTTTGCGTTGGTCCG 59.839 45.455 0.00 0.00 0.00 4.79
552 562 0.106819 GCAGGCCCTTGTCATCTGAT 60.107 55.000 0.00 0.00 0.00 2.90
555 565 1.302285 CAGCAGGCCCTTGTCATCT 59.698 57.895 0.00 0.00 0.00 2.90
572 582 1.000233 GGGTCCATGAATGTGGGCA 60.000 57.895 0.00 0.00 45.78 5.36
592 603 3.249189 TCACTCCCTGGCGGCTTT 61.249 61.111 11.43 0.00 0.00 3.51
598 609 2.124403 CATGCCTCACTCCCTGGC 60.124 66.667 0.00 0.00 46.26 4.85
600 611 0.911769 TAACCATGCCTCACTCCCTG 59.088 55.000 0.00 0.00 0.00 4.45
601 618 0.912486 GTAACCATGCCTCACTCCCT 59.088 55.000 0.00 0.00 0.00 4.20
604 621 1.067142 TCGTGTAACCATGCCTCACTC 60.067 52.381 0.00 0.00 0.00 3.51
612 629 1.197055 CGTCCGATCGTGTAACCATG 58.803 55.000 15.09 0.00 0.00 3.66
645 662 3.488090 GTACTTGCTGCCCGCGTC 61.488 66.667 4.92 0.00 43.27 5.19
666 683 2.360852 ACTGTCCGATCCGTCCGT 60.361 61.111 0.00 0.00 0.00 4.69
668 685 2.202756 GCACTGTCCGATCCGTCC 60.203 66.667 0.00 0.00 0.00 4.79
685 702 4.717629 TCAGCGTGGCGGTCTTCG 62.718 66.667 0.00 0.00 42.76 3.79
687 704 3.865929 CTGTCAGCGTGGCGGTCTT 62.866 63.158 0.00 0.00 34.62 3.01
712 729 4.221422 CCGATCCATCCACGCCGT 62.221 66.667 0.00 0.00 0.00 5.68
737 754 2.829458 GCTCGAGTACCCGCCTCT 60.829 66.667 15.13 0.00 0.00 3.69
755 801 2.582436 GCCGATCCAAACGAGGGA 59.418 61.111 0.00 0.00 39.14 4.20
760 806 3.564027 GAGGCGCCGATCCAAACG 61.564 66.667 23.20 0.00 0.00 3.60
777 823 1.154150 GCAACTAGCAAGCCAAGCG 60.154 57.895 0.00 0.00 44.79 4.68
800 846 0.386731 CACGGTTGCAACGGAATTCC 60.387 55.000 35.18 15.01 35.23 3.01
801 847 0.309612 ACACGGTTGCAACGGAATTC 59.690 50.000 35.18 15.88 35.23 2.17
802 848 0.030101 CACACGGTTGCAACGGAATT 59.970 50.000 35.18 19.49 35.23 2.17
803 849 1.652012 CACACGGTTGCAACGGAAT 59.348 52.632 35.18 22.44 35.23 3.01
804 850 2.473760 CCACACGGTTGCAACGGAA 61.474 57.895 35.18 0.00 35.23 4.30
805 851 2.897846 CCACACGGTTGCAACGGA 60.898 61.111 35.18 0.00 35.23 4.69
806 852 4.622456 GCCACACGGTTGCAACGG 62.622 66.667 29.25 29.25 35.23 4.44
807 853 3.402691 TTGCCACACGGTTGCAACG 62.403 57.895 22.67 19.11 38.84 4.10
819 865 3.308438 TTAACTAGTCGGAGTTGCCAC 57.692 47.619 0.00 0.00 39.96 5.01
838 884 3.131252 AGGAAGGTAAGGTATGGCCATT 58.869 45.455 26.37 9.33 40.61 3.16
839 885 2.711547 GAGGAAGGTAAGGTATGGCCAT 59.288 50.000 24.45 24.45 40.61 4.40
840 886 2.124411 GAGGAAGGTAAGGTATGGCCA 58.876 52.381 8.56 8.56 40.61 5.36
841 887 2.369203 GAGAGGAAGGTAAGGTATGGCC 59.631 54.545 0.00 0.00 37.58 5.36
842 888 3.070302 CAGAGAGGAAGGTAAGGTATGGC 59.930 52.174 0.00 0.00 0.00 4.40
843 889 3.070302 GCAGAGAGGAAGGTAAGGTATGG 59.930 52.174 0.00 0.00 0.00 2.74
844 890 3.070302 GGCAGAGAGGAAGGTAAGGTATG 59.930 52.174 0.00 0.00 0.00 2.39
845 891 3.051727 AGGCAGAGAGGAAGGTAAGGTAT 60.052 47.826 0.00 0.00 0.00 2.73
846 892 2.315155 AGGCAGAGAGGAAGGTAAGGTA 59.685 50.000 0.00 0.00 0.00 3.08
847 893 1.079658 AGGCAGAGAGGAAGGTAAGGT 59.920 52.381 0.00 0.00 0.00 3.50
850 896 2.766828 GCTAAGGCAGAGAGGAAGGTAA 59.233 50.000 0.00 0.00 38.54 2.85
860 906 0.393537 CCTTGGTGGCTAAGGCAGAG 60.394 60.000 0.00 0.00 39.19 3.35
864 910 0.965866 GGAACCTTGGTGGCTAAGGC 60.966 60.000 10.55 0.00 46.89 4.35
931 978 1.605232 GGGTCGTTTGATCCGTGTTTT 59.395 47.619 0.00 0.00 35.15 2.43
932 979 1.232119 GGGTCGTTTGATCCGTGTTT 58.768 50.000 0.00 0.00 35.15 2.83
948 995 0.325390 TTTGGGTGTTTTTCCGGGGT 60.325 50.000 0.00 0.00 0.00 4.95
991 1039 1.749258 GCCCGTCCATGTTCTTCCC 60.749 63.158 0.00 0.00 0.00 3.97
992 1040 1.002624 TGCCCGTCCATGTTCTTCC 60.003 57.895 0.00 0.00 0.00 3.46
1032 1080 1.435515 GCGGAAGATCGAGCTGACT 59.564 57.895 2.80 0.00 0.00 3.41
1115 1170 2.499685 GTCCGTGGGGATTCTCGG 59.500 66.667 0.00 0.00 46.14 4.63
1163 1219 2.459442 GGCAGCAACAGAGCTAGCG 61.459 63.158 9.55 0.00 44.54 4.26
1199 1260 0.169009 GCACACTCCAGCGGAAATTC 59.831 55.000 0.00 0.00 0.00 2.17
1257 1318 0.738412 TAGAACTAACAAGCCGGCGC 60.738 55.000 23.20 0.00 0.00 6.53
1258 1319 1.278238 CTAGAACTAACAAGCCGGCG 58.722 55.000 23.20 10.77 0.00 6.46
1299 1360 3.099141 ACAAAATCCCCATGATGGTGAC 58.901 45.455 11.09 0.00 35.17 3.67
1300 1361 3.098377 CACAAAATCCCCATGATGGTGA 58.902 45.455 11.09 4.66 35.17 4.02
1301 1362 2.833338 ACACAAAATCCCCATGATGGTG 59.167 45.455 11.09 0.00 35.17 4.17
1302 1363 3.188880 ACACAAAATCCCCATGATGGT 57.811 42.857 11.09 0.00 35.17 3.55
1303 1364 4.255301 CAAACACAAAATCCCCATGATGG 58.745 43.478 3.98 3.98 37.25 3.51
1304 1365 4.255301 CCAAACACAAAATCCCCATGATG 58.745 43.478 0.00 0.00 32.68 3.07
1396 1459 4.661222 TGCTGAACATGATCCCTTAACAA 58.339 39.130 0.00 0.00 0.00 2.83
1397 1460 4.299586 TGCTGAACATGATCCCTTAACA 57.700 40.909 0.00 0.00 0.00 2.41
1469 1537 5.105513 TCAGTCAGATAATTGCCTTACGTGA 60.106 40.000 0.00 0.00 0.00 4.35
1470 1538 5.109210 TCAGTCAGATAATTGCCTTACGTG 58.891 41.667 0.00 0.00 0.00 4.49
1471 1539 5.339008 TCAGTCAGATAATTGCCTTACGT 57.661 39.130 0.00 0.00 0.00 3.57
1472 1540 6.479990 TCAATCAGTCAGATAATTGCCTTACG 59.520 38.462 0.00 0.00 35.39 3.18
1473 1541 7.519649 GCTCAATCAGTCAGATAATTGCCTTAC 60.520 40.741 0.00 0.00 35.39 2.34
1474 1542 6.484643 GCTCAATCAGTCAGATAATTGCCTTA 59.515 38.462 0.00 0.00 35.39 2.69
1475 1543 5.298777 GCTCAATCAGTCAGATAATTGCCTT 59.701 40.000 0.00 0.00 35.39 4.35
1476 1544 4.820716 GCTCAATCAGTCAGATAATTGCCT 59.179 41.667 0.00 0.00 35.39 4.75
1477 1545 4.023365 GGCTCAATCAGTCAGATAATTGCC 60.023 45.833 0.00 0.00 35.39 4.52
1479 1547 6.289834 AGAGGCTCAATCAGTCAGATAATTG 58.710 40.000 18.26 0.00 35.39 2.32
1480 1548 6.327104 AGAGAGGCTCAATCAGTCAGATAATT 59.673 38.462 18.26 0.00 35.39 1.40
1502 1575 3.675228 GCAAGGCAATTGGACATCAAGAG 60.675 47.826 7.72 0.00 39.47 2.85
1503 1576 2.231964 GCAAGGCAATTGGACATCAAGA 59.768 45.455 7.72 0.00 39.47 3.02
1513 1586 1.488093 CGCAAACGCAAGGCAATTG 59.512 52.632 0.00 0.00 46.39 2.32
1607 1686 2.632996 CCCCTACAATCCGCTGAGAATA 59.367 50.000 0.00 0.00 0.00 1.75
1623 1702 1.356398 GGTGACACCCAAATTCCCCTA 59.644 52.381 14.16 0.00 30.04 3.53
1678 1758 5.177511 TCGAATTAATAGATGAAAGCAGCGG 59.822 40.000 0.00 0.00 35.08 5.52
1679 1759 6.144563 TCTCGAATTAATAGATGAAAGCAGCG 59.855 38.462 0.00 0.00 35.08 5.18
1699 1779 6.313959 CGAAATAACAAAGATTCGTCTCGA 57.686 37.500 0.00 0.00 39.67 4.04
1708 1788 5.009610 ACACAGCCAACGAAATAACAAAGAT 59.990 36.000 0.00 0.00 0.00 2.40
1726 1858 2.391389 GGTGGCTTAGCGACACAGC 61.391 63.158 20.06 8.01 38.98 4.40
1732 1864 1.904287 AATGTTTGGTGGCTTAGCGA 58.096 45.000 0.00 0.00 0.00 4.93
1775 1907 9.254133 GATTTTGTCTCAGAATCAATAGATCGA 57.746 33.333 7.72 0.00 35.77 3.59
1776 1908 8.494347 GGATTTTGTCTCAGAATCAATAGATCG 58.506 37.037 12.59 0.00 36.91 3.69
1781 1913 8.868522 ACAAGGATTTTGTCTCAGAATCAATA 57.131 30.769 12.59 0.00 36.91 1.90
1798 1930 4.787534 AGGATTCAAGAGAGGACAAGGATT 59.212 41.667 0.00 0.00 0.00 3.01
1802 1934 4.940654 GGAAAGGATTCAAGAGAGGACAAG 59.059 45.833 0.00 0.00 37.29 3.16
1808 1940 4.566426 AGGTGGAAAGGATTCAAGAGAG 57.434 45.455 0.00 0.00 37.29 3.20
1812 1944 3.189287 CGTGAAGGTGGAAAGGATTCAAG 59.811 47.826 0.00 0.00 37.29 3.02
1829 1961 7.215719 AGCTTCACATATATAGTAGCGTGAA 57.784 36.000 11.43 11.43 40.12 3.18
1853 1985 8.673711 CAGAAAAATAATGGTTCATCGACCTAA 58.326 33.333 0.00 0.00 40.47 2.69
1857 1989 9.438291 CATACAGAAAAATAATGGTTCATCGAC 57.562 33.333 0.00 0.00 0.00 4.20
1877 2010 5.046087 TCCAGCTGGATATGGAATCATACAG 60.046 44.000 32.00 0.00 42.61 2.74
1896 2029 2.798499 GCATGATCAAGCACAATCCAGC 60.798 50.000 17.64 0.00 0.00 4.85
1897 2030 2.425668 TGCATGATCAAGCACAATCCAG 59.574 45.455 20.99 0.00 35.51 3.86
1939 2072 8.887036 TGAGACAAAAGTGCGTATGATAATAT 57.113 30.769 0.00 0.00 0.00 1.28
1946 2079 2.416547 CCCTGAGACAAAAGTGCGTATG 59.583 50.000 0.00 0.00 0.00 2.39
1947 2080 2.038557 ACCCTGAGACAAAAGTGCGTAT 59.961 45.455 0.00 0.00 0.00 3.06
1974 2107 0.250640 CAGCCTCAGCAACCTCTGTT 60.251 55.000 0.00 0.00 43.56 3.16
2119 2252 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2120 2253 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
2147 2280 9.953697 GTATGTCGTAGTCTATTTGAAATCTCT 57.046 33.333 0.00 0.00 0.00 3.10
2148 2281 8.893884 CGTATGTCGTAGTCTATTTGAAATCTC 58.106 37.037 0.00 0.00 34.52 2.75
2149 2282 7.861372 CCGTATGTCGTAGTCTATTTGAAATCT 59.139 37.037 0.00 0.00 37.94 2.40
2150 2283 7.859377 TCCGTATGTCGTAGTCTATTTGAAATC 59.141 37.037 0.00 0.00 37.94 2.17
2151 2284 7.709947 TCCGTATGTCGTAGTCTATTTGAAAT 58.290 34.615 0.00 0.00 37.94 2.17
2152 2285 7.087409 TCCGTATGTCGTAGTCTATTTGAAA 57.913 36.000 0.00 0.00 37.94 2.69
2153 2286 6.682423 TCCGTATGTCGTAGTCTATTTGAA 57.318 37.500 0.00 0.00 37.94 2.69
2154 2287 6.261603 ACATCCGTATGTCGTAGTCTATTTGA 59.738 38.462 0.00 0.00 42.92 2.69
2155 2288 6.436261 ACATCCGTATGTCGTAGTCTATTTG 58.564 40.000 0.00 0.00 42.92 2.32
2156 2289 6.630444 ACATCCGTATGTCGTAGTCTATTT 57.370 37.500 0.00 0.00 42.92 1.40
2157 2290 7.918536 ATACATCCGTATGTCGTAGTCTATT 57.081 36.000 0.00 0.00 42.92 1.73
2159 2292 9.741647 CTATATACATCCGTATGTCGTAGTCTA 57.258 37.037 0.00 0.00 42.92 2.59
2160 2293 8.473219 TCTATATACATCCGTATGTCGTAGTCT 58.527 37.037 0.00 0.00 42.92 3.24
2161 2294 8.538856 GTCTATATACATCCGTATGTCGTAGTC 58.461 40.741 0.00 0.00 42.92 2.59
2162 2295 8.037166 TGTCTATATACATCCGTATGTCGTAGT 58.963 37.037 0.00 0.00 42.92 2.73
2163 2296 8.416485 TGTCTATATACATCCGTATGTCGTAG 57.584 38.462 0.00 0.00 42.92 3.51
2164 2297 8.953368 ATGTCTATATACATCCGTATGTCGTA 57.047 34.615 0.00 0.00 42.92 3.43
2165 2298 7.860918 ATGTCTATATACATCCGTATGTCGT 57.139 36.000 0.00 0.00 42.92 4.34
2198 2331 6.148480 ACTGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
2199 2332 6.233434 ACTGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
2200 2333 6.734104 ACTGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
2201 2334 8.043113 ACATACTGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
2202 2335 6.883217 ACATACTGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
2203 2336 7.081526 ACATACTGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
2204 2337 7.826252 ACTACATACTGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
2205 2338 7.161404 ACTACATACTGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
2206 2339 6.701340 ACTACATACTGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
2207 2340 6.591448 TGACTACATACTGAGCAAAATGAGTG 59.409 38.462 0.00 0.00 0.00 3.51
2208 2341 6.591834 GTGACTACATACTGAGCAAAATGAGT 59.408 38.462 0.00 0.00 0.00 3.41
2209 2342 6.815641 AGTGACTACATACTGAGCAAAATGAG 59.184 38.462 0.00 0.00 0.00 2.90
2210 2343 6.701340 AGTGACTACATACTGAGCAAAATGA 58.299 36.000 0.00 0.00 0.00 2.57
2211 2344 6.974932 AGTGACTACATACTGAGCAAAATG 57.025 37.500 0.00 0.00 0.00 2.32
2212 2345 6.936900 ACAAGTGACTACATACTGAGCAAAAT 59.063 34.615 0.00 0.00 0.00 1.82
2213 2346 6.288294 ACAAGTGACTACATACTGAGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
2214 2347 5.853936 ACAAGTGACTACATACTGAGCAAA 58.146 37.500 0.00 0.00 0.00 3.68
2215 2348 5.468540 ACAAGTGACTACATACTGAGCAA 57.531 39.130 0.00 0.00 0.00 3.91
2216 2349 5.010617 TCAACAAGTGACTACATACTGAGCA 59.989 40.000 0.00 0.00 0.00 4.26
2217 2350 5.470368 TCAACAAGTGACTACATACTGAGC 58.530 41.667 0.00 0.00 0.00 4.26
2218 2351 7.946655 TTTCAACAAGTGACTACATACTGAG 57.053 36.000 0.00 0.00 35.39 3.35
2219 2352 8.367911 AGATTTCAACAAGTGACTACATACTGA 58.632 33.333 0.00 0.00 35.39 3.41
2220 2353 8.539770 AGATTTCAACAAGTGACTACATACTG 57.460 34.615 0.00 0.00 35.39 2.74
2221 2354 8.589338 AGAGATTTCAACAAGTGACTACATACT 58.411 33.333 0.00 0.00 35.39 2.12
2222 2355 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2224 2357 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2225 2358 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2226 2359 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2227 2360 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2228 2361 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2229 2362 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2230 2363 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2231 2364 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2232 2365 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2245 2378 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2246 2379 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2247 2380 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2248 2381 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2249 2382 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2250 2383 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2251 2384 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2252 2385 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2253 2386 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2254 2387 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2255 2388 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2256 2389 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2257 2390 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
2258 2391 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2259 2392 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2260 2393 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2261 2394 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2262 2395 3.525199 AGTACTACTCCCTCCGTTCCTAA 59.475 47.826 0.00 0.00 0.00 2.69
2263 2396 3.118531 AGTACTACTCCCTCCGTTCCTA 58.881 50.000 0.00 0.00 0.00 2.94
2264 2397 1.921748 AGTACTACTCCCTCCGTTCCT 59.078 52.381 0.00 0.00 0.00 3.36
2265 2398 2.433662 AGTACTACTCCCTCCGTTCC 57.566 55.000 0.00 0.00 0.00 3.62
2266 2399 6.770303 ACTATTAAGTACTACTCCCTCCGTTC 59.230 42.308 0.00 0.00 32.84 3.95
2267 2400 6.667661 ACTATTAAGTACTACTCCCTCCGTT 58.332 40.000 0.00 0.00 32.84 4.44
2268 2401 6.259346 ACTATTAAGTACTACTCCCTCCGT 57.741 41.667 0.00 0.00 32.84 4.69
2269 2402 7.579761 AAACTATTAAGTACTACTCCCTCCG 57.420 40.000 0.00 0.00 33.75 4.63
2339 2473 7.926555 CACCCATATCTTGGTAGTAAAGTACTG 59.073 40.741 0.00 0.00 44.83 2.74
2344 2478 7.335627 TGAACACCCATATCTTGGTAGTAAAG 58.664 38.462 0.00 0.00 44.83 1.85
2346 2480 6.877668 TGAACACCCATATCTTGGTAGTAA 57.122 37.500 0.00 0.00 44.83 2.24
2351 2491 4.474651 TGAGATGAACACCCATATCTTGGT 59.525 41.667 0.00 0.00 44.83 3.67
2362 2502 8.822652 AATTTTCAGAAAATGAGATGAACACC 57.177 30.769 19.78 0.00 40.05 4.16
2391 2532 7.944061 TCACCAAGGAATATGCATTATTTCAG 58.056 34.615 3.54 1.30 29.19 3.02
2803 2944 1.227853 GTGACGGGGCTGTTGAAGT 60.228 57.895 0.00 0.00 0.00 3.01
2836 2978 9.040939 TGGAAATCACATATTAATGACACTACG 57.959 33.333 0.00 0.00 36.54 3.51
2900 3042 2.691409 TTGAAAGCCTAGGATGACCG 57.309 50.000 14.75 0.00 41.83 4.79
2902 3044 4.036144 GCAAGATTGAAAGCCTAGGATGAC 59.964 45.833 14.75 4.77 0.00 3.06
2916 3058 7.379750 TGATTCAAATGAATGTGCAAGATTGA 58.620 30.769 13.08 0.00 44.14 2.57
2919 3061 6.312918 GCTTGATTCAAATGAATGTGCAAGAT 59.687 34.615 25.11 1.65 44.14 2.40
2981 3123 6.651225 AGTTCAGATAGGAAAAGTACAAGTGC 59.349 38.462 0.00 0.00 0.00 4.40
3020 3162 2.086869 ACAAATCATGAGTTCTGCCCG 58.913 47.619 5.22 0.00 0.00 6.13
3190 3332 6.688813 GGTAGCGAGAAATGAAATGATTTGTC 59.311 38.462 0.00 0.00 34.04 3.18
3194 3336 6.543465 TGATGGTAGCGAGAAATGAAATGATT 59.457 34.615 0.00 0.00 0.00 2.57
3291 3433 4.908481 AGACAGACCCCTTTAAACTCTCTT 59.092 41.667 0.00 0.00 0.00 2.85
3298 3440 4.020485 GTGCTCTAGACAGACCCCTTTAAA 60.020 45.833 0.00 0.00 0.00 1.52
3299 3441 3.514309 GTGCTCTAGACAGACCCCTTTAA 59.486 47.826 0.00 0.00 0.00 1.52
3300 3442 3.097614 GTGCTCTAGACAGACCCCTTTA 58.902 50.000 0.00 0.00 0.00 1.85
3301 3443 1.903183 GTGCTCTAGACAGACCCCTTT 59.097 52.381 0.00 0.00 0.00 3.11
3302 3444 1.562783 GTGCTCTAGACAGACCCCTT 58.437 55.000 0.00 0.00 0.00 3.95
3303 3445 0.681564 CGTGCTCTAGACAGACCCCT 60.682 60.000 0.00 0.00 0.00 4.79
3304 3446 0.680280 TCGTGCTCTAGACAGACCCC 60.680 60.000 0.00 0.00 0.00 4.95
3305 3447 1.174783 TTCGTGCTCTAGACAGACCC 58.825 55.000 0.00 0.00 0.00 4.46
3306 3448 2.685897 AGATTCGTGCTCTAGACAGACC 59.314 50.000 0.00 0.00 0.00 3.85
3307 3449 4.364415 AAGATTCGTGCTCTAGACAGAC 57.636 45.455 0.00 0.00 0.00 3.51
3308 3450 4.035792 GCTAAGATTCGTGCTCTAGACAGA 59.964 45.833 0.00 0.00 0.00 3.41
3309 3451 4.286910 GCTAAGATTCGTGCTCTAGACAG 58.713 47.826 0.00 0.00 0.00 3.51
3310 3452 3.242772 CGCTAAGATTCGTGCTCTAGACA 60.243 47.826 0.00 0.00 0.00 3.41
3311 3453 3.293262 CGCTAAGATTCGTGCTCTAGAC 58.707 50.000 0.00 0.00 0.00 2.59
3312 3454 2.287069 GCGCTAAGATTCGTGCTCTAGA 60.287 50.000 0.00 0.00 34.05 2.43
3313 3455 2.047769 GCGCTAAGATTCGTGCTCTAG 58.952 52.381 0.00 0.00 34.05 2.43
3314 3456 1.404035 TGCGCTAAGATTCGTGCTCTA 59.596 47.619 9.73 0.00 37.53 2.43
3315 3457 0.173481 TGCGCTAAGATTCGTGCTCT 59.827 50.000 9.73 0.00 37.53 4.09
3316 3458 0.999406 TTGCGCTAAGATTCGTGCTC 59.001 50.000 9.73 0.00 37.53 4.26
3317 3459 1.438651 TTTGCGCTAAGATTCGTGCT 58.561 45.000 9.73 0.00 37.53 4.40
3318 3460 2.241259 TTTTGCGCTAAGATTCGTGC 57.759 45.000 9.73 0.00 37.18 5.34
3319 3461 4.002267 TGATTTTGCGCTAAGATTCGTG 57.998 40.909 9.73 0.00 0.00 4.35
3320 3462 4.678509 TTGATTTTGCGCTAAGATTCGT 57.321 36.364 9.73 0.00 0.00 3.85
3321 3463 5.170270 GTCATTGATTTTGCGCTAAGATTCG 59.830 40.000 9.73 0.00 0.00 3.34
3322 3464 6.029607 TGTCATTGATTTTGCGCTAAGATTC 58.970 36.000 9.73 6.63 0.00 2.52
3323 3465 5.953183 TGTCATTGATTTTGCGCTAAGATT 58.047 33.333 9.73 0.00 0.00 2.40
3324 3466 5.565592 TGTCATTGATTTTGCGCTAAGAT 57.434 34.783 9.73 4.01 0.00 2.40
3325 3467 5.565592 ATGTCATTGATTTTGCGCTAAGA 57.434 34.783 9.73 0.00 0.00 2.10
3326 3468 5.911280 CCTATGTCATTGATTTTGCGCTAAG 59.089 40.000 9.73 0.00 0.00 2.18
3327 3469 5.588246 TCCTATGTCATTGATTTTGCGCTAA 59.412 36.000 9.73 3.97 0.00 3.09
3328 3470 5.007626 GTCCTATGTCATTGATTTTGCGCTA 59.992 40.000 9.73 0.00 0.00 4.26
3329 3471 3.947196 TCCTATGTCATTGATTTTGCGCT 59.053 39.130 9.73 0.00 0.00 5.92
3330 3472 4.037690 GTCCTATGTCATTGATTTTGCGC 58.962 43.478 0.00 0.00 0.00 6.09
3331 3473 5.065090 TGAGTCCTATGTCATTGATTTTGCG 59.935 40.000 0.00 0.00 0.00 4.85
3332 3474 6.317140 TCTGAGTCCTATGTCATTGATTTTGC 59.683 38.462 0.00 0.00 0.00 3.68
3333 3475 7.854557 TCTGAGTCCTATGTCATTGATTTTG 57.145 36.000 0.00 0.00 0.00 2.44
3334 3476 8.051535 ACATCTGAGTCCTATGTCATTGATTTT 58.948 33.333 0.00 0.00 0.00 1.82
3335 3477 7.498239 CACATCTGAGTCCTATGTCATTGATTT 59.502 37.037 4.84 0.00 31.60 2.17
3336 3478 6.990939 CACATCTGAGTCCTATGTCATTGATT 59.009 38.462 4.84 0.00 31.60 2.57
3337 3479 6.522946 CACATCTGAGTCCTATGTCATTGAT 58.477 40.000 4.84 0.00 31.60 2.57
3338 3480 5.683249 GCACATCTGAGTCCTATGTCATTGA 60.683 44.000 4.84 0.00 31.60 2.57
3339 3481 4.510711 GCACATCTGAGTCCTATGTCATTG 59.489 45.833 4.84 0.00 31.60 2.82
3340 3482 4.162888 TGCACATCTGAGTCCTATGTCATT 59.837 41.667 4.84 0.00 31.60 2.57
3341 3483 3.708121 TGCACATCTGAGTCCTATGTCAT 59.292 43.478 4.84 0.00 31.60 3.06
3342 3484 3.099141 TGCACATCTGAGTCCTATGTCA 58.901 45.455 4.84 4.62 31.60 3.58
3343 3485 3.808466 TGCACATCTGAGTCCTATGTC 57.192 47.619 4.84 2.68 31.60 3.06
3344 3486 4.767578 ATTGCACATCTGAGTCCTATGT 57.232 40.909 0.00 2.43 34.22 2.29
3345 3487 5.851720 AGTATTGCACATCTGAGTCCTATG 58.148 41.667 0.00 1.32 0.00 2.23
3346 3488 6.491714 AAGTATTGCACATCTGAGTCCTAT 57.508 37.500 0.00 0.00 0.00 2.57
3347 3489 5.939764 AAGTATTGCACATCTGAGTCCTA 57.060 39.130 0.00 0.00 0.00 2.94
3348 3490 4.833478 AAGTATTGCACATCTGAGTCCT 57.167 40.909 0.00 0.00 0.00 3.85
3349 3491 6.457528 GCTTTAAGTATTGCACATCTGAGTCC 60.458 42.308 0.00 0.00 0.00 3.85
3350 3492 6.092670 TGCTTTAAGTATTGCACATCTGAGTC 59.907 38.462 0.00 0.00 0.00 3.36
3351 3493 5.939883 TGCTTTAAGTATTGCACATCTGAGT 59.060 36.000 0.00 0.00 0.00 3.41
3352 3494 6.426980 TGCTTTAAGTATTGCACATCTGAG 57.573 37.500 0.00 0.00 0.00 3.35
3360 3502 8.146479 CATCTAGATGTGCTTTAAGTATTGCA 57.854 34.615 22.42 0.00 34.23 4.08
3381 3523 9.034361 AAACTCCAGTTTTGCTAAAGCACATCT 62.034 37.037 3.66 0.02 45.07 2.90
3382 3524 6.956371 AAACTCCAGTTTTGCTAAAGCACATC 60.956 38.462 3.66 0.00 45.07 3.06
3383 3525 5.163416 AAACTCCAGTTTTGCTAAAGCACAT 60.163 36.000 3.66 0.00 45.07 3.21
3384 3526 4.159506 AAACTCCAGTTTTGCTAAAGCACA 59.840 37.500 3.66 0.00 45.07 4.57
3385 3527 4.682787 AAACTCCAGTTTTGCTAAAGCAC 58.317 39.130 3.66 0.00 45.07 4.40
3386 3528 6.458232 TTAAACTCCAGTTTTGCTAAAGCA 57.542 33.333 9.92 0.00 45.07 3.91
3387 3529 7.438160 ACATTTAAACTCCAGTTTTGCTAAAGC 59.562 33.333 9.92 0.00 45.07 3.51
3388 3530 8.871686 ACATTTAAACTCCAGTTTTGCTAAAG 57.128 30.769 9.92 3.04 45.07 1.85
3392 3534 8.860088 AGATAACATTTAAACTCCAGTTTTGCT 58.140 29.630 9.92 0.00 45.07 3.91
3393 3535 9.476202 AAGATAACATTTAAACTCCAGTTTTGC 57.524 29.630 9.92 0.00 45.07 3.68
3633 6542 9.355215 AGACTAAACATAACGAGTCAAACTATG 57.645 33.333 3.92 0.00 40.67 2.23
3684 6596 2.097825 GCCTCAAATTCAGGAGCATGT 58.902 47.619 7.47 0.00 31.91 3.21
3755 6667 3.149196 CAAAGTAAGAGCTTGCCTCCAA 58.851 45.455 0.00 0.00 41.74 3.53
3829 6755 6.669278 TGTGCATTCGTCTATATAGTCTGAC 58.331 40.000 9.58 0.00 0.00 3.51
3844 6770 7.170773 CAGAAATCAAAATCATTGTGCATTCG 58.829 34.615 0.00 0.00 0.00 3.34
3854 6780 7.974501 GTCTGAGATTGCAGAAATCAAAATCAT 59.025 33.333 3.78 0.00 46.21 2.45
3856 6782 7.536855 AGTCTGAGATTGCAGAAATCAAAATC 58.463 34.615 3.78 0.00 46.21 2.17
3912 6839 9.146984 TGACATGTACAGTAAATAGTAGCAAAC 57.853 33.333 0.00 0.00 0.00 2.93
3995 6922 6.983474 TTCGAGATCTTATGCATTTCAACA 57.017 33.333 3.54 0.00 0.00 3.33
4004 6931 8.602328 CCATGATTAGATTTCGAGATCTTATGC 58.398 37.037 22.06 12.97 37.54 3.14
4201 7130 7.174946 TGTGTCATTTGGATCCTTCTTAACTTC 59.825 37.037 14.23 3.79 0.00 3.01
4207 7136 7.890127 TCTTAATGTGTCATTTGGATCCTTCTT 59.110 33.333 14.23 0.00 0.00 2.52
4253 7184 2.049248 GCATGGCCCAACGTTGTG 60.049 61.111 25.63 16.81 0.00 3.33
4254 7185 1.876497 GATGCATGGCCCAACGTTGT 61.876 55.000 25.63 5.00 0.00 3.32
4255 7186 1.153784 GATGCATGGCCCAACGTTG 60.154 57.895 21.47 21.47 0.00 4.10
4258 7204 2.440796 AGGATGCATGGCCCAACG 60.441 61.111 2.46 0.00 0.00 4.10
4280 7226 7.550551 ACAGATCACAAGTGGTATGTCAAATAG 59.449 37.037 7.84 0.00 41.78 1.73
4311 7257 6.811954 TGTTAATTCTTCCAAAGGAACCAAC 58.188 36.000 0.00 0.00 36.71 3.77
4312 7258 7.288852 TCATGTTAATTCTTCCAAAGGAACCAA 59.711 33.333 0.00 0.00 36.71 3.67
4342 7288 7.922278 TCATACCATCTGCATTTAAAAATCAGC 59.078 33.333 0.00 0.00 0.00 4.26
4348 7294 6.985645 GCCAATCATACCATCTGCATTTAAAA 59.014 34.615 0.00 0.00 0.00 1.52
4467 7413 3.378911 TCATCTTATTCGCCGCATACA 57.621 42.857 0.00 0.00 0.00 2.29
4476 7422 8.754230 TCTTGCTCATCTAATCATCTTATTCG 57.246 34.615 0.00 0.00 0.00 3.34
4502 7448 5.869350 AGATTACGCAACTTTACATCAAGC 58.131 37.500 0.00 0.00 0.00 4.01
4533 7479 0.806868 CGCACATGGTTCTTGCTCAT 59.193 50.000 0.00 0.00 33.90 2.90
4534 7480 1.855213 GCGCACATGGTTCTTGCTCA 61.855 55.000 0.30 0.00 33.90 4.26
4535 7481 1.154150 GCGCACATGGTTCTTGCTC 60.154 57.895 0.30 0.00 33.90 4.26
4536 7482 1.898094 TGCGCACATGGTTCTTGCT 60.898 52.632 5.66 0.00 33.90 3.91
4537 7483 1.730547 GTGCGCACATGGTTCTTGC 60.731 57.895 34.52 2.71 0.00 4.01
4539 7485 1.890876 TAAGTGCGCACATGGTTCTT 58.109 45.000 39.21 25.21 0.00 2.52
4540 7486 2.009774 GATAAGTGCGCACATGGTTCT 58.990 47.619 39.21 18.95 0.00 3.01
4542 7488 1.094785 GGATAAGTGCGCACATGGTT 58.905 50.000 39.21 26.93 0.00 3.67
4544 7490 1.382522 AAGGATAAGTGCGCACATGG 58.617 50.000 39.21 0.00 0.00 3.66
4598 7552 2.621338 ACATGACAACTCATAGTGCGG 58.379 47.619 0.00 0.00 35.17 5.69
4612 7566 4.860907 ACGGTAGAAATGTCGTAACATGAC 59.139 41.667 0.00 0.00 45.48 3.06
4630 7584 2.299867 GGGGTAAAAGTGTCTGACGGTA 59.700 50.000 2.98 0.00 0.00 4.02
4637 7591 0.404426 GGGCAGGGGTAAAAGTGTCT 59.596 55.000 0.00 0.00 0.00 3.41
4638 7592 0.404426 AGGGCAGGGGTAAAAGTGTC 59.596 55.000 0.00 0.00 0.00 3.67
4639 7593 1.353358 GTAGGGCAGGGGTAAAAGTGT 59.647 52.381 0.00 0.00 0.00 3.55
4640 7594 1.633945 AGTAGGGCAGGGGTAAAAGTG 59.366 52.381 0.00 0.00 0.00 3.16
4641 7595 1.633945 CAGTAGGGCAGGGGTAAAAGT 59.366 52.381 0.00 0.00 0.00 2.66
4642 7596 1.913419 TCAGTAGGGCAGGGGTAAAAG 59.087 52.381 0.00 0.00 0.00 2.27
4643 7597 2.047769 TCAGTAGGGCAGGGGTAAAA 57.952 50.000 0.00 0.00 0.00 1.52
4644 7598 2.280308 ATCAGTAGGGCAGGGGTAAA 57.720 50.000 0.00 0.00 0.00 2.01
4645 7599 2.520980 TCTATCAGTAGGGCAGGGGTAA 59.479 50.000 0.00 0.00 0.00 2.85
4646 7600 2.149556 TCTATCAGTAGGGCAGGGGTA 58.850 52.381 0.00 0.00 0.00 3.69
4647 7601 0.941963 TCTATCAGTAGGGCAGGGGT 59.058 55.000 0.00 0.00 0.00 4.95
4648 7602 1.974236 CTTCTATCAGTAGGGCAGGGG 59.026 57.143 0.00 0.00 0.00 4.79
4649 7603 2.964209 TCTTCTATCAGTAGGGCAGGG 58.036 52.381 0.00 0.00 0.00 4.45
4650 7604 4.802248 GCATTCTTCTATCAGTAGGGCAGG 60.802 50.000 0.00 0.00 0.00 4.85
4651 7605 4.202295 TGCATTCTTCTATCAGTAGGGCAG 60.202 45.833 0.00 0.00 0.00 4.85
4652 7606 3.711190 TGCATTCTTCTATCAGTAGGGCA 59.289 43.478 0.00 0.00 0.00 5.36
4653 7607 4.342862 TGCATTCTTCTATCAGTAGGGC 57.657 45.455 0.00 0.00 0.00 5.19
4654 7608 5.862845 ACATGCATTCTTCTATCAGTAGGG 58.137 41.667 0.00 0.00 0.00 3.53
4655 7609 8.893219 TTAACATGCATTCTTCTATCAGTAGG 57.107 34.615 0.00 0.00 0.00 3.18
4656 7610 8.494347 GCTTAACATGCATTCTTCTATCAGTAG 58.506 37.037 0.00 0.00 0.00 2.57
4657 7611 8.206867 AGCTTAACATGCATTCTTCTATCAGTA 58.793 33.333 0.00 0.00 0.00 2.74
4658 7612 7.052873 AGCTTAACATGCATTCTTCTATCAGT 58.947 34.615 0.00 0.00 0.00 3.41
4659 7613 7.493743 AGCTTAACATGCATTCTTCTATCAG 57.506 36.000 0.00 0.00 0.00 2.90
4660 7614 8.962884 TTAGCTTAACATGCATTCTTCTATCA 57.037 30.769 0.00 0.00 0.00 2.15
4664 7618 6.501781 GCATTAGCTTAACATGCATTCTTCT 58.498 36.000 0.00 0.00 42.49 2.85
4717 7671 7.828717 TGCTTGTAAGATGGATTATCAGAACAA 59.171 33.333 0.00 0.00 38.31 2.83
4719 7673 7.792374 TGCTTGTAAGATGGATTATCAGAAC 57.208 36.000 0.00 0.00 38.31 3.01
4805 7764 0.677731 CCATTTCTCGCCTCAAGCCA 60.678 55.000 0.00 0.00 38.78 4.75
4807 7766 1.936547 CTACCATTTCTCGCCTCAAGC 59.063 52.381 0.00 0.00 38.52 4.01
4808 7767 3.526931 TCTACCATTTCTCGCCTCAAG 57.473 47.619 0.00 0.00 0.00 3.02
4809 7768 3.973206 TTCTACCATTTCTCGCCTCAA 57.027 42.857 0.00 0.00 0.00 3.02
4810 7769 5.808366 ATATTCTACCATTTCTCGCCTCA 57.192 39.130 0.00 0.00 0.00 3.86
4811 7770 7.355778 CAAAATATTCTACCATTTCTCGCCTC 58.644 38.462 0.00 0.00 0.00 4.70
4823 7782 7.266922 TGCGGAAATACCAAAATATTCTACC 57.733 36.000 0.00 0.00 38.90 3.18
4824 7783 8.784043 AGATGCGGAAATACCAAAATATTCTAC 58.216 33.333 0.00 0.00 38.90 2.59
4826 7785 7.502226 TCAGATGCGGAAATACCAAAATATTCT 59.498 33.333 0.00 0.00 38.90 2.40
4827 7786 7.648142 TCAGATGCGGAAATACCAAAATATTC 58.352 34.615 0.00 0.00 38.90 1.75
4828 7787 7.581213 TCAGATGCGGAAATACCAAAATATT 57.419 32.000 0.00 0.00 38.90 1.28
4829 7788 7.765695 ATCAGATGCGGAAATACCAAAATAT 57.234 32.000 0.00 0.00 38.90 1.28
4830 7789 8.684386 TTATCAGATGCGGAAATACCAAAATA 57.316 30.769 0.00 0.00 38.90 1.40
4831 7790 7.581213 TTATCAGATGCGGAAATACCAAAAT 57.419 32.000 0.00 0.00 38.90 1.82
4845 7804 4.604976 AGAAGCGCAATTTTATCAGATGC 58.395 39.130 11.47 0.00 0.00 3.91
4851 7810 9.831737 ATCATATTGTAGAAGCGCAATTTTATC 57.168 29.630 11.47 0.00 36.75 1.75
4857 7816 6.128090 CCATCATCATATTGTAGAAGCGCAAT 60.128 38.462 11.47 1.27 38.63 3.56
4866 7825 7.210718 ACATTGTGCCATCATCATATTGTAG 57.789 36.000 0.00 0.00 0.00 2.74
4873 7832 2.696707 GGGAACATTGTGCCATCATCAT 59.303 45.455 15.93 0.00 31.39 2.45
4880 7839 1.489481 TTGTTGGGAACATTGTGCCA 58.511 45.000 15.93 5.85 41.79 4.92
4881 7840 2.209273 GTTTGTTGGGAACATTGTGCC 58.791 47.619 5.09 5.09 41.79 5.01
4882 7841 2.898705 TGTTTGTTGGGAACATTGTGC 58.101 42.857 0.00 0.00 41.79 4.57
4883 7842 4.248859 TGTTGTTTGTTGGGAACATTGTG 58.751 39.130 0.00 0.00 41.79 3.33
4885 7844 5.114780 TCATGTTGTTTGTTGGGAACATTG 58.885 37.500 0.00 0.00 41.79 2.82
4886 7845 5.350504 TCATGTTGTTTGTTGGGAACATT 57.649 34.783 0.00 0.00 41.79 2.71
4887 7846 5.070180 TGATCATGTTGTTTGTTGGGAACAT 59.930 36.000 0.00 0.00 41.79 2.71
4889 7848 4.942852 TGATCATGTTGTTTGTTGGGAAC 58.057 39.130 0.00 0.00 0.00 3.62
4890 7849 5.539574 AGATGATCATGTTGTTTGTTGGGAA 59.460 36.000 14.30 0.00 0.00 3.97
4891 7850 5.078949 AGATGATCATGTTGTTTGTTGGGA 58.921 37.500 14.30 0.00 0.00 4.37
4916 7879 7.178274 TGGTGTTTGCATCAAATAAAGGTCTAT 59.822 33.333 0.00 0.00 35.74 1.98
4937 7900 7.337942 GGAGTGAAGATTGAAAGATATTGGTGT 59.662 37.037 0.00 0.00 0.00 4.16
4972 7971 5.387113 ACATGGATATCTTGTTGGCCTTA 57.613 39.130 3.32 0.00 30.70 2.69
5134 8133 5.246429 GGTTATCAGGTACTCCATCTTAGGG 59.754 48.000 0.00 0.00 34.60 3.53
5162 8161 0.039978 AGCTCTGTGTTCGTCACTCG 60.040 55.000 12.67 6.23 46.27 4.18
5163 8162 2.141535 AAGCTCTGTGTTCGTCACTC 57.858 50.000 12.67 0.40 46.27 3.51
5165 8164 1.714460 CGTAAGCTCTGTGTTCGTCAC 59.286 52.381 0.00 6.56 46.31 3.67
5166 8165 1.335810 ACGTAAGCTCTGTGTTCGTCA 59.664 47.619 0.00 0.00 45.62 4.35
5167 8166 2.047679 ACGTAAGCTCTGTGTTCGTC 57.952 50.000 0.00 0.00 45.62 4.20
5207 8208 2.766263 TGCTCCGGTGAGAGTTGAATAT 59.234 45.455 7.92 0.00 41.42 1.28
5208 8209 2.166459 CTGCTCCGGTGAGAGTTGAATA 59.834 50.000 7.92 0.00 41.42 1.75
5209 8210 0.976641 TGCTCCGGTGAGAGTTGAAT 59.023 50.000 7.92 0.00 41.42 2.57
5210 8211 0.318441 CTGCTCCGGTGAGAGTTGAA 59.682 55.000 7.92 0.00 41.42 2.69
5214 8215 1.228583 TCACTGCTCCGGTGAGAGT 60.229 57.895 7.92 5.29 43.73 3.24
5222 8223 1.002684 GAGGTACGTATCACTGCTCCG 60.003 57.143 8.86 0.00 0.00 4.63
5223 8224 2.033550 CAGAGGTACGTATCACTGCTCC 59.966 54.545 18.33 3.65 0.00 4.70
5224 8225 2.541999 GCAGAGGTACGTATCACTGCTC 60.542 54.545 36.01 18.52 44.51 4.26
5226 8227 1.841450 GCAGAGGTACGTATCACTGC 58.159 55.000 32.57 32.57 42.44 4.40
5227 8228 1.669265 TCGCAGAGGTACGTATCACTG 59.331 52.381 23.91 23.91 0.00 3.66
5228 8229 2.034104 TCGCAGAGGTACGTATCACT 57.966 50.000 8.86 4.04 0.00 3.41
5246 8286 4.067896 TCACATCTCCTGAAAAGCACTTC 58.932 43.478 0.00 0.00 0.00 3.01
5247 8287 4.070716 CTCACATCTCCTGAAAAGCACTT 58.929 43.478 0.00 0.00 0.00 3.16
5335 8375 2.122564 GAAGCTTCTTGTTGTTGCTGC 58.877 47.619 19.44 0.00 33.96 5.25
5338 8378 3.427161 ACTGAAGCTTCTTGTTGTTGC 57.573 42.857 26.09 0.00 0.00 4.17
5344 8384 3.281727 TGGTGAACTGAAGCTTCTTGT 57.718 42.857 26.09 20.60 0.00 3.16
5347 8387 3.571401 CCAATTGGTGAACTGAAGCTTCT 59.429 43.478 26.09 7.23 0.00 2.85
5348 8388 3.569701 TCCAATTGGTGAACTGAAGCTTC 59.430 43.478 23.76 19.89 36.34 3.86
5349 8389 3.565307 TCCAATTGGTGAACTGAAGCTT 58.435 40.909 23.76 0.00 36.34 3.74
5350 8390 3.228188 TCCAATTGGTGAACTGAAGCT 57.772 42.857 23.76 0.00 36.34 3.74
5351 8391 3.119352 GGATCCAATTGGTGAACTGAAGC 60.119 47.826 23.76 4.85 36.34 3.86
5352 8392 3.127548 CGGATCCAATTGGTGAACTGAAG 59.872 47.826 23.76 4.12 36.34 3.02
5353 8393 3.081061 CGGATCCAATTGGTGAACTGAA 58.919 45.455 23.76 2.38 36.34 3.02
5354 8394 2.039746 ACGGATCCAATTGGTGAACTGA 59.960 45.455 23.76 3.17 36.34 3.41
5355 8395 2.162208 CACGGATCCAATTGGTGAACTG 59.838 50.000 23.76 18.25 36.34 3.16
5356 8396 2.039746 TCACGGATCCAATTGGTGAACT 59.960 45.455 23.76 5.31 34.94 3.01
5357 8397 2.432444 TCACGGATCCAATTGGTGAAC 58.568 47.619 23.76 12.90 34.94 3.18
5358 8398 2.869101 TCACGGATCCAATTGGTGAA 57.131 45.000 23.76 5.54 34.94 3.18
5359 8399 2.869101 TTCACGGATCCAATTGGTGA 57.131 45.000 23.76 16.34 35.97 4.02
5360 8400 2.099592 CCATTCACGGATCCAATTGGTG 59.900 50.000 23.76 14.28 36.34 4.17
5361 8401 2.378038 CCATTCACGGATCCAATTGGT 58.622 47.619 23.76 11.51 36.34 3.67
5362 8402 1.682854 CCCATTCACGGATCCAATTGG 59.317 52.381 19.08 19.08 0.00 3.16
5363 8403 2.653726 TCCCATTCACGGATCCAATTG 58.346 47.619 13.41 5.60 0.00 2.32
5364 8404 3.600448 ATCCCATTCACGGATCCAATT 57.400 42.857 13.41 0.00 34.98 2.32
5365 8405 3.652869 AGTATCCCATTCACGGATCCAAT 59.347 43.478 13.41 0.85 40.66 3.16
5366 8406 3.045634 AGTATCCCATTCACGGATCCAA 58.954 45.455 13.41 0.00 40.66 3.53
5367 8407 2.689658 AGTATCCCATTCACGGATCCA 58.310 47.619 13.41 0.00 40.66 3.41
5368 8408 3.071023 TCAAGTATCCCATTCACGGATCC 59.929 47.826 0.00 0.00 40.66 3.36
5369 8409 4.336889 TCAAGTATCCCATTCACGGATC 57.663 45.455 0.00 0.00 40.66 3.36
5370 8410 4.982241 ATCAAGTATCCCATTCACGGAT 57.018 40.909 0.00 0.00 42.84 4.18
5371 8411 5.144832 TCTATCAAGTATCCCATTCACGGA 58.855 41.667 0.00 0.00 0.00 4.69
5372 8412 5.468540 TCTATCAAGTATCCCATTCACGG 57.531 43.478 0.00 0.00 0.00 4.94
5385 8425 9.482175 GGAAGGAGTGGTATATATCTATCAAGT 57.518 37.037 0.00 0.00 0.00 3.16
5386 8426 9.480861 TGGAAGGAGTGGTATATATCTATCAAG 57.519 37.037 0.00 0.00 0.00 3.02
5391 8431 8.967918 CGAAATGGAAGGAGTGGTATATATCTA 58.032 37.037 0.00 0.00 0.00 1.98
5392 8432 7.674348 TCGAAATGGAAGGAGTGGTATATATCT 59.326 37.037 0.00 0.00 0.00 1.98
5393 8433 7.837863 TCGAAATGGAAGGAGTGGTATATATC 58.162 38.462 0.00 0.00 0.00 1.63
5394 8434 7.792364 TCGAAATGGAAGGAGTGGTATATAT 57.208 36.000 0.00 0.00 0.00 0.86
5395 8435 7.606135 TTCGAAATGGAAGGAGTGGTATATA 57.394 36.000 0.00 0.00 0.00 0.86
5396 8436 6.494666 TTCGAAATGGAAGGAGTGGTATAT 57.505 37.500 0.00 0.00 0.00 0.86
5397 8437 5.943349 TTCGAAATGGAAGGAGTGGTATA 57.057 39.130 0.00 0.00 0.00 1.47
5398 8438 4.837093 TTCGAAATGGAAGGAGTGGTAT 57.163 40.909 0.00 0.00 0.00 2.73
5399 8439 4.837093 ATTCGAAATGGAAGGAGTGGTA 57.163 40.909 0.00 0.00 0.00 3.25
5400 8440 3.721087 ATTCGAAATGGAAGGAGTGGT 57.279 42.857 0.00 0.00 0.00 4.16
5401 8441 4.941263 TGTAATTCGAAATGGAAGGAGTGG 59.059 41.667 0.00 0.00 0.00 4.00
5402 8442 6.371548 TCTTGTAATTCGAAATGGAAGGAGTG 59.628 38.462 0.00 0.00 0.00 3.51
5403 8443 6.472887 TCTTGTAATTCGAAATGGAAGGAGT 58.527 36.000 0.00 0.00 0.00 3.85
5404 8444 6.985188 TCTTGTAATTCGAAATGGAAGGAG 57.015 37.500 0.00 0.00 0.00 3.69
5405 8445 6.884295 ACATCTTGTAATTCGAAATGGAAGGA 59.116 34.615 0.00 0.00 0.00 3.36
5406 8446 7.088589 ACATCTTGTAATTCGAAATGGAAGG 57.911 36.000 0.00 0.00 0.00 3.46
5407 8447 8.454106 AGAACATCTTGTAATTCGAAATGGAAG 58.546 33.333 0.00 3.11 0.00 3.46
5408 8448 8.335532 AGAACATCTTGTAATTCGAAATGGAA 57.664 30.769 0.00 0.00 0.00 3.53
5409 8449 7.921786 AGAACATCTTGTAATTCGAAATGGA 57.078 32.000 0.00 0.00 0.00 3.41
5410 8450 9.490663 GTTAGAACATCTTGTAATTCGAAATGG 57.509 33.333 0.00 0.00 0.00 3.16
5415 8455 9.706691 AGAAAGTTAGAACATCTTGTAATTCGA 57.293 29.630 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.