Multiple sequence alignment - TraesCS4D01G271900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G271900 chr4D 100.000 2889 0 0 1 2889 442395073 442397961 0.000000e+00 5336.0
1 TraesCS4D01G271900 chr4D 91.398 1581 98 24 582 2144 442223441 442221881 0.000000e+00 2132.0
2 TraesCS4D01G271900 chr4D 88.943 1646 133 34 581 2202 442249242 442247622 0.000000e+00 1986.0
3 TraesCS4D01G271900 chr4D 87.956 1453 126 27 610 2028 442215766 442214329 0.000000e+00 1668.0
4 TraesCS4D01G271900 chr4D 80.862 1416 182 51 522 1889 441255406 441256780 0.000000e+00 1031.0
5 TraesCS4D01G271900 chr4D 90.551 381 33 3 2369 2746 442220317 442219937 4.300000e-138 501.0
6 TraesCS4D01G271900 chr4D 86.175 217 24 6 209 421 442223763 442223549 2.240000e-56 230.0
7 TraesCS4D01G271900 chr4D 85.780 218 25 6 208 421 442249564 442249349 2.900000e-55 226.0
8 TraesCS4D01G271900 chr4D 83.534 249 22 2 2497 2745 442247087 442246858 6.270000e-52 215.0
9 TraesCS4D01G271900 chr4D 96.226 106 4 0 2744 2849 442246827 442246722 1.060000e-39 174.0
10 TraesCS4D01G271900 chr4D 93.805 113 7 0 2744 2856 442219907 442219795 1.380000e-38 171.0
11 TraesCS4D01G271900 chr4D 88.636 88 9 1 2 89 32135530 32135444 3.940000e-19 106.0
12 TraesCS4D01G271900 chr4D 98.039 51 1 0 209 259 442224024 442223974 3.970000e-14 89.8
13 TraesCS4D01G271900 chr4D 83.019 106 9 3 103 208 442216237 442216141 1.430000e-13 87.9
14 TraesCS4D01G271900 chr4B 92.578 2048 108 18 86 2115 550501905 550503926 0.000000e+00 2900.0
15 TraesCS4D01G271900 chr4B 88.472 1414 121 23 639 2031 550433451 550432059 0.000000e+00 1670.0
16 TraesCS4D01G271900 chr4B 92.239 1005 69 7 1204 2203 550487550 550486550 0.000000e+00 1415.0
17 TraesCS4D01G271900 chr4B 88.300 547 49 11 653 1193 550488298 550487761 2.430000e-180 641.0
18 TraesCS4D01G271900 chr4B 89.628 376 36 2 2374 2746 550486554 550486179 2.600000e-130 475.0
19 TraesCS4D01G271900 chr4B 82.258 248 33 6 208 445 550489237 550488991 1.360000e-48 204.0
20 TraesCS4D01G271900 chr4B 95.146 103 5 0 2754 2856 550486139 550486037 2.300000e-36 163.0
21 TraesCS4D01G271900 chr4B 90.805 87 8 0 1 87 623406509 623406423 1.820000e-22 117.0
22 TraesCS4D01G271900 chr4A 91.018 1759 113 25 472 2206 24919987 24918250 0.000000e+00 2331.0
23 TraesCS4D01G271900 chr4A 90.473 1459 104 22 583 2028 24935155 24936591 0.000000e+00 1892.0
24 TraesCS4D01G271900 chr4A 80.687 1455 195 48 487 1889 26324771 26323351 0.000000e+00 1051.0
25 TraesCS4D01G271900 chr4A 87.574 169 20 1 2202 2369 655142108 655141940 8.170000e-46 195.0
26 TraesCS4D01G271900 chr4A 91.304 92 8 0 214 305 24920351 24920260 3.020000e-25 126.0
27 TraesCS4D01G271900 chr4A 81.818 88 16 0 1 88 4486797 4486884 1.110000e-09 75.0
28 TraesCS4D01G271900 chr5D 81.390 1295 168 38 642 1889 544798728 544799996 0.000000e+00 989.0
29 TraesCS4D01G271900 chr5D 89.759 166 16 1 2205 2369 75416420 75416255 8.110000e-51 211.0
30 TraesCS4D01G271900 chr5D 89.157 166 16 2 2204 2369 443911788 443911625 3.770000e-49 206.0
31 TraesCS4D01G271900 chr5D 92.105 38 3 0 217 254 544810929 544810966 1.000000e-03 54.7
32 TraesCS4D01G271900 chr1A 79.893 373 40 18 843 1200 569356152 569355800 1.030000e-59 241.0
33 TraesCS4D01G271900 chr1B 91.765 170 13 1 2204 2372 322488007 322488176 4.810000e-58 235.0
34 TraesCS4D01G271900 chr2A 91.228 171 15 0 2203 2373 680277628 680277458 1.730000e-57 233.0
35 TraesCS4D01G271900 chr2A 90.000 90 9 0 1 90 520296445 520296534 1.820000e-22 117.0
36 TraesCS4D01G271900 chr2A 87.778 90 11 0 1 90 117735475 117735386 3.940000e-19 106.0
37 TraesCS4D01G271900 chr3D 90.698 172 10 6 2200 2369 374360470 374360303 1.040000e-54 224.0
38 TraesCS4D01G271900 chr3D 90.476 168 15 1 2203 2369 597295667 597295500 1.350000e-53 220.0
39 TraesCS4D01G271900 chr5B 89.571 163 16 1 2204 2365 83902775 83902613 3.770000e-49 206.0
40 TraesCS4D01G271900 chr5B 91.111 90 8 0 1 90 271101737 271101648 3.910000e-24 122.0
41 TraesCS4D01G271900 chr7D 88.095 168 19 1 2204 2371 84341855 84341689 6.310000e-47 198.0
42 TraesCS4D01G271900 chr7D 90.909 88 8 0 1 88 219883171 219883084 5.060000e-23 119.0
43 TraesCS4D01G271900 chr2B 89.773 88 7 2 1 88 110688658 110688573 8.460000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G271900 chr4D 442395073 442397961 2888 False 5336.00 5336 100.000000 1 2889 1 chr4D.!!$F2 2888
1 TraesCS4D01G271900 chr4D 441255406 441256780 1374 False 1031.00 1031 80.862000 522 1889 1 chr4D.!!$F1 1367
2 TraesCS4D01G271900 chr4D 442214329 442224024 9695 True 697.10 2132 90.134714 103 2856 7 chr4D.!!$R2 2753
3 TraesCS4D01G271900 chr4D 442246722 442249564 2842 True 650.25 1986 88.620750 208 2849 4 chr4D.!!$R3 2641
4 TraesCS4D01G271900 chr4B 550501905 550503926 2021 False 2900.00 2900 92.578000 86 2115 1 chr4B.!!$F1 2029
5 TraesCS4D01G271900 chr4B 550432059 550433451 1392 True 1670.00 1670 88.472000 639 2031 1 chr4B.!!$R1 1392
6 TraesCS4D01G271900 chr4B 550486037 550489237 3200 True 579.60 1415 89.514200 208 2856 5 chr4B.!!$R3 2648
7 TraesCS4D01G271900 chr4A 24935155 24936591 1436 False 1892.00 1892 90.473000 583 2028 1 chr4A.!!$F2 1445
8 TraesCS4D01G271900 chr4A 24918250 24920351 2101 True 1228.50 2331 91.161000 214 2206 2 chr4A.!!$R3 1992
9 TraesCS4D01G271900 chr4A 26323351 26324771 1420 True 1051.00 1051 80.687000 487 1889 1 chr4A.!!$R1 1402
10 TraesCS4D01G271900 chr5D 544798728 544799996 1268 False 989.00 989 81.390000 642 1889 1 chr5D.!!$F1 1247

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
565 943 0.954452 AAAGGCCTCTTGCAGAAACG 59.046 50.0 5.23 0.0 43.89 3.60 F
1182 2200 0.101219 GCTCCGGCACCATGAATTTC 59.899 55.0 0.00 0.0 38.54 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1426 2656 0.108585 GAGGACAGAAGTTGGTGGCA 59.891 55.0 0.0 0.0 0.0 4.92 R
2335 5089 0.417841 TGCTCCTTCTTACCTCCCCT 59.582 55.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.399204 CTTTCTTCATTAATTGCTTGCCAC 57.601 37.500 0.00 0.00 0.00 5.01
24 25 5.465532 TTCTTCATTAATTGCTTGCCACA 57.534 34.783 0.00 0.00 0.00 4.17
25 26 5.664294 TCTTCATTAATTGCTTGCCACAT 57.336 34.783 0.00 0.00 0.00 3.21
26 27 6.040209 TCTTCATTAATTGCTTGCCACATT 57.960 33.333 0.00 0.00 0.00 2.71
27 28 7.167924 TCTTCATTAATTGCTTGCCACATTA 57.832 32.000 0.00 0.00 0.00 1.90
28 29 7.784037 TCTTCATTAATTGCTTGCCACATTAT 58.216 30.769 0.00 0.00 0.00 1.28
29 30 7.922278 TCTTCATTAATTGCTTGCCACATTATC 59.078 33.333 0.00 0.00 0.00 1.75
30 31 7.350744 TCATTAATTGCTTGCCACATTATCT 57.649 32.000 0.00 0.00 0.00 1.98
31 32 8.462589 TCATTAATTGCTTGCCACATTATCTA 57.537 30.769 0.00 0.00 0.00 1.98
32 33 9.081204 TCATTAATTGCTTGCCACATTATCTAT 57.919 29.630 0.00 0.00 0.00 1.98
33 34 9.701098 CATTAATTGCTTGCCACATTATCTATT 57.299 29.630 0.00 0.00 0.00 1.73
36 37 8.428186 AATTGCTTGCCACATTATCTATTTTG 57.572 30.769 0.00 0.00 0.00 2.44
37 38 6.528537 TGCTTGCCACATTATCTATTTTGT 57.471 33.333 0.00 0.00 0.00 2.83
38 39 6.563422 TGCTTGCCACATTATCTATTTTGTC 58.437 36.000 0.00 0.00 0.00 3.18
39 40 6.377996 TGCTTGCCACATTATCTATTTTGTCT 59.622 34.615 0.00 0.00 0.00 3.41
40 41 6.694411 GCTTGCCACATTATCTATTTTGTCTG 59.306 38.462 0.00 0.00 0.00 3.51
41 42 6.698008 TGCCACATTATCTATTTTGTCTGG 57.302 37.500 0.00 0.00 0.00 3.86
42 43 6.422333 TGCCACATTATCTATTTTGTCTGGA 58.578 36.000 0.00 0.00 0.00 3.86
43 44 7.062322 TGCCACATTATCTATTTTGTCTGGAT 58.938 34.615 0.00 0.00 0.00 3.41
44 45 8.217111 TGCCACATTATCTATTTTGTCTGGATA 58.783 33.333 0.00 0.00 0.00 2.59
45 46 9.236006 GCCACATTATCTATTTTGTCTGGATAT 57.764 33.333 0.00 0.00 0.00 1.63
54 55 9.685276 TCTATTTTGTCTGGATATTTGTGATGT 57.315 29.630 0.00 0.00 0.00 3.06
58 59 7.624360 TTGTCTGGATATTTGTGATGTTACC 57.376 36.000 0.00 0.00 0.00 2.85
59 60 6.716284 TGTCTGGATATTTGTGATGTTACCA 58.284 36.000 0.00 0.00 0.00 3.25
60 61 7.345691 TGTCTGGATATTTGTGATGTTACCAT 58.654 34.615 0.00 0.00 0.00 3.55
61 62 7.498900 TGTCTGGATATTTGTGATGTTACCATC 59.501 37.037 0.00 0.00 46.41 3.51
62 63 7.716998 GTCTGGATATTTGTGATGTTACCATCT 59.283 37.037 1.69 0.00 46.38 2.90
63 64 8.933653 TCTGGATATTTGTGATGTTACCATCTA 58.066 33.333 1.69 0.00 46.38 1.98
64 65 9.730705 CTGGATATTTGTGATGTTACCATCTAT 57.269 33.333 1.69 0.00 46.38 1.98
65 66 9.506018 TGGATATTTGTGATGTTACCATCTATG 57.494 33.333 1.69 0.00 46.38 2.23
66 67 9.507329 GGATATTTGTGATGTTACCATCTATGT 57.493 33.333 1.69 0.00 46.38 2.29
70 71 9.905713 ATTTGTGATGTTACCATCTATGTTACT 57.094 29.630 1.69 0.00 46.38 2.24
71 72 8.942338 TTGTGATGTTACCATCTATGTTACTC 57.058 34.615 1.69 0.00 46.38 2.59
72 73 7.497595 TGTGATGTTACCATCTATGTTACTCC 58.502 38.462 1.69 0.00 46.38 3.85
73 74 7.344612 TGTGATGTTACCATCTATGTTACTCCT 59.655 37.037 1.69 0.00 46.38 3.69
74 75 8.857098 GTGATGTTACCATCTATGTTACTCCTA 58.143 37.037 1.69 0.00 46.38 2.94
75 76 8.857098 TGATGTTACCATCTATGTTACTCCTAC 58.143 37.037 1.69 0.00 46.38 3.18
76 77 9.080097 GATGTTACCATCTATGTTACTCCTACT 57.920 37.037 0.00 0.00 43.49 2.57
77 78 8.234136 TGTTACCATCTATGTTACTCCTACTG 57.766 38.462 0.00 0.00 0.00 2.74
78 79 7.837689 TGTTACCATCTATGTTACTCCTACTGT 59.162 37.037 0.00 0.00 0.00 3.55
79 80 6.716934 ACCATCTATGTTACTCCTACTGTG 57.283 41.667 0.00 0.00 0.00 3.66
80 81 5.598830 ACCATCTATGTTACTCCTACTGTGG 59.401 44.000 0.00 0.00 0.00 4.17
81 82 5.833667 CCATCTATGTTACTCCTACTGTGGA 59.166 44.000 0.00 0.00 34.52 4.02
82 83 6.495181 CCATCTATGTTACTCCTACTGTGGAT 59.505 42.308 0.00 0.00 35.30 3.41
83 84 7.670140 CCATCTATGTTACTCCTACTGTGGATA 59.330 40.741 0.00 0.00 35.30 2.59
84 85 8.735315 CATCTATGTTACTCCTACTGTGGATAG 58.265 40.741 0.00 0.00 35.30 2.08
101 102 5.763698 GTGGATAGTCTAAACCAATTAGGCC 59.236 44.000 0.00 0.00 45.56 5.19
104 105 1.674441 GTCTAAACCAATTAGGCCGGC 59.326 52.381 21.18 21.18 39.80 6.13
132 133 6.819649 CCAAGTAATAATCAAGGTCGGTGTAA 59.180 38.462 0.00 0.00 0.00 2.41
133 134 7.497909 CCAAGTAATAATCAAGGTCGGTGTAAT 59.502 37.037 0.00 0.00 0.00 1.89
144 145 3.621715 GGTCGGTGTAATCATTTGACCTC 59.378 47.826 1.42 0.00 38.13 3.85
264 526 7.116519 CAGTTAGAGACAGTTTTAGTTAGTGGC 59.883 40.741 0.00 0.00 0.00 5.01
280 542 2.109181 GCGGCTAGCGGGAATTCT 59.891 61.111 22.16 0.00 35.41 2.40
380 683 2.428171 TGTACGGCCTGAATGTAGGTAC 59.572 50.000 0.00 2.93 40.11 3.34
430 745 3.128589 TCTGGTGCGAAATGCCTTTAATC 59.871 43.478 0.00 0.00 45.60 1.75
507 880 5.535753 AGCCAAGCAGAAAACATAAAACT 57.464 34.783 0.00 0.00 0.00 2.66
508 881 5.532557 AGCCAAGCAGAAAACATAAAACTC 58.467 37.500 0.00 0.00 0.00 3.01
565 943 0.954452 AAAGGCCTCTTGCAGAAACG 59.046 50.000 5.23 0.00 43.89 3.60
935 1931 3.740832 CGATCGCCACAATATCTAGCAAA 59.259 43.478 0.26 0.00 0.00 3.68
955 1951 2.567985 ACTAGCTAGCTCCGAGAGAAC 58.432 52.381 23.26 0.00 0.00 3.01
1056 2067 0.162507 CAGTTCTCGCGTTCTGCTTG 59.837 55.000 5.77 0.00 43.27 4.01
1182 2200 0.101219 GCTCCGGCACCATGAATTTC 59.899 55.000 0.00 0.00 38.54 2.17
1207 2425 6.071221 CCCCAATATTACTTGTATGCATGCAT 60.071 38.462 33.92 33.92 40.19 3.96
1208 2426 7.122501 CCCCAATATTACTTGTATGCATGCATA 59.877 37.037 31.75 31.75 37.82 3.14
1303 2533 2.269883 GTTGCGGGGTACGGGATT 59.730 61.111 0.00 0.00 44.51 3.01
1390 2620 1.186200 TCTGCGATACCAGCAAGTCT 58.814 50.000 0.00 0.00 44.67 3.24
1426 2656 0.391661 GCACATCCATCACCGTGTCT 60.392 55.000 0.00 0.00 0.00 3.41
1820 3050 1.139095 GGCCAGTACCTCGTCTTCG 59.861 63.158 0.00 0.00 38.55 3.79
1979 4726 5.123344 AGGTGTCGCTGTAAATGTAATTTCC 59.877 40.000 0.00 0.00 44.81 3.13
2013 4760 7.301054 ACAGATGATTGTTTCTTTGATTCGTC 58.699 34.615 0.00 0.00 0.00 4.20
2052 4800 0.992072 CAGTCGAGTGGCAATACACG 59.008 55.000 12.66 0.00 45.80 4.49
2092 4840 5.938322 ACTGTAAAAATATGCAACTCCACG 58.062 37.500 0.00 0.00 0.00 4.94
2164 4918 1.202879 TCAAGTGTTTTCCAGCGGGAT 60.203 47.619 6.36 0.00 44.48 3.85
2182 4936 5.394802 CGGGATATCGACAAATAGAGTCTG 58.605 45.833 1.86 0.00 33.89 3.51
2183 4937 5.164954 GGGATATCGACAAATAGAGTCTGC 58.835 45.833 1.86 0.00 33.89 4.26
2185 4939 2.561733 TCGACAAATAGAGTCTGCGG 57.438 50.000 1.86 0.00 33.89 5.69
2192 4946 0.748367 ATAGAGTCTGCGGCGAGTGA 60.748 55.000 12.98 1.28 0.00 3.41
2194 4948 1.153745 GAGTCTGCGGCGAGTGATT 60.154 57.895 12.98 1.03 0.00 2.57
2195 4949 0.737715 GAGTCTGCGGCGAGTGATTT 60.738 55.000 12.98 0.00 0.00 2.17
2196 4950 0.737715 AGTCTGCGGCGAGTGATTTC 60.738 55.000 12.98 0.00 0.00 2.17
2197 4951 0.737715 GTCTGCGGCGAGTGATTTCT 60.738 55.000 12.98 0.00 0.00 2.52
2198 4952 0.737367 TCTGCGGCGAGTGATTTCTG 60.737 55.000 12.98 0.00 0.00 3.02
2199 4953 0.737367 CTGCGGCGAGTGATTTCTGA 60.737 55.000 12.98 0.00 0.00 3.27
2200 4954 0.320334 TGCGGCGAGTGATTTCTGAA 60.320 50.000 12.98 0.00 0.00 3.02
2201 4955 0.796312 GCGGCGAGTGATTTCTGAAA 59.204 50.000 12.98 5.15 0.00 2.69
2202 4956 1.398390 GCGGCGAGTGATTTCTGAAAT 59.602 47.619 12.98 15.09 0.00 2.17
2203 4957 2.789092 GCGGCGAGTGATTTCTGAAATG 60.789 50.000 19.59 6.69 0.00 2.32
2204 4958 2.672874 CGGCGAGTGATTTCTGAAATGA 59.327 45.455 19.59 9.24 0.00 2.57
2205 4959 3.242220 CGGCGAGTGATTTCTGAAATGAG 60.242 47.826 19.59 7.65 0.00 2.90
2206 4960 3.486542 GGCGAGTGATTTCTGAAATGAGC 60.487 47.826 19.59 15.15 0.00 4.26
2207 4961 3.125829 GCGAGTGATTTCTGAAATGAGCA 59.874 43.478 19.59 9.23 0.00 4.26
2208 4962 4.378770 GCGAGTGATTTCTGAAATGAGCAA 60.379 41.667 19.59 0.00 0.00 3.91
2209 4963 5.675575 GCGAGTGATTTCTGAAATGAGCAAT 60.676 40.000 19.59 10.88 0.00 3.56
2210 4964 6.320171 CGAGTGATTTCTGAAATGAGCAATT 58.680 36.000 19.59 4.80 0.00 2.32
2211 4965 6.805271 CGAGTGATTTCTGAAATGAGCAATTT 59.195 34.615 19.59 2.71 41.33 1.82
2212 4966 7.327761 CGAGTGATTTCTGAAATGAGCAATTTT 59.672 33.333 19.59 0.00 38.64 1.82
2213 4967 9.630098 GAGTGATTTCTGAAATGAGCAATTTTA 57.370 29.630 19.59 0.00 38.64 1.52
2214 4968 9.985730 AGTGATTTCTGAAATGAGCAATTTTAA 57.014 25.926 19.59 0.00 38.64 1.52
2216 4970 9.761504 TGATTTCTGAAATGAGCAATTTTAACA 57.238 25.926 19.59 4.62 38.64 2.41
2219 4973 7.585286 TCTGAAATGAGCAATTTTAACATGC 57.415 32.000 0.00 0.00 38.64 4.06
2225 4979 4.725790 AGCAATTTTAACATGCTCCCTC 57.274 40.909 0.00 0.00 46.98 4.30
2226 4980 4.347607 AGCAATTTTAACATGCTCCCTCT 58.652 39.130 0.00 0.00 46.98 3.69
2227 4981 4.774200 AGCAATTTTAACATGCTCCCTCTT 59.226 37.500 0.00 0.00 46.98 2.85
2228 4982 5.951747 AGCAATTTTAACATGCTCCCTCTTA 59.048 36.000 0.00 0.00 46.98 2.10
2229 4983 6.036470 GCAATTTTAACATGCTCCCTCTTAC 58.964 40.000 0.00 0.00 37.12 2.34
2230 4984 6.564328 CAATTTTAACATGCTCCCTCTTACC 58.436 40.000 0.00 0.00 0.00 2.85
2231 4985 5.514500 TTTTAACATGCTCCCTCTTACCT 57.486 39.130 0.00 0.00 0.00 3.08
2232 4986 4.755266 TTAACATGCTCCCTCTTACCTC 57.245 45.455 0.00 0.00 0.00 3.85
2233 4987 1.501582 ACATGCTCCCTCTTACCTCC 58.498 55.000 0.00 0.00 0.00 4.30
2234 4988 1.008938 ACATGCTCCCTCTTACCTCCT 59.991 52.381 0.00 0.00 0.00 3.69
2235 4989 1.691434 CATGCTCCCTCTTACCTCCTC 59.309 57.143 0.00 0.00 0.00 3.71
2236 4990 1.011595 TGCTCCCTCTTACCTCCTCT 58.988 55.000 0.00 0.00 0.00 3.69
2237 4991 1.362932 TGCTCCCTCTTACCTCCTCTT 59.637 52.381 0.00 0.00 0.00 2.85
2238 4992 2.225650 TGCTCCCTCTTACCTCCTCTTT 60.226 50.000 0.00 0.00 0.00 2.52
2239 4993 2.841266 GCTCCCTCTTACCTCCTCTTTT 59.159 50.000 0.00 0.00 0.00 2.27
2240 4994 3.118555 GCTCCCTCTTACCTCCTCTTTTC 60.119 52.174 0.00 0.00 0.00 2.29
2241 4995 3.097614 TCCCTCTTACCTCCTCTTTTCG 58.902 50.000 0.00 0.00 0.00 3.46
2242 4996 2.418884 CCCTCTTACCTCCTCTTTTCGC 60.419 54.545 0.00 0.00 0.00 4.70
2243 4997 2.233922 CCTCTTACCTCCTCTTTTCGCA 59.766 50.000 0.00 0.00 0.00 5.10
2244 4998 3.118592 CCTCTTACCTCCTCTTTTCGCAT 60.119 47.826 0.00 0.00 0.00 4.73
2245 4999 3.861840 TCTTACCTCCTCTTTTCGCATG 58.138 45.455 0.00 0.00 0.00 4.06
2246 5000 3.513912 TCTTACCTCCTCTTTTCGCATGA 59.486 43.478 0.00 0.00 0.00 3.07
2247 5001 2.393271 ACCTCCTCTTTTCGCATGAG 57.607 50.000 0.00 0.00 0.00 2.90
2248 5002 1.902508 ACCTCCTCTTTTCGCATGAGA 59.097 47.619 0.00 0.00 0.00 3.27
2249 5003 2.093764 ACCTCCTCTTTTCGCATGAGAG 60.094 50.000 0.00 0.00 37.30 3.20
2255 5009 4.748892 CTCTTTTCGCATGAGAGGTAAGA 58.251 43.478 14.94 14.94 34.63 2.10
2256 5010 5.147330 TCTTTTCGCATGAGAGGTAAGAA 57.853 39.130 14.01 0.00 0.00 2.52
2257 5011 5.171476 TCTTTTCGCATGAGAGGTAAGAAG 58.829 41.667 14.01 7.71 0.00 2.85
2258 5012 3.526931 TTCGCATGAGAGGTAAGAAGG 57.473 47.619 0.00 0.00 0.00 3.46
2259 5013 2.457598 TCGCATGAGAGGTAAGAAGGT 58.542 47.619 0.00 0.00 0.00 3.50
2260 5014 3.628008 TCGCATGAGAGGTAAGAAGGTA 58.372 45.455 0.00 0.00 0.00 3.08
2261 5015 4.021229 TCGCATGAGAGGTAAGAAGGTAA 58.979 43.478 0.00 0.00 0.00 2.85
2262 5016 4.098044 TCGCATGAGAGGTAAGAAGGTAAG 59.902 45.833 0.00 0.00 0.00 2.34
2263 5017 4.098044 CGCATGAGAGGTAAGAAGGTAAGA 59.902 45.833 0.00 0.00 0.00 2.10
2264 5018 5.596845 GCATGAGAGGTAAGAAGGTAAGAG 58.403 45.833 0.00 0.00 0.00 2.85
2265 5019 5.128008 GCATGAGAGGTAAGAAGGTAAGAGT 59.872 44.000 0.00 0.00 0.00 3.24
2266 5020 6.351456 GCATGAGAGGTAAGAAGGTAAGAGTT 60.351 42.308 0.00 0.00 0.00 3.01
2267 5021 7.147880 GCATGAGAGGTAAGAAGGTAAGAGTTA 60.148 40.741 0.00 0.00 0.00 2.24
2268 5022 8.750298 CATGAGAGGTAAGAAGGTAAGAGTTAA 58.250 37.037 0.00 0.00 0.00 2.01
2269 5023 8.896722 TGAGAGGTAAGAAGGTAAGAGTTAAT 57.103 34.615 0.00 0.00 0.00 1.40
2270 5024 8.968969 TGAGAGGTAAGAAGGTAAGAGTTAATC 58.031 37.037 0.00 0.00 0.00 1.75
2271 5025 8.896722 AGAGGTAAGAAGGTAAGAGTTAATCA 57.103 34.615 0.00 0.00 0.00 2.57
2272 5026 9.322769 AGAGGTAAGAAGGTAAGAGTTAATCAA 57.677 33.333 0.00 0.00 0.00 2.57
2273 5027 9.939802 GAGGTAAGAAGGTAAGAGTTAATCAAA 57.060 33.333 0.00 0.00 0.00 2.69
2274 5028 9.722184 AGGTAAGAAGGTAAGAGTTAATCAAAC 57.278 33.333 0.00 0.00 38.46 2.93
2275 5029 8.944029 GGTAAGAAGGTAAGAGTTAATCAAACC 58.056 37.037 0.00 0.00 39.03 3.27
2276 5030 7.997773 AAGAAGGTAAGAGTTAATCAAACCC 57.002 36.000 0.94 0.00 39.03 4.11
2277 5031 7.086685 AGAAGGTAAGAGTTAATCAAACCCA 57.913 36.000 0.94 0.00 39.03 4.51
2278 5032 6.940867 AGAAGGTAAGAGTTAATCAAACCCAC 59.059 38.462 0.94 0.00 39.03 4.61
2279 5033 6.449830 AGGTAAGAGTTAATCAAACCCACT 57.550 37.500 0.94 0.00 39.03 4.00
2280 5034 7.563724 AGGTAAGAGTTAATCAAACCCACTA 57.436 36.000 0.94 0.00 39.03 2.74
2281 5035 7.392418 AGGTAAGAGTTAATCAAACCCACTAC 58.608 38.462 0.94 0.00 39.03 2.73
2282 5036 7.237055 AGGTAAGAGTTAATCAAACCCACTACT 59.763 37.037 0.94 0.00 39.03 2.57
2283 5037 7.881751 GGTAAGAGTTAATCAAACCCACTACTT 59.118 37.037 0.00 0.00 39.03 2.24
2284 5038 9.933723 GTAAGAGTTAATCAAACCCACTACTTA 57.066 33.333 0.00 0.00 39.03 2.24
2287 5041 9.449719 AGAGTTAATCAAACCCACTACTTAATG 57.550 33.333 0.00 0.00 39.03 1.90
2288 5042 8.051901 AGTTAATCAAACCCACTACTTAATGC 57.948 34.615 0.00 0.00 39.03 3.56
2289 5043 7.668052 AGTTAATCAAACCCACTACTTAATGCA 59.332 33.333 0.00 0.00 39.03 3.96
2290 5044 6.909550 AATCAAACCCACTACTTAATGCAA 57.090 33.333 0.00 0.00 0.00 4.08
2291 5045 7.480760 AATCAAACCCACTACTTAATGCAAT 57.519 32.000 0.00 0.00 0.00 3.56
2292 5046 6.509418 TCAAACCCACTACTTAATGCAATC 57.491 37.500 0.00 0.00 0.00 2.67
2293 5047 6.245408 TCAAACCCACTACTTAATGCAATCT 58.755 36.000 0.00 0.00 0.00 2.40
2294 5048 7.398829 TCAAACCCACTACTTAATGCAATCTA 58.601 34.615 0.00 0.00 0.00 1.98
2295 5049 7.335924 TCAAACCCACTACTTAATGCAATCTAC 59.664 37.037 0.00 0.00 0.00 2.59
2296 5050 5.357257 ACCCACTACTTAATGCAATCTACG 58.643 41.667 0.00 0.00 0.00 3.51
2297 5051 4.750098 CCCACTACTTAATGCAATCTACGG 59.250 45.833 0.00 0.00 0.00 4.02
2298 5052 4.211374 CCACTACTTAATGCAATCTACGGC 59.789 45.833 0.00 0.00 0.00 5.68
2299 5053 5.050490 CACTACTTAATGCAATCTACGGCT 58.950 41.667 0.00 0.00 0.00 5.52
2300 5054 5.523916 CACTACTTAATGCAATCTACGGCTT 59.476 40.000 0.00 0.00 0.00 4.35
2301 5055 6.700081 CACTACTTAATGCAATCTACGGCTTA 59.300 38.462 0.00 0.00 0.00 3.09
2302 5056 6.924060 ACTACTTAATGCAATCTACGGCTTAG 59.076 38.462 0.00 0.00 0.00 2.18
2303 5057 5.914033 ACTTAATGCAATCTACGGCTTAGA 58.086 37.500 2.96 2.96 41.29 2.10
2305 5059 6.647067 ACTTAATGCAATCTACGGCTTAGATC 59.353 38.462 13.23 3.87 45.47 2.75
2306 5060 4.881019 ATGCAATCTACGGCTTAGATCT 57.119 40.909 13.23 0.00 45.47 2.75
2307 5061 5.984695 ATGCAATCTACGGCTTAGATCTA 57.015 39.130 13.23 0.00 45.47 1.98
2308 5062 5.984695 TGCAATCTACGGCTTAGATCTAT 57.015 39.130 13.23 0.00 45.47 1.98
2309 5063 6.346477 TGCAATCTACGGCTTAGATCTATT 57.654 37.500 13.23 0.00 45.47 1.73
2310 5064 6.759272 TGCAATCTACGGCTTAGATCTATTT 58.241 36.000 13.23 0.00 45.47 1.40
2311 5065 6.646653 TGCAATCTACGGCTTAGATCTATTTG 59.353 38.462 13.23 9.65 45.47 2.32
2312 5066 6.868864 GCAATCTACGGCTTAGATCTATTTGA 59.131 38.462 13.23 0.00 45.47 2.69
2313 5067 7.547370 GCAATCTACGGCTTAGATCTATTTGAT 59.453 37.037 13.23 0.00 45.47 2.57
2316 5070 8.865420 TCTACGGCTTAGATCTATTTGATACT 57.135 34.615 2.58 0.00 35.14 2.12
2317 5071 8.948145 TCTACGGCTTAGATCTATTTGATACTC 58.052 37.037 2.58 0.00 35.14 2.59
2318 5072 7.768807 ACGGCTTAGATCTATTTGATACTCT 57.231 36.000 2.58 0.00 35.14 3.24
2319 5073 8.184304 ACGGCTTAGATCTATTTGATACTCTT 57.816 34.615 2.58 0.00 35.14 2.85
2320 5074 9.298250 ACGGCTTAGATCTATTTGATACTCTTA 57.702 33.333 2.58 0.00 35.14 2.10
2337 5091 9.474920 GATACTCTTATCTCTCATGTGAAAAGG 57.525 37.037 0.00 1.93 32.57 3.11
2338 5092 6.648192 ACTCTTATCTCTCATGTGAAAAGGG 58.352 40.000 10.34 10.34 0.00 3.95
2339 5093 5.994250 TCTTATCTCTCATGTGAAAAGGGG 58.006 41.667 0.00 0.00 0.00 4.79
2340 5094 5.726308 TCTTATCTCTCATGTGAAAAGGGGA 59.274 40.000 0.00 0.00 0.00 4.81
2341 5095 3.988976 TCTCTCATGTGAAAAGGGGAG 57.011 47.619 0.00 0.00 0.00 4.30
2342 5096 2.573462 TCTCTCATGTGAAAAGGGGAGG 59.427 50.000 0.00 0.00 0.00 4.30
2343 5097 2.307098 CTCTCATGTGAAAAGGGGAGGT 59.693 50.000 0.00 0.00 0.00 3.85
2344 5098 3.519510 CTCTCATGTGAAAAGGGGAGGTA 59.480 47.826 0.00 0.00 0.00 3.08
2345 5099 3.913799 TCTCATGTGAAAAGGGGAGGTAA 59.086 43.478 0.00 0.00 0.00 2.85
2346 5100 4.019321 TCTCATGTGAAAAGGGGAGGTAAG 60.019 45.833 0.00 0.00 0.00 2.34
2347 5101 3.913799 TCATGTGAAAAGGGGAGGTAAGA 59.086 43.478 0.00 0.00 0.00 2.10
2348 5102 4.352595 TCATGTGAAAAGGGGAGGTAAGAA 59.647 41.667 0.00 0.00 0.00 2.52
2349 5103 4.367039 TGTGAAAAGGGGAGGTAAGAAG 57.633 45.455 0.00 0.00 0.00 2.85
2350 5104 3.073946 TGTGAAAAGGGGAGGTAAGAAGG 59.926 47.826 0.00 0.00 0.00 3.46
2351 5105 3.329814 GTGAAAAGGGGAGGTAAGAAGGA 59.670 47.826 0.00 0.00 0.00 3.36
2352 5106 3.587506 TGAAAAGGGGAGGTAAGAAGGAG 59.412 47.826 0.00 0.00 0.00 3.69
2353 5107 1.585895 AAGGGGAGGTAAGAAGGAGC 58.414 55.000 0.00 0.00 0.00 4.70
2354 5108 0.417841 AGGGGAGGTAAGAAGGAGCA 59.582 55.000 0.00 0.00 0.00 4.26
2355 5109 1.010170 AGGGGAGGTAAGAAGGAGCAT 59.990 52.381 0.00 0.00 0.00 3.79
2356 5110 1.141858 GGGGAGGTAAGAAGGAGCATG 59.858 57.143 0.00 0.00 0.00 4.06
2357 5111 1.840635 GGGAGGTAAGAAGGAGCATGT 59.159 52.381 0.00 0.00 0.00 3.21
2358 5112 2.239907 GGGAGGTAAGAAGGAGCATGTT 59.760 50.000 0.00 0.00 0.00 2.71
2359 5113 3.454812 GGGAGGTAAGAAGGAGCATGTTA 59.545 47.826 0.00 0.00 0.00 2.41
2360 5114 4.080526 GGGAGGTAAGAAGGAGCATGTTAA 60.081 45.833 0.00 0.00 0.00 2.01
2361 5115 5.497474 GGAGGTAAGAAGGAGCATGTTAAA 58.503 41.667 0.00 0.00 0.00 1.52
2362 5116 5.944007 GGAGGTAAGAAGGAGCATGTTAAAA 59.056 40.000 0.00 0.00 0.00 1.52
2363 5117 6.433093 GGAGGTAAGAAGGAGCATGTTAAAAA 59.567 38.462 0.00 0.00 0.00 1.94
2406 5160 4.248058 GGCAAAAATCTAAGCAACTGCAT 58.752 39.130 4.22 0.00 45.16 3.96
2423 5177 7.869937 GCAACTGCATAGAATTCAGAGATAGTA 59.130 37.037 8.44 0.00 41.59 1.82
2465 5220 2.092323 GAACCTGTAACATCCTTGGCC 58.908 52.381 0.00 0.00 0.00 5.36
2471 5226 0.254462 TAACATCCTTGGCCGCATGA 59.746 50.000 0.00 0.00 0.00 3.07
2501 5673 2.858745 TGTAGACCAAAACAAGGGAGC 58.141 47.619 0.00 0.00 0.00 4.70
2505 5677 3.374764 AGACCAAAACAAGGGAGCTTTT 58.625 40.909 0.00 0.00 0.00 2.27
2508 5680 2.212652 CAAAACAAGGGAGCTTTTGGC 58.787 47.619 10.17 0.00 42.19 4.52
2510 5682 0.752658 AACAAGGGAGCTTTTGGCAC 59.247 50.000 10.17 0.00 44.79 5.01
2639 5811 4.285260 TCATGATAGAGTGCCACATGCTAT 59.715 41.667 0.00 1.19 42.00 2.97
2706 5878 5.622346 TTTGACAAGTTTAGGGCCATTTT 57.378 34.783 6.18 0.00 0.00 1.82
2735 5907 2.715763 AGTCAACCAAGGGGACTCTA 57.284 50.000 9.14 0.00 42.68 2.43
2857 6061 9.801873 TTTTATACAATCCTTCAATTTAGCTGC 57.198 29.630 0.00 0.00 0.00 5.25
2858 6062 8.518430 TTATACAATCCTTCAATTTAGCTGCA 57.482 30.769 1.02 0.00 0.00 4.41
2859 6063 5.726980 ACAATCCTTCAATTTAGCTGCAA 57.273 34.783 1.02 0.00 0.00 4.08
2862 6066 7.839907 ACAATCCTTCAATTTAGCTGCAATTA 58.160 30.769 1.02 0.00 0.00 1.40
2863 6067 8.480501 ACAATCCTTCAATTTAGCTGCAATTAT 58.519 29.630 1.02 0.00 0.00 1.28
2864 6068 8.761497 CAATCCTTCAATTTAGCTGCAATTATG 58.239 33.333 1.02 0.00 0.00 1.90
2865 6069 7.408756 TCCTTCAATTTAGCTGCAATTATGT 57.591 32.000 1.02 0.00 0.00 2.29
2868 6072 8.408601 CCTTCAATTTAGCTGCAATTATGTAGT 58.591 33.333 1.02 0.00 40.94 2.73
2870 6074 7.630026 TCAATTTAGCTGCAATTATGTAGTCG 58.370 34.615 1.02 0.00 40.94 4.18
2871 6075 7.494298 TCAATTTAGCTGCAATTATGTAGTCGA 59.506 33.333 1.02 0.00 40.94 4.20
2872 6076 6.828502 TTTAGCTGCAATTATGTAGTCGAG 57.171 37.500 1.02 0.00 40.94 4.04
2873 6077 4.655762 AGCTGCAATTATGTAGTCGAGA 57.344 40.909 1.02 0.00 40.94 4.04
2874 6078 4.615949 AGCTGCAATTATGTAGTCGAGAG 58.384 43.478 1.02 0.00 40.94 3.20
2875 6079 4.098654 AGCTGCAATTATGTAGTCGAGAGT 59.901 41.667 1.02 0.00 40.94 3.24
2877 6081 5.576447 TGCAATTATGTAGTCGAGAGTGA 57.424 39.130 0.00 0.00 0.00 3.41
2879 6083 6.036470 TGCAATTATGTAGTCGAGAGTGAAG 58.964 40.000 0.00 0.00 0.00 3.02
2880 6084 6.127730 TGCAATTATGTAGTCGAGAGTGAAGA 60.128 38.462 0.00 0.00 0.00 2.87
2881 6085 6.416455 GCAATTATGTAGTCGAGAGTGAAGAG 59.584 42.308 0.00 0.00 0.00 2.85
2882 6086 7.679875 GCAATTATGTAGTCGAGAGTGAAGAGA 60.680 40.741 0.00 0.00 0.00 3.10
2883 6087 8.349245 CAATTATGTAGTCGAGAGTGAAGAGAT 58.651 37.037 0.00 0.00 0.00 2.75
2885 6089 4.833390 TGTAGTCGAGAGTGAAGAGATGA 58.167 43.478 0.00 0.00 0.00 2.92
2887 6091 4.214986 AGTCGAGAGTGAAGAGATGAGA 57.785 45.455 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.927689 TGTGGCAAGCAATTAATGAAGAAAG 59.072 36.000 0.00 0.00 0.00 2.62
1 2 5.851720 TGTGGCAAGCAATTAATGAAGAAA 58.148 33.333 0.00 0.00 0.00 2.52
5 6 7.784037 AGATAATGTGGCAAGCAATTAATGAA 58.216 30.769 0.00 0.00 0.00 2.57
6 7 7.350744 AGATAATGTGGCAAGCAATTAATGA 57.649 32.000 0.00 0.00 0.00 2.57
7 8 9.701098 AATAGATAATGTGGCAAGCAATTAATG 57.299 29.630 0.00 0.00 0.00 1.90
10 11 9.531942 CAAAATAGATAATGTGGCAAGCAATTA 57.468 29.630 0.00 0.00 0.00 1.40
11 12 8.042515 ACAAAATAGATAATGTGGCAAGCAATT 58.957 29.630 0.00 0.00 0.00 2.32
12 13 7.558604 ACAAAATAGATAATGTGGCAAGCAAT 58.441 30.769 0.00 0.00 0.00 3.56
13 14 6.934056 ACAAAATAGATAATGTGGCAAGCAA 58.066 32.000 0.00 0.00 0.00 3.91
14 15 6.377996 AGACAAAATAGATAATGTGGCAAGCA 59.622 34.615 0.00 0.00 0.00 3.91
15 16 6.694411 CAGACAAAATAGATAATGTGGCAAGC 59.306 38.462 0.00 0.00 0.00 4.01
16 17 7.067372 TCCAGACAAAATAGATAATGTGGCAAG 59.933 37.037 0.00 0.00 0.00 4.01
17 18 6.889177 TCCAGACAAAATAGATAATGTGGCAA 59.111 34.615 0.00 0.00 0.00 4.52
18 19 6.422333 TCCAGACAAAATAGATAATGTGGCA 58.578 36.000 0.00 0.00 0.00 4.92
19 20 6.942532 TCCAGACAAAATAGATAATGTGGC 57.057 37.500 0.00 0.00 0.00 5.01
28 29 9.685276 ACATCACAAATATCCAGACAAAATAGA 57.315 29.630 0.00 0.00 0.00 1.98
32 33 8.519526 GGTAACATCACAAATATCCAGACAAAA 58.480 33.333 0.00 0.00 0.00 2.44
33 34 7.667635 TGGTAACATCACAAATATCCAGACAAA 59.332 33.333 0.00 0.00 46.17 2.83
34 35 7.171653 TGGTAACATCACAAATATCCAGACAA 58.828 34.615 0.00 0.00 46.17 3.18
35 36 6.716284 TGGTAACATCACAAATATCCAGACA 58.284 36.000 0.00 0.00 46.17 3.41
53 54 8.136165 CACAGTAGGAGTAACATAGATGGTAAC 58.864 40.741 0.00 0.00 30.66 2.50
54 55 7.287005 CCACAGTAGGAGTAACATAGATGGTAA 59.713 40.741 0.00 0.00 30.66 2.85
55 56 6.776116 CCACAGTAGGAGTAACATAGATGGTA 59.224 42.308 0.00 0.00 0.00 3.25
56 57 5.598830 CCACAGTAGGAGTAACATAGATGGT 59.401 44.000 0.00 0.00 0.00 3.55
57 58 5.833667 TCCACAGTAGGAGTAACATAGATGG 59.166 44.000 0.00 0.00 32.77 3.51
58 59 6.961360 TCCACAGTAGGAGTAACATAGATG 57.039 41.667 0.00 0.00 32.77 2.90
59 60 8.449625 ACTATCCACAGTAGGAGTAACATAGAT 58.550 37.037 0.00 0.00 41.90 1.98
60 61 7.813331 ACTATCCACAGTAGGAGTAACATAGA 58.187 38.462 0.00 0.00 41.90 1.98
61 62 7.940137 AGACTATCCACAGTAGGAGTAACATAG 59.060 40.741 0.00 0.00 41.90 2.23
62 63 7.813331 AGACTATCCACAGTAGGAGTAACATA 58.187 38.462 0.00 0.00 41.90 2.29
63 64 6.674573 AGACTATCCACAGTAGGAGTAACAT 58.325 40.000 0.00 0.00 41.90 2.71
64 65 6.075949 AGACTATCCACAGTAGGAGTAACA 57.924 41.667 0.00 0.00 41.90 2.41
65 66 8.404765 GTTTAGACTATCCACAGTAGGAGTAAC 58.595 40.741 0.00 0.00 41.90 2.50
66 67 7.559170 GGTTTAGACTATCCACAGTAGGAGTAA 59.441 40.741 0.00 0.00 41.90 2.24
67 68 7.059156 GGTTTAGACTATCCACAGTAGGAGTA 58.941 42.308 0.00 0.00 41.90 2.59
68 69 5.892686 GGTTTAGACTATCCACAGTAGGAGT 59.107 44.000 0.00 0.00 41.90 3.85
69 70 5.892119 TGGTTTAGACTATCCACAGTAGGAG 59.108 44.000 3.66 0.00 41.90 3.69
70 71 5.834460 TGGTTTAGACTATCCACAGTAGGA 58.166 41.667 3.66 0.00 43.01 2.94
71 72 6.540438 TTGGTTTAGACTATCCACAGTAGG 57.460 41.667 6.46 0.00 0.00 3.18
72 73 9.751542 CTAATTGGTTTAGACTATCCACAGTAG 57.248 37.037 6.46 7.41 39.86 2.57
73 74 8.701895 CCTAATTGGTTTAGACTATCCACAGTA 58.298 37.037 6.46 3.38 39.86 2.74
74 75 7.565680 CCTAATTGGTTTAGACTATCCACAGT 58.434 38.462 6.46 0.00 39.86 3.55
75 76 6.483640 GCCTAATTGGTTTAGACTATCCACAG 59.516 42.308 6.46 5.29 39.86 3.66
76 77 6.354130 GCCTAATTGGTTTAGACTATCCACA 58.646 40.000 6.46 1.44 39.86 4.17
77 78 5.763698 GGCCTAATTGGTTTAGACTATCCAC 59.236 44.000 0.00 0.00 39.86 4.02
78 79 5.454187 CGGCCTAATTGGTTTAGACTATCCA 60.454 44.000 0.00 3.66 39.86 3.41
79 80 4.995487 CGGCCTAATTGGTTTAGACTATCC 59.005 45.833 0.00 0.00 39.86 2.59
80 81 4.995487 CCGGCCTAATTGGTTTAGACTATC 59.005 45.833 0.00 0.00 39.86 2.08
81 82 4.745783 GCCGGCCTAATTGGTTTAGACTAT 60.746 45.833 18.11 0.00 39.86 2.12
82 83 3.432608 GCCGGCCTAATTGGTTTAGACTA 60.433 47.826 18.11 0.00 39.86 2.59
83 84 2.682858 GCCGGCCTAATTGGTTTAGACT 60.683 50.000 18.11 0.00 39.86 3.24
84 85 1.674441 GCCGGCCTAATTGGTTTAGAC 59.326 52.381 18.11 0.00 39.86 2.59
101 102 5.365619 ACCTTGATTATTACTTGGTAGCCG 58.634 41.667 0.00 0.00 0.00 5.52
104 105 6.479001 CACCGACCTTGATTATTACTTGGTAG 59.521 42.308 0.00 0.00 0.00 3.18
132 133 4.154918 GCTTCTTGTTCGAGGTCAAATGAT 59.845 41.667 0.00 0.00 0.00 2.45
133 134 3.498397 GCTTCTTGTTCGAGGTCAAATGA 59.502 43.478 0.00 0.00 0.00 2.57
144 145 3.312421 TCCTCTTGTTTGCTTCTTGTTCG 59.688 43.478 0.00 0.00 0.00 3.95
191 192 4.081406 TGCAGCAACCATTGAAGTAATCT 58.919 39.130 0.00 0.00 0.00 2.40
264 526 3.498676 CTAGAATTCCCGCTAGCCG 57.501 57.895 9.66 1.99 0.00 5.52
380 683 3.181467 TGCAACCATTCAGTTTTCTTGGG 60.181 43.478 0.00 0.00 31.55 4.12
430 745 0.914551 CGAGTAGATGCAACCGTTCG 59.085 55.000 0.00 0.00 0.00 3.95
507 880 0.667993 AAGGGTCGACGTACGTTTGA 59.332 50.000 23.70 19.85 43.13 2.69
508 881 1.490621 AAAGGGTCGACGTACGTTTG 58.509 50.000 23.70 17.84 43.13 2.93
565 943 1.623359 TTTGTTGAGTGCGCACAAAC 58.377 45.000 39.21 36.26 33.47 2.93
935 1931 2.567985 GTTCTCTCGGAGCTAGCTAGT 58.432 52.381 19.38 8.90 0.00 2.57
946 1942 3.636300 AGAGATGATTGAGGTTCTCTCGG 59.364 47.826 0.00 0.00 45.32 4.63
955 1951 6.465948 CAGAAATAGGGAGAGATGATTGAGG 58.534 44.000 0.00 0.00 0.00 3.86
987 1996 1.730501 CTGCCATCTTTCTGCTCGAA 58.269 50.000 0.00 0.00 0.00 3.71
1056 2067 3.059386 TTGGAATTGACCGGCGCC 61.059 61.111 19.07 19.07 0.00 6.53
1182 2200 5.243507 TGCATGCATACAAGTAATATTGGGG 59.756 40.000 18.46 0.00 34.36 4.96
1207 2425 1.958715 ACGCACACACGCATTGCTA 60.959 52.632 7.12 0.00 36.19 3.49
1208 2426 3.279116 ACGCACACACGCATTGCT 61.279 55.556 7.12 0.00 36.19 3.91
1303 2533 2.314647 GCTCAGCGCCACGTTGTTA 61.315 57.895 2.29 0.00 39.03 2.41
1390 2620 1.823470 GCCGGGCTTGCACATATCA 60.823 57.895 12.87 0.00 0.00 2.15
1426 2656 0.108585 GAGGACAGAAGTTGGTGGCA 59.891 55.000 0.00 0.00 0.00 4.92
1492 2722 1.667830 CATGTCGAAGTGGTGGCGT 60.668 57.895 0.00 0.00 0.00 5.68
1990 4737 7.678947 AGACGAATCAAAGAAACAATCATCT 57.321 32.000 0.00 0.00 0.00 2.90
1991 4738 8.017373 TCAAGACGAATCAAAGAAACAATCATC 58.983 33.333 0.00 0.00 0.00 2.92
2013 4760 6.088749 CGACTGAGACTGAACAGTTAATCAAG 59.911 42.308 8.87 9.63 45.54 3.02
2052 4800 8.658499 TTTTACAGTTTAGTCTTCACTCCTTC 57.342 34.615 0.00 0.00 33.62 3.46
2087 4835 2.489971 GTGAATCCTTGAACACGTGGA 58.510 47.619 21.57 6.50 0.00 4.02
2092 4840 1.535462 CCGTGGTGAATCCTTGAACAC 59.465 52.381 0.00 0.00 37.07 3.32
2164 4918 3.550233 GCCGCAGACTCTATTTGTCGATA 60.550 47.826 0.00 0.00 39.24 2.92
2182 4936 0.796312 TTTCAGAAATCACTCGCCGC 59.204 50.000 0.00 0.00 0.00 6.53
2183 4937 2.672874 TCATTTCAGAAATCACTCGCCG 59.327 45.455 5.32 0.00 0.00 6.46
2185 4939 3.125829 TGCTCATTTCAGAAATCACTCGC 59.874 43.478 5.32 5.26 0.00 5.03
2194 4948 7.874016 AGCATGTTAAAATTGCTCATTTCAGAA 59.126 29.630 0.00 0.00 42.88 3.02
2195 4949 7.380536 AGCATGTTAAAATTGCTCATTTCAGA 58.619 30.769 0.00 0.00 42.88 3.27
2196 4950 7.591006 AGCATGTTAAAATTGCTCATTTCAG 57.409 32.000 0.00 0.00 42.88 3.02
2205 4959 4.725790 AGAGGGAGCATGTTAAAATTGC 57.274 40.909 0.00 0.00 36.63 3.56
2206 4960 6.378280 AGGTAAGAGGGAGCATGTTAAAATTG 59.622 38.462 0.00 0.00 0.00 2.32
2207 4961 6.494059 AGGTAAGAGGGAGCATGTTAAAATT 58.506 36.000 0.00 0.00 0.00 1.82
2208 4962 6.079712 AGGTAAGAGGGAGCATGTTAAAAT 57.920 37.500 0.00 0.00 0.00 1.82
2209 4963 5.497474 GAGGTAAGAGGGAGCATGTTAAAA 58.503 41.667 0.00 0.00 0.00 1.52
2210 4964 4.080526 GGAGGTAAGAGGGAGCATGTTAAA 60.081 45.833 0.00 0.00 0.00 1.52
2211 4965 3.454812 GGAGGTAAGAGGGAGCATGTTAA 59.545 47.826 0.00 0.00 0.00 2.01
2212 4966 3.039011 GGAGGTAAGAGGGAGCATGTTA 58.961 50.000 0.00 0.00 0.00 2.41
2213 4967 1.840635 GGAGGTAAGAGGGAGCATGTT 59.159 52.381 0.00 0.00 0.00 2.71
2214 4968 1.008938 AGGAGGTAAGAGGGAGCATGT 59.991 52.381 0.00 0.00 0.00 3.21
2215 4969 1.691434 GAGGAGGTAAGAGGGAGCATG 59.309 57.143 0.00 0.00 0.00 4.06
2216 4970 1.578215 AGAGGAGGTAAGAGGGAGCAT 59.422 52.381 0.00 0.00 0.00 3.79
2217 4971 1.011595 AGAGGAGGTAAGAGGGAGCA 58.988 55.000 0.00 0.00 0.00 4.26
2218 4972 2.168458 AAGAGGAGGTAAGAGGGAGC 57.832 55.000 0.00 0.00 0.00 4.70
2219 4973 3.131400 CGAAAAGAGGAGGTAAGAGGGAG 59.869 52.174 0.00 0.00 0.00 4.30
2220 4974 3.097614 CGAAAAGAGGAGGTAAGAGGGA 58.902 50.000 0.00 0.00 0.00 4.20
2221 4975 2.418884 GCGAAAAGAGGAGGTAAGAGGG 60.419 54.545 0.00 0.00 0.00 4.30
2222 4976 2.233922 TGCGAAAAGAGGAGGTAAGAGG 59.766 50.000 0.00 0.00 0.00 3.69
2223 4977 3.594603 TGCGAAAAGAGGAGGTAAGAG 57.405 47.619 0.00 0.00 0.00 2.85
2224 4978 3.513912 TCATGCGAAAAGAGGAGGTAAGA 59.486 43.478 0.00 0.00 0.00 2.10
2225 4979 3.861840 TCATGCGAAAAGAGGAGGTAAG 58.138 45.455 0.00 0.00 0.00 2.34
2226 4980 3.513912 TCTCATGCGAAAAGAGGAGGTAA 59.486 43.478 0.00 0.00 0.00 2.85
2227 4981 3.096852 TCTCATGCGAAAAGAGGAGGTA 58.903 45.455 0.00 0.00 0.00 3.08
2228 4982 1.902508 TCTCATGCGAAAAGAGGAGGT 59.097 47.619 0.00 0.00 0.00 3.85
2229 4983 2.548875 CTCTCATGCGAAAAGAGGAGG 58.451 52.381 1.31 0.00 34.24 4.30
2233 4987 4.748892 TCTTACCTCTCATGCGAAAAGAG 58.251 43.478 2.15 2.15 36.99 2.85
2234 4988 4.801330 TCTTACCTCTCATGCGAAAAGA 57.199 40.909 0.00 0.00 0.00 2.52
2235 4989 4.331168 CCTTCTTACCTCTCATGCGAAAAG 59.669 45.833 0.00 0.00 0.00 2.27
2236 4990 4.253685 CCTTCTTACCTCTCATGCGAAAA 58.746 43.478 0.00 0.00 0.00 2.29
2237 4991 3.260884 ACCTTCTTACCTCTCATGCGAAA 59.739 43.478 0.00 0.00 0.00 3.46
2238 4992 2.832129 ACCTTCTTACCTCTCATGCGAA 59.168 45.455 0.00 0.00 0.00 4.70
2239 4993 2.457598 ACCTTCTTACCTCTCATGCGA 58.542 47.619 0.00 0.00 0.00 5.10
2240 4994 2.969628 ACCTTCTTACCTCTCATGCG 57.030 50.000 0.00 0.00 0.00 4.73
2241 4995 5.128008 ACTCTTACCTTCTTACCTCTCATGC 59.872 44.000 0.00 0.00 0.00 4.06
2242 4996 6.783708 ACTCTTACCTTCTTACCTCTCATG 57.216 41.667 0.00 0.00 0.00 3.07
2243 4997 8.896722 TTAACTCTTACCTTCTTACCTCTCAT 57.103 34.615 0.00 0.00 0.00 2.90
2244 4998 8.896722 ATTAACTCTTACCTTCTTACCTCTCA 57.103 34.615 0.00 0.00 0.00 3.27
2245 4999 8.968969 TGATTAACTCTTACCTTCTTACCTCTC 58.031 37.037 0.00 0.00 0.00 3.20
2246 5000 8.896722 TGATTAACTCTTACCTTCTTACCTCT 57.103 34.615 0.00 0.00 0.00 3.69
2247 5001 9.939802 TTTGATTAACTCTTACCTTCTTACCTC 57.060 33.333 0.00 0.00 0.00 3.85
2248 5002 9.722184 GTTTGATTAACTCTTACCTTCTTACCT 57.278 33.333 0.00 0.00 33.79 3.08
2249 5003 8.944029 GGTTTGATTAACTCTTACCTTCTTACC 58.056 37.037 0.00 0.00 36.93 2.85
2250 5004 8.944029 GGGTTTGATTAACTCTTACCTTCTTAC 58.056 37.037 0.00 0.00 34.20 2.34
2251 5005 8.662255 TGGGTTTGATTAACTCTTACCTTCTTA 58.338 33.333 0.00 0.00 38.12 2.10
2252 5006 7.447545 GTGGGTTTGATTAACTCTTACCTTCTT 59.552 37.037 0.00 0.00 38.12 2.52
2253 5007 6.940867 GTGGGTTTGATTAACTCTTACCTTCT 59.059 38.462 0.00 0.00 38.12 2.85
2254 5008 6.940867 AGTGGGTTTGATTAACTCTTACCTTC 59.059 38.462 0.00 0.00 38.12 3.46
2255 5009 6.849151 AGTGGGTTTGATTAACTCTTACCTT 58.151 36.000 0.00 0.00 38.12 3.50
2256 5010 6.449830 AGTGGGTTTGATTAACTCTTACCT 57.550 37.500 0.00 0.00 38.12 3.08
2257 5011 7.392418 AGTAGTGGGTTTGATTAACTCTTACC 58.608 38.462 0.00 0.00 38.12 2.85
2258 5012 8.843885 AAGTAGTGGGTTTGATTAACTCTTAC 57.156 34.615 0.00 0.00 38.12 2.34
2261 5015 9.449719 CATTAAGTAGTGGGTTTGATTAACTCT 57.550 33.333 0.00 0.00 38.12 3.24
2262 5016 8.182227 GCATTAAGTAGTGGGTTTGATTAACTC 58.818 37.037 0.00 0.00 37.76 3.01
2263 5017 7.668052 TGCATTAAGTAGTGGGTTTGATTAACT 59.332 33.333 0.00 0.00 36.93 2.24
2264 5018 7.822658 TGCATTAAGTAGTGGGTTTGATTAAC 58.177 34.615 0.00 0.00 35.94 2.01
2265 5019 8.410673 TTGCATTAAGTAGTGGGTTTGATTAA 57.589 30.769 0.00 0.00 0.00 1.40
2266 5020 8.588290 ATTGCATTAAGTAGTGGGTTTGATTA 57.412 30.769 0.00 0.00 0.00 1.75
2267 5021 6.909550 TTGCATTAAGTAGTGGGTTTGATT 57.090 33.333 0.00 0.00 0.00 2.57
2268 5022 6.891908 AGATTGCATTAAGTAGTGGGTTTGAT 59.108 34.615 0.00 0.00 0.00 2.57
2269 5023 6.245408 AGATTGCATTAAGTAGTGGGTTTGA 58.755 36.000 0.00 0.00 0.00 2.69
2270 5024 6.515272 AGATTGCATTAAGTAGTGGGTTTG 57.485 37.500 0.00 0.00 0.00 2.93
2271 5025 6.315393 CGTAGATTGCATTAAGTAGTGGGTTT 59.685 38.462 0.00 0.00 0.00 3.27
2272 5026 5.815740 CGTAGATTGCATTAAGTAGTGGGTT 59.184 40.000 0.00 0.00 0.00 4.11
2273 5027 5.357257 CGTAGATTGCATTAAGTAGTGGGT 58.643 41.667 0.00 0.00 0.00 4.51
2274 5028 4.750098 CCGTAGATTGCATTAAGTAGTGGG 59.250 45.833 0.00 0.00 0.00 4.61
2275 5029 4.211374 GCCGTAGATTGCATTAAGTAGTGG 59.789 45.833 0.00 0.00 0.00 4.00
2276 5030 5.050490 AGCCGTAGATTGCATTAAGTAGTG 58.950 41.667 0.00 0.00 0.00 2.74
2277 5031 5.277857 AGCCGTAGATTGCATTAAGTAGT 57.722 39.130 0.00 0.00 0.00 2.73
2278 5032 7.145985 TCTAAGCCGTAGATTGCATTAAGTAG 58.854 38.462 0.00 0.00 33.67 2.57
2279 5033 7.046292 TCTAAGCCGTAGATTGCATTAAGTA 57.954 36.000 0.00 0.00 33.67 2.24
2280 5034 5.914033 TCTAAGCCGTAGATTGCATTAAGT 58.086 37.500 0.00 0.00 33.67 2.24
2291 5045 8.865420 AGTATCAAATAGATCTAAGCCGTAGA 57.135 34.615 6.52 0.00 43.14 2.59
2292 5046 8.952278 AGAGTATCAAATAGATCTAAGCCGTAG 58.048 37.037 6.52 0.00 38.19 3.51
2293 5047 8.865420 AGAGTATCAAATAGATCTAAGCCGTA 57.135 34.615 6.52 0.00 38.19 4.02
2294 5048 7.768807 AGAGTATCAAATAGATCTAAGCCGT 57.231 36.000 6.52 0.00 38.19 5.68
2311 5065 9.474920 CCTTTTCACATGAGAGATAAGAGTATC 57.525 37.037 0.00 0.00 37.04 2.24
2312 5066 8.428063 CCCTTTTCACATGAGAGATAAGAGTAT 58.572 37.037 0.00 0.00 29.56 2.12
2313 5067 7.147655 CCCCTTTTCACATGAGAGATAAGAGTA 60.148 40.741 0.00 0.00 29.56 2.59
2314 5068 6.352565 CCCCTTTTCACATGAGAGATAAGAGT 60.353 42.308 0.00 0.00 29.56 3.24
2315 5069 6.054295 CCCCTTTTCACATGAGAGATAAGAG 58.946 44.000 0.00 0.00 29.56 2.85
2316 5070 5.726308 TCCCCTTTTCACATGAGAGATAAGA 59.274 40.000 0.00 0.00 29.56 2.10
2317 5071 5.994250 TCCCCTTTTCACATGAGAGATAAG 58.006 41.667 0.00 5.43 0.00 1.73
2318 5072 5.104360 CCTCCCCTTTTCACATGAGAGATAA 60.104 44.000 0.00 0.00 0.00 1.75
2319 5073 4.410228 CCTCCCCTTTTCACATGAGAGATA 59.590 45.833 0.00 0.00 0.00 1.98
2320 5074 3.201708 CCTCCCCTTTTCACATGAGAGAT 59.798 47.826 0.00 0.00 0.00 2.75
2321 5075 2.573462 CCTCCCCTTTTCACATGAGAGA 59.427 50.000 0.00 0.00 0.00 3.10
2322 5076 2.307098 ACCTCCCCTTTTCACATGAGAG 59.693 50.000 0.00 0.00 0.00 3.20
2323 5077 2.348472 ACCTCCCCTTTTCACATGAGA 58.652 47.619 0.00 0.00 0.00 3.27
2324 5078 2.887151 ACCTCCCCTTTTCACATGAG 57.113 50.000 0.00 0.00 0.00 2.90
2325 5079 3.913799 TCTTACCTCCCCTTTTCACATGA 59.086 43.478 0.00 0.00 0.00 3.07
2326 5080 4.301072 TCTTACCTCCCCTTTTCACATG 57.699 45.455 0.00 0.00 0.00 3.21
2327 5081 4.263949 CCTTCTTACCTCCCCTTTTCACAT 60.264 45.833 0.00 0.00 0.00 3.21
2328 5082 3.073946 CCTTCTTACCTCCCCTTTTCACA 59.926 47.826 0.00 0.00 0.00 3.58
2329 5083 3.329814 TCCTTCTTACCTCCCCTTTTCAC 59.670 47.826 0.00 0.00 0.00 3.18
2330 5084 3.587506 CTCCTTCTTACCTCCCCTTTTCA 59.412 47.826 0.00 0.00 0.00 2.69
2331 5085 3.622704 GCTCCTTCTTACCTCCCCTTTTC 60.623 52.174 0.00 0.00 0.00 2.29
2332 5086 2.309162 GCTCCTTCTTACCTCCCCTTTT 59.691 50.000 0.00 0.00 0.00 2.27
2333 5087 1.916874 GCTCCTTCTTACCTCCCCTTT 59.083 52.381 0.00 0.00 0.00 3.11
2334 5088 1.203440 TGCTCCTTCTTACCTCCCCTT 60.203 52.381 0.00 0.00 0.00 3.95
2335 5089 0.417841 TGCTCCTTCTTACCTCCCCT 59.582 55.000 0.00 0.00 0.00 4.79
2336 5090 1.141858 CATGCTCCTTCTTACCTCCCC 59.858 57.143 0.00 0.00 0.00 4.81
2337 5091 1.840635 ACATGCTCCTTCTTACCTCCC 59.159 52.381 0.00 0.00 0.00 4.30
2338 5092 3.636153 AACATGCTCCTTCTTACCTCC 57.364 47.619 0.00 0.00 0.00 4.30
2339 5093 7.448748 TTTTTAACATGCTCCTTCTTACCTC 57.551 36.000 0.00 0.00 0.00 3.85
2360 5114 7.279981 GCCAAGTGTATTTTCAAAGAGGTTTTT 59.720 33.333 0.00 0.00 0.00 1.94
2361 5115 6.761242 GCCAAGTGTATTTTCAAAGAGGTTTT 59.239 34.615 0.00 0.00 0.00 2.43
2362 5116 6.127196 TGCCAAGTGTATTTTCAAAGAGGTTT 60.127 34.615 0.00 0.00 0.00 3.27
2363 5117 5.362430 TGCCAAGTGTATTTTCAAAGAGGTT 59.638 36.000 0.00 0.00 0.00 3.50
2364 5118 4.892934 TGCCAAGTGTATTTTCAAAGAGGT 59.107 37.500 0.00 0.00 0.00 3.85
2365 5119 5.452078 TGCCAAGTGTATTTTCAAAGAGG 57.548 39.130 0.00 0.00 0.00 3.69
2366 5120 7.769272 TTTTGCCAAGTGTATTTTCAAAGAG 57.231 32.000 0.00 0.00 0.00 2.85
2367 5121 8.729805 ATTTTTGCCAAGTGTATTTTCAAAGA 57.270 26.923 0.00 0.00 0.00 2.52
2368 5122 8.829612 AGATTTTTGCCAAGTGTATTTTCAAAG 58.170 29.630 0.00 0.00 0.00 2.77
2371 5125 9.474920 CTTAGATTTTTGCCAAGTGTATTTTCA 57.525 29.630 0.00 0.00 0.00 2.69
2382 5136 4.057432 GCAGTTGCTTAGATTTTTGCCAA 58.943 39.130 0.00 0.00 38.21 4.52
2383 5137 3.069300 TGCAGTTGCTTAGATTTTTGCCA 59.931 39.130 5.62 0.00 42.66 4.92
2423 5177 7.202139 GGTTCCTGTCTATTCTTCCTCCATAAT 60.202 40.741 0.00 0.00 0.00 1.28
2438 5193 4.684724 AGGATGTTACAGGTTCCTGTCTA 58.315 43.478 25.09 13.55 44.97 2.59
2465 5220 4.437390 GGTCTACAAACCAAATCTCATGCG 60.437 45.833 0.00 0.00 39.27 4.73
2501 5673 3.944015 CCCAAGATAGAGAGTGCCAAAAG 59.056 47.826 0.00 0.00 0.00 2.27
2505 5677 1.273838 ACCCCAAGATAGAGAGTGCCA 60.274 52.381 0.00 0.00 0.00 4.92
2508 5680 4.026744 TCTGAACCCCAAGATAGAGAGTG 58.973 47.826 0.00 0.00 0.00 3.51
2510 5682 5.365025 TCATTCTGAACCCCAAGATAGAGAG 59.635 44.000 0.00 0.00 0.00 3.20
2639 5811 3.118811 CCAAAAGGAGCCACACAAAGAAA 60.119 43.478 0.00 0.00 0.00 2.52
2706 5878 3.435890 CCCTTGGTTGACTTCTACCCAAA 60.436 47.826 7.30 0.00 40.33 3.28
2749 5953 5.598416 TCTCTTAATCCTCTGATGCGAAA 57.402 39.130 0.00 0.00 0.00 3.46
2850 6054 6.144078 TCTCGACTACATAATTGCAGCTAA 57.856 37.500 0.00 0.00 0.00 3.09
2853 6057 4.208047 CACTCTCGACTACATAATTGCAGC 59.792 45.833 0.00 0.00 0.00 5.25
2856 6060 6.266323 TCTTCACTCTCGACTACATAATTGC 58.734 40.000 0.00 0.00 0.00 3.56
2857 6061 7.698628 TCTCTTCACTCTCGACTACATAATTG 58.301 38.462 0.00 0.00 0.00 2.32
2858 6062 7.867305 TCTCTTCACTCTCGACTACATAATT 57.133 36.000 0.00 0.00 0.00 1.40
2859 6063 7.717436 TCATCTCTTCACTCTCGACTACATAAT 59.283 37.037 0.00 0.00 0.00 1.28
2862 6066 5.432645 TCATCTCTTCACTCTCGACTACAT 58.567 41.667 0.00 0.00 0.00 2.29
2863 6067 4.833390 TCATCTCTTCACTCTCGACTACA 58.167 43.478 0.00 0.00 0.00 2.74
2864 6068 5.113383 TCTCATCTCTTCACTCTCGACTAC 58.887 45.833 0.00 0.00 0.00 2.73
2865 6069 5.346181 TCTCATCTCTTCACTCTCGACTA 57.654 43.478 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.