Multiple sequence alignment - TraesCS4D01G274300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G274300 chr4D 100.000 2443 0 0 1 2443 444520851 444518409 0.000000e+00 4512.0
1 TraesCS4D01G274300 chr4D 84.821 112 11 6 1982 2092 43361325 43361219 9.240000e-20 108.0
2 TraesCS4D01G274300 chr4D 89.552 67 6 1 754 819 71063927 71063861 1.560000e-12 84.2
3 TraesCS4D01G274300 chr4D 90.909 44 3 1 588 630 23901239 23901196 9.440000e-05 58.4
4 TraesCS4D01G274300 chr4B 95.310 1066 32 3 914 1979 555935113 555936160 0.000000e+00 1676.0
5 TraesCS4D01G274300 chr4B 90.909 66 5 1 755 819 105149394 105149459 1.200000e-13 87.9
6 TraesCS4D01G274300 chr4B 82.667 75 12 1 1830 1903 555935055 555935129 5.640000e-07 65.8
7 TraesCS4D01G274300 chr4A 90.538 1078 81 17 914 1982 21842242 21841177 0.000000e+00 1406.0
8 TraesCS4D01G274300 chr4A 89.610 77 7 1 544 619 548280360 548280284 2.000000e-16 97.1
9 TraesCS4D01G274300 chr4A 88.525 61 7 0 754 814 500110893 500110833 9.370000e-10 75.0
10 TraesCS4D01G274300 chr6B 93.269 312 20 1 2132 2443 290205788 290205478 2.210000e-125 459.0
11 TraesCS4D01G274300 chr6B 93.269 312 20 1 2132 2443 290269229 290269539 2.210000e-125 459.0
12 TraesCS4D01G274300 chr6B 82.143 140 16 5 1981 2118 255879049 255878917 7.140000e-21 111.0
13 TraesCS4D01G274300 chr7A 92.308 312 24 0 2132 2443 523630106 523629795 6.200000e-121 444.0
14 TraesCS4D01G274300 chr7A 88.152 211 23 2 3 212 265731892 265732101 1.450000e-62 250.0
15 TraesCS4D01G274300 chr7A 89.583 48 3 2 652 697 620399466 620399419 2.620000e-05 60.2
16 TraesCS4D01G274300 chr3B 94.718 284 13 2 2132 2415 677993452 677993171 8.020000e-120 440.0
17 TraesCS4D01G274300 chr3B 84.783 92 10 4 1956 2045 658057756 658057845 3.350000e-14 89.8
18 TraesCS4D01G274300 chr6A 91.667 312 26 0 2132 2443 483540002 483539691 1.340000e-117 433.0
19 TraesCS4D01G274300 chr6A 82.877 146 21 4 1970 2114 483540226 483540084 7.090000e-26 128.0
20 TraesCS4D01G274300 chr6A 98.276 58 1 0 1986 2043 614973868 614973811 4.300000e-18 102.0
21 TraesCS4D01G274300 chr7D 91.640 311 26 0 2133 2443 334112507 334112197 4.830000e-117 431.0
22 TraesCS4D01G274300 chr7D 90.385 312 30 0 2132 2443 145412002 145412313 6.290000e-111 411.0
23 TraesCS4D01G274300 chr7D 83.088 136 16 7 1986 2118 145411797 145411928 1.530000e-22 117.0
24 TraesCS4D01G274300 chr7D 90.476 63 6 0 757 819 580565506 580565444 1.560000e-12 84.2
25 TraesCS4D01G274300 chr1D 91.613 310 26 0 2132 2441 467040500 467040809 1.740000e-116 429.0
26 TraesCS4D01G274300 chr1D 99.526 211 1 0 1 211 157985534 157985744 3.810000e-103 385.0
27 TraesCS4D01G274300 chr1D 97.183 213 5 1 1 212 445930954 445931166 2.310000e-95 359.0
28 TraesCS4D01G274300 chr7B 91.026 312 28 0 2132 2443 208148641 208148952 2.900000e-114 422.0
29 TraesCS4D01G274300 chr7B 83.459 133 20 2 1986 2118 208148434 208148564 3.300000e-24 122.0
30 TraesCS4D01G274300 chr7B 93.846 65 4 0 1976 2040 313692227 313692291 5.560000e-17 99.0
31 TraesCS4D01G274300 chr3D 99.528 212 1 0 1 212 560256238 560256449 1.060000e-103 387.0
32 TraesCS4D01G274300 chr3D 87.879 66 8 0 754 819 64760309 64760374 7.240000e-11 78.7
33 TraesCS4D01G274300 chr3D 82.609 92 11 3 543 632 7750480 7750392 2.600000e-10 76.8
34 TraesCS4D01G274300 chr5D 98.598 214 3 0 1 214 275620178 275620391 1.770000e-101 379.0
35 TraesCS4D01G274300 chr5D 88.889 54 4 2 671 722 280715057 280715004 5.640000e-07 65.8
36 TraesCS4D01G274300 chr1A 95.775 213 7 2 1 211 453066918 453067130 2.330000e-90 342.0
37 TraesCS4D01G274300 chr1A 95.775 213 7 2 1 211 453070862 453071074 2.330000e-90 342.0
38 TraesCS4D01G274300 chr1A 80.645 93 12 5 544 634 41387250 41387162 1.570000e-07 67.6
39 TraesCS4D01G274300 chr2A 92.453 212 15 1 1 211 778721739 778721950 3.950000e-78 302.0
40 TraesCS4D01G274300 chr2A 85.246 61 9 0 755 815 622735946 622736006 2.030000e-06 63.9
41 TraesCS4D01G274300 chr3A 86.700 203 21 5 12 212 589544431 589544233 1.140000e-53 220.0
42 TraesCS4D01G274300 chr5A 96.774 62 1 1 1986 2046 477065413 477065352 4.300000e-18 102.0
43 TraesCS4D01G274300 chr5A 92.000 50 2 2 584 631 151732723 151732674 4.360000e-08 69.4
44 TraesCS4D01G274300 chr5A 85.075 67 8 2 754 819 11550454 11550389 1.570000e-07 67.6
45 TraesCS4D01G274300 chr5B 87.879 66 7 1 750 815 225691341 225691405 2.600000e-10 76.8
46 TraesCS4D01G274300 chrUn 90.698 43 4 0 755 797 103790860 103790818 9.440000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G274300 chr4D 444518409 444520851 2442 True 4512.0 4512 100.0000 1 2443 1 chr4D.!!$R4 2442
1 TraesCS4D01G274300 chr4B 555935055 555936160 1105 False 870.9 1676 88.9885 914 1979 2 chr4B.!!$F2 1065
2 TraesCS4D01G274300 chr4A 21841177 21842242 1065 True 1406.0 1406 90.5380 914 1982 1 chr4A.!!$R1 1068
3 TraesCS4D01G274300 chr6A 483539691 483540226 535 True 280.5 433 87.2720 1970 2443 2 chr6A.!!$R2 473
4 TraesCS4D01G274300 chr7D 145411797 145412313 516 False 264.0 411 86.7365 1986 2443 2 chr7D.!!$F1 457
5 TraesCS4D01G274300 chr7B 208148434 208148952 518 False 272.0 422 87.2425 1986 2443 2 chr7B.!!$F2 457
6 TraesCS4D01G274300 chr1A 453066918 453071074 4156 False 342.0 342 95.7750 1 211 2 chr1A.!!$F1 210

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
251 254 0.039035 AAACTAATGCCGGGGCTTGA 59.961 50.0 11.55 0.0 42.51 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2146 4168 0.179097 CAGCTACCTCCCTTCTTCGC 60.179 60.0 0.0 0.0 0.0 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 146 1.886861 CTTGTTCGCACCTCGTTCGG 61.887 60.000 0.00 0.00 39.67 4.30
232 235 8.682936 AAAAAGTCTTGCTTCTAATCTTCAGA 57.317 30.769 0.00 0.00 36.17 3.27
233 236 8.682936 AAAAGTCTTGCTTCTAATCTTCAGAA 57.317 30.769 0.00 0.00 36.17 3.02
234 237 8.682936 AAAGTCTTGCTTCTAATCTTCAGAAA 57.317 30.769 0.00 0.00 36.17 2.52
235 238 7.665561 AGTCTTGCTTCTAATCTTCAGAAAC 57.334 36.000 0.00 0.00 31.84 2.78
236 239 7.449247 AGTCTTGCTTCTAATCTTCAGAAACT 58.551 34.615 0.00 0.00 31.84 2.66
237 240 8.589338 AGTCTTGCTTCTAATCTTCAGAAACTA 58.411 33.333 0.00 0.00 31.84 2.24
238 241 9.209175 GTCTTGCTTCTAATCTTCAGAAACTAA 57.791 33.333 0.00 0.00 31.84 2.24
239 242 9.950496 TCTTGCTTCTAATCTTCAGAAACTAAT 57.050 29.630 0.00 0.00 31.84 1.73
240 243 9.985318 CTTGCTTCTAATCTTCAGAAACTAATG 57.015 33.333 0.00 0.00 31.84 1.90
241 244 7.978982 TGCTTCTAATCTTCAGAAACTAATGC 58.021 34.615 0.00 0.00 31.84 3.56
242 245 7.066284 TGCTTCTAATCTTCAGAAACTAATGCC 59.934 37.037 0.00 0.00 31.84 4.40
243 246 7.539712 TTCTAATCTTCAGAAACTAATGCCG 57.460 36.000 0.00 0.00 0.00 5.69
244 247 6.049149 TCTAATCTTCAGAAACTAATGCCGG 58.951 40.000 0.00 0.00 0.00 6.13
245 248 2.985896 TCTTCAGAAACTAATGCCGGG 58.014 47.619 2.18 0.00 0.00 5.73
246 249 2.017049 CTTCAGAAACTAATGCCGGGG 58.983 52.381 2.18 0.00 0.00 5.73
247 250 0.393808 TCAGAAACTAATGCCGGGGC 60.394 55.000 2.18 1.86 42.35 5.80
248 251 0.394352 CAGAAACTAATGCCGGGGCT 60.394 55.000 11.55 0.00 42.51 5.19
249 252 0.331616 AGAAACTAATGCCGGGGCTT 59.668 50.000 11.55 1.25 42.51 4.35
250 253 0.455815 GAAACTAATGCCGGGGCTTG 59.544 55.000 11.55 1.32 42.51 4.01
251 254 0.039035 AAACTAATGCCGGGGCTTGA 59.961 50.000 11.55 0.00 42.51 3.02
252 255 0.679960 AACTAATGCCGGGGCTTGAC 60.680 55.000 11.55 0.00 42.51 3.18
253 256 2.124901 TAATGCCGGGGCTTGACG 60.125 61.111 11.55 0.00 42.51 4.35
254 257 2.869503 CTAATGCCGGGGCTTGACGT 62.870 60.000 11.55 0.00 42.51 4.34
255 258 1.615165 TAATGCCGGGGCTTGACGTA 61.615 55.000 11.55 0.00 42.51 3.57
256 259 3.675619 ATGCCGGGGCTTGACGTAC 62.676 63.158 11.55 0.00 42.51 3.67
257 260 4.382320 GCCGGGGCTTGACGTACA 62.382 66.667 2.18 0.00 38.26 2.90
258 261 2.582436 CCGGGGCTTGACGTACAT 59.418 61.111 0.00 0.00 0.00 2.29
259 262 1.813753 CCGGGGCTTGACGTACATG 60.814 63.158 0.00 0.00 0.00 3.21
260 263 1.216977 CGGGGCTTGACGTACATGA 59.783 57.895 0.00 0.00 0.00 3.07
261 264 0.390603 CGGGGCTTGACGTACATGAA 60.391 55.000 0.00 0.00 0.00 2.57
262 265 1.084289 GGGGCTTGACGTACATGAAC 58.916 55.000 0.00 0.00 0.00 3.18
263 266 1.609580 GGGGCTTGACGTACATGAACA 60.610 52.381 0.00 0.00 0.00 3.18
264 267 2.356135 GGGCTTGACGTACATGAACAT 58.644 47.619 0.00 0.00 0.00 2.71
265 268 2.747446 GGGCTTGACGTACATGAACATT 59.253 45.455 0.00 0.00 0.00 2.71
266 269 3.936453 GGGCTTGACGTACATGAACATTA 59.064 43.478 0.00 0.00 0.00 1.90
267 270 4.574828 GGGCTTGACGTACATGAACATTAT 59.425 41.667 0.00 0.00 0.00 1.28
268 271 5.277345 GGGCTTGACGTACATGAACATTATC 60.277 44.000 0.00 0.00 0.00 1.75
269 272 5.293324 GGCTTGACGTACATGAACATTATCA 59.707 40.000 0.00 0.00 0.00 2.15
270 273 6.183360 GGCTTGACGTACATGAACATTATCAA 60.183 38.462 0.00 0.00 32.06 2.57
271 274 6.901887 GCTTGACGTACATGAACATTATCAAG 59.098 38.462 0.00 9.93 42.09 3.02
272 275 7.413000 GCTTGACGTACATGAACATTATCAAGT 60.413 37.037 0.00 0.00 41.53 3.16
273 276 7.899178 TGACGTACATGAACATTATCAAGTT 57.101 32.000 0.00 0.00 33.67 2.66
274 277 8.989653 TGACGTACATGAACATTATCAAGTTA 57.010 30.769 0.00 0.00 33.67 2.24
275 278 8.865978 TGACGTACATGAACATTATCAAGTTAC 58.134 33.333 0.00 0.00 33.67 2.50
276 279 7.891782 ACGTACATGAACATTATCAAGTTACG 58.108 34.615 0.00 0.28 36.00 3.18
277 280 7.009815 ACGTACATGAACATTATCAAGTTACGG 59.990 37.037 0.00 0.00 35.25 4.02
278 281 7.009815 CGTACATGAACATTATCAAGTTACGGT 59.990 37.037 0.00 0.00 33.67 4.83
279 282 7.681939 ACATGAACATTATCAAGTTACGGTT 57.318 32.000 0.00 0.00 27.43 4.44
280 283 7.748847 ACATGAACATTATCAAGTTACGGTTC 58.251 34.615 0.00 0.00 35.27 3.62
281 284 7.389330 ACATGAACATTATCAAGTTACGGTTCA 59.611 33.333 0.00 0.00 44.86 3.18
282 285 7.915293 TGAACATTATCAAGTTACGGTTCAT 57.085 32.000 0.00 0.00 38.61 2.57
283 286 7.970384 TGAACATTATCAAGTTACGGTTCATC 58.030 34.615 0.00 0.00 38.61 2.92
284 287 7.822334 TGAACATTATCAAGTTACGGTTCATCT 59.178 33.333 0.00 0.00 38.61 2.90
285 288 7.772332 ACATTATCAAGTTACGGTTCATCTC 57.228 36.000 0.00 0.00 0.00 2.75
286 289 6.475727 ACATTATCAAGTTACGGTTCATCTCG 59.524 38.462 0.00 0.00 0.00 4.04
287 290 4.713824 ATCAAGTTACGGTTCATCTCGA 57.286 40.909 0.00 0.00 0.00 4.04
288 291 4.713824 TCAAGTTACGGTTCATCTCGAT 57.286 40.909 0.00 0.00 0.00 3.59
289 292 5.068234 TCAAGTTACGGTTCATCTCGATT 57.932 39.130 0.00 0.00 0.00 3.34
290 293 6.198650 TCAAGTTACGGTTCATCTCGATTA 57.801 37.500 0.00 0.00 0.00 1.75
291 294 6.032094 TCAAGTTACGGTTCATCTCGATTAC 58.968 40.000 0.00 0.00 0.00 1.89
292 295 5.831702 AGTTACGGTTCATCTCGATTACT 57.168 39.130 0.00 0.00 0.00 2.24
293 296 6.932356 AGTTACGGTTCATCTCGATTACTA 57.068 37.500 0.00 0.00 0.00 1.82
294 297 6.723282 AGTTACGGTTCATCTCGATTACTAC 58.277 40.000 0.00 0.00 0.00 2.73
295 298 6.541641 AGTTACGGTTCATCTCGATTACTACT 59.458 38.462 0.00 0.00 0.00 2.57
296 299 5.831702 ACGGTTCATCTCGATTACTACTT 57.168 39.130 0.00 0.00 0.00 2.24
297 300 6.932356 ACGGTTCATCTCGATTACTACTTA 57.068 37.500 0.00 0.00 0.00 2.24
298 301 7.507733 ACGGTTCATCTCGATTACTACTTAT 57.492 36.000 0.00 0.00 0.00 1.73
299 302 8.613060 ACGGTTCATCTCGATTACTACTTATA 57.387 34.615 0.00 0.00 0.00 0.98
300 303 9.228949 ACGGTTCATCTCGATTACTACTTATAT 57.771 33.333 0.00 0.00 0.00 0.86
325 328 7.435068 AAATCATGTGTTTGTCCTAGTACAC 57.565 36.000 0.00 0.00 40.87 2.90
328 331 4.062677 TGTGTTTGTCCTAGTACACACC 57.937 45.455 2.70 0.00 44.10 4.16
329 332 3.451540 TGTGTTTGTCCTAGTACACACCA 59.548 43.478 2.70 0.00 44.10 4.17
330 333 4.101898 TGTGTTTGTCCTAGTACACACCAT 59.898 41.667 2.70 0.00 44.10 3.55
331 334 5.061179 GTGTTTGTCCTAGTACACACCATT 58.939 41.667 2.70 0.00 40.36 3.16
332 335 6.183360 TGTGTTTGTCCTAGTACACACCATTA 60.183 38.462 2.70 0.00 44.10 1.90
333 336 6.707161 GTGTTTGTCCTAGTACACACCATTAA 59.293 38.462 2.70 0.00 40.36 1.40
334 337 7.389607 GTGTTTGTCCTAGTACACACCATTAAT 59.610 37.037 2.70 0.00 40.36 1.40
335 338 7.389330 TGTTTGTCCTAGTACACACCATTAATG 59.611 37.037 8.58 8.58 30.63 1.90
336 339 6.614694 TGTCCTAGTACACACCATTAATGT 57.385 37.500 14.25 0.00 0.00 2.71
337 340 7.011499 TGTCCTAGTACACACCATTAATGTT 57.989 36.000 14.25 0.00 0.00 2.71
338 341 7.455058 TGTCCTAGTACACACCATTAATGTTT 58.545 34.615 14.25 0.00 0.00 2.83
339 342 7.940137 TGTCCTAGTACACACCATTAATGTTTT 59.060 33.333 14.25 0.00 0.00 2.43
340 343 8.448615 GTCCTAGTACACACCATTAATGTTTTC 58.551 37.037 14.25 0.00 0.00 2.29
341 344 8.158132 TCCTAGTACACACCATTAATGTTTTCA 58.842 33.333 14.25 0.00 0.00 2.69
342 345 8.788806 CCTAGTACACACCATTAATGTTTTCAA 58.211 33.333 14.25 0.00 0.00 2.69
345 348 9.077885 AGTACACACCATTAATGTTTTCAATCT 57.922 29.630 14.25 1.86 0.00 2.40
346 349 9.691362 GTACACACCATTAATGTTTTCAATCTT 57.309 29.630 14.25 0.00 0.00 2.40
347 350 8.816640 ACACACCATTAATGTTTTCAATCTTC 57.183 30.769 14.25 0.00 0.00 2.87
348 351 8.641541 ACACACCATTAATGTTTTCAATCTTCT 58.358 29.630 14.25 0.00 0.00 2.85
349 352 8.918658 CACACCATTAATGTTTTCAATCTTCTG 58.081 33.333 14.25 0.00 0.00 3.02
350 353 8.859090 ACACCATTAATGTTTTCAATCTTCTGA 58.141 29.630 14.25 0.00 0.00 3.27
351 354 9.695526 CACCATTAATGTTTTCAATCTTCTGAA 57.304 29.630 14.25 0.00 33.48 3.02
359 362 9.798994 ATGTTTTCAATCTTCTGAATCTAATGC 57.201 29.630 0.00 0.00 35.31 3.56
360 363 8.795513 TGTTTTCAATCTTCTGAATCTAATGCA 58.204 29.630 0.00 0.00 35.31 3.96
361 364 9.286946 GTTTTCAATCTTCTGAATCTAATGCAG 57.713 33.333 0.00 0.00 35.31 4.41
362 365 7.563888 TTCAATCTTCTGAATCTAATGCAGG 57.436 36.000 0.00 0.00 30.31 4.85
363 366 6.060136 TCAATCTTCTGAATCTAATGCAGGG 58.940 40.000 0.00 0.00 0.00 4.45
364 367 4.428294 TCTTCTGAATCTAATGCAGGGG 57.572 45.455 0.00 0.00 0.00 4.79
365 368 3.137176 TCTTCTGAATCTAATGCAGGGGG 59.863 47.826 0.00 0.00 0.00 5.40
366 369 2.492025 TCTGAATCTAATGCAGGGGGT 58.508 47.619 0.00 0.00 0.00 4.95
367 370 2.852449 TCTGAATCTAATGCAGGGGGTT 59.148 45.455 0.00 0.00 0.00 4.11
368 371 3.269381 TCTGAATCTAATGCAGGGGGTTT 59.731 43.478 0.00 0.00 0.00 3.27
369 372 3.364549 TGAATCTAATGCAGGGGGTTTG 58.635 45.455 0.00 0.00 0.00 2.93
370 373 2.459555 ATCTAATGCAGGGGGTTTGG 57.540 50.000 0.00 0.00 0.00 3.28
371 374 1.377690 TCTAATGCAGGGGGTTTGGA 58.622 50.000 0.00 0.00 0.00 3.53
372 375 1.929494 TCTAATGCAGGGGGTTTGGAT 59.071 47.619 0.00 0.00 0.00 3.41
373 376 3.127250 TCTAATGCAGGGGGTTTGGATA 58.873 45.455 0.00 0.00 0.00 2.59
374 377 2.938428 AATGCAGGGGGTTTGGATAA 57.062 45.000 0.00 0.00 0.00 1.75
375 378 2.159179 ATGCAGGGGGTTTGGATAAC 57.841 50.000 0.00 0.00 0.00 1.89
376 379 0.780637 TGCAGGGGGTTTGGATAACA 59.219 50.000 0.00 0.00 0.00 2.41
377 380 1.148027 TGCAGGGGGTTTGGATAACAA 59.852 47.619 0.00 0.00 37.28 2.83
378 381 2.252714 GCAGGGGGTTTGGATAACAAA 58.747 47.619 0.00 0.00 46.34 2.83
393 396 9.701098 TTGGATAACAAACTAGTAGTACAACAG 57.299 33.333 2.50 0.00 35.79 3.16
394 397 9.081204 TGGATAACAAACTAGTAGTACAACAGA 57.919 33.333 2.50 0.00 0.00 3.41
400 403 9.367444 ACAAACTAGTAGTACAACAGATATTGC 57.633 33.333 2.50 0.00 32.47 3.56
401 404 8.818057 CAAACTAGTAGTACAACAGATATTGCC 58.182 37.037 2.50 0.00 32.47 4.52
402 405 7.655521 ACTAGTAGTACAACAGATATTGCCA 57.344 36.000 0.00 0.00 32.47 4.92
403 406 7.717568 ACTAGTAGTACAACAGATATTGCCAG 58.282 38.462 0.00 0.00 32.47 4.85
404 407 6.791867 AGTAGTACAACAGATATTGCCAGA 57.208 37.500 2.52 0.00 32.47 3.86
405 408 6.810911 AGTAGTACAACAGATATTGCCAGAG 58.189 40.000 2.52 0.00 32.47 3.35
406 409 5.939764 AGTACAACAGATATTGCCAGAGA 57.060 39.130 0.00 0.00 32.47 3.10
407 410 6.491714 AGTACAACAGATATTGCCAGAGAT 57.508 37.500 0.00 0.00 32.47 2.75
408 411 7.603180 AGTACAACAGATATTGCCAGAGATA 57.397 36.000 0.00 0.00 32.47 1.98
409 412 7.437748 AGTACAACAGATATTGCCAGAGATAC 58.562 38.462 0.00 0.00 32.47 2.24
410 413 6.239217 ACAACAGATATTGCCAGAGATACA 57.761 37.500 0.00 0.00 32.47 2.29
411 414 6.653020 ACAACAGATATTGCCAGAGATACAA 58.347 36.000 0.00 0.00 32.47 2.41
412 415 7.112122 ACAACAGATATTGCCAGAGATACAAA 58.888 34.615 0.00 0.00 32.47 2.83
413 416 7.776969 ACAACAGATATTGCCAGAGATACAAAT 59.223 33.333 0.00 0.00 32.47 2.32
414 417 9.276590 CAACAGATATTGCCAGAGATACAAATA 57.723 33.333 0.00 0.00 0.00 1.40
415 418 9.499479 AACAGATATTGCCAGAGATACAAATAG 57.501 33.333 0.00 0.00 0.00 1.73
416 419 8.874156 ACAGATATTGCCAGAGATACAAATAGA 58.126 33.333 0.00 0.00 0.00 1.98
417 420 9.716531 CAGATATTGCCAGAGATACAAATAGAA 57.283 33.333 0.00 0.00 0.00 2.10
477 480 7.549147 GGTATGATACCTCTGGTACCATTAA 57.451 40.000 16.75 3.25 39.21 1.40
478 481 7.970102 GGTATGATACCTCTGGTACCATTAAA 58.030 38.462 16.75 0.60 39.21 1.52
479 482 8.434392 GGTATGATACCTCTGGTACCATTAAAA 58.566 37.037 16.75 1.77 39.21 1.52
481 484 8.924511 ATGATACCTCTGGTACCATTAAAATG 57.075 34.615 16.75 1.40 39.21 2.32
482 485 6.770785 TGATACCTCTGGTACCATTAAAATGC 59.229 38.462 16.75 2.88 41.31 3.56
483 486 5.193099 ACCTCTGGTACCATTAAAATGCT 57.807 39.130 16.75 0.00 32.11 3.79
484 487 6.321821 ACCTCTGGTACCATTAAAATGCTA 57.678 37.500 16.75 0.00 32.11 3.49
485 488 6.120220 ACCTCTGGTACCATTAAAATGCTAC 58.880 40.000 16.75 0.00 32.11 3.58
486 489 6.069615 ACCTCTGGTACCATTAAAATGCTACT 60.070 38.462 16.75 0.00 32.11 2.57
487 490 6.483640 CCTCTGGTACCATTAAAATGCTACTC 59.516 42.308 16.75 1.51 35.08 2.59
488 491 6.953101 TCTGGTACCATTAAAATGCTACTCA 58.047 36.000 16.75 4.73 35.08 3.41
489 492 7.573710 TCTGGTACCATTAAAATGCTACTCAT 58.426 34.615 16.75 0.00 36.87 2.90
490 493 8.052748 TCTGGTACCATTAAAATGCTACTCATT 58.947 33.333 16.75 0.00 46.82 2.57
491 494 8.220755 TGGTACCATTAAAATGCTACTCATTC 57.779 34.615 11.60 0.00 44.23 2.67
492 495 8.052748 TGGTACCATTAAAATGCTACTCATTCT 58.947 33.333 11.60 0.00 44.23 2.40
493 496 8.560374 GGTACCATTAAAATGCTACTCATTCTC 58.440 37.037 7.15 0.00 44.23 2.87
494 497 7.573968 ACCATTAAAATGCTACTCATTCTCC 57.426 36.000 0.00 0.00 44.23 3.71
495 498 7.118723 ACCATTAAAATGCTACTCATTCTCCA 58.881 34.615 0.00 0.00 44.23 3.86
496 499 7.781693 ACCATTAAAATGCTACTCATTCTCCAT 59.218 33.333 0.00 0.00 44.23 3.41
497 500 9.288576 CCATTAAAATGCTACTCATTCTCCATA 57.711 33.333 0.00 0.00 44.23 2.74
499 502 9.851686 ATTAAAATGCTACTCATTCTCCATACA 57.148 29.630 0.00 0.00 44.23 2.29
500 503 9.851686 TTAAAATGCTACTCATTCTCCATACAT 57.148 29.630 0.00 0.00 44.23 2.29
503 506 9.664332 AAATGCTACTCATTCTCCATACATATC 57.336 33.333 0.00 0.00 44.23 1.63
504 507 8.606754 ATGCTACTCATTCTCCATACATATCT 57.393 34.615 0.00 0.00 29.16 1.98
505 508 8.060931 TGCTACTCATTCTCCATACATATCTC 57.939 38.462 0.00 0.00 0.00 2.75
506 509 7.892771 TGCTACTCATTCTCCATACATATCTCT 59.107 37.037 0.00 0.00 0.00 3.10
507 510 8.748412 GCTACTCATTCTCCATACATATCTCTT 58.252 37.037 0.00 0.00 0.00 2.85
509 512 8.718158 ACTCATTCTCCATACATATCTCTTCA 57.282 34.615 0.00 0.00 0.00 3.02
510 513 8.584157 ACTCATTCTCCATACATATCTCTTCAC 58.416 37.037 0.00 0.00 0.00 3.18
511 514 7.901029 TCATTCTCCATACATATCTCTTCACC 58.099 38.462 0.00 0.00 0.00 4.02
512 515 5.966742 TCTCCATACATATCTCTTCACCG 57.033 43.478 0.00 0.00 0.00 4.94
513 516 4.218635 TCTCCATACATATCTCTTCACCGC 59.781 45.833 0.00 0.00 0.00 5.68
514 517 3.057526 TCCATACATATCTCTTCACCGCG 60.058 47.826 0.00 0.00 0.00 6.46
515 518 2.417339 TACATATCTCTTCACCGCGC 57.583 50.000 0.00 0.00 0.00 6.86
516 519 0.459899 ACATATCTCTTCACCGCGCA 59.540 50.000 8.75 0.00 0.00 6.09
517 520 1.134818 ACATATCTCTTCACCGCGCAA 60.135 47.619 8.75 0.00 0.00 4.85
518 521 1.258982 CATATCTCTTCACCGCGCAAC 59.741 52.381 8.75 0.00 0.00 4.17
519 522 0.459585 TATCTCTTCACCGCGCAACC 60.460 55.000 8.75 0.00 0.00 3.77
520 523 2.172483 ATCTCTTCACCGCGCAACCT 62.172 55.000 8.75 0.00 0.00 3.50
521 524 1.961277 CTCTTCACCGCGCAACCTT 60.961 57.895 8.75 0.00 0.00 3.50
522 525 1.507141 CTCTTCACCGCGCAACCTTT 61.507 55.000 8.75 0.00 0.00 3.11
523 526 1.098712 TCTTCACCGCGCAACCTTTT 61.099 50.000 8.75 0.00 0.00 2.27
524 527 0.660300 CTTCACCGCGCAACCTTTTC 60.660 55.000 8.75 0.00 0.00 2.29
525 528 1.377366 TTCACCGCGCAACCTTTTCA 61.377 50.000 8.75 0.00 0.00 2.69
526 529 1.370414 CACCGCGCAACCTTTTCAG 60.370 57.895 8.75 0.00 0.00 3.02
528 531 2.429069 CGCGCAACCTTTTCAGGC 60.429 61.111 8.75 0.00 45.56 4.85
529 532 2.049156 GCGCAACCTTTTCAGGCC 60.049 61.111 0.30 0.00 45.56 5.19
530 533 2.564721 GCGCAACCTTTTCAGGCCT 61.565 57.895 0.00 0.00 45.56 5.19
531 534 1.241315 GCGCAACCTTTTCAGGCCTA 61.241 55.000 3.98 0.00 45.56 3.93
532 535 1.463674 CGCAACCTTTTCAGGCCTAT 58.536 50.000 3.98 0.00 45.56 2.57
533 536 2.639065 CGCAACCTTTTCAGGCCTATA 58.361 47.619 3.98 0.00 45.56 1.31
534 537 3.013921 CGCAACCTTTTCAGGCCTATAA 58.986 45.455 3.98 0.00 45.56 0.98
535 538 3.442273 CGCAACCTTTTCAGGCCTATAAA 59.558 43.478 3.98 6.65 45.56 1.40
536 539 4.097892 CGCAACCTTTTCAGGCCTATAAAT 59.902 41.667 3.98 0.00 45.56 1.40
537 540 5.298276 CGCAACCTTTTCAGGCCTATAAATA 59.702 40.000 3.98 0.39 45.56 1.40
538 541 6.504398 GCAACCTTTTCAGGCCTATAAATAC 58.496 40.000 3.98 0.00 45.56 1.89
539 542 6.725246 CAACCTTTTCAGGCCTATAAATACG 58.275 40.000 3.98 2.76 45.56 3.06
540 543 6.243216 ACCTTTTCAGGCCTATAAATACGA 57.757 37.500 3.98 0.00 45.56 3.43
541 544 6.655930 ACCTTTTCAGGCCTATAAATACGAA 58.344 36.000 3.98 0.00 45.56 3.85
542 545 7.114095 ACCTTTTCAGGCCTATAAATACGAAA 58.886 34.615 3.98 5.67 45.56 3.46
543 546 7.778382 ACCTTTTCAGGCCTATAAATACGAAAT 59.222 33.333 3.98 0.00 45.56 2.17
544 547 9.280174 CCTTTTCAGGCCTATAAATACGAAATA 57.720 33.333 3.98 0.00 31.53 1.40
546 549 9.841295 TTTTCAGGCCTATAAATACGAAATACT 57.159 29.630 3.98 0.00 0.00 2.12
547 550 9.485206 TTTCAGGCCTATAAATACGAAATACTC 57.515 33.333 3.98 0.00 0.00 2.59
548 551 8.418597 TCAGGCCTATAAATACGAAATACTCT 57.581 34.615 3.98 0.00 0.00 3.24
549 552 8.521176 TCAGGCCTATAAATACGAAATACTCTC 58.479 37.037 3.98 0.00 0.00 3.20
550 553 8.524487 CAGGCCTATAAATACGAAATACTCTCT 58.476 37.037 3.98 0.00 0.00 3.10
551 554 9.750783 AGGCCTATAAATACGAAATACTCTCTA 57.249 33.333 1.29 0.00 0.00 2.43
635 638 8.515695 TTTCTTTACGGAGAGAGTATATGTCA 57.484 34.615 0.00 0.00 0.00 3.58
636 639 8.515695 TTCTTTACGGAGAGAGTATATGTCAA 57.484 34.615 0.00 0.00 0.00 3.18
637 640 8.155821 TCTTTACGGAGAGAGTATATGTCAAG 57.844 38.462 0.00 0.00 0.00 3.02
638 641 7.991460 TCTTTACGGAGAGAGTATATGTCAAGA 59.009 37.037 0.00 0.00 0.00 3.02
639 642 8.693120 TTTACGGAGAGAGTATATGTCAAGAT 57.307 34.615 0.00 0.00 0.00 2.40
640 643 8.693120 TTACGGAGAGAGTATATGTCAAGATT 57.307 34.615 0.00 0.00 0.00 2.40
641 644 6.976088 ACGGAGAGAGTATATGTCAAGATTG 58.024 40.000 0.00 0.00 0.00 2.67
642 645 6.773200 ACGGAGAGAGTATATGTCAAGATTGA 59.227 38.462 0.00 0.00 34.20 2.57
643 646 7.450014 ACGGAGAGAGTATATGTCAAGATTGAT 59.550 37.037 0.00 0.00 39.73 2.57
644 647 8.303156 CGGAGAGAGTATATGTCAAGATTGATT 58.697 37.037 0.00 0.00 39.73 2.57
645 648 9.995003 GGAGAGAGTATATGTCAAGATTGATTT 57.005 33.333 0.00 0.00 39.73 2.17
654 657 6.518208 TGTCAAGATTGATTTCATGATGCA 57.482 33.333 0.00 0.00 39.73 3.96
655 658 6.926313 TGTCAAGATTGATTTCATGATGCAA 58.074 32.000 0.00 2.01 39.73 4.08
656 659 7.379750 TGTCAAGATTGATTTCATGATGCAAA 58.620 30.769 0.00 0.00 39.73 3.68
657 660 8.038351 TGTCAAGATTGATTTCATGATGCAAAT 58.962 29.630 0.00 0.00 39.73 2.32
658 661 8.879759 GTCAAGATTGATTTCATGATGCAAATT 58.120 29.630 0.00 0.00 39.73 1.82
659 662 8.878769 TCAAGATTGATTTCATGATGCAAATTG 58.121 29.630 17.02 17.02 31.01 2.32
660 663 8.878769 CAAGATTGATTTCATGATGCAAATTGA 58.121 29.630 17.59 0.00 0.00 2.57
661 664 8.648557 AGATTGATTTCATGATGCAAATTGAG 57.351 30.769 0.00 0.00 0.00 3.02
662 665 6.656314 TTGATTTCATGATGCAAATTGAGC 57.344 33.333 0.00 0.00 0.00 4.26
663 666 4.801516 TGATTTCATGATGCAAATTGAGCG 59.198 37.500 0.00 0.00 33.85 5.03
664 667 3.853831 TTCATGATGCAAATTGAGCGT 57.146 38.095 0.00 0.00 33.85 5.07
665 668 4.961435 TTCATGATGCAAATTGAGCGTA 57.039 36.364 0.00 0.00 33.85 4.42
666 669 4.541085 TCATGATGCAAATTGAGCGTAG 57.459 40.909 0.00 0.00 33.85 3.51
684 687 5.968387 CGTAGCTTAGATGGTTAGGTTTG 57.032 43.478 0.00 0.00 0.00 2.93
685 688 5.416947 CGTAGCTTAGATGGTTAGGTTTGT 58.583 41.667 0.00 0.00 0.00 2.83
686 689 5.873164 CGTAGCTTAGATGGTTAGGTTTGTT 59.127 40.000 0.00 0.00 0.00 2.83
687 690 6.183360 CGTAGCTTAGATGGTTAGGTTTGTTG 60.183 42.308 0.00 0.00 0.00 3.33
688 691 5.010282 AGCTTAGATGGTTAGGTTTGTTGG 58.990 41.667 0.00 0.00 0.00 3.77
689 692 4.765339 GCTTAGATGGTTAGGTTTGTTGGT 59.235 41.667 0.00 0.00 0.00 3.67
690 693 5.335661 GCTTAGATGGTTAGGTTTGTTGGTG 60.336 44.000 0.00 0.00 0.00 4.17
691 694 3.496331 AGATGGTTAGGTTTGTTGGTGG 58.504 45.455 0.00 0.00 0.00 4.61
692 695 3.139397 AGATGGTTAGGTTTGTTGGTGGA 59.861 43.478 0.00 0.00 0.00 4.02
693 696 3.383698 TGGTTAGGTTTGTTGGTGGAA 57.616 42.857 0.00 0.00 0.00 3.53
694 697 3.917300 TGGTTAGGTTTGTTGGTGGAAT 58.083 40.909 0.00 0.00 0.00 3.01
695 698 3.892588 TGGTTAGGTTTGTTGGTGGAATC 59.107 43.478 0.00 0.00 0.00 2.52
696 699 3.892588 GGTTAGGTTTGTTGGTGGAATCA 59.107 43.478 0.00 0.00 0.00 2.57
697 700 4.022329 GGTTAGGTTTGTTGGTGGAATCAG 60.022 45.833 0.00 0.00 0.00 2.90
698 701 1.963515 AGGTTTGTTGGTGGAATCAGC 59.036 47.619 0.00 0.00 41.42 4.26
699 702 1.000843 GGTTTGTTGGTGGAATCAGCC 59.999 52.381 0.00 0.00 40.42 4.85
700 703 1.000843 GTTTGTTGGTGGAATCAGCCC 59.999 52.381 0.00 0.00 40.42 5.19
701 704 0.187117 TTGTTGGTGGAATCAGCCCA 59.813 50.000 0.00 0.00 40.42 5.36
705 708 4.326255 GTGGAATCAGCCCACCAG 57.674 61.111 0.00 0.00 46.30 4.00
706 709 1.379044 GTGGAATCAGCCCACCAGG 60.379 63.158 0.00 0.00 46.30 4.45
719 722 3.059352 CCACCAGGGTTCAAGTCTTAG 57.941 52.381 0.00 0.00 0.00 2.18
720 723 2.637872 CCACCAGGGTTCAAGTCTTAGA 59.362 50.000 0.00 0.00 0.00 2.10
721 724 3.557264 CCACCAGGGTTCAAGTCTTAGAC 60.557 52.174 3.85 3.85 0.00 2.59
722 725 3.071023 CACCAGGGTTCAAGTCTTAGACA 59.929 47.826 15.23 0.00 34.60 3.41
723 726 3.714798 ACCAGGGTTCAAGTCTTAGACAA 59.285 43.478 15.23 0.00 34.60 3.18
724 727 4.065789 CCAGGGTTCAAGTCTTAGACAAC 58.934 47.826 15.23 9.89 34.60 3.32
725 728 4.202367 CCAGGGTTCAAGTCTTAGACAACT 60.202 45.833 15.23 0.00 34.60 3.16
726 729 5.011738 CCAGGGTTCAAGTCTTAGACAACTA 59.988 44.000 15.23 0.00 34.60 2.24
727 730 6.463897 CCAGGGTTCAAGTCTTAGACAACTAA 60.464 42.308 15.23 0.76 37.13 2.24
728 731 7.162082 CAGGGTTCAAGTCTTAGACAACTAAT 58.838 38.462 15.23 0.00 37.85 1.73
729 732 7.118390 CAGGGTTCAAGTCTTAGACAACTAATG 59.882 40.741 15.23 7.07 37.85 1.90
730 733 6.128254 GGGTTCAAGTCTTAGACAACTAATGC 60.128 42.308 15.23 0.00 37.85 3.56
731 734 6.128254 GGTTCAAGTCTTAGACAACTAATGCC 60.128 42.308 15.23 2.91 37.85 4.40
732 735 6.109156 TCAAGTCTTAGACAACTAATGCCA 57.891 37.500 15.23 0.00 37.85 4.92
733 736 6.166279 TCAAGTCTTAGACAACTAATGCCAG 58.834 40.000 15.23 0.00 37.85 4.85
734 737 5.746990 AGTCTTAGACAACTAATGCCAGT 57.253 39.130 15.23 0.00 37.85 4.00
735 738 5.725362 AGTCTTAGACAACTAATGCCAGTC 58.275 41.667 15.23 0.00 37.85 3.51
736 739 5.482175 AGTCTTAGACAACTAATGCCAGTCT 59.518 40.000 15.23 0.00 41.88 3.24
737 740 6.014156 AGTCTTAGACAACTAATGCCAGTCTT 60.014 38.462 15.23 0.00 39.92 3.01
738 741 7.178628 AGTCTTAGACAACTAATGCCAGTCTTA 59.821 37.037 15.23 0.00 39.92 2.10
739 742 7.489757 GTCTTAGACAACTAATGCCAGTCTTAG 59.510 40.741 7.59 0.00 39.92 2.18
740 743 7.396339 TCTTAGACAACTAATGCCAGTCTTAGA 59.604 37.037 0.00 0.00 40.52 2.10
741 744 5.725362 AGACAACTAATGCCAGTCTTAGAC 58.275 41.667 3.85 3.85 36.21 2.59
742 745 5.246203 AGACAACTAATGCCAGTCTTAGACA 59.754 40.000 15.23 0.00 36.21 3.41
743 746 5.865085 ACAACTAATGCCAGTCTTAGACAA 58.135 37.500 15.23 0.00 34.60 3.18
744 747 5.701290 ACAACTAATGCCAGTCTTAGACAAC 59.299 40.000 15.23 3.94 34.60 3.32
745 748 4.833390 ACTAATGCCAGTCTTAGACAACC 58.167 43.478 15.23 2.55 34.60 3.77
746 749 3.788227 AATGCCAGTCTTAGACAACCA 57.212 42.857 15.23 8.04 34.60 3.67
747 750 3.788227 ATGCCAGTCTTAGACAACCAA 57.212 42.857 15.23 0.00 34.60 3.67
748 751 3.788227 TGCCAGTCTTAGACAACCAAT 57.212 42.857 15.23 0.00 34.60 3.16
749 752 4.901197 TGCCAGTCTTAGACAACCAATA 57.099 40.909 15.23 0.00 34.60 1.90
750 753 4.575885 TGCCAGTCTTAGACAACCAATAC 58.424 43.478 15.23 0.00 34.60 1.89
751 754 4.041075 TGCCAGTCTTAGACAACCAATACA 59.959 41.667 15.23 0.00 34.60 2.29
752 755 5.001232 GCCAGTCTTAGACAACCAATACAA 58.999 41.667 15.23 0.00 34.60 2.41
753 756 5.122396 GCCAGTCTTAGACAACCAATACAAG 59.878 44.000 15.23 0.00 34.60 3.16
754 757 6.231211 CCAGTCTTAGACAACCAATACAAGT 58.769 40.000 15.23 0.00 34.60 3.16
755 758 6.147821 CCAGTCTTAGACAACCAATACAAGTG 59.852 42.308 15.23 0.00 34.60 3.16
756 759 5.701290 AGTCTTAGACAACCAATACAAGTGC 59.299 40.000 15.23 0.00 34.60 4.40
757 760 5.701290 GTCTTAGACAACCAATACAAGTGCT 59.299 40.000 7.59 0.00 32.09 4.40
758 761 5.932303 TCTTAGACAACCAATACAAGTGCTC 59.068 40.000 0.00 0.00 0.00 4.26
759 762 4.085357 AGACAACCAATACAAGTGCTCA 57.915 40.909 0.00 0.00 0.00 4.26
760 763 3.815401 AGACAACCAATACAAGTGCTCAC 59.185 43.478 0.00 0.00 0.00 3.51
761 764 3.550820 ACAACCAATACAAGTGCTCACA 58.449 40.909 2.63 0.00 0.00 3.58
762 765 4.144297 ACAACCAATACAAGTGCTCACAT 58.856 39.130 2.63 0.00 0.00 3.21
763 766 4.584325 ACAACCAATACAAGTGCTCACATT 59.416 37.500 2.63 0.00 0.00 2.71
764 767 5.068987 ACAACCAATACAAGTGCTCACATTT 59.931 36.000 2.63 0.00 0.00 2.32
765 768 5.789643 ACCAATACAAGTGCTCACATTTT 57.210 34.783 2.63 0.00 0.00 1.82
766 769 6.160576 ACCAATACAAGTGCTCACATTTTT 57.839 33.333 2.63 0.00 0.00 1.94
767 770 6.215845 ACCAATACAAGTGCTCACATTTTTC 58.784 36.000 2.63 0.00 0.00 2.29
768 771 6.040842 ACCAATACAAGTGCTCACATTTTTCT 59.959 34.615 2.63 0.00 0.00 2.52
769 772 6.364165 CCAATACAAGTGCTCACATTTTTCTG 59.636 38.462 2.63 0.00 0.00 3.02
770 773 6.882610 ATACAAGTGCTCACATTTTTCTGA 57.117 33.333 2.63 0.00 0.00 3.27
771 774 5.581126 ACAAGTGCTCACATTTTTCTGAA 57.419 34.783 2.63 0.00 0.00 3.02
772 775 6.152932 ACAAGTGCTCACATTTTTCTGAAT 57.847 33.333 2.63 0.00 0.00 2.57
773 776 6.576185 ACAAGTGCTCACATTTTTCTGAATT 58.424 32.000 2.63 0.00 0.00 2.17
774 777 7.043565 ACAAGTGCTCACATTTTTCTGAATTT 58.956 30.769 2.63 0.00 0.00 1.82
775 778 8.196771 ACAAGTGCTCACATTTTTCTGAATTTA 58.803 29.630 2.63 0.00 0.00 1.40
776 779 9.199982 CAAGTGCTCACATTTTTCTGAATTTAT 57.800 29.630 2.63 0.00 0.00 1.40
777 780 9.768662 AAGTGCTCACATTTTTCTGAATTTATT 57.231 25.926 2.63 0.00 0.00 1.40
778 781 9.768662 AGTGCTCACATTTTTCTGAATTTATTT 57.231 25.926 2.63 0.00 0.00 1.40
780 783 9.761504 TGCTCACATTTTTCTGAATTTATTTCA 57.238 25.926 0.00 0.00 42.09 2.69
791 794 5.949735 TGAATTTATTTCAGGCTTTCCGAC 58.050 37.500 0.00 0.00 39.44 4.79
792 795 4.616181 ATTTATTTCAGGCTTTCCGACG 57.384 40.909 0.00 0.00 37.47 5.12
793 796 3.322211 TTATTTCAGGCTTTCCGACGA 57.678 42.857 0.00 0.00 37.47 4.20
794 797 2.403252 ATTTCAGGCTTTCCGACGAT 57.597 45.000 0.00 0.00 37.47 3.73
795 798 1.438651 TTTCAGGCTTTCCGACGATG 58.561 50.000 0.00 0.00 37.47 3.84
796 799 0.320374 TTCAGGCTTTCCGACGATGT 59.680 50.000 0.00 0.00 37.47 3.06
797 800 0.108804 TCAGGCTTTCCGACGATGTC 60.109 55.000 0.00 0.00 37.47 3.06
798 801 0.108615 CAGGCTTTCCGACGATGTCT 60.109 55.000 0.00 0.00 37.47 3.41
799 802 0.108615 AGGCTTTCCGACGATGTCTG 60.109 55.000 0.00 0.00 37.47 3.51
800 803 0.389948 GGCTTTCCGACGATGTCTGT 60.390 55.000 0.00 0.00 0.00 3.41
801 804 1.429463 GCTTTCCGACGATGTCTGTT 58.571 50.000 0.00 0.00 0.00 3.16
802 805 1.390463 GCTTTCCGACGATGTCTGTTC 59.610 52.381 0.00 0.00 0.00 3.18
803 806 2.672714 CTTTCCGACGATGTCTGTTCA 58.327 47.619 0.00 0.00 0.00 3.18
804 807 2.347697 TTCCGACGATGTCTGTTCAG 57.652 50.000 0.00 0.00 0.00 3.02
805 808 1.244816 TCCGACGATGTCTGTTCAGT 58.755 50.000 0.00 0.00 0.00 3.41
806 809 1.068541 TCCGACGATGTCTGTTCAGTG 60.069 52.381 0.00 0.00 0.00 3.66
807 810 0.710567 CGACGATGTCTGTTCAGTGC 59.289 55.000 0.00 0.00 0.00 4.40
808 811 0.710567 GACGATGTCTGTTCAGTGCG 59.289 55.000 0.00 0.00 0.00 5.34
809 812 0.313987 ACGATGTCTGTTCAGTGCGA 59.686 50.000 0.00 0.00 0.00 5.10
810 813 0.987715 CGATGTCTGTTCAGTGCGAG 59.012 55.000 0.00 0.00 0.00 5.03
811 814 1.354040 GATGTCTGTTCAGTGCGAGG 58.646 55.000 0.00 0.00 0.00 4.63
812 815 0.969149 ATGTCTGTTCAGTGCGAGGA 59.031 50.000 0.00 0.00 0.00 3.71
813 816 0.315251 TGTCTGTTCAGTGCGAGGAG 59.685 55.000 0.00 0.00 0.00 3.69
814 817 0.598562 GTCTGTTCAGTGCGAGGAGA 59.401 55.000 0.00 0.00 0.00 3.71
815 818 1.203523 GTCTGTTCAGTGCGAGGAGAT 59.796 52.381 0.00 0.00 0.00 2.75
816 819 1.203287 TCTGTTCAGTGCGAGGAGATG 59.797 52.381 0.00 0.00 0.00 2.90
817 820 0.969149 TGTTCAGTGCGAGGAGATGT 59.031 50.000 0.00 0.00 0.00 3.06
818 821 1.344438 TGTTCAGTGCGAGGAGATGTT 59.656 47.619 0.00 0.00 0.00 2.71
819 822 2.560981 TGTTCAGTGCGAGGAGATGTTA 59.439 45.455 0.00 0.00 0.00 2.41
820 823 3.006430 TGTTCAGTGCGAGGAGATGTTAA 59.994 43.478 0.00 0.00 0.00 2.01
821 824 4.184629 GTTCAGTGCGAGGAGATGTTAAT 58.815 43.478 0.00 0.00 0.00 1.40
822 825 4.471904 TCAGTGCGAGGAGATGTTAATT 57.528 40.909 0.00 0.00 0.00 1.40
823 826 5.592104 TCAGTGCGAGGAGATGTTAATTA 57.408 39.130 0.00 0.00 0.00 1.40
824 827 5.592054 TCAGTGCGAGGAGATGTTAATTAG 58.408 41.667 0.00 0.00 0.00 1.73
825 828 5.127194 TCAGTGCGAGGAGATGTTAATTAGT 59.873 40.000 0.00 0.00 0.00 2.24
826 829 5.812642 CAGTGCGAGGAGATGTTAATTAGTT 59.187 40.000 0.00 0.00 0.00 2.24
827 830 6.313905 CAGTGCGAGGAGATGTTAATTAGTTT 59.686 38.462 0.00 0.00 0.00 2.66
828 831 6.535508 AGTGCGAGGAGATGTTAATTAGTTTC 59.464 38.462 0.00 0.00 0.00 2.78
829 832 5.815740 TGCGAGGAGATGTTAATTAGTTTCC 59.184 40.000 0.00 0.00 0.00 3.13
830 833 6.049790 GCGAGGAGATGTTAATTAGTTTCCT 58.950 40.000 6.46 6.46 36.56 3.36
831 834 7.147794 TGCGAGGAGATGTTAATTAGTTTCCTA 60.148 37.037 6.64 0.00 34.14 2.94
832 835 7.169476 GCGAGGAGATGTTAATTAGTTTCCTAC 59.831 40.741 6.64 0.00 34.14 3.18
833 836 8.414778 CGAGGAGATGTTAATTAGTTTCCTACT 58.585 37.037 6.64 0.00 41.04 2.57
862 865 8.446489 TGTGTATTAGAAATGTGCAATTTTCG 57.554 30.769 13.85 0.00 37.03 3.46
863 866 8.293157 TGTGTATTAGAAATGTGCAATTTTCGA 58.707 29.630 13.85 8.46 37.03 3.71
864 867 8.575454 GTGTATTAGAAATGTGCAATTTTCGAC 58.425 33.333 13.85 11.68 37.03 4.20
865 868 8.293157 TGTATTAGAAATGTGCAATTTTCGACA 58.707 29.630 13.85 13.31 37.03 4.35
866 869 9.123709 GTATTAGAAATGTGCAATTTTCGACAA 57.876 29.630 13.85 10.86 37.03 3.18
867 870 5.888412 AGAAATGTGCAATTTTCGACAAC 57.112 34.783 13.85 0.64 37.03 3.32
868 871 5.591099 AGAAATGTGCAATTTTCGACAACT 58.409 33.333 13.85 2.35 37.03 3.16
869 872 6.734137 AGAAATGTGCAATTTTCGACAACTA 58.266 32.000 13.85 0.00 37.03 2.24
870 873 7.199766 AGAAATGTGCAATTTTCGACAACTAA 58.800 30.769 13.85 0.00 37.03 2.24
871 874 7.867403 AGAAATGTGCAATTTTCGACAACTAAT 59.133 29.630 13.85 0.00 37.03 1.73
872 875 6.932901 ATGTGCAATTTTCGACAACTAATG 57.067 33.333 0.00 0.00 0.00 1.90
873 876 4.679197 TGTGCAATTTTCGACAACTAATGC 59.321 37.500 0.00 0.00 0.00 3.56
874 877 4.089923 GTGCAATTTTCGACAACTAATGCC 59.910 41.667 0.00 1.31 0.00 4.40
875 878 4.233789 GCAATTTTCGACAACTAATGCCA 58.766 39.130 0.00 0.00 0.00 4.92
876 879 4.324402 GCAATTTTCGACAACTAATGCCAG 59.676 41.667 0.00 0.00 0.00 4.85
877 880 5.460646 CAATTTTCGACAACTAATGCCAGT 58.539 37.500 0.00 0.00 0.00 4.00
878 881 6.607689 CAATTTTCGACAACTAATGCCAGTA 58.392 36.000 0.00 0.00 0.00 2.74
879 882 7.250569 CAATTTTCGACAACTAATGCCAGTAT 58.749 34.615 0.00 0.00 0.00 2.12
880 883 6.811253 TTTTCGACAACTAATGCCAGTATT 57.189 33.333 0.00 0.00 0.00 1.89
881 884 5.794687 TTCGACAACTAATGCCAGTATTG 57.205 39.130 0.00 0.00 0.00 1.90
900 903 9.862371 CAGTATTGGATATAGGATGAACACTAC 57.138 37.037 0.00 0.00 0.00 2.73
901 904 9.830186 AGTATTGGATATAGGATGAACACTACT 57.170 33.333 0.00 0.00 0.00 2.57
904 907 9.601810 ATTGGATATAGGATGAACACTACTACA 57.398 33.333 0.00 0.00 0.00 2.74
905 908 9.601810 TTGGATATAGGATGAACACTACTACAT 57.398 33.333 0.00 0.00 0.00 2.29
906 909 9.601810 TGGATATAGGATGAACACTACTACATT 57.398 33.333 0.00 0.00 0.00 2.71
911 914 9.765795 ATAGGATGAACACTACTACATTAAAGC 57.234 33.333 0.00 0.00 0.00 3.51
912 915 7.852263 AGGATGAACACTACTACATTAAAGCT 58.148 34.615 0.00 0.00 0.00 3.74
975 978 2.099263 ACACCCGAGATCTTCACATACG 59.901 50.000 0.00 0.00 0.00 3.06
995 998 5.728637 ACGTGCATATCTAATCTCCATCA 57.271 39.130 0.00 0.00 0.00 3.07
1045 1049 6.758886 CCATCACACAATCTTTCTAGTCCTAC 59.241 42.308 0.00 0.00 0.00 3.18
1175 1179 6.547880 GTGTCTTCTGGTAAGGAGATGAGATA 59.452 42.308 0.00 0.00 40.34 1.98
1205 1209 6.865205 GCAAACTTGTTCTATGAAGCTTCAAT 59.135 34.615 31.55 21.16 41.13 2.57
1435 1501 4.216257 AGGCTATTGTGTGTGTGATGTTTC 59.784 41.667 0.00 0.00 0.00 2.78
1446 1512 6.037062 TGTGTGTGATGTTTCTGACTAGTTTG 59.963 38.462 0.00 0.00 0.00 2.93
1767 3153 6.841443 AATGAACGATCTGAGCTAAATCTG 57.159 37.500 0.00 0.00 0.00 2.90
1774 3710 6.920758 ACGATCTGAGCTAAATCTGATGTTAC 59.079 38.462 0.00 0.00 37.82 2.50
1979 3937 8.258007 TCTCCATCATACGTCACTAAGAAAAAT 58.742 33.333 0.00 0.00 0.00 1.82
2051 4009 1.060713 CAGAGTCAACAACGTAGCCG 58.939 55.000 0.00 0.00 40.83 5.52
2071 4029 3.837669 GCCAAACGAAACGACACAT 57.162 47.368 0.00 0.00 0.00 3.21
2074 4032 2.635444 CCAAACGAAACGACACATCAC 58.365 47.619 0.00 0.00 0.00 3.06
2080 4038 2.151202 GAAACGACACATCACCCACAT 58.849 47.619 0.00 0.00 0.00 3.21
2093 4051 2.116238 ACCCACATAGTATCAACGCCT 58.884 47.619 0.00 0.00 0.00 5.52
2096 4054 4.347000 ACCCACATAGTATCAACGCCTAAT 59.653 41.667 0.00 0.00 0.00 1.73
2179 4201 2.236766 GTAGCTGTAGCCCGAATCCTA 58.763 52.381 0.00 0.00 43.38 2.94
2184 4206 3.752665 CTGTAGCCCGAATCCTAGTAGA 58.247 50.000 0.00 0.00 0.00 2.59
2222 4244 1.623163 CCGATCCTCCTCCTTAGTCC 58.377 60.000 0.00 0.00 0.00 3.85
2284 4306 1.472480 CAATCAACGGGTTTAGCAGGG 59.528 52.381 0.00 0.00 0.00 4.45
2290 4312 2.167662 ACGGGTTTAGCAGGGAAAATG 58.832 47.619 0.00 0.00 0.00 2.32
2392 5031 0.698818 CCCCAACCAGGTTAGAAGCT 59.301 55.000 3.89 0.00 37.19 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.253044 CGGCCTTCTTCCAATCCTCA 59.747 55.000 0.00 0.00 0.00 3.86
134 137 0.458025 GTACAAGAGCCCGAACGAGG 60.458 60.000 0.00 0.00 0.00 4.63
143 146 6.234177 AGGCAGAATAATATGTACAAGAGCC 58.766 40.000 0.00 3.96 36.22 4.70
211 214 7.449247 AGTTTCTGAAGATTAGAAGCAAGACT 58.551 34.615 0.00 0.00 37.70 3.24
212 215 7.665561 AGTTTCTGAAGATTAGAAGCAAGAC 57.334 36.000 0.00 0.00 37.70 3.01
213 216 9.950496 ATTAGTTTCTGAAGATTAGAAGCAAGA 57.050 29.630 0.00 0.00 37.70 3.02
214 217 9.985318 CATTAGTTTCTGAAGATTAGAAGCAAG 57.015 33.333 0.00 0.00 37.70 4.01
216 219 7.066284 GGCATTAGTTTCTGAAGATTAGAAGCA 59.934 37.037 0.00 0.00 37.70 3.91
217 220 7.413644 GGCATTAGTTTCTGAAGATTAGAAGC 58.586 38.462 0.00 0.00 35.74 3.86
219 222 6.538742 CCGGCATTAGTTTCTGAAGATTAGAA 59.461 38.462 0.00 0.00 32.64 2.10
220 223 6.049149 CCGGCATTAGTTTCTGAAGATTAGA 58.951 40.000 0.00 0.00 0.00 2.10
221 224 5.237344 CCCGGCATTAGTTTCTGAAGATTAG 59.763 44.000 0.00 0.00 0.00 1.73
222 225 5.123227 CCCGGCATTAGTTTCTGAAGATTA 58.877 41.667 0.00 0.00 0.00 1.75
223 226 3.947834 CCCGGCATTAGTTTCTGAAGATT 59.052 43.478 0.00 0.00 0.00 2.40
224 227 3.545703 CCCGGCATTAGTTTCTGAAGAT 58.454 45.455 0.00 0.00 0.00 2.40
225 228 2.355716 CCCCGGCATTAGTTTCTGAAGA 60.356 50.000 0.00 0.00 0.00 2.87
226 229 2.017049 CCCCGGCATTAGTTTCTGAAG 58.983 52.381 0.00 0.00 0.00 3.02
227 230 1.953311 GCCCCGGCATTAGTTTCTGAA 60.953 52.381 0.00 0.00 41.49 3.02
228 231 0.393808 GCCCCGGCATTAGTTTCTGA 60.394 55.000 0.00 0.00 41.49 3.27
229 232 0.394352 AGCCCCGGCATTAGTTTCTG 60.394 55.000 8.74 0.00 44.88 3.02
230 233 0.331616 AAGCCCCGGCATTAGTTTCT 59.668 50.000 8.74 0.00 44.88 2.52
231 234 0.455815 CAAGCCCCGGCATTAGTTTC 59.544 55.000 8.74 0.00 44.88 2.78
232 235 0.039035 TCAAGCCCCGGCATTAGTTT 59.961 50.000 8.74 0.00 44.88 2.66
233 236 0.679960 GTCAAGCCCCGGCATTAGTT 60.680 55.000 8.74 0.00 44.88 2.24
234 237 1.077716 GTCAAGCCCCGGCATTAGT 60.078 57.895 8.74 0.00 44.88 2.24
235 238 2.180204 CGTCAAGCCCCGGCATTAG 61.180 63.158 8.74 0.00 44.88 1.73
236 239 1.615165 TACGTCAAGCCCCGGCATTA 61.615 55.000 8.74 0.00 44.88 1.90
237 240 2.961893 TACGTCAAGCCCCGGCATT 61.962 57.895 8.74 0.00 44.88 3.56
238 241 3.395702 TACGTCAAGCCCCGGCAT 61.396 61.111 8.74 0.00 44.88 4.40
239 242 4.382320 GTACGTCAAGCCCCGGCA 62.382 66.667 8.74 0.00 44.88 5.69
240 243 3.675619 ATGTACGTCAAGCCCCGGC 62.676 63.158 0.00 0.00 42.33 6.13
241 244 1.813753 CATGTACGTCAAGCCCCGG 60.814 63.158 0.00 0.00 0.00 5.73
242 245 0.390603 TTCATGTACGTCAAGCCCCG 60.391 55.000 0.00 0.00 0.00 5.73
243 246 1.084289 GTTCATGTACGTCAAGCCCC 58.916 55.000 0.00 0.00 0.00 5.80
244 247 1.803334 TGTTCATGTACGTCAAGCCC 58.197 50.000 0.00 0.00 0.00 5.19
245 248 5.293324 TGATAATGTTCATGTACGTCAAGCC 59.707 40.000 0.00 0.00 0.00 4.35
246 249 6.344572 TGATAATGTTCATGTACGTCAAGC 57.655 37.500 0.00 0.00 0.00 4.01
247 250 7.963981 ACTTGATAATGTTCATGTACGTCAAG 58.036 34.615 22.72 22.72 43.27 3.02
248 251 7.899178 ACTTGATAATGTTCATGTACGTCAA 57.101 32.000 0.00 5.33 33.62 3.18
249 252 7.899178 AACTTGATAATGTTCATGTACGTCA 57.101 32.000 0.00 0.00 34.10 4.35
250 253 8.048436 CGTAACTTGATAATGTTCATGTACGTC 58.952 37.037 0.00 0.00 34.10 4.34
251 254 7.009815 CCGTAACTTGATAATGTTCATGTACGT 59.990 37.037 0.00 0.00 34.10 3.57
252 255 7.009815 ACCGTAACTTGATAATGTTCATGTACG 59.990 37.037 0.00 0.00 34.10 3.67
253 256 8.193250 ACCGTAACTTGATAATGTTCATGTAC 57.807 34.615 0.00 0.00 34.10 2.90
254 257 8.780846 AACCGTAACTTGATAATGTTCATGTA 57.219 30.769 0.00 0.00 34.10 2.29
255 258 7.389330 TGAACCGTAACTTGATAATGTTCATGT 59.611 33.333 0.00 0.00 36.78 3.21
256 259 7.747888 TGAACCGTAACTTGATAATGTTCATG 58.252 34.615 0.00 0.00 36.78 3.07
257 260 7.915293 TGAACCGTAACTTGATAATGTTCAT 57.085 32.000 0.00 0.00 36.78 2.57
258 261 7.822334 AGATGAACCGTAACTTGATAATGTTCA 59.178 33.333 0.00 0.00 43.22 3.18
259 262 8.197988 AGATGAACCGTAACTTGATAATGTTC 57.802 34.615 0.00 0.00 33.32 3.18
260 263 7.010183 CGAGATGAACCGTAACTTGATAATGTT 59.990 37.037 0.00 0.00 0.00 2.71
261 264 6.475727 CGAGATGAACCGTAACTTGATAATGT 59.524 38.462 0.00 0.00 0.00 2.71
262 265 6.695713 TCGAGATGAACCGTAACTTGATAATG 59.304 38.462 0.00 0.00 0.00 1.90
263 266 6.802608 TCGAGATGAACCGTAACTTGATAAT 58.197 36.000 0.00 0.00 0.00 1.28
264 267 6.198650 TCGAGATGAACCGTAACTTGATAA 57.801 37.500 0.00 0.00 0.00 1.75
265 268 5.823209 TCGAGATGAACCGTAACTTGATA 57.177 39.130 0.00 0.00 0.00 2.15
266 269 4.713824 TCGAGATGAACCGTAACTTGAT 57.286 40.909 0.00 0.00 0.00 2.57
267 270 4.713824 ATCGAGATGAACCGTAACTTGA 57.286 40.909 0.00 0.00 0.00 3.02
268 271 6.034591 AGTAATCGAGATGAACCGTAACTTG 58.965 40.000 0.00 0.00 0.00 3.16
269 272 6.205101 AGTAATCGAGATGAACCGTAACTT 57.795 37.500 0.00 0.00 0.00 2.66
270 273 5.831702 AGTAATCGAGATGAACCGTAACT 57.168 39.130 0.00 0.00 0.00 2.24
271 274 6.723282 AGTAGTAATCGAGATGAACCGTAAC 58.277 40.000 0.00 0.00 0.00 2.50
272 275 6.932356 AGTAGTAATCGAGATGAACCGTAA 57.068 37.500 0.00 0.00 0.00 3.18
273 276 6.932356 AAGTAGTAATCGAGATGAACCGTA 57.068 37.500 0.00 0.00 0.00 4.02
274 277 5.831702 AAGTAGTAATCGAGATGAACCGT 57.168 39.130 0.00 0.00 0.00 4.83
299 302 9.162764 GTGTACTAGGACAAACACATGATTTAT 57.837 33.333 10.06 0.00 41.43 1.40
300 303 8.151596 TGTGTACTAGGACAAACACATGATTTA 58.848 33.333 10.06 0.00 45.27 1.40
301 304 6.995686 TGTGTACTAGGACAAACACATGATTT 59.004 34.615 10.06 0.00 45.27 2.17
302 305 6.530120 TGTGTACTAGGACAAACACATGATT 58.470 36.000 10.06 0.00 45.27 2.57
303 306 6.109156 TGTGTACTAGGACAAACACATGAT 57.891 37.500 10.06 0.00 45.27 2.45
304 307 5.538849 TGTGTACTAGGACAAACACATGA 57.461 39.130 10.06 0.00 45.27 3.07
308 311 4.062677 TGGTGTGTACTAGGACAAACAC 57.937 45.455 26.55 21.49 39.04 3.32
309 312 4.967084 ATGGTGTGTACTAGGACAAACA 57.033 40.909 26.55 17.65 39.04 2.83
310 313 7.389607 ACATTAATGGTGTGTACTAGGACAAAC 59.610 37.037 18.99 18.99 36.90 2.93
311 314 7.455058 ACATTAATGGTGTGTACTAGGACAAA 58.545 34.615 19.37 0.05 0.00 2.83
312 315 7.011499 ACATTAATGGTGTGTACTAGGACAA 57.989 36.000 19.37 0.00 0.00 3.18
313 316 6.614694 ACATTAATGGTGTGTACTAGGACA 57.385 37.500 19.37 2.78 0.00 4.02
314 317 7.916914 AAACATTAATGGTGTGTACTAGGAC 57.083 36.000 19.37 0.00 0.00 3.85
315 318 8.158132 TGAAAACATTAATGGTGTGTACTAGGA 58.842 33.333 19.37 0.00 0.00 2.94
316 319 8.330466 TGAAAACATTAATGGTGTGTACTAGG 57.670 34.615 19.37 0.00 0.00 3.02
319 322 9.077885 AGATTGAAAACATTAATGGTGTGTACT 57.922 29.630 19.37 6.90 0.00 2.73
320 323 9.691362 AAGATTGAAAACATTAATGGTGTGTAC 57.309 29.630 19.37 4.90 0.00 2.90
321 324 9.906660 GAAGATTGAAAACATTAATGGTGTGTA 57.093 29.630 19.37 0.00 0.00 2.90
322 325 8.641541 AGAAGATTGAAAACATTAATGGTGTGT 58.358 29.630 19.37 2.52 0.00 3.72
323 326 8.918658 CAGAAGATTGAAAACATTAATGGTGTG 58.081 33.333 19.37 0.00 0.00 3.82
324 327 8.859090 TCAGAAGATTGAAAACATTAATGGTGT 58.141 29.630 19.37 8.28 0.00 4.16
325 328 9.695526 TTCAGAAGATTGAAAACATTAATGGTG 57.304 29.630 19.37 0.00 34.32 4.17
333 336 9.798994 GCATTAGATTCAGAAGATTGAAAACAT 57.201 29.630 0.00 0.00 40.21 2.71
334 337 8.795513 TGCATTAGATTCAGAAGATTGAAAACA 58.204 29.630 0.00 0.00 40.21 2.83
335 338 9.286946 CTGCATTAGATTCAGAAGATTGAAAAC 57.713 33.333 0.00 0.00 40.21 2.43
336 339 8.464404 CCTGCATTAGATTCAGAAGATTGAAAA 58.536 33.333 0.00 0.00 40.21 2.29
337 340 7.067859 CCCTGCATTAGATTCAGAAGATTGAAA 59.932 37.037 0.00 0.00 40.21 2.69
338 341 6.544931 CCCTGCATTAGATTCAGAAGATTGAA 59.455 38.462 0.00 0.00 41.00 2.69
339 342 6.060136 CCCTGCATTAGATTCAGAAGATTGA 58.940 40.000 0.00 0.00 0.00 2.57
340 343 5.241064 CCCCTGCATTAGATTCAGAAGATTG 59.759 44.000 0.00 0.00 0.00 2.67
341 344 5.383476 CCCCTGCATTAGATTCAGAAGATT 58.617 41.667 0.00 0.00 0.00 2.40
342 345 4.202545 CCCCCTGCATTAGATTCAGAAGAT 60.203 45.833 0.00 0.00 0.00 2.40
343 346 3.137176 CCCCCTGCATTAGATTCAGAAGA 59.863 47.826 0.00 0.00 0.00 2.87
344 347 3.117738 ACCCCCTGCATTAGATTCAGAAG 60.118 47.826 0.00 0.00 0.00 2.85
345 348 2.852449 ACCCCCTGCATTAGATTCAGAA 59.148 45.455 0.00 0.00 0.00 3.02
346 349 2.492025 ACCCCCTGCATTAGATTCAGA 58.508 47.619 0.00 0.00 0.00 3.27
347 350 3.303351 AACCCCCTGCATTAGATTCAG 57.697 47.619 0.00 0.00 0.00 3.02
348 351 3.364549 CAAACCCCCTGCATTAGATTCA 58.635 45.455 0.00 0.00 0.00 2.57
349 352 2.695147 CCAAACCCCCTGCATTAGATTC 59.305 50.000 0.00 0.00 0.00 2.52
350 353 2.314549 TCCAAACCCCCTGCATTAGATT 59.685 45.455 0.00 0.00 0.00 2.40
351 354 1.929494 TCCAAACCCCCTGCATTAGAT 59.071 47.619 0.00 0.00 0.00 1.98
352 355 1.377690 TCCAAACCCCCTGCATTAGA 58.622 50.000 0.00 0.00 0.00 2.10
353 356 2.459555 ATCCAAACCCCCTGCATTAG 57.540 50.000 0.00 0.00 0.00 1.73
354 357 3.011821 TGTTATCCAAACCCCCTGCATTA 59.988 43.478 0.00 0.00 0.00 1.90
355 358 2.225496 TGTTATCCAAACCCCCTGCATT 60.225 45.455 0.00 0.00 0.00 3.56
356 359 1.360852 TGTTATCCAAACCCCCTGCAT 59.639 47.619 0.00 0.00 0.00 3.96
357 360 0.780637 TGTTATCCAAACCCCCTGCA 59.219 50.000 0.00 0.00 0.00 4.41
358 361 1.931635 TTGTTATCCAAACCCCCTGC 58.068 50.000 0.00 0.00 0.00 4.85
367 370 9.701098 CTGTTGTACTACTAGTTTGTTATCCAA 57.299 33.333 0.00 0.97 0.00 3.53
368 371 9.081204 TCTGTTGTACTACTAGTTTGTTATCCA 57.919 33.333 0.00 0.00 0.00 3.41
374 377 9.367444 GCAATATCTGTTGTACTACTAGTTTGT 57.633 33.333 0.00 3.49 0.00 2.83
375 378 8.818057 GGCAATATCTGTTGTACTACTAGTTTG 58.182 37.037 0.00 0.00 0.00 2.93
376 379 8.537016 TGGCAATATCTGTTGTACTACTAGTTT 58.463 33.333 0.00 0.00 0.00 2.66
377 380 8.074613 TGGCAATATCTGTTGTACTACTAGTT 57.925 34.615 0.00 3.39 0.00 2.24
378 381 7.560262 TCTGGCAATATCTGTTGTACTACTAGT 59.440 37.037 8.88 0.00 0.00 2.57
379 382 7.941919 TCTGGCAATATCTGTTGTACTACTAG 58.058 38.462 8.88 5.12 0.00 2.57
380 383 7.778382 TCTCTGGCAATATCTGTTGTACTACTA 59.222 37.037 8.88 0.00 0.00 1.82
381 384 6.607600 TCTCTGGCAATATCTGTTGTACTACT 59.392 38.462 8.88 0.00 0.00 2.57
382 385 6.806751 TCTCTGGCAATATCTGTTGTACTAC 58.193 40.000 0.05 0.05 0.00 2.73
383 386 7.603180 ATCTCTGGCAATATCTGTTGTACTA 57.397 36.000 0.00 0.00 0.00 1.82
384 387 5.939764 TCTCTGGCAATATCTGTTGTACT 57.060 39.130 0.00 0.00 0.00 2.73
385 388 7.210174 TGTATCTCTGGCAATATCTGTTGTAC 58.790 38.462 0.00 0.00 0.00 2.90
386 389 7.360113 TGTATCTCTGGCAATATCTGTTGTA 57.640 36.000 0.00 0.00 0.00 2.41
387 390 6.239217 TGTATCTCTGGCAATATCTGTTGT 57.761 37.500 0.00 0.00 0.00 3.32
388 391 7.558161 TTTGTATCTCTGGCAATATCTGTTG 57.442 36.000 0.00 0.00 0.00 3.33
389 392 9.499479 CTATTTGTATCTCTGGCAATATCTGTT 57.501 33.333 0.00 0.00 0.00 3.16
390 393 8.874156 TCTATTTGTATCTCTGGCAATATCTGT 58.126 33.333 0.00 0.00 0.00 3.41
391 394 9.716531 TTCTATTTGTATCTCTGGCAATATCTG 57.283 33.333 0.00 0.00 0.00 2.90
458 461 6.998673 AGCATTTTAATGGTACCAGAGGTATC 59.001 38.462 21.41 6.04 44.55 2.24
459 462 6.911308 AGCATTTTAATGGTACCAGAGGTAT 58.089 36.000 21.41 8.13 44.55 2.73
460 463 6.321821 AGCATTTTAATGGTACCAGAGGTA 57.678 37.500 21.41 6.99 44.55 3.08
461 464 5.193099 AGCATTTTAATGGTACCAGAGGT 57.807 39.130 21.41 7.99 44.55 3.85
469 472 8.271458 TGGAGAATGAGTAGCATTTTAATGGTA 58.729 33.333 9.61 9.61 46.90 3.25
470 473 7.118723 TGGAGAATGAGTAGCATTTTAATGGT 58.881 34.615 11.41 11.41 46.90 3.55
471 474 7.572523 TGGAGAATGAGTAGCATTTTAATGG 57.427 36.000 4.76 0.00 46.90 3.16
473 476 9.851686 TGTATGGAGAATGAGTAGCATTTTAAT 57.148 29.630 0.00 0.00 46.90 1.40
474 477 9.851686 ATGTATGGAGAATGAGTAGCATTTTAA 57.148 29.630 0.00 0.00 46.90 1.52
477 480 9.664332 GATATGTATGGAGAATGAGTAGCATTT 57.336 33.333 0.00 0.00 46.90 2.32
479 482 8.606754 AGATATGTATGGAGAATGAGTAGCAT 57.393 34.615 0.00 0.00 39.43 3.79
480 483 7.892771 AGAGATATGTATGGAGAATGAGTAGCA 59.107 37.037 0.00 0.00 0.00 3.49
481 484 8.292444 AGAGATATGTATGGAGAATGAGTAGC 57.708 38.462 0.00 0.00 0.00 3.58
483 486 9.813826 TGAAGAGATATGTATGGAGAATGAGTA 57.186 33.333 0.00 0.00 0.00 2.59
484 487 8.584157 GTGAAGAGATATGTATGGAGAATGAGT 58.416 37.037 0.00 0.00 0.00 3.41
485 488 8.034215 GGTGAAGAGATATGTATGGAGAATGAG 58.966 40.741 0.00 0.00 0.00 2.90
486 489 7.309438 CGGTGAAGAGATATGTATGGAGAATGA 60.309 40.741 0.00 0.00 0.00 2.57
487 490 6.810676 CGGTGAAGAGATATGTATGGAGAATG 59.189 42.308 0.00 0.00 0.00 2.67
488 491 6.573289 GCGGTGAAGAGATATGTATGGAGAAT 60.573 42.308 0.00 0.00 0.00 2.40
489 492 5.279006 GCGGTGAAGAGATATGTATGGAGAA 60.279 44.000 0.00 0.00 0.00 2.87
490 493 4.218635 GCGGTGAAGAGATATGTATGGAGA 59.781 45.833 0.00 0.00 0.00 3.71
491 494 4.489810 GCGGTGAAGAGATATGTATGGAG 58.510 47.826 0.00 0.00 0.00 3.86
492 495 3.057526 CGCGGTGAAGAGATATGTATGGA 60.058 47.826 0.00 0.00 0.00 3.41
493 496 3.245797 CGCGGTGAAGAGATATGTATGG 58.754 50.000 0.00 0.00 0.00 2.74
494 497 2.663602 GCGCGGTGAAGAGATATGTATG 59.336 50.000 8.83 0.00 0.00 2.39
495 498 2.296190 TGCGCGGTGAAGAGATATGTAT 59.704 45.455 8.83 0.00 0.00 2.29
496 499 1.679153 TGCGCGGTGAAGAGATATGTA 59.321 47.619 8.83 0.00 0.00 2.29
497 500 0.459899 TGCGCGGTGAAGAGATATGT 59.540 50.000 8.83 0.00 0.00 2.29
498 501 1.258982 GTTGCGCGGTGAAGAGATATG 59.741 52.381 8.83 0.00 0.00 1.78
499 502 1.571919 GTTGCGCGGTGAAGAGATAT 58.428 50.000 8.83 0.00 0.00 1.63
500 503 0.459585 GGTTGCGCGGTGAAGAGATA 60.460 55.000 8.83 0.00 0.00 1.98
501 504 1.741770 GGTTGCGCGGTGAAGAGAT 60.742 57.895 8.83 0.00 0.00 2.75
502 505 2.357034 GGTTGCGCGGTGAAGAGA 60.357 61.111 8.83 0.00 0.00 3.10
503 506 1.507141 AAAGGTTGCGCGGTGAAGAG 61.507 55.000 8.83 0.00 0.00 2.85
504 507 1.098712 AAAAGGTTGCGCGGTGAAGA 61.099 50.000 8.83 0.00 0.00 2.87
505 508 0.660300 GAAAAGGTTGCGCGGTGAAG 60.660 55.000 8.83 0.00 0.00 3.02
506 509 1.357334 GAAAAGGTTGCGCGGTGAA 59.643 52.632 8.83 0.00 0.00 3.18
507 510 1.781025 CTGAAAAGGTTGCGCGGTGA 61.781 55.000 8.83 0.00 0.00 4.02
508 511 1.370414 CTGAAAAGGTTGCGCGGTG 60.370 57.895 8.83 0.00 0.00 4.94
509 512 2.551912 CCTGAAAAGGTTGCGCGGT 61.552 57.895 8.83 0.00 0.00 5.68
510 513 2.255252 CCTGAAAAGGTTGCGCGG 59.745 61.111 8.83 0.00 0.00 6.46
511 514 2.429069 GCCTGAAAAGGTTGCGCG 60.429 61.111 0.00 0.00 0.00 6.86
512 515 1.241315 TAGGCCTGAAAAGGTTGCGC 61.241 55.000 17.99 0.00 0.00 6.09
513 516 1.463674 ATAGGCCTGAAAAGGTTGCG 58.536 50.000 17.99 0.00 0.00 4.85
514 517 5.598416 ATTTATAGGCCTGAAAAGGTTGC 57.402 39.130 17.99 0.00 0.00 4.17
515 518 6.540914 TCGTATTTATAGGCCTGAAAAGGTTG 59.459 38.462 17.99 7.40 0.00 3.77
516 519 6.655930 TCGTATTTATAGGCCTGAAAAGGTT 58.344 36.000 17.99 3.70 0.00 3.50
517 520 6.243216 TCGTATTTATAGGCCTGAAAAGGT 57.757 37.500 17.99 4.40 0.00 3.50
518 521 7.562454 TTTCGTATTTATAGGCCTGAAAAGG 57.438 36.000 17.99 11.44 0.00 3.11
520 523 9.841295 AGTATTTCGTATTTATAGGCCTGAAAA 57.159 29.630 17.99 15.86 0.00 2.29
521 524 9.485206 GAGTATTTCGTATTTATAGGCCTGAAA 57.515 33.333 17.99 16.09 0.00 2.69
522 525 8.867097 AGAGTATTTCGTATTTATAGGCCTGAA 58.133 33.333 17.99 6.68 0.00 3.02
523 526 8.418597 AGAGTATTTCGTATTTATAGGCCTGA 57.581 34.615 17.99 0.00 0.00 3.86
524 527 8.524487 AGAGAGTATTTCGTATTTATAGGCCTG 58.476 37.037 17.99 0.00 0.00 4.85
525 528 8.653036 AGAGAGTATTTCGTATTTATAGGCCT 57.347 34.615 11.78 11.78 0.00 5.19
609 612 9.132923 TGACATATACTCTCTCCGTAAAGAAAT 57.867 33.333 0.00 0.00 0.00 2.17
610 613 8.515695 TGACATATACTCTCTCCGTAAAGAAA 57.484 34.615 0.00 0.00 0.00 2.52
611 614 8.515695 TTGACATATACTCTCTCCGTAAAGAA 57.484 34.615 0.00 0.00 0.00 2.52
612 615 7.991460 TCTTGACATATACTCTCTCCGTAAAGA 59.009 37.037 0.00 0.00 0.00 2.52
613 616 8.155821 TCTTGACATATACTCTCTCCGTAAAG 57.844 38.462 0.00 0.00 0.00 1.85
614 617 8.693120 ATCTTGACATATACTCTCTCCGTAAA 57.307 34.615 0.00 0.00 0.00 2.01
615 618 8.568794 CAATCTTGACATATACTCTCTCCGTAA 58.431 37.037 0.00 0.00 0.00 3.18
616 619 7.937394 TCAATCTTGACATATACTCTCTCCGTA 59.063 37.037 0.00 0.00 31.01 4.02
617 620 6.773200 TCAATCTTGACATATACTCTCTCCGT 59.227 38.462 0.00 0.00 31.01 4.69
618 621 7.208225 TCAATCTTGACATATACTCTCTCCG 57.792 40.000 0.00 0.00 31.01 4.63
619 622 9.995003 AAATCAATCTTGACATATACTCTCTCC 57.005 33.333 0.00 0.00 40.49 3.71
628 631 8.856103 TGCATCATGAAATCAATCTTGACATAT 58.144 29.630 0.00 0.00 40.49 1.78
629 632 8.228035 TGCATCATGAAATCAATCTTGACATA 57.772 30.769 0.00 0.00 40.49 2.29
630 633 7.107639 TGCATCATGAAATCAATCTTGACAT 57.892 32.000 0.00 0.00 40.49 3.06
631 634 6.518208 TGCATCATGAAATCAATCTTGACA 57.482 33.333 0.00 0.00 40.49 3.58
632 635 7.821595 TTTGCATCATGAAATCAATCTTGAC 57.178 32.000 0.00 0.00 40.49 3.18
633 636 8.878769 CAATTTGCATCATGAAATCAATCTTGA 58.121 29.630 0.00 0.00 42.14 3.02
634 637 8.878769 TCAATTTGCATCATGAAATCAATCTTG 58.121 29.630 0.00 10.55 0.00 3.02
635 638 9.098355 CTCAATTTGCATCATGAAATCAATCTT 57.902 29.630 0.00 0.00 0.00 2.40
636 639 7.224753 GCTCAATTTGCATCATGAAATCAATCT 59.775 33.333 0.00 0.00 0.00 2.40
637 640 7.345192 GCTCAATTTGCATCATGAAATCAATC 58.655 34.615 0.00 0.00 0.00 2.67
638 641 6.019075 CGCTCAATTTGCATCATGAAATCAAT 60.019 34.615 0.00 0.00 0.00 2.57
639 642 5.289917 CGCTCAATTTGCATCATGAAATCAA 59.710 36.000 0.00 1.44 0.00 2.57
640 643 4.801516 CGCTCAATTTGCATCATGAAATCA 59.198 37.500 0.00 0.00 0.00 2.57
641 644 4.802039 ACGCTCAATTTGCATCATGAAATC 59.198 37.500 0.00 0.00 0.00 2.17
642 645 4.751060 ACGCTCAATTTGCATCATGAAAT 58.249 34.783 0.00 0.00 0.00 2.17
643 646 4.177165 ACGCTCAATTTGCATCATGAAA 57.823 36.364 0.00 0.00 0.00 2.69
644 647 3.853831 ACGCTCAATTTGCATCATGAA 57.146 38.095 0.00 0.00 0.00 2.57
645 648 3.242837 GCTACGCTCAATTTGCATCATGA 60.243 43.478 0.00 0.00 0.00 3.07
646 649 3.040795 GCTACGCTCAATTTGCATCATG 58.959 45.455 0.00 0.00 0.00 3.07
647 650 2.947652 AGCTACGCTCAATTTGCATCAT 59.052 40.909 0.00 0.00 30.62 2.45
648 651 2.358957 AGCTACGCTCAATTTGCATCA 58.641 42.857 0.00 0.00 30.62 3.07
649 652 3.411415 AAGCTACGCTCAATTTGCATC 57.589 42.857 0.00 0.00 38.25 3.91
650 653 4.191544 TCTAAGCTACGCTCAATTTGCAT 58.808 39.130 0.00 0.00 38.25 3.96
651 654 3.595173 TCTAAGCTACGCTCAATTTGCA 58.405 40.909 0.00 0.00 38.25 4.08
652 655 4.521943 CATCTAAGCTACGCTCAATTTGC 58.478 43.478 0.00 0.00 38.25 3.68
653 656 4.572389 ACCATCTAAGCTACGCTCAATTTG 59.428 41.667 0.00 0.00 38.25 2.32
654 657 4.770795 ACCATCTAAGCTACGCTCAATTT 58.229 39.130 0.00 0.00 38.25 1.82
655 658 4.408182 ACCATCTAAGCTACGCTCAATT 57.592 40.909 0.00 0.00 38.25 2.32
656 659 4.408182 AACCATCTAAGCTACGCTCAAT 57.592 40.909 0.00 0.00 38.25 2.57
657 660 3.887621 AACCATCTAAGCTACGCTCAA 57.112 42.857 0.00 0.00 38.25 3.02
658 661 3.318275 CCTAACCATCTAAGCTACGCTCA 59.682 47.826 0.00 0.00 38.25 4.26
659 662 3.318557 ACCTAACCATCTAAGCTACGCTC 59.681 47.826 0.00 0.00 38.25 5.03
660 663 3.297736 ACCTAACCATCTAAGCTACGCT 58.702 45.455 0.00 0.00 42.56 5.07
661 664 3.729862 ACCTAACCATCTAAGCTACGC 57.270 47.619 0.00 0.00 0.00 4.42
662 665 5.416947 ACAAACCTAACCATCTAAGCTACG 58.583 41.667 0.00 0.00 0.00 3.51
663 666 6.093633 CCAACAAACCTAACCATCTAAGCTAC 59.906 42.308 0.00 0.00 0.00 3.58
664 667 6.177610 CCAACAAACCTAACCATCTAAGCTA 58.822 40.000 0.00 0.00 0.00 3.32
665 668 5.010282 CCAACAAACCTAACCATCTAAGCT 58.990 41.667 0.00 0.00 0.00 3.74
666 669 4.765339 ACCAACAAACCTAACCATCTAAGC 59.235 41.667 0.00 0.00 0.00 3.09
667 670 5.183140 CCACCAACAAACCTAACCATCTAAG 59.817 44.000 0.00 0.00 0.00 2.18
668 671 5.074115 CCACCAACAAACCTAACCATCTAA 58.926 41.667 0.00 0.00 0.00 2.10
669 672 4.351407 TCCACCAACAAACCTAACCATCTA 59.649 41.667 0.00 0.00 0.00 1.98
670 673 3.139397 TCCACCAACAAACCTAACCATCT 59.861 43.478 0.00 0.00 0.00 2.90
671 674 3.492337 TCCACCAACAAACCTAACCATC 58.508 45.455 0.00 0.00 0.00 3.51
672 675 3.603965 TCCACCAACAAACCTAACCAT 57.396 42.857 0.00 0.00 0.00 3.55
673 676 3.383698 TTCCACCAACAAACCTAACCA 57.616 42.857 0.00 0.00 0.00 3.67
674 677 3.892588 TGATTCCACCAACAAACCTAACC 59.107 43.478 0.00 0.00 0.00 2.85
675 678 4.558697 GCTGATTCCACCAACAAACCTAAC 60.559 45.833 0.00 0.00 0.00 2.34
676 679 3.572255 GCTGATTCCACCAACAAACCTAA 59.428 43.478 0.00 0.00 0.00 2.69
677 680 3.153919 GCTGATTCCACCAACAAACCTA 58.846 45.455 0.00 0.00 0.00 3.08
678 681 1.963515 GCTGATTCCACCAACAAACCT 59.036 47.619 0.00 0.00 0.00 3.50
679 682 1.000843 GGCTGATTCCACCAACAAACC 59.999 52.381 0.00 0.00 0.00 3.27
680 683 1.000843 GGGCTGATTCCACCAACAAAC 59.999 52.381 0.00 0.00 0.00 2.93
681 684 1.337118 GGGCTGATTCCACCAACAAA 58.663 50.000 0.00 0.00 0.00 2.83
682 685 0.187117 TGGGCTGATTCCACCAACAA 59.813 50.000 0.00 0.00 0.00 2.83
683 686 0.539438 GTGGGCTGATTCCACCAACA 60.539 55.000 2.07 0.00 46.58 3.33
684 687 2.267045 GTGGGCTGATTCCACCAAC 58.733 57.895 2.07 0.00 46.58 3.77
685 688 4.841441 GTGGGCTGATTCCACCAA 57.159 55.556 2.07 0.00 46.58 3.67
689 692 3.089838 CCTGGTGGGCTGATTCCA 58.910 61.111 0.00 0.00 0.00 3.53
699 702 2.637872 TCTAAGACTTGAACCCTGGTGG 59.362 50.000 0.00 0.00 41.37 4.61
700 703 3.071023 TGTCTAAGACTTGAACCCTGGTG 59.929 47.826 0.00 0.00 33.15 4.17
701 704 3.314693 TGTCTAAGACTTGAACCCTGGT 58.685 45.455 0.00 0.00 33.15 4.00
702 705 4.065789 GTTGTCTAAGACTTGAACCCTGG 58.934 47.826 0.00 0.00 33.15 4.45
703 706 4.962155 AGTTGTCTAAGACTTGAACCCTG 58.038 43.478 0.00 0.00 33.15 4.45
704 707 6.742559 TTAGTTGTCTAAGACTTGAACCCT 57.257 37.500 0.00 0.00 33.00 4.34
705 708 6.128254 GCATTAGTTGTCTAAGACTTGAACCC 60.128 42.308 0.00 0.00 39.17 4.11
706 709 6.128254 GGCATTAGTTGTCTAAGACTTGAACC 60.128 42.308 0.00 0.00 39.17 3.62
707 710 6.426937 TGGCATTAGTTGTCTAAGACTTGAAC 59.573 38.462 0.00 0.00 39.17 3.18
708 711 6.530120 TGGCATTAGTTGTCTAAGACTTGAA 58.470 36.000 0.00 0.00 39.17 2.69
709 712 6.109156 TGGCATTAGTTGTCTAAGACTTGA 57.891 37.500 0.00 0.00 39.17 3.02
710 713 5.934625 ACTGGCATTAGTTGTCTAAGACTTG 59.065 40.000 0.00 0.00 39.17 3.16
711 714 6.014156 AGACTGGCATTAGTTGTCTAAGACTT 60.014 38.462 3.29 0.00 39.17 3.01
712 715 5.482175 AGACTGGCATTAGTTGTCTAAGACT 59.518 40.000 3.29 0.00 39.17 3.24
713 716 5.725362 AGACTGGCATTAGTTGTCTAAGAC 58.275 41.667 3.29 0.00 39.17 3.01
714 717 6.360370 AAGACTGGCATTAGTTGTCTAAGA 57.640 37.500 5.40 0.00 39.17 2.10
715 718 7.489757 GTCTAAGACTGGCATTAGTTGTCTAAG 59.510 40.741 5.40 0.00 39.17 2.18
716 719 7.039293 TGTCTAAGACTGGCATTAGTTGTCTAA 60.039 37.037 5.40 0.00 37.05 2.10
717 720 6.436218 TGTCTAAGACTGGCATTAGTTGTCTA 59.564 38.462 5.40 0.00 37.05 2.59
718 721 5.246203 TGTCTAAGACTGGCATTAGTTGTCT 59.754 40.000 6.32 3.17 39.35 3.41
719 722 5.479306 TGTCTAAGACTGGCATTAGTTGTC 58.521 41.667 6.32 1.01 33.15 3.18
720 723 5.483685 TGTCTAAGACTGGCATTAGTTGT 57.516 39.130 6.32 0.00 33.15 3.32
721 724 5.122396 GGTTGTCTAAGACTGGCATTAGTTG 59.878 44.000 6.32 0.00 33.15 3.16
722 725 5.221843 TGGTTGTCTAAGACTGGCATTAGTT 60.222 40.000 6.32 0.00 33.15 2.24
723 726 4.286032 TGGTTGTCTAAGACTGGCATTAGT 59.714 41.667 6.32 0.00 33.15 2.24
724 727 4.832248 TGGTTGTCTAAGACTGGCATTAG 58.168 43.478 0.83 0.83 33.15 1.73
725 728 4.901197 TGGTTGTCTAAGACTGGCATTA 57.099 40.909 0.00 0.00 33.15 1.90
726 729 3.788227 TGGTTGTCTAAGACTGGCATT 57.212 42.857 0.00 0.00 33.15 3.56
727 730 3.788227 TTGGTTGTCTAAGACTGGCAT 57.212 42.857 0.00 0.00 33.15 4.40
728 731 3.788227 ATTGGTTGTCTAAGACTGGCA 57.212 42.857 0.00 0.00 33.15 4.92
729 732 4.575885 TGTATTGGTTGTCTAAGACTGGC 58.424 43.478 0.00 0.00 33.15 4.85
730 733 6.147821 CACTTGTATTGGTTGTCTAAGACTGG 59.852 42.308 0.00 0.00 33.15 4.00
731 734 6.347725 GCACTTGTATTGGTTGTCTAAGACTG 60.348 42.308 0.00 0.00 33.15 3.51
732 735 5.701290 GCACTTGTATTGGTTGTCTAAGACT 59.299 40.000 0.00 0.00 33.15 3.24
733 736 5.701290 AGCACTTGTATTGGTTGTCTAAGAC 59.299 40.000 0.00 0.00 0.00 3.01
734 737 5.865085 AGCACTTGTATTGGTTGTCTAAGA 58.135 37.500 0.00 0.00 0.00 2.10
735 738 5.700832 TGAGCACTTGTATTGGTTGTCTAAG 59.299 40.000 0.00 0.00 0.00 2.18
736 739 5.468746 GTGAGCACTTGTATTGGTTGTCTAA 59.531 40.000 0.00 0.00 0.00 2.10
737 740 4.994852 GTGAGCACTTGTATTGGTTGTCTA 59.005 41.667 0.00 0.00 0.00 2.59
738 741 3.815401 GTGAGCACTTGTATTGGTTGTCT 59.185 43.478 0.00 0.00 0.00 3.41
739 742 3.563808 TGTGAGCACTTGTATTGGTTGTC 59.436 43.478 1.99 0.00 0.00 3.18
740 743 3.550820 TGTGAGCACTTGTATTGGTTGT 58.449 40.909 1.99 0.00 0.00 3.32
741 744 4.771590 ATGTGAGCACTTGTATTGGTTG 57.228 40.909 1.99 0.00 0.00 3.77
742 745 5.789643 AAATGTGAGCACTTGTATTGGTT 57.210 34.783 1.99 0.00 0.00 3.67
743 746 5.789643 AAAATGTGAGCACTTGTATTGGT 57.210 34.783 1.99 0.00 0.00 3.67
744 747 6.364165 CAGAAAAATGTGAGCACTTGTATTGG 59.636 38.462 1.99 0.00 0.00 3.16
745 748 7.140705 TCAGAAAAATGTGAGCACTTGTATTG 58.859 34.615 1.99 0.00 0.00 1.90
746 749 7.275888 TCAGAAAAATGTGAGCACTTGTATT 57.724 32.000 1.99 0.00 0.00 1.89
747 750 6.882610 TCAGAAAAATGTGAGCACTTGTAT 57.117 33.333 1.99 0.00 0.00 2.29
748 751 6.691754 TTCAGAAAAATGTGAGCACTTGTA 57.308 33.333 1.99 0.00 0.00 2.41
749 752 5.581126 TTCAGAAAAATGTGAGCACTTGT 57.419 34.783 1.99 0.00 0.00 3.16
750 753 7.473027 AAATTCAGAAAAATGTGAGCACTTG 57.527 32.000 1.99 0.00 0.00 3.16
751 754 9.768662 AATAAATTCAGAAAAATGTGAGCACTT 57.231 25.926 1.99 0.00 0.00 3.16
752 755 9.768662 AAATAAATTCAGAAAAATGTGAGCACT 57.231 25.926 1.99 0.00 0.00 4.40
754 757 9.761504 TGAAATAAATTCAGAAAAATGTGAGCA 57.238 25.926 0.00 0.00 43.08 4.26
768 771 5.391523 CGTCGGAAAGCCTGAAATAAATTCA 60.392 40.000 0.00 0.00 45.71 2.57
769 772 5.028375 CGTCGGAAAGCCTGAAATAAATTC 58.972 41.667 0.00 0.00 38.60 2.17
770 773 4.698304 TCGTCGGAAAGCCTGAAATAAATT 59.302 37.500 0.00 0.00 0.00 1.82
771 774 4.258543 TCGTCGGAAAGCCTGAAATAAAT 58.741 39.130 0.00 0.00 0.00 1.40
772 775 3.666274 TCGTCGGAAAGCCTGAAATAAA 58.334 40.909 0.00 0.00 0.00 1.40
773 776 3.322211 TCGTCGGAAAGCCTGAAATAA 57.678 42.857 0.00 0.00 0.00 1.40
774 777 3.194861 CATCGTCGGAAAGCCTGAAATA 58.805 45.455 0.00 0.00 0.00 1.40
775 778 2.009774 CATCGTCGGAAAGCCTGAAAT 58.990 47.619 0.00 0.00 0.00 2.17
776 779 1.270625 ACATCGTCGGAAAGCCTGAAA 60.271 47.619 0.00 0.00 0.00 2.69
777 780 0.320374 ACATCGTCGGAAAGCCTGAA 59.680 50.000 0.00 0.00 0.00 3.02
778 781 0.108804 GACATCGTCGGAAAGCCTGA 60.109 55.000 0.00 0.00 0.00 3.86
779 782 0.108615 AGACATCGTCGGAAAGCCTG 60.109 55.000 0.00 0.00 37.67 4.85
780 783 0.108615 CAGACATCGTCGGAAAGCCT 60.109 55.000 0.00 0.00 37.67 4.58
781 784 0.389948 ACAGACATCGTCGGAAAGCC 60.390 55.000 1.24 0.00 37.67 4.35
782 785 1.390463 GAACAGACATCGTCGGAAAGC 59.610 52.381 1.24 0.00 37.67 3.51
783 786 2.663602 CTGAACAGACATCGTCGGAAAG 59.336 50.000 1.24 0.00 37.67 2.62
784 787 2.035449 ACTGAACAGACATCGTCGGAAA 59.965 45.455 8.87 0.00 37.67 3.13
785 788 1.611977 ACTGAACAGACATCGTCGGAA 59.388 47.619 8.87 0.00 37.67 4.30
786 789 1.068541 CACTGAACAGACATCGTCGGA 60.069 52.381 8.87 0.00 37.67 4.55
787 790 1.340658 CACTGAACAGACATCGTCGG 58.659 55.000 8.87 0.00 37.67 4.79
788 791 0.710567 GCACTGAACAGACATCGTCG 59.289 55.000 8.87 0.00 37.67 5.12
789 792 0.710567 CGCACTGAACAGACATCGTC 59.289 55.000 8.87 0.00 0.00 4.20
790 793 0.313987 TCGCACTGAACAGACATCGT 59.686 50.000 8.87 0.00 0.00 3.73
791 794 0.987715 CTCGCACTGAACAGACATCG 59.012 55.000 8.87 6.23 0.00 3.84
792 795 1.067565 TCCTCGCACTGAACAGACATC 60.068 52.381 8.87 0.00 0.00 3.06
793 796 0.969149 TCCTCGCACTGAACAGACAT 59.031 50.000 8.87 0.00 0.00 3.06
794 797 0.315251 CTCCTCGCACTGAACAGACA 59.685 55.000 8.87 0.00 0.00 3.41
795 798 0.598562 TCTCCTCGCACTGAACAGAC 59.401 55.000 8.87 0.00 0.00 3.51
796 799 1.203287 CATCTCCTCGCACTGAACAGA 59.797 52.381 8.87 0.00 0.00 3.41
797 800 1.067283 ACATCTCCTCGCACTGAACAG 60.067 52.381 0.00 0.00 0.00 3.16
798 801 0.969149 ACATCTCCTCGCACTGAACA 59.031 50.000 0.00 0.00 0.00 3.18
799 802 2.086054 AACATCTCCTCGCACTGAAC 57.914 50.000 0.00 0.00 0.00 3.18
800 803 3.953712 TTAACATCTCCTCGCACTGAA 57.046 42.857 0.00 0.00 0.00 3.02
801 804 4.471904 AATTAACATCTCCTCGCACTGA 57.528 40.909 0.00 0.00 0.00 3.41
802 805 5.352284 ACTAATTAACATCTCCTCGCACTG 58.648 41.667 0.00 0.00 0.00 3.66
803 806 5.599999 ACTAATTAACATCTCCTCGCACT 57.400 39.130 0.00 0.00 0.00 4.40
804 807 6.238130 GGAAACTAATTAACATCTCCTCGCAC 60.238 42.308 0.00 0.00 0.00 5.34
805 808 5.815740 GGAAACTAATTAACATCTCCTCGCA 59.184 40.000 0.00 0.00 0.00 5.10
806 809 6.049790 AGGAAACTAATTAACATCTCCTCGC 58.950 40.000 0.00 0.00 40.61 5.03
807 810 8.414778 AGTAGGAAACTAATTAACATCTCCTCG 58.585 37.037 0.00 0.00 46.54 4.63
836 839 8.910666 CGAAAATTGCACATTTCTAATACACAA 58.089 29.630 16.93 0.00 34.22 3.33
837 840 8.293157 TCGAAAATTGCACATTTCTAATACACA 58.707 29.630 16.93 0.00 34.22 3.72
838 841 8.575454 GTCGAAAATTGCACATTTCTAATACAC 58.425 33.333 16.93 5.14 34.22 2.90
839 842 8.293157 TGTCGAAAATTGCACATTTCTAATACA 58.707 29.630 16.93 13.27 34.22 2.29
840 843 8.667987 TGTCGAAAATTGCACATTTCTAATAC 57.332 30.769 16.93 11.65 34.22 1.89
841 844 9.123709 GTTGTCGAAAATTGCACATTTCTAATA 57.876 29.630 16.93 5.48 34.22 0.98
842 845 7.867403 AGTTGTCGAAAATTGCACATTTCTAAT 59.133 29.630 16.93 1.02 34.22 1.73
843 846 7.199766 AGTTGTCGAAAATTGCACATTTCTAA 58.800 30.769 16.93 9.50 34.22 2.10
844 847 6.734137 AGTTGTCGAAAATTGCACATTTCTA 58.266 32.000 16.93 7.39 34.22 2.10
845 848 5.591099 AGTTGTCGAAAATTGCACATTTCT 58.409 33.333 16.93 5.75 34.22 2.52
846 849 5.888412 AGTTGTCGAAAATTGCACATTTC 57.112 34.783 11.59 11.59 33.28 2.17
847 850 7.569226 GCATTAGTTGTCGAAAATTGCACATTT 60.569 33.333 9.35 0.00 0.00 2.32
848 851 6.128849 GCATTAGTTGTCGAAAATTGCACATT 60.129 34.615 9.35 0.00 0.00 2.71
849 852 5.345741 GCATTAGTTGTCGAAAATTGCACAT 59.654 36.000 9.35 0.00 0.00 3.21
850 853 4.679197 GCATTAGTTGTCGAAAATTGCACA 59.321 37.500 9.35 0.00 0.00 4.57
851 854 4.089923 GGCATTAGTTGTCGAAAATTGCAC 59.910 41.667 13.80 0.00 0.00 4.57
852 855 4.233789 GGCATTAGTTGTCGAAAATTGCA 58.766 39.130 13.80 0.00 0.00 4.08
853 856 4.233789 TGGCATTAGTTGTCGAAAATTGC 58.766 39.130 0.00 0.00 30.28 3.56
854 857 5.460646 ACTGGCATTAGTTGTCGAAAATTG 58.539 37.500 0.00 0.00 30.28 2.32
855 858 5.705609 ACTGGCATTAGTTGTCGAAAATT 57.294 34.783 0.00 0.00 30.28 1.82
856 859 7.250569 CAATACTGGCATTAGTTGTCGAAAAT 58.749 34.615 0.00 0.00 30.28 1.82
857 860 6.348950 CCAATACTGGCATTAGTTGTCGAAAA 60.349 38.462 0.00 0.00 35.39 2.29
858 861 5.123186 CCAATACTGGCATTAGTTGTCGAAA 59.877 40.000 0.00 0.00 35.39 3.46
859 862 4.634004 CCAATACTGGCATTAGTTGTCGAA 59.366 41.667 0.00 0.00 35.39 3.71
860 863 4.081365 TCCAATACTGGCATTAGTTGTCGA 60.081 41.667 0.00 0.00 43.17 4.20
861 864 4.188462 TCCAATACTGGCATTAGTTGTCG 58.812 43.478 0.00 0.00 43.17 4.35
862 865 7.986085 ATATCCAATACTGGCATTAGTTGTC 57.014 36.000 0.00 0.00 43.17 3.18
863 866 8.103305 CCTATATCCAATACTGGCATTAGTTGT 58.897 37.037 0.00 0.00 43.17 3.32
864 867 8.321353 TCCTATATCCAATACTGGCATTAGTTG 58.679 37.037 0.00 0.00 43.17 3.16
865 868 8.449423 TCCTATATCCAATACTGGCATTAGTT 57.551 34.615 0.00 0.00 43.17 2.24
866 869 8.489489 CATCCTATATCCAATACTGGCATTAGT 58.511 37.037 0.00 0.00 43.17 2.24
867 870 8.708378 TCATCCTATATCCAATACTGGCATTAG 58.292 37.037 0.00 0.00 43.17 1.73
868 871 8.622572 TCATCCTATATCCAATACTGGCATTA 57.377 34.615 0.00 0.00 43.17 1.90
869 872 7.515004 TCATCCTATATCCAATACTGGCATT 57.485 36.000 0.00 0.00 43.17 3.56
870 873 7.037370 TGTTCATCCTATATCCAATACTGGCAT 60.037 37.037 0.00 0.00 43.17 4.40
871 874 6.272090 TGTTCATCCTATATCCAATACTGGCA 59.728 38.462 0.00 0.00 43.17 4.92
872 875 6.595716 GTGTTCATCCTATATCCAATACTGGC 59.404 42.308 0.00 0.00 43.17 4.85
873 876 7.911651 AGTGTTCATCCTATATCCAATACTGG 58.088 38.462 0.00 0.00 45.08 4.00
874 877 9.862371 GTAGTGTTCATCCTATATCCAATACTG 57.138 37.037 0.00 0.00 0.00 2.74
875 878 9.830186 AGTAGTGTTCATCCTATATCCAATACT 57.170 33.333 0.00 0.00 30.25 2.12
878 881 9.601810 TGTAGTAGTGTTCATCCTATATCCAAT 57.398 33.333 0.00 0.00 0.00 3.16
879 882 9.601810 ATGTAGTAGTGTTCATCCTATATCCAA 57.398 33.333 0.00 0.00 0.00 3.53
880 883 9.601810 AATGTAGTAGTGTTCATCCTATATCCA 57.398 33.333 0.00 0.00 0.00 3.41
885 888 9.765795 GCTTTAATGTAGTAGTGTTCATCCTAT 57.234 33.333 0.00 0.00 0.00 2.57
886 889 8.978472 AGCTTTAATGTAGTAGTGTTCATCCTA 58.022 33.333 0.00 0.00 0.00 2.94
887 890 7.852263 AGCTTTAATGTAGTAGTGTTCATCCT 58.148 34.615 0.00 0.00 0.00 3.24
888 891 9.765795 ATAGCTTTAATGTAGTAGTGTTCATCC 57.234 33.333 0.00 0.00 0.00 3.51
931 934 5.060662 TCCACACTTATCTGTTCTTCTCG 57.939 43.478 0.00 0.00 0.00 4.04
995 998 8.028938 GGATATTTTTCATTTGCGGCATAGTAT 58.971 33.333 2.28 0.00 0.00 2.12
1045 1049 7.754924 GTCTTGGTTTATGTGGACATGTATTTG 59.245 37.037 0.00 0.00 37.15 2.32
1175 1179 5.922544 GCTTCATAGAACAAGTTTGCAACAT 59.077 36.000 0.00 0.00 0.00 2.71
1205 1209 9.453572 GAAGCAATGTATGGAAGGATCATTATA 57.546 33.333 0.00 0.00 0.00 0.98
1435 1501 5.646577 ACTAGCAGTACCAAACTAGTCAG 57.353 43.478 0.00 0.00 41.00 3.51
1561 1646 8.784043 AGTAACTGATGTGTTGGAGTATTTTTC 58.216 33.333 0.00 0.00 0.00 2.29
1979 3937 7.309194 GCTCTGGCCTTTTCTCTAAAACAAATA 60.309 37.037 3.32 0.00 31.37 1.40
1984 3942 4.427096 GCTCTGGCCTTTTCTCTAAAAC 57.573 45.455 3.32 0.00 31.37 2.43
2024 3982 0.819259 TTGTTGACTCTGCCTGGTGC 60.819 55.000 0.00 0.00 41.77 5.01
2038 3996 4.439472 GGCGCGGCTACGTTGTTG 62.439 66.667 27.05 0.00 43.45 3.33
2051 4009 2.001880 GTGTCGTTTCGTTTGGCGC 61.002 57.895 0.00 0.00 41.07 6.53
2069 4027 3.494626 GCGTTGATACTATGTGGGTGATG 59.505 47.826 0.00 0.00 0.00 3.07
2071 4029 2.159014 GGCGTTGATACTATGTGGGTGA 60.159 50.000 0.00 0.00 0.00 4.02
2074 4032 2.910688 AGGCGTTGATACTATGTGGG 57.089 50.000 0.00 0.00 0.00 4.61
2080 4038 3.551454 GCCGTGATTAGGCGTTGATACTA 60.551 47.826 0.00 0.00 45.58 1.82
2093 4051 5.333492 CGTTAACTTCTGTTTGCCGTGATTA 60.333 40.000 3.71 0.00 37.59 1.75
2096 4054 2.285756 CGTTAACTTCTGTTTGCCGTGA 59.714 45.455 3.71 0.00 37.59 4.35
2145 4167 0.324830 AGCTACCTCCCTTCTTCGCT 60.325 55.000 0.00 0.00 0.00 4.93
2146 4168 0.179097 CAGCTACCTCCCTTCTTCGC 60.179 60.000 0.00 0.00 0.00 4.70
2150 4172 1.689892 GGCTACAGCTACCTCCCTTCT 60.690 57.143 0.54 0.00 41.70 2.85
2179 4201 6.939163 GGGATGCTTTTGATGATATGTCTACT 59.061 38.462 0.00 0.00 0.00 2.57
2184 4206 4.717877 TCGGGATGCTTTTGATGATATGT 58.282 39.130 0.00 0.00 0.00 2.29
2222 4244 2.158856 TCCTGCAGCAGTGGAGATTATG 60.159 50.000 21.26 1.78 44.77 1.90
2284 4306 8.419076 ACAAGTTTACCATTGAACACATTTTC 57.581 30.769 0.00 0.00 0.00 2.29
2290 4312 6.144078 AGGAACAAGTTTACCATTGAACAC 57.856 37.500 0.00 0.00 0.00 3.32
2392 5031 6.040616 ACTCCTTCTCAGAACTTCGTCTTTTA 59.959 38.462 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.