Multiple sequence alignment - TraesCS4D01G270700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G270700 chr4D 100.000 5205 0 0 1 5205 441495362 441490158 0.000000e+00 9612.0
1 TraesCS4D01G270700 chr4D 81.000 1200 169 38 1209 2379 441514127 441512958 0.000000e+00 898.0
2 TraesCS4D01G270700 chr4D 85.145 552 77 3 619 1165 441514880 441514329 1.270000e-155 560.0
3 TraesCS4D01G270700 chr4D 95.070 142 6 1 2471 2612 492804414 492804274 6.780000e-54 222.0
4 TraesCS4D01G270700 chr4A 91.740 2167 114 28 2602 4719 26066569 26068719 0.000000e+00 2950.0
5 TraesCS4D01G270700 chr4A 94.211 1883 96 8 600 2475 26064691 26066567 0.000000e+00 2861.0
6 TraesCS4D01G270700 chr4A 81.494 1794 273 29 616 2375 26012524 26014292 0.000000e+00 1419.0
7 TraesCS4D01G270700 chr4A 82.474 582 73 13 1764 2326 25804107 25804678 2.820000e-132 483.0
8 TraesCS4D01G270700 chr4A 89.441 322 30 2 4885 5203 26076679 26076999 2.260000e-108 403.0
9 TraesCS4D01G270700 chr4A 84.615 195 13 7 4717 4894 26076395 26076589 1.490000e-40 178.0
10 TraesCS4D01G270700 chr4A 81.022 137 20 5 345 477 590485115 590485249 2.560000e-18 104.0
11 TraesCS4D01G270700 chr4B 92.288 1167 67 12 1327 2478 547569142 547567984 0.000000e+00 1635.0
12 TraesCS4D01G270700 chr4B 81.250 1792 269 33 619 2375 547580505 547578746 0.000000e+00 1386.0
13 TraesCS4D01G270700 chr4B 92.308 949 52 14 2602 3539 547567985 547567047 0.000000e+00 1328.0
14 TraesCS4D01G270700 chr4B 94.201 776 23 13 576 1331 547575096 547574323 0.000000e+00 1164.0
15 TraesCS4D01G270700 chr4B 82.659 1113 169 10 639 1746 548105739 548104646 0.000000e+00 965.0
16 TraesCS4D01G270700 chr4B 91.730 653 36 7 4234 4885 547559526 547558891 0.000000e+00 891.0
17 TraesCS4D01G270700 chr4B 92.123 457 21 9 3797 4238 547566419 547565963 9.510000e-177 630.0
18 TraesCS4D01G270700 chr4B 82.064 591 74 15 1754 2326 548104557 548103981 4.720000e-130 475.0
19 TraesCS4D01G270700 chr4B 90.966 321 23 2 4885 5205 547558792 547558478 1.340000e-115 427.0
20 TraesCS4D01G270700 chr4B 93.382 272 7 4 3538 3799 547566923 547566653 4.890000e-105 392.0
21 TraesCS4D01G270700 chr4B 92.414 145 10 1 2476 2619 427488237 427488093 6.830000e-49 206.0
22 TraesCS4D01G270700 chr2B 80.884 1742 263 47 639 2352 676194667 676192968 0.000000e+00 1308.0
23 TraesCS4D01G270700 chr2B 80.311 1798 277 50 617 2379 676680362 676678607 0.000000e+00 1288.0
24 TraesCS4D01G270700 chr2B 80.092 1743 278 51 614 2323 676477864 676476158 0.000000e+00 1232.0
25 TraesCS4D01G270700 chr2B 79.012 1134 185 35 1217 2323 676485411 676484304 0.000000e+00 726.0
26 TraesCS4D01G270700 chr2B 81.883 701 105 11 640 1331 676590862 676590175 5.850000e-159 571.0
27 TraesCS4D01G270700 chr2B 79.608 510 81 15 2721 3211 676588672 676588167 1.390000e-90 344.0
28 TraesCS4D01G270700 chr2B 80.202 495 66 23 2740 3211 676192551 676192066 4.990000e-90 342.0
29 TraesCS4D01G270700 chr2B 94.815 135 6 1 2473 2606 154903601 154903735 5.280000e-50 209.0
30 TraesCS4D01G270700 chr2A 81.153 1682 261 41 614 2270 705527916 705526266 0.000000e+00 1299.0
31 TraesCS4D01G270700 chr2A 79.223 515 72 26 2723 3211 705525848 705525343 5.030000e-85 326.0
32 TraesCS4D01G270700 chr2D 80.393 1780 278 45 614 2352 564923620 564921871 0.000000e+00 1288.0
33 TraesCS4D01G270700 chr2D 78.558 513 85 15 2721 3211 564921346 564920837 1.090000e-81 315.0
34 TraesCS4D01G270700 chr2D 79.121 182 35 3 4530 4709 55180640 55180820 7.080000e-24 122.0
35 TraesCS4D01G270700 chr1B 81.876 469 63 13 13 475 91381288 91380836 4.920000e-100 375.0
36 TraesCS4D01G270700 chr1B 92.500 80 5 1 7 86 91381454 91381376 4.260000e-21 113.0
37 TraesCS4D01G270700 chr1B 92.500 80 5 1 7 86 91381568 91381490 4.260000e-21 113.0
38 TraesCS4D01G270700 chr1B 90.909 77 5 2 1 77 91381775 91381701 9.220000e-18 102.0
39 TraesCS4D01G270700 chr1B 88.608 79 8 1 1 79 91381403 91381326 1.540000e-15 95.3
40 TraesCS4D01G270700 chr1B 87.805 82 9 1 5 86 91381513 91381433 1.540000e-15 95.3
41 TraesCS4D01G270700 chr1B 86.585 82 10 1 5 86 91381627 91381547 7.180000e-14 89.8
42 TraesCS4D01G270700 chr1B 78.906 128 16 7 26 145 91381707 91381583 5.590000e-10 76.8
43 TraesCS4D01G270700 chr1B 100.000 32 0 0 13 44 91381185 91381154 5.630000e-05 60.2
44 TraesCS4D01G270700 chrUn 96.183 131 5 0 2477 2607 11031660 11031790 1.140000e-51 215.0
45 TraesCS4D01G270700 chr1D 95.489 133 5 1 2473 2605 255827885 255827754 1.470000e-50 211.0
46 TraesCS4D01G270700 chr3B 94.815 135 6 1 2477 2611 595367143 595367276 5.280000e-50 209.0
47 TraesCS4D01G270700 chr3B 87.719 171 15 6 2472 2638 501130605 501130437 1.480000e-45 195.0
48 TraesCS4D01G270700 chr1A 94.815 135 4 3 2477 2610 380966225 380966093 1.900000e-49 207.0
49 TraesCS4D01G270700 chr7B 93.478 138 7 2 2473 2609 678632355 678632491 2.460000e-48 204.0
50 TraesCS4D01G270700 chr3D 100.000 29 0 0 4777 4805 500666249 500666221 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G270700 chr4D 441490158 441495362 5204 True 9612.00 9612 100.00000 1 5205 1 chr4D.!!$R1 5204
1 TraesCS4D01G270700 chr4D 441512958 441514880 1922 True 729.00 898 83.07250 619 2379 2 chr4D.!!$R3 1760
2 TraesCS4D01G270700 chr4A 26064691 26068719 4028 False 2905.50 2950 92.97550 600 4719 2 chr4A.!!$F4 4119
3 TraesCS4D01G270700 chr4A 26012524 26014292 1768 False 1419.00 1419 81.49400 616 2375 1 chr4A.!!$F2 1759
4 TraesCS4D01G270700 chr4A 25804107 25804678 571 False 483.00 483 82.47400 1764 2326 1 chr4A.!!$F1 562
5 TraesCS4D01G270700 chr4A 26076395 26076999 604 False 290.50 403 87.02800 4717 5203 2 chr4A.!!$F5 486
6 TraesCS4D01G270700 chr4B 547574323 547580505 6182 True 1275.00 1386 87.72550 576 2375 2 chr4B.!!$R4 1799
7 TraesCS4D01G270700 chr4B 547565963 547569142 3179 True 996.25 1635 92.52525 1327 4238 4 chr4B.!!$R3 2911
8 TraesCS4D01G270700 chr4B 548103981 548105739 1758 True 720.00 965 82.36150 639 2326 2 chr4B.!!$R5 1687
9 TraesCS4D01G270700 chr4B 547558478 547559526 1048 True 659.00 891 91.34800 4234 5205 2 chr4B.!!$R2 971
10 TraesCS4D01G270700 chr2B 676678607 676680362 1755 True 1288.00 1288 80.31100 617 2379 1 chr2B.!!$R3 1762
11 TraesCS4D01G270700 chr2B 676476158 676477864 1706 True 1232.00 1232 80.09200 614 2323 1 chr2B.!!$R1 1709
12 TraesCS4D01G270700 chr2B 676192066 676194667 2601 True 825.00 1308 80.54300 639 3211 2 chr2B.!!$R4 2572
13 TraesCS4D01G270700 chr2B 676484304 676485411 1107 True 726.00 726 79.01200 1217 2323 1 chr2B.!!$R2 1106
14 TraesCS4D01G270700 chr2B 676588167 676590862 2695 True 457.50 571 80.74550 640 3211 2 chr2B.!!$R5 2571
15 TraesCS4D01G270700 chr2A 705525343 705527916 2573 True 812.50 1299 80.18800 614 3211 2 chr2A.!!$R1 2597
16 TraesCS4D01G270700 chr2D 564920837 564923620 2783 True 801.50 1288 79.47550 614 3211 2 chr2D.!!$R1 2597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.031721 GACGCTCCCTACCGGTATTG 59.968 60.0 16.25 9.46 0.00 1.90 F
575 576 0.036022 ACTCCCTTTCTCAGCAGTGC 59.964 55.0 7.13 7.13 0.00 4.40 F
635 638 0.100861 CTCCCTTCTCGTAGCCGTTC 59.899 60.0 0.00 0.00 35.01 3.95 F
2486 3320 0.320374 TGCACAAACTACTCCCTCCG 59.680 55.0 0.00 0.00 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1742 2061 0.889994 TGCAATCTGTTGATGGGTGC 59.110 50.000 0.00 0.00 37.53 5.01 R
2059 2396 1.679680 CATTTGGAGGTGCCTAGCATG 59.320 52.381 0.00 0.00 41.91 4.06 R
2581 3415 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17 R
4295 5802 1.153628 GATAACGAGCAGCCACGGT 60.154 57.895 12.98 9.45 0.00 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 3.570638 CTCGCCGGAGCTGCAATG 61.571 66.667 5.05 0.00 36.60 2.82
61 62 3.207669 GCCGGAGCTGCAATGGAG 61.208 66.667 5.05 0.00 35.50 3.86
62 63 3.207669 CCGGAGCTGCAATGGAGC 61.208 66.667 19.23 19.23 36.65 4.70
63 64 3.570638 CGGAGCTGCAATGGAGCG 61.571 66.667 20.52 3.42 41.61 5.03
64 65 3.885521 GGAGCTGCAATGGAGCGC 61.886 66.667 20.71 20.71 41.61 5.92
65 66 2.823147 GAGCTGCAATGGAGCGCT 60.823 61.111 21.43 11.27 43.34 5.92
66 67 2.360852 AGCTGCAATGGAGCGCTT 60.361 55.556 20.52 0.79 41.61 4.68
67 68 2.202570 GCTGCAATGGAGCGCTTG 60.203 61.111 13.26 6.97 37.31 4.01
68 69 2.986306 GCTGCAATGGAGCGCTTGT 61.986 57.895 13.26 0.00 37.31 3.16
69 70 1.136147 CTGCAATGGAGCGCTTGTC 59.864 57.895 13.26 5.30 37.31 3.18
70 71 2.099062 GCAATGGAGCGCTTGTCG 59.901 61.111 13.26 0.29 42.12 4.35
71 72 2.787249 CAATGGAGCGCTTGTCGG 59.213 61.111 13.26 0.00 38.94 4.79
72 73 1.741401 CAATGGAGCGCTTGTCGGA 60.741 57.895 13.26 0.00 38.94 4.55
73 74 1.741770 AATGGAGCGCTTGTCGGAC 60.742 57.895 13.26 0.00 38.94 4.79
74 75 3.989698 ATGGAGCGCTTGTCGGACG 62.990 63.158 13.26 0.00 38.94 4.79
80 81 4.070552 GCTTGTCGGACGCTCCCT 62.071 66.667 3.34 0.00 31.13 4.20
81 82 2.707849 GCTTGTCGGACGCTCCCTA 61.708 63.158 3.34 0.00 31.13 3.53
82 83 1.139095 CTTGTCGGACGCTCCCTAC 59.861 63.158 3.34 0.00 31.13 3.18
83 84 2.280823 CTTGTCGGACGCTCCCTACC 62.281 65.000 3.34 0.00 31.13 3.18
84 85 3.885521 GTCGGACGCTCCCTACCG 61.886 72.222 0.00 0.00 45.61 4.02
87 88 2.124151 GGACGCTCCCTACCGGTA 60.124 66.667 14.95 14.95 0.00 4.02
88 89 1.530183 GGACGCTCCCTACCGGTAT 60.530 63.158 16.25 0.00 0.00 2.73
89 90 1.111715 GGACGCTCCCTACCGGTATT 61.112 60.000 16.25 0.00 0.00 1.89
90 91 0.031721 GACGCTCCCTACCGGTATTG 59.968 60.000 16.25 9.46 0.00 1.90
91 92 1.300697 CGCTCCCTACCGGTATTGC 60.301 63.158 16.25 15.02 0.00 3.56
92 93 1.827394 GCTCCCTACCGGTATTGCA 59.173 57.895 16.25 0.00 0.00 4.08
93 94 0.179468 GCTCCCTACCGGTATTGCAA 59.821 55.000 16.25 0.00 0.00 4.08
94 95 1.202770 GCTCCCTACCGGTATTGCAAT 60.203 52.381 16.25 17.56 0.00 3.56
95 96 2.494059 CTCCCTACCGGTATTGCAATG 58.506 52.381 22.27 7.55 0.00 2.82
96 97 1.142060 TCCCTACCGGTATTGCAATGG 59.858 52.381 22.27 16.48 0.00 3.16
97 98 1.133915 CCCTACCGGTATTGCAATGGT 60.134 52.381 22.27 21.06 36.72 3.55
98 99 1.946768 CCTACCGGTATTGCAATGGTG 59.053 52.381 23.49 15.37 34.18 4.17
107 108 4.505217 GCAATGGTGCGCTCGTCG 62.505 66.667 9.73 0.00 41.93 5.12
131 132 3.814268 CCTCCCGGCGTTGCAATG 61.814 66.667 14.54 14.54 0.00 2.82
132 133 3.814268 CTCCCGGCGTTGCAATGG 61.814 66.667 19.93 11.17 0.00 3.16
133 134 4.337177 TCCCGGCGTTGCAATGGA 62.337 61.111 19.93 10.04 0.00 3.41
134 135 3.814268 CCCGGCGTTGCAATGGAG 61.814 66.667 19.93 5.42 0.00 3.86
135 136 4.481112 CCGGCGTTGCAATGGAGC 62.481 66.667 19.93 14.20 0.00 4.70
136 137 3.736100 CGGCGTTGCAATGGAGCA 61.736 61.111 19.93 0.00 43.99 4.26
137 138 2.126346 GGCGTTGCAATGGAGCAC 60.126 61.111 19.93 2.92 45.61 4.40
138 139 2.629656 GGCGTTGCAATGGAGCACT 61.630 57.895 19.93 0.00 45.61 4.40
139 140 1.154150 GCGTTGCAATGGAGCACTC 60.154 57.895 19.93 0.00 45.61 3.51
140 141 1.133253 CGTTGCAATGGAGCACTCG 59.867 57.895 11.00 0.00 45.61 4.18
141 142 1.154150 GTTGCAATGGAGCACTCGC 60.154 57.895 0.59 0.00 45.61 5.03
142 143 2.334946 TTGCAATGGAGCACTCGCC 61.335 57.895 0.00 0.00 45.61 5.54
143 144 3.869272 GCAATGGAGCACTCGCCG 61.869 66.667 0.00 0.00 39.83 6.46
144 145 3.197790 CAATGGAGCACTCGCCGG 61.198 66.667 0.00 0.00 39.83 6.13
160 161 3.885521 GGCGCTGCATTGGAGCTC 61.886 66.667 24.89 18.43 34.03 4.09
161 162 2.823147 GCGCTGCATTGGAGCTCT 60.823 61.111 24.89 0.00 34.03 4.09
162 163 3.099438 CGCTGCATTGGAGCTCTG 58.901 61.111 24.89 8.60 34.03 3.35
163 164 1.744368 CGCTGCATTGGAGCTCTGT 60.744 57.895 24.89 0.00 34.03 3.41
164 165 1.703438 CGCTGCATTGGAGCTCTGTC 61.703 60.000 24.89 0.00 34.03 3.51
165 166 1.375098 GCTGCATTGGAGCTCTGTCC 61.375 60.000 21.41 0.00 37.10 4.02
166 167 1.078918 TGCATTGGAGCTCTGTCCG 60.079 57.895 14.64 0.06 39.81 4.79
167 168 1.817099 GCATTGGAGCTCTGTCCGG 60.817 63.158 14.64 0.00 39.81 5.14
168 169 1.599047 CATTGGAGCTCTGTCCGGT 59.401 57.895 14.64 0.00 39.81 5.28
169 170 0.742281 CATTGGAGCTCTGTCCGGTG 60.742 60.000 14.64 0.03 39.81 4.94
170 171 1.903877 ATTGGAGCTCTGTCCGGTGG 61.904 60.000 14.64 0.00 39.81 4.61
171 172 2.997897 GGAGCTCTGTCCGGTGGT 60.998 66.667 14.64 0.00 0.00 4.16
172 173 2.574399 GAGCTCTGTCCGGTGGTC 59.426 66.667 6.43 0.00 0.00 4.02
173 174 1.979693 GAGCTCTGTCCGGTGGTCT 60.980 63.158 6.43 0.00 0.00 3.85
174 175 1.939769 GAGCTCTGTCCGGTGGTCTC 61.940 65.000 6.43 0.00 0.00 3.36
175 176 2.878429 CTCTGTCCGGTGGTCTCG 59.122 66.667 0.00 0.00 0.00 4.04
176 177 1.674651 CTCTGTCCGGTGGTCTCGA 60.675 63.158 0.00 0.00 0.00 4.04
177 178 1.228337 TCTGTCCGGTGGTCTCGAA 60.228 57.895 0.00 0.00 0.00 3.71
178 179 1.213013 CTGTCCGGTGGTCTCGAAG 59.787 63.158 0.00 0.00 0.00 3.79
179 180 2.126031 GTCCGGTGGTCTCGAAGC 60.126 66.667 0.00 0.00 0.00 3.86
180 181 2.282958 TCCGGTGGTCTCGAAGCT 60.283 61.111 0.00 0.00 0.00 3.74
181 182 2.125912 CCGGTGGTCTCGAAGCTG 60.126 66.667 0.00 0.00 0.00 4.24
182 183 2.811317 CGGTGGTCTCGAAGCTGC 60.811 66.667 0.00 0.00 0.00 5.25
183 184 2.811317 GGTGGTCTCGAAGCTGCG 60.811 66.667 8.15 8.15 0.00 5.18
184 185 2.258591 GTGGTCTCGAAGCTGCGA 59.741 61.111 17.74 17.74 38.74 5.10
185 186 1.153745 GTGGTCTCGAAGCTGCGAT 60.154 57.895 19.23 0.00 39.85 4.58
186 187 1.153765 TGGTCTCGAAGCTGCGATG 60.154 57.895 19.23 12.03 39.85 3.84
187 188 2.520904 GGTCTCGAAGCTGCGATGC 61.521 63.158 19.23 13.13 39.85 3.91
188 189 1.807165 GTCTCGAAGCTGCGATGCA 60.807 57.895 19.23 1.37 39.85 3.96
189 190 1.807165 TCTCGAAGCTGCGATGCAC 60.807 57.895 19.23 0.00 39.85 4.57
190 191 2.806856 CTCGAAGCTGCGATGCACC 61.807 63.158 19.23 0.00 39.85 5.01
191 192 2.816958 CGAAGCTGCGATGCACCT 60.817 61.111 9.01 0.00 33.79 4.00
192 193 2.806856 CGAAGCTGCGATGCACCTC 61.807 63.158 9.01 0.00 33.79 3.85
193 194 1.449246 GAAGCTGCGATGCACCTCT 60.449 57.895 0.00 0.00 33.79 3.69
194 195 1.427592 GAAGCTGCGATGCACCTCTC 61.428 60.000 0.00 0.00 33.79 3.20
195 196 3.260483 GCTGCGATGCACCTCTCG 61.260 66.667 3.09 3.09 37.92 4.04
196 197 2.584418 CTGCGATGCACCTCTCGG 60.584 66.667 9.30 0.00 35.48 4.63
197 198 4.819761 TGCGATGCACCTCTCGGC 62.820 66.667 9.30 3.01 35.48 5.54
214 215 4.233635 CGCAGCAATGGAGCGCTC 62.234 66.667 29.38 29.38 45.14 5.03
215 216 4.233635 GCAGCAATGGAGCGCTCG 62.234 66.667 29.81 17.61 35.96 5.03
216 217 4.233635 CAGCAATGGAGCGCTCGC 62.234 66.667 29.81 25.84 35.96 5.03
228 229 3.660111 GCTCGCCGGTGTTGCTTT 61.660 61.111 21.79 0.00 0.00 3.51
229 230 2.252260 CTCGCCGGTGTTGCTTTG 59.748 61.111 16.01 0.00 0.00 2.77
230 231 3.879351 CTCGCCGGTGTTGCTTTGC 62.879 63.158 16.01 0.00 0.00 3.68
231 232 4.263209 CGCCGGTGTTGCTTTGCA 62.263 61.111 6.91 0.00 36.47 4.08
232 233 2.355009 GCCGGTGTTGCTTTGCAG 60.355 61.111 1.90 0.00 40.61 4.41
281 282 2.047939 GCAACCAATGGCACCAGC 60.048 61.111 0.00 0.00 41.10 4.85
282 283 2.259204 CAACCAATGGCACCAGCG 59.741 61.111 0.00 0.00 43.41 5.18
283 284 3.683937 AACCAATGGCACCAGCGC 61.684 61.111 0.00 0.00 43.41 5.92
284 285 4.666253 ACCAATGGCACCAGCGCT 62.666 61.111 2.64 2.64 43.41 5.92
285 286 2.438254 CCAATGGCACCAGCGCTA 60.438 61.111 10.99 0.00 43.41 4.26
286 287 2.764314 CCAATGGCACCAGCGCTAC 61.764 63.158 10.99 0.00 43.41 3.58
287 288 2.438434 AATGGCACCAGCGCTACC 60.438 61.111 10.99 10.46 43.41 3.18
288 289 4.838152 ATGGCACCAGCGCTACCG 62.838 66.667 10.99 2.66 43.41 4.02
299 300 2.939022 GCTACCGGCGATGCAATC 59.061 61.111 9.30 0.00 40.89 2.67
300 301 1.887242 GCTACCGGCGATGCAATCA 60.887 57.895 9.30 0.00 45.97 2.57
301 302 1.835483 GCTACCGGCGATGCAATCAG 61.835 60.000 9.30 0.00 45.97 2.90
302 303 1.224069 CTACCGGCGATGCAATCAGG 61.224 60.000 9.30 0.00 45.97 3.86
303 304 2.658679 TACCGGCGATGCAATCAGGG 62.659 60.000 9.30 0.00 45.97 4.45
304 305 3.957535 CGGCGATGCAATCAGGGC 61.958 66.667 0.00 0.00 45.97 5.19
305 306 2.829914 GGCGATGCAATCAGGGCA 60.830 61.111 0.00 0.00 45.97 5.36
306 307 2.417257 GGCGATGCAATCAGGGCAA 61.417 57.895 0.00 0.00 45.97 4.52
307 308 1.065273 GCGATGCAATCAGGGCAAG 59.935 57.895 0.00 0.00 45.97 4.01
308 309 1.065273 CGATGCAATCAGGGCAAGC 59.935 57.895 0.00 0.00 45.97 4.01
309 310 1.065273 GATGCAATCAGGGCAAGCG 59.935 57.895 0.00 0.00 45.60 4.68
310 311 2.345880 GATGCAATCAGGGCAAGCGG 62.346 60.000 0.00 0.00 45.60 5.52
311 312 3.830192 GCAATCAGGGCAAGCGGG 61.830 66.667 0.00 0.00 0.00 6.13
312 313 2.361610 CAATCAGGGCAAGCGGGT 60.362 61.111 0.00 0.00 0.00 5.28
313 314 2.361610 AATCAGGGCAAGCGGGTG 60.362 61.111 0.00 0.00 0.00 4.61
314 315 3.944250 AATCAGGGCAAGCGGGTGG 62.944 63.158 0.00 0.00 0.00 4.61
328 329 4.626081 GTGGCCGGCCGCTGATAT 62.626 66.667 44.49 0.00 42.89 1.63
329 330 2.920384 TGGCCGGCCGCTGATATA 60.920 61.111 39.00 17.87 39.42 0.86
330 331 2.125512 GGCCGGCCGCTGATATAG 60.126 66.667 33.60 4.18 37.74 1.31
331 332 2.646175 GGCCGGCCGCTGATATAGA 61.646 63.158 33.60 0.00 37.74 1.98
332 333 1.292223 GCCGGCCGCTGATATAGAA 59.708 57.895 22.85 0.00 0.00 2.10
333 334 0.737715 GCCGGCCGCTGATATAGAAG 60.738 60.000 22.85 1.82 0.00 2.85
334 335 0.888619 CCGGCCGCTGATATAGAAGA 59.111 55.000 22.85 0.00 0.00 2.87
335 336 1.135257 CCGGCCGCTGATATAGAAGAG 60.135 57.143 22.85 0.00 0.00 2.85
336 337 1.813178 CGGCCGCTGATATAGAAGAGA 59.187 52.381 14.67 0.00 0.00 3.10
337 338 2.159448 CGGCCGCTGATATAGAAGAGAG 60.159 54.545 14.67 0.00 0.00 3.20
338 339 3.085533 GGCCGCTGATATAGAAGAGAGA 58.914 50.000 0.00 0.00 0.00 3.10
339 340 3.128589 GGCCGCTGATATAGAAGAGAGAG 59.871 52.174 0.00 0.00 0.00 3.20
340 341 4.006989 GCCGCTGATATAGAAGAGAGAGA 58.993 47.826 0.00 0.00 0.00 3.10
341 342 4.640201 GCCGCTGATATAGAAGAGAGAGAT 59.360 45.833 0.00 0.00 0.00 2.75
342 343 5.449041 GCCGCTGATATAGAAGAGAGAGATG 60.449 48.000 0.00 0.00 0.00 2.90
343 344 5.879777 CCGCTGATATAGAAGAGAGAGATGA 59.120 44.000 0.00 0.00 0.00 2.92
344 345 6.543465 CCGCTGATATAGAAGAGAGAGATGAT 59.457 42.308 0.00 0.00 0.00 2.45
345 346 7.412063 CGCTGATATAGAAGAGAGAGATGATG 58.588 42.308 0.00 0.00 0.00 3.07
346 347 7.467675 CGCTGATATAGAAGAGAGAGATGATGG 60.468 44.444 0.00 0.00 0.00 3.51
347 348 7.201848 GCTGATATAGAAGAGAGAGATGATGGG 60.202 44.444 0.00 0.00 0.00 4.00
348 349 7.937591 TGATATAGAAGAGAGAGATGATGGGA 58.062 38.462 0.00 0.00 0.00 4.37
349 350 8.054572 TGATATAGAAGAGAGAGATGATGGGAG 58.945 40.741 0.00 0.00 0.00 4.30
350 351 3.848303 AGAAGAGAGAGATGATGGGAGG 58.152 50.000 0.00 0.00 0.00 4.30
351 352 2.700353 AGAGAGAGATGATGGGAGGG 57.300 55.000 0.00 0.00 0.00 4.30
352 353 1.149711 AGAGAGAGATGATGGGAGGGG 59.850 57.143 0.00 0.00 0.00 4.79
353 354 0.193069 AGAGAGATGATGGGAGGGGG 59.807 60.000 0.00 0.00 0.00 5.40
354 355 1.463018 AGAGATGATGGGAGGGGGC 60.463 63.158 0.00 0.00 0.00 5.80
355 356 2.851102 AGATGATGGGAGGGGGCG 60.851 66.667 0.00 0.00 0.00 6.13
356 357 3.171388 GATGATGGGAGGGGGCGT 61.171 66.667 0.00 0.00 0.00 5.68
357 358 3.482232 GATGATGGGAGGGGGCGTG 62.482 68.421 0.00 0.00 0.00 5.34
359 360 4.489771 GATGGGAGGGGGCGTGTG 62.490 72.222 0.00 0.00 0.00 3.82
363 364 4.468689 GGAGGGGGCGTGTGCTAC 62.469 72.222 0.00 0.00 42.25 3.58
376 377 2.029666 GCTACGGGAGCGATGCAT 59.970 61.111 0.00 0.00 42.62 3.96
377 378 2.313172 GCTACGGGAGCGATGCATG 61.313 63.158 2.46 0.00 42.62 4.06
378 379 1.363807 CTACGGGAGCGATGCATGA 59.636 57.895 2.46 0.00 0.00 3.07
379 380 0.037882 CTACGGGAGCGATGCATGAT 60.038 55.000 2.46 0.00 0.00 2.45
380 381 0.038251 TACGGGAGCGATGCATGATC 60.038 55.000 2.46 4.83 0.00 2.92
381 382 2.031516 CGGGAGCGATGCATGATCC 61.032 63.158 19.11 19.11 41.18 3.36
382 383 2.031516 GGGAGCGATGCATGATCCG 61.032 63.158 19.99 12.49 42.82 4.18
383 384 1.301244 GGAGCGATGCATGATCCGT 60.301 57.895 2.46 0.00 31.41 4.69
384 385 1.563435 GGAGCGATGCATGATCCGTG 61.563 60.000 2.46 0.00 31.41 4.94
385 386 0.598419 GAGCGATGCATGATCCGTGA 60.598 55.000 2.46 0.00 0.00 4.35
386 387 0.599466 AGCGATGCATGATCCGTGAG 60.599 55.000 2.46 0.00 0.00 3.51
387 388 0.598419 GCGATGCATGATCCGTGAGA 60.598 55.000 2.46 0.00 0.00 3.27
388 389 1.416373 CGATGCATGATCCGTGAGAG 58.584 55.000 2.46 0.00 0.00 3.20
389 390 1.793258 GATGCATGATCCGTGAGAGG 58.207 55.000 2.46 0.00 0.00 3.69
390 391 0.395686 ATGCATGATCCGTGAGAGGG 59.604 55.000 0.00 0.00 0.00 4.30
391 392 1.596477 GCATGATCCGTGAGAGGGC 60.596 63.158 0.00 0.00 0.00 5.19
392 393 1.070445 CATGATCCGTGAGAGGGCC 59.930 63.158 0.00 0.00 0.00 5.80
393 394 1.383109 ATGATCCGTGAGAGGGCCA 60.383 57.895 6.18 0.00 0.00 5.36
394 395 0.982852 ATGATCCGTGAGAGGGCCAA 60.983 55.000 6.18 0.00 0.00 4.52
395 396 1.144936 GATCCGTGAGAGGGCCAAG 59.855 63.158 6.18 0.00 0.00 3.61
396 397 2.932130 GATCCGTGAGAGGGCCAAGC 62.932 65.000 6.18 0.00 0.00 4.01
398 399 4.069232 CGTGAGAGGGCCAAGCGA 62.069 66.667 6.18 0.00 0.00 4.93
399 400 2.435059 GTGAGAGGGCCAAGCGAC 60.435 66.667 6.18 0.00 0.00 5.19
400 401 4.069232 TGAGAGGGCCAAGCGACG 62.069 66.667 6.18 0.00 0.00 5.12
401 402 4.821589 GAGAGGGCCAAGCGACGG 62.822 72.222 6.18 0.00 0.00 4.79
408 409 2.126071 CCAAGCGACGGTCGTGAT 60.126 61.111 28.75 14.45 42.81 3.06
409 410 2.444624 CCAAGCGACGGTCGTGATG 61.445 63.158 28.75 22.93 42.81 3.07
410 411 2.126071 AAGCGACGGTCGTGATGG 60.126 61.111 28.75 3.38 42.81 3.51
411 412 2.927580 AAGCGACGGTCGTGATGGT 61.928 57.895 28.75 5.68 42.81 3.55
412 413 3.179265 GCGACGGTCGTGATGGTG 61.179 66.667 28.75 1.94 42.81 4.17
413 414 3.179265 CGACGGTCGTGATGGTGC 61.179 66.667 21.68 0.00 34.72 5.01
414 415 2.048597 GACGGTCGTGATGGTGCA 60.049 61.111 0.00 0.00 0.00 4.57
415 416 1.447838 GACGGTCGTGATGGTGCAT 60.448 57.895 0.00 0.00 0.00 3.96
416 417 0.179121 GACGGTCGTGATGGTGCATA 60.179 55.000 0.00 0.00 0.00 3.14
417 418 0.464036 ACGGTCGTGATGGTGCATAT 59.536 50.000 0.00 0.00 0.00 1.78
418 419 1.139989 CGGTCGTGATGGTGCATATC 58.860 55.000 6.90 6.90 0.00 1.63
419 420 1.269778 CGGTCGTGATGGTGCATATCT 60.270 52.381 13.09 0.00 0.00 1.98
420 421 2.030274 CGGTCGTGATGGTGCATATCTA 60.030 50.000 13.09 0.85 0.00 1.98
421 422 3.552068 CGGTCGTGATGGTGCATATCTAA 60.552 47.826 13.09 0.00 0.00 2.10
422 423 3.741344 GGTCGTGATGGTGCATATCTAAC 59.259 47.826 13.09 9.06 0.00 2.34
423 424 3.425525 GTCGTGATGGTGCATATCTAACG 59.574 47.826 14.88 14.88 0.00 3.18
424 425 2.731451 CGTGATGGTGCATATCTAACGG 59.269 50.000 13.09 1.41 0.00 4.44
425 426 3.728845 GTGATGGTGCATATCTAACGGT 58.271 45.455 13.09 0.00 0.00 4.83
426 427 4.127171 GTGATGGTGCATATCTAACGGTT 58.873 43.478 13.09 0.00 0.00 4.44
427 428 4.024893 GTGATGGTGCATATCTAACGGTTG 60.025 45.833 3.07 0.00 0.00 3.77
428 429 3.620427 TGGTGCATATCTAACGGTTGT 57.380 42.857 3.07 0.00 0.00 3.32
429 430 4.739587 TGGTGCATATCTAACGGTTGTA 57.260 40.909 3.07 0.00 0.00 2.41
430 431 4.689071 TGGTGCATATCTAACGGTTGTAG 58.311 43.478 3.07 0.00 0.00 2.74
431 432 4.403113 TGGTGCATATCTAACGGTTGTAGA 59.597 41.667 3.07 0.00 0.00 2.59
432 433 4.982916 GGTGCATATCTAACGGTTGTAGAG 59.017 45.833 3.07 0.00 0.00 2.43
433 434 4.982916 GTGCATATCTAACGGTTGTAGAGG 59.017 45.833 3.07 0.00 0.00 3.69
434 435 3.988517 GCATATCTAACGGTTGTAGAGGC 59.011 47.826 3.07 0.00 0.00 4.70
435 436 2.865343 ATCTAACGGTTGTAGAGGCG 57.135 50.000 3.07 0.00 0.00 5.52
436 437 0.813184 TCTAACGGTTGTAGAGGCGG 59.187 55.000 3.07 0.00 0.00 6.13
437 438 0.804933 CTAACGGTTGTAGAGGCGGC 60.805 60.000 0.00 0.00 0.00 6.53
438 439 1.252904 TAACGGTTGTAGAGGCGGCT 61.253 55.000 13.09 13.09 0.00 5.52
439 440 2.108278 AACGGTTGTAGAGGCGGCTT 62.108 55.000 14.76 5.90 0.00 4.35
440 441 1.252904 ACGGTTGTAGAGGCGGCTTA 61.253 55.000 14.76 4.83 0.00 3.09
441 442 0.104304 CGGTTGTAGAGGCGGCTTAT 59.896 55.000 14.76 8.00 0.00 1.73
442 443 1.583054 GGTTGTAGAGGCGGCTTATG 58.417 55.000 14.76 0.00 0.00 1.90
443 444 1.134491 GGTTGTAGAGGCGGCTTATGT 60.134 52.381 14.76 0.79 0.00 2.29
444 445 2.629051 GTTGTAGAGGCGGCTTATGTT 58.371 47.619 14.76 0.00 0.00 2.71
445 446 2.596904 TGTAGAGGCGGCTTATGTTC 57.403 50.000 14.76 0.00 0.00 3.18
446 447 1.138266 TGTAGAGGCGGCTTATGTTCC 59.862 52.381 14.76 0.00 0.00 3.62
447 448 0.756903 TAGAGGCGGCTTATGTTCCC 59.243 55.000 14.76 0.00 0.00 3.97
448 449 1.526225 GAGGCGGCTTATGTTCCCC 60.526 63.158 14.76 0.00 0.00 4.81
449 450 1.984288 GAGGCGGCTTATGTTCCCCT 61.984 60.000 14.76 0.00 0.00 4.79
450 451 0.693092 AGGCGGCTTATGTTCCCCTA 60.693 55.000 5.25 0.00 0.00 3.53
451 452 0.400594 GGCGGCTTATGTTCCCCTAT 59.599 55.000 0.00 0.00 0.00 2.57
452 453 1.626825 GGCGGCTTATGTTCCCCTATA 59.373 52.381 0.00 0.00 0.00 1.31
453 454 2.039348 GGCGGCTTATGTTCCCCTATAA 59.961 50.000 0.00 0.00 0.00 0.98
454 455 3.308188 GGCGGCTTATGTTCCCCTATAAT 60.308 47.826 0.00 0.00 0.00 1.28
455 456 3.939592 GCGGCTTATGTTCCCCTATAATC 59.060 47.826 0.00 0.00 0.00 1.75
456 457 4.564821 GCGGCTTATGTTCCCCTATAATCA 60.565 45.833 0.00 0.00 0.00 2.57
457 458 5.556915 CGGCTTATGTTCCCCTATAATCAA 58.443 41.667 0.00 0.00 0.00 2.57
458 459 6.180472 CGGCTTATGTTCCCCTATAATCAAT 58.820 40.000 0.00 0.00 0.00 2.57
459 460 6.316390 CGGCTTATGTTCCCCTATAATCAATC 59.684 42.308 0.00 0.00 0.00 2.67
460 461 6.316390 GGCTTATGTTCCCCTATAATCAATCG 59.684 42.308 0.00 0.00 0.00 3.34
461 462 6.316390 GCTTATGTTCCCCTATAATCAATCGG 59.684 42.308 0.00 0.00 0.00 4.18
462 463 7.562259 TTATGTTCCCCTATAATCAATCGGA 57.438 36.000 0.00 0.00 0.00 4.55
463 464 6.642733 ATGTTCCCCTATAATCAATCGGAT 57.357 37.500 0.00 0.00 38.05 4.18
464 465 5.804639 TGTTCCCCTATAATCAATCGGATG 58.195 41.667 0.00 0.00 36.02 3.51
465 466 5.546110 TGTTCCCCTATAATCAATCGGATGA 59.454 40.000 0.00 0.00 36.02 2.92
466 467 6.215431 TGTTCCCCTATAATCAATCGGATGAT 59.785 38.462 0.00 0.00 41.74 2.45
468 469 7.270832 TCCCCTATAATCAATCGGATGATTT 57.729 36.000 17.64 10.62 45.39 2.17
469 470 7.112122 TCCCCTATAATCAATCGGATGATTTG 58.888 38.462 17.64 10.72 45.39 2.32
470 471 6.886459 CCCCTATAATCAATCGGATGATTTGT 59.114 38.462 17.64 11.61 45.39 2.83
471 472 8.046708 CCCCTATAATCAATCGGATGATTTGTA 58.953 37.037 17.64 11.97 45.39 2.41
472 473 9.102757 CCCTATAATCAATCGGATGATTTGTAG 57.897 37.037 17.64 17.49 45.39 2.74
473 474 8.607459 CCTATAATCAATCGGATGATTTGTAGC 58.393 37.037 17.64 0.00 45.39 3.58
474 475 7.984422 ATAATCAATCGGATGATTTGTAGCA 57.016 32.000 17.64 4.10 45.39 3.49
475 476 5.936686 ATCAATCGGATGATTTGTAGCAG 57.063 39.130 0.00 0.00 42.14 4.24
476 477 3.561310 TCAATCGGATGATTTGTAGCAGC 59.439 43.478 0.00 0.00 42.14 5.25
477 478 1.570813 TCGGATGATTTGTAGCAGCG 58.429 50.000 0.00 0.00 0.00 5.18
478 479 0.041839 CGGATGATTTGTAGCAGCGC 60.042 55.000 0.00 0.00 0.00 5.92
479 480 0.308993 GGATGATTTGTAGCAGCGCC 59.691 55.000 2.29 0.00 0.00 6.53
480 481 1.303309 GATGATTTGTAGCAGCGCCT 58.697 50.000 2.29 0.00 0.00 5.52
481 482 1.672881 GATGATTTGTAGCAGCGCCTT 59.327 47.619 2.29 0.00 0.00 4.35
482 483 1.533625 TGATTTGTAGCAGCGCCTTT 58.466 45.000 2.29 0.00 0.00 3.11
483 484 1.199789 TGATTTGTAGCAGCGCCTTTG 59.800 47.619 2.29 0.00 0.00 2.77
484 485 1.200020 GATTTGTAGCAGCGCCTTTGT 59.800 47.619 2.29 0.00 0.00 2.83
485 486 0.310543 TTTGTAGCAGCGCCTTTGTG 59.689 50.000 2.29 0.00 0.00 3.33
486 487 0.533978 TTGTAGCAGCGCCTTTGTGA 60.534 50.000 2.29 0.00 0.00 3.58
487 488 0.533978 TGTAGCAGCGCCTTTGTGAA 60.534 50.000 2.29 0.00 0.00 3.18
488 489 0.804989 GTAGCAGCGCCTTTGTGAAT 59.195 50.000 2.29 0.00 0.00 2.57
489 490 1.200020 GTAGCAGCGCCTTTGTGAATT 59.800 47.619 2.29 0.00 0.00 2.17
490 491 0.675633 AGCAGCGCCTTTGTGAATTT 59.324 45.000 2.29 0.00 0.00 1.82
491 492 1.885887 AGCAGCGCCTTTGTGAATTTA 59.114 42.857 2.29 0.00 0.00 1.40
492 493 2.493278 AGCAGCGCCTTTGTGAATTTAT 59.507 40.909 2.29 0.00 0.00 1.40
493 494 3.694072 AGCAGCGCCTTTGTGAATTTATA 59.306 39.130 2.29 0.00 0.00 0.98
494 495 3.791353 GCAGCGCCTTTGTGAATTTATAC 59.209 43.478 2.29 0.00 0.00 1.47
495 496 4.674101 GCAGCGCCTTTGTGAATTTATACA 60.674 41.667 2.29 0.00 0.00 2.29
496 497 5.030295 CAGCGCCTTTGTGAATTTATACAG 58.970 41.667 2.29 0.00 0.00 2.74
497 498 4.096382 AGCGCCTTTGTGAATTTATACAGG 59.904 41.667 2.29 0.00 0.00 4.00
498 499 4.095782 GCGCCTTTGTGAATTTATACAGGA 59.904 41.667 0.00 0.00 0.00 3.86
499 500 5.221048 GCGCCTTTGTGAATTTATACAGGAT 60.221 40.000 0.00 0.00 0.00 3.24
500 501 6.680378 GCGCCTTTGTGAATTTATACAGGATT 60.680 38.462 0.00 0.00 0.00 3.01
501 502 6.692681 CGCCTTTGTGAATTTATACAGGATTG 59.307 38.462 3.71 0.00 0.00 2.67
502 503 7.547227 GCCTTTGTGAATTTATACAGGATTGT 58.453 34.615 3.71 0.00 41.39 2.71
503 504 7.702348 GCCTTTGTGAATTTATACAGGATTGTC 59.298 37.037 3.71 0.00 38.76 3.18
504 505 8.190784 CCTTTGTGAATTTATACAGGATTGTCC 58.809 37.037 0.00 0.00 38.76 4.02
505 506 7.639113 TTGTGAATTTATACAGGATTGTCCC 57.361 36.000 0.00 0.00 37.19 4.46
506 507 6.726379 TGTGAATTTATACAGGATTGTCCCA 58.274 36.000 0.00 0.00 37.19 4.37
507 508 7.353525 TGTGAATTTATACAGGATTGTCCCAT 58.646 34.615 0.00 0.00 37.19 4.00
508 509 7.838696 TGTGAATTTATACAGGATTGTCCCATT 59.161 33.333 0.00 0.00 37.19 3.16
509 510 8.695456 GTGAATTTATACAGGATTGTCCCATTT 58.305 33.333 0.00 0.00 37.19 2.32
510 511 9.928618 TGAATTTATACAGGATTGTCCCATTTA 57.071 29.630 0.00 0.00 37.19 1.40
516 517 6.544928 ACAGGATTGTCCCATTTAATTTCC 57.455 37.500 0.00 0.00 37.19 3.13
517 518 6.263754 ACAGGATTGTCCCATTTAATTTCCT 58.736 36.000 0.00 0.00 37.19 3.36
518 519 6.730507 ACAGGATTGTCCCATTTAATTTCCTT 59.269 34.615 0.00 0.00 37.19 3.36
519 520 7.237471 ACAGGATTGTCCCATTTAATTTCCTTT 59.763 33.333 0.00 0.00 37.19 3.11
520 521 7.550196 CAGGATTGTCCCATTTAATTTCCTTTG 59.450 37.037 0.00 0.00 37.19 2.77
521 522 7.237471 AGGATTGTCCCATTTAATTTCCTTTGT 59.763 33.333 0.00 0.00 37.19 2.83
522 523 8.536175 GGATTGTCCCATTTAATTTCCTTTGTA 58.464 33.333 0.00 0.00 0.00 2.41
523 524 9.936759 GATTGTCCCATTTAATTTCCTTTGTAA 57.063 29.630 0.00 0.00 0.00 2.41
533 534 9.589111 TTTAATTTCCTTTGTAAAATATCCCGC 57.411 29.630 0.00 0.00 0.00 6.13
534 535 6.783708 ATTTCCTTTGTAAAATATCCCGCA 57.216 33.333 0.00 0.00 0.00 5.69
535 536 6.591750 TTTCCTTTGTAAAATATCCCGCAA 57.408 33.333 0.00 0.00 0.00 4.85
536 537 6.591750 TTCCTTTGTAAAATATCCCGCAAA 57.408 33.333 0.00 0.00 0.00 3.68
537 538 6.591750 TCCTTTGTAAAATATCCCGCAAAA 57.408 33.333 0.00 0.00 0.00 2.44
538 539 6.994221 TCCTTTGTAAAATATCCCGCAAAAA 58.006 32.000 0.00 0.00 0.00 1.94
570 571 8.841300 CCTTTATAAAATACTCCCTTTCTCAGC 58.159 37.037 0.00 0.00 0.00 4.26
571 572 9.396022 CTTTATAAAATACTCCCTTTCTCAGCA 57.604 33.333 0.00 0.00 0.00 4.41
572 573 8.964476 TTATAAAATACTCCCTTTCTCAGCAG 57.036 34.615 0.00 0.00 0.00 4.24
573 574 4.917906 AAATACTCCCTTTCTCAGCAGT 57.082 40.909 0.00 0.00 0.00 4.40
574 575 3.902881 ATACTCCCTTTCTCAGCAGTG 57.097 47.619 0.00 0.00 0.00 3.66
575 576 0.036022 ACTCCCTTTCTCAGCAGTGC 59.964 55.000 7.13 7.13 0.00 4.40
576 577 0.324285 CTCCCTTTCTCAGCAGTGCT 59.676 55.000 13.14 13.14 40.77 4.40
577 578 0.767375 TCCCTTTCTCAGCAGTGCTT 59.233 50.000 16.89 0.00 36.40 3.91
578 579 1.977854 TCCCTTTCTCAGCAGTGCTTA 59.022 47.619 16.89 6.91 36.40 3.09
579 580 2.573462 TCCCTTTCTCAGCAGTGCTTAT 59.427 45.455 16.89 0.00 36.40 1.73
580 581 3.774766 TCCCTTTCTCAGCAGTGCTTATA 59.225 43.478 16.89 2.96 36.40 0.98
581 582 3.873952 CCCTTTCTCAGCAGTGCTTATAC 59.126 47.826 16.89 0.00 36.40 1.47
582 583 4.383552 CCCTTTCTCAGCAGTGCTTATACT 60.384 45.833 16.89 0.00 36.40 2.12
583 584 4.808364 CCTTTCTCAGCAGTGCTTATACTC 59.192 45.833 16.89 0.00 36.40 2.59
584 585 5.395103 CCTTTCTCAGCAGTGCTTATACTCT 60.395 44.000 16.89 0.00 36.40 3.24
585 586 4.909696 TCTCAGCAGTGCTTATACTCTC 57.090 45.455 16.89 0.00 36.40 3.20
586 587 3.313803 TCTCAGCAGTGCTTATACTCTCG 59.686 47.826 16.89 0.35 36.40 4.04
587 588 2.359214 TCAGCAGTGCTTATACTCTCGG 59.641 50.000 16.89 0.00 36.40 4.63
588 589 2.359214 CAGCAGTGCTTATACTCTCGGA 59.641 50.000 16.89 0.00 36.40 4.55
589 590 3.024547 AGCAGTGCTTATACTCTCGGAA 58.975 45.455 13.14 0.00 33.89 4.30
590 591 3.447586 AGCAGTGCTTATACTCTCGGAAA 59.552 43.478 13.14 0.00 33.89 3.13
591 592 4.081642 AGCAGTGCTTATACTCTCGGAAAA 60.082 41.667 13.14 0.00 33.89 2.29
592 593 4.630069 GCAGTGCTTATACTCTCGGAAAAA 59.370 41.667 8.18 0.00 0.00 1.94
635 638 0.100861 CTCCCTTCTCGTAGCCGTTC 59.899 60.000 0.00 0.00 35.01 3.95
640 643 2.666994 CCTTCTCGTAGCCGTTCTTTTC 59.333 50.000 0.00 0.00 35.01 2.29
1245 1434 5.446143 TGGAGTATTGCGATGTTTTTGTT 57.554 34.783 0.00 0.00 0.00 2.83
1282 1471 0.320771 ATCCTTGAAACGTCTGCGCT 60.321 50.000 9.73 0.00 42.83 5.92
1350 1539 2.296471 ACCAAGTCTCGTTTCACTCGAT 59.704 45.455 0.00 0.00 36.73 3.59
1428 1617 1.021968 GAGCCGTTGTTGAACTTGGT 58.978 50.000 0.00 0.00 0.00 3.67
1584 1808 4.023707 AGCATCTTTCTCAAAGGTTTGTCG 60.024 41.667 2.49 0.00 39.01 4.35
1742 2061 8.768019 CACAGTTACATTCCATATGACATACTG 58.232 37.037 3.65 10.10 35.48 2.74
1746 2065 5.065914 ACATTCCATATGACATACTGCACC 58.934 41.667 3.65 0.00 0.00 5.01
1752 2071 3.650281 ATGACATACTGCACCCATCAA 57.350 42.857 0.00 0.00 0.00 2.57
1772 2092 5.820131 TCAACAGATTGCACTTTGTACTTG 58.180 37.500 0.47 0.00 35.63 3.16
1785 2105 7.918562 GCACTTTGTACTTGAAAGGTCAAAATA 59.081 33.333 8.53 0.00 43.18 1.40
2175 2512 3.186001 CAGATGTGCAGAAATCGATAGCC 59.814 47.826 0.00 0.00 0.00 3.93
2295 2652 6.317391 GGCACTCTTCATGCTACTATTTCTTT 59.683 38.462 0.00 0.00 42.93 2.52
2296 2653 7.148171 GGCACTCTTCATGCTACTATTTCTTTT 60.148 37.037 0.00 0.00 42.93 2.27
2364 2726 6.588719 TCCCAAACTAAATGGAAGAATGTG 57.411 37.500 0.00 0.00 40.56 3.21
2392 2948 9.941325 TTGTTAAATAATTGCATGTTTCTGGAT 57.059 25.926 0.00 0.00 0.00 3.41
2475 3309 5.085636 TGAACTACGTTGTATGCACAAAC 57.914 39.130 2.37 0.00 45.99 2.93
2476 3310 4.812091 TGAACTACGTTGTATGCACAAACT 59.188 37.500 2.37 0.00 45.99 2.66
2477 3311 5.984323 TGAACTACGTTGTATGCACAAACTA 59.016 36.000 2.37 0.00 45.99 2.24
2478 3312 5.834239 ACTACGTTGTATGCACAAACTAC 57.166 39.130 0.00 0.00 45.99 2.73
2479 3313 5.535333 ACTACGTTGTATGCACAAACTACT 58.465 37.500 0.00 0.00 45.99 2.57
2480 3314 4.985044 ACGTTGTATGCACAAACTACTC 57.015 40.909 0.00 0.00 45.99 2.59
2481 3315 3.744426 ACGTTGTATGCACAAACTACTCC 59.256 43.478 0.00 0.00 45.99 3.85
2482 3316 3.124636 CGTTGTATGCACAAACTACTCCC 59.875 47.826 0.00 0.00 45.99 4.30
2483 3317 4.324267 GTTGTATGCACAAACTACTCCCT 58.676 43.478 0.00 0.00 45.99 4.20
2484 3318 4.202245 TGTATGCACAAACTACTCCCTC 57.798 45.455 0.00 0.00 0.00 4.30
2485 3319 2.789409 ATGCACAAACTACTCCCTCC 57.211 50.000 0.00 0.00 0.00 4.30
2486 3320 0.320374 TGCACAAACTACTCCCTCCG 59.680 55.000 0.00 0.00 0.00 4.63
2487 3321 0.320697 GCACAAACTACTCCCTCCGT 59.679 55.000 0.00 0.00 0.00 4.69
2488 3322 1.672145 GCACAAACTACTCCCTCCGTC 60.672 57.143 0.00 0.00 0.00 4.79
2489 3323 1.893801 CACAAACTACTCCCTCCGTCT 59.106 52.381 0.00 0.00 0.00 4.18
2490 3324 2.094649 CACAAACTACTCCCTCCGTCTC 60.095 54.545 0.00 0.00 0.00 3.36
2491 3325 2.168496 CAAACTACTCCCTCCGTCTCA 58.832 52.381 0.00 0.00 0.00 3.27
2492 3326 2.561419 CAAACTACTCCCTCCGTCTCAA 59.439 50.000 0.00 0.00 0.00 3.02
2493 3327 2.599408 ACTACTCCCTCCGTCTCAAA 57.401 50.000 0.00 0.00 0.00 2.69
2494 3328 2.885616 ACTACTCCCTCCGTCTCAAAA 58.114 47.619 0.00 0.00 0.00 2.44
2495 3329 3.442076 ACTACTCCCTCCGTCTCAAAAT 58.558 45.455 0.00 0.00 0.00 1.82
2496 3330 3.838903 ACTACTCCCTCCGTCTCAAAATT 59.161 43.478 0.00 0.00 0.00 1.82
2497 3331 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
2498 3332 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
2499 3333 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
2500 3334 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
2501 3335 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
2502 3336 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
2503 3337 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
2504 3338 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
2505 3339 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
2506 3340 6.091441 CCTCCGTCTCAAAATTCTTGTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
2507 3341 6.522054 TCCGTCTCAAAATTCTTGTCTTAGT 58.478 36.000 0.00 0.00 0.00 2.24
2508 3342 6.990349 TCCGTCTCAAAATTCTTGTCTTAGTT 59.010 34.615 0.00 0.00 0.00 2.24
2509 3343 7.497909 TCCGTCTCAAAATTCTTGTCTTAGTTT 59.502 33.333 0.00 0.00 0.00 2.66
2510 3344 8.770828 CCGTCTCAAAATTCTTGTCTTAGTTTA 58.229 33.333 0.00 0.00 0.00 2.01
2511 3345 9.798885 CGTCTCAAAATTCTTGTCTTAGTTTAG 57.201 33.333 0.00 0.00 0.00 1.85
2522 3356 9.107177 TCTTGTCTTAGTTTAGTCTAGATACGG 57.893 37.037 0.00 0.00 0.00 4.02
2523 3357 9.107177 CTTGTCTTAGTTTAGTCTAGATACGGA 57.893 37.037 0.00 0.00 0.00 4.69
2524 3358 9.624373 TTGTCTTAGTTTAGTCTAGATACGGAT 57.376 33.333 0.00 0.00 0.00 4.18
2525 3359 9.053840 TGTCTTAGTTTAGTCTAGATACGGATG 57.946 37.037 0.00 0.00 0.00 3.51
2526 3360 9.054922 GTCTTAGTTTAGTCTAGATACGGATGT 57.945 37.037 0.00 0.00 0.00 3.06
2559 3393 7.915293 TTAAAACATGACTTGATACATCCGT 57.085 32.000 0.00 0.00 0.00 4.69
2560 3394 9.607988 ATTAAAACATGACTTGATACATCCGTA 57.392 29.630 0.00 0.00 0.00 4.02
2561 3395 9.607988 TTAAAACATGACTTGATACATCCGTAT 57.392 29.630 0.00 0.00 41.16 3.06
2562 3396 8.506168 AAAACATGACTTGATACATCCGTATT 57.494 30.769 0.00 0.00 38.48 1.89
2563 3397 8.506168 AAACATGACTTGATACATCCGTATTT 57.494 30.769 0.00 0.00 38.48 1.40
2564 3398 9.607988 AAACATGACTTGATACATCCGTATTTA 57.392 29.630 0.00 0.00 38.48 1.40
2565 3399 8.818141 ACATGACTTGATACATCCGTATTTAG 57.182 34.615 0.00 0.00 38.48 1.85
2566 3400 8.638873 ACATGACTTGATACATCCGTATTTAGA 58.361 33.333 0.00 0.00 38.48 2.10
2567 3401 8.916654 CATGACTTGATACATCCGTATTTAGAC 58.083 37.037 0.00 0.00 38.48 2.59
2568 3402 8.002984 TGACTTGATACATCCGTATTTAGACA 57.997 34.615 0.00 0.00 38.48 3.41
2569 3403 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
2570 3404 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
2571 3405 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
2574 3408 9.825109 TGATACATCCGTATTTAGACAAATTCA 57.175 29.630 0.00 0.00 38.48 2.57
2577 3411 8.786826 ACATCCGTATTTAGACAAATTCAAGA 57.213 30.769 0.00 0.00 35.88 3.02
2578 3412 8.665685 ACATCCGTATTTAGACAAATTCAAGAC 58.334 33.333 0.00 0.00 35.88 3.01
2579 3413 8.664798 CATCCGTATTTAGACAAATTCAAGACA 58.335 33.333 0.00 0.00 35.88 3.41
2580 3414 8.610248 TCCGTATTTAGACAAATTCAAGACAA 57.390 30.769 0.00 0.00 35.88 3.18
2581 3415 8.717821 TCCGTATTTAGACAAATTCAAGACAAG 58.282 33.333 0.00 0.00 35.88 3.16
2582 3416 8.717821 CCGTATTTAGACAAATTCAAGACAAGA 58.282 33.333 0.00 0.00 35.88 3.02
2593 3427 4.829064 TCAAGACAAGAATTTTGGGACG 57.171 40.909 5.68 0.00 0.00 4.79
2594 3428 3.568007 TCAAGACAAGAATTTTGGGACGG 59.432 43.478 0.00 0.00 0.00 4.79
2595 3429 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2596 3430 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2597 3431 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2598 3432 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2599 3433 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2600 3434 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2612 3446 4.892345 GGACGGAGGGAGTATTTAGTAACT 59.108 45.833 0.00 0.00 0.00 2.24
2620 3454 9.747293 GAGGGAGTATTTAGTAACTGTTATGTC 57.253 37.037 3.23 0.00 0.00 3.06
2630 3464 7.228314 AGTAACTGTTATGTCTCAAGCAGTA 57.772 36.000 3.23 0.00 36.34 2.74
2640 3474 3.495001 GTCTCAAGCAGTACCAAGTTGAC 59.505 47.826 3.87 0.00 0.00 3.18
2641 3475 3.133901 TCTCAAGCAGTACCAAGTTGACA 59.866 43.478 3.87 0.00 0.00 3.58
2665 3501 7.705325 ACAATGTATCGGAATTATATAGCGGTC 59.295 37.037 0.00 0.00 0.00 4.79
2673 3509 6.346598 CGGAATTATATAGCGGTCACAGTTTG 60.347 42.308 0.00 0.00 0.00 2.93
2706 3543 6.436027 TGCAAATAAATGGTCCCCAATACTA 58.564 36.000 0.00 0.00 36.95 1.82
2772 3738 8.932945 TGTGACTATCTTGCTCTTGTTATAAG 57.067 34.615 0.00 0.00 0.00 1.73
2991 3966 3.126343 GGTAAATTTAGCCACACCTCACG 59.874 47.826 15.09 0.00 0.00 4.35
3006 3981 7.331934 CCACACCTCACGATATTTGGATATAAG 59.668 40.741 0.00 0.00 0.00 1.73
3031 4008 3.060602 GTGTGTTACAAGTGAGGCTCTC 58.939 50.000 16.72 12.49 0.00 3.20
3366 4390 5.332506 CGCTTGCACTTTTTAAATGTCTTGG 60.333 40.000 0.00 0.00 0.00 3.61
3420 4463 6.223852 ACGACATCTTACAATCTCTGTTGTT 58.776 36.000 0.00 0.00 42.08 2.83
3624 4798 1.353022 TCCCTCAACCGCAAACCTAAT 59.647 47.619 0.00 0.00 0.00 1.73
3783 4960 8.096414 CCATGTTCTTATGGTTTTCTTGGAATT 58.904 33.333 0.00 0.00 42.16 2.17
3909 5332 4.039488 ACAAATCATGCACAGGTGATTGTT 59.961 37.500 12.73 2.42 42.52 2.83
3910 5333 3.861276 ATCATGCACAGGTGATTGTTG 57.139 42.857 3.10 0.00 31.26 3.33
3930 5353 2.813754 TGGATTCAGCAGCACTACAAAC 59.186 45.455 0.00 0.00 0.00 2.93
3931 5354 2.813754 GGATTCAGCAGCACTACAAACA 59.186 45.455 0.00 0.00 0.00 2.83
3932 5355 3.120060 GGATTCAGCAGCACTACAAACAG 60.120 47.826 0.00 0.00 0.00 3.16
3933 5356 1.882912 TCAGCAGCACTACAAACAGG 58.117 50.000 0.00 0.00 0.00 4.00
3934 5357 1.140852 TCAGCAGCACTACAAACAGGT 59.859 47.619 0.00 0.00 0.00 4.00
3935 5358 1.265095 CAGCAGCACTACAAACAGGTG 59.735 52.381 0.00 0.00 0.00 4.00
3950 5377 3.679389 ACAGGTGATTGCTACCTTTCTG 58.321 45.455 0.00 0.00 46.13 3.02
4006 5434 0.744281 AAAACAGGCCAAGGAACACG 59.256 50.000 5.01 0.00 0.00 4.49
4012 5440 0.535553 GGCCAAGGAACACGTTACCA 60.536 55.000 0.00 0.00 0.00 3.25
4024 5452 3.003275 ACACGTTACCAGCAGTCAAAATG 59.997 43.478 0.00 0.00 0.00 2.32
4080 5512 6.071616 GCTAGATAAGAGGGATGTACTGGAAG 60.072 46.154 0.00 0.00 42.29 3.46
4226 5711 4.162690 GTGCTGGGGCCCTACGAG 62.163 72.222 25.93 14.05 37.74 4.18
4248 5733 1.346722 AGAGGTCAACCACGTTAAGGG 59.653 52.381 1.33 0.00 38.89 3.95
4255 5740 3.148340 CCACGTTAAGGGGTACTGC 57.852 57.895 0.00 0.00 39.08 4.40
4295 5802 3.691342 CCCAAGCCCTCGTCGTCA 61.691 66.667 0.00 0.00 0.00 4.35
4330 5839 2.640316 ATCGTTCCAAAGCCCTATCC 57.360 50.000 0.00 0.00 0.00 2.59
4331 5840 0.544697 TCGTTCCAAAGCCCTATCCC 59.455 55.000 0.00 0.00 0.00 3.85
4332 5841 0.254747 CGTTCCAAAGCCCTATCCCA 59.745 55.000 0.00 0.00 0.00 4.37
4547 7159 2.668632 TGGCTAAGGGCAACTCCG 59.331 61.111 0.00 0.00 45.10 4.63
4578 7190 5.751586 TCACTAAATCACCCCTAAATGTCC 58.248 41.667 0.00 0.00 0.00 4.02
4597 7209 1.226603 GGATCGGACAGTTCGGTCG 60.227 63.158 8.47 0.00 38.51 4.79
4608 7220 3.001939 ACAGTTCGGTCGTTTTTGACATC 59.998 43.478 0.00 0.00 40.72 3.06
4643 7257 4.700213 ACCAAATTTATTCGGACTGGTCTG 59.300 41.667 3.36 3.36 37.32 3.51
4646 7260 5.373812 AATTTATTCGGACTGGTCTGGAT 57.626 39.130 8.25 8.25 37.85 3.41
4676 7290 4.886247 TTCCACAAACCAGAACTAAACG 57.114 40.909 0.00 0.00 0.00 3.60
4712 7378 3.311110 GTCTGGACCTCCGCCACA 61.311 66.667 0.00 0.00 39.43 4.17
4826 7618 3.055458 TCAAAGCAGACGATGGGATGTTA 60.055 43.478 0.00 0.00 0.00 2.41
4827 7619 3.845781 AAGCAGACGATGGGATGTTAT 57.154 42.857 0.00 0.00 0.00 1.89
4939 7991 0.036306 ATGGGAAAGTCGAACGGCTT 59.964 50.000 8.25 8.25 42.43 4.35
5106 8254 2.110213 AAGGAGTTCGTGCGGCAA 59.890 55.556 3.23 0.00 0.00 4.52
5131 8282 1.153329 TTGTTGTTGGAGCGGTCGT 60.153 52.632 8.77 0.00 0.00 4.34
5169 8320 1.814527 GTCACTATCCCCGTCGCTT 59.185 57.895 0.00 0.00 0.00 4.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.570638 CATTGCAGCTCCGGCGAG 61.571 66.667 9.30 5.11 44.37 5.03
44 45 3.207669 CTCCATTGCAGCTCCGGC 61.208 66.667 0.00 0.00 39.06 6.13
45 46 3.207669 GCTCCATTGCAGCTCCGG 61.208 66.667 0.00 0.00 33.75 5.14
46 47 3.570638 CGCTCCATTGCAGCTCCG 61.571 66.667 0.00 0.00 34.45 4.63
47 48 3.885521 GCGCTCCATTGCAGCTCC 61.886 66.667 0.00 0.00 34.45 4.70
48 49 2.404995 AAGCGCTCCATTGCAGCTC 61.405 57.895 12.06 0.00 40.05 4.09
49 50 2.360852 AAGCGCTCCATTGCAGCT 60.361 55.556 12.06 0.00 41.62 4.24
50 51 2.202570 CAAGCGCTCCATTGCAGC 60.203 61.111 12.06 0.00 34.52 5.25
51 52 1.136147 GACAAGCGCTCCATTGCAG 59.864 57.895 12.06 0.00 0.00 4.41
52 53 2.679934 CGACAAGCGCTCCATTGCA 61.680 57.895 12.06 0.00 0.00 4.08
53 54 2.099062 CGACAAGCGCTCCATTGC 59.901 61.111 12.06 0.72 0.00 3.56
54 55 1.741401 TCCGACAAGCGCTCCATTG 60.741 57.895 12.06 8.04 39.11 2.82
55 56 1.741770 GTCCGACAAGCGCTCCATT 60.742 57.895 12.06 0.00 39.11 3.16
56 57 2.125512 GTCCGACAAGCGCTCCAT 60.126 61.111 12.06 0.00 39.11 3.41
57 58 4.717629 CGTCCGACAAGCGCTCCA 62.718 66.667 12.06 0.00 39.11 3.86
63 64 2.707849 TAGGGAGCGTCCGACAAGC 61.708 63.158 0.00 0.00 37.43 4.01
64 65 1.139095 GTAGGGAGCGTCCGACAAG 59.861 63.158 0.00 0.00 37.43 3.16
65 66 2.345760 GGTAGGGAGCGTCCGACAA 61.346 63.158 11.99 0.00 37.43 3.18
66 67 2.753043 GGTAGGGAGCGTCCGACA 60.753 66.667 11.99 0.00 37.43 4.35
67 68 3.885521 CGGTAGGGAGCGTCCGAC 61.886 72.222 0.00 3.73 44.86 4.79
70 71 1.111715 AATACCGGTAGGGAGCGTCC 61.112 60.000 20.91 0.00 45.10 4.79
71 72 0.031721 CAATACCGGTAGGGAGCGTC 59.968 60.000 20.91 0.00 45.10 5.19
72 73 2.024590 GCAATACCGGTAGGGAGCGT 62.025 60.000 20.91 0.00 45.10 5.07
73 74 1.300697 GCAATACCGGTAGGGAGCG 60.301 63.158 20.91 5.52 46.13 5.03
74 75 0.179468 TTGCAATACCGGTAGGGAGC 59.821 55.000 20.91 19.22 43.47 4.70
75 76 2.494059 CATTGCAATACCGGTAGGGAG 58.506 52.381 20.91 10.33 43.47 4.30
76 77 1.142060 CCATTGCAATACCGGTAGGGA 59.858 52.381 20.91 12.99 43.47 4.20
77 78 1.133915 ACCATTGCAATACCGGTAGGG 60.134 52.381 20.91 14.97 43.47 3.53
78 79 1.946768 CACCATTGCAATACCGGTAGG 59.053 52.381 20.91 15.53 45.13 3.18
90 91 4.505217 CGACGAGCGCACCATTGC 62.505 66.667 11.47 0.00 46.21 3.56
115 116 3.814268 CCATTGCAACGCCGGGAG 61.814 66.667 0.00 0.00 0.00 4.30
116 117 4.337177 TCCATTGCAACGCCGGGA 62.337 61.111 0.00 1.15 0.00 5.14
117 118 3.814268 CTCCATTGCAACGCCGGG 61.814 66.667 0.00 0.00 0.00 5.73
118 119 4.481112 GCTCCATTGCAACGCCGG 62.481 66.667 0.00 0.00 0.00 6.13
119 120 3.736100 TGCTCCATTGCAACGCCG 61.736 61.111 0.00 0.00 40.29 6.46
120 121 2.126346 GTGCTCCATTGCAACGCC 60.126 61.111 0.00 0.00 45.12 5.68
121 122 1.154150 GAGTGCTCCATTGCAACGC 60.154 57.895 0.00 2.94 45.12 4.84
122 123 1.133253 CGAGTGCTCCATTGCAACG 59.867 57.895 0.00 0.00 45.12 4.10
123 124 1.154150 GCGAGTGCTCCATTGCAAC 60.154 57.895 0.00 0.00 45.12 4.17
124 125 2.334946 GGCGAGTGCTCCATTGCAA 61.335 57.895 0.00 0.00 45.12 4.08
125 126 2.747460 GGCGAGTGCTCCATTGCA 60.747 61.111 0.00 0.00 42.25 4.08
126 127 3.869272 CGGCGAGTGCTCCATTGC 61.869 66.667 0.00 0.00 42.25 3.56
127 128 3.197790 CCGGCGAGTGCTCCATTG 61.198 66.667 9.30 0.00 42.25 2.82
143 144 3.885521 GAGCTCCAATGCAGCGCC 61.886 66.667 2.29 0.00 42.14 6.53
144 145 2.823147 AGAGCTCCAATGCAGCGC 60.823 61.111 10.93 0.00 42.14 5.92
145 146 1.703438 GACAGAGCTCCAATGCAGCG 61.703 60.000 10.93 0.00 42.14 5.18
146 147 1.375098 GGACAGAGCTCCAATGCAGC 61.375 60.000 10.93 0.00 37.12 5.25
147 148 1.088340 CGGACAGAGCTCCAATGCAG 61.088 60.000 10.93 0.00 34.99 4.41
148 149 1.078918 CGGACAGAGCTCCAATGCA 60.079 57.895 10.93 0.00 34.99 3.96
149 150 1.817099 CCGGACAGAGCTCCAATGC 60.817 63.158 10.93 0.13 0.00 3.56
150 151 0.742281 CACCGGACAGAGCTCCAATG 60.742 60.000 9.46 4.87 0.00 2.82
151 152 1.599047 CACCGGACAGAGCTCCAAT 59.401 57.895 9.46 0.00 0.00 3.16
152 153 2.583441 CCACCGGACAGAGCTCCAA 61.583 63.158 9.46 0.00 0.00 3.53
153 154 2.997315 CCACCGGACAGAGCTCCA 60.997 66.667 9.46 0.00 0.00 3.86
154 155 2.997897 ACCACCGGACAGAGCTCC 60.998 66.667 9.46 0.00 0.00 4.70
155 156 1.939769 GAGACCACCGGACAGAGCTC 61.940 65.000 9.46 5.27 0.00 4.09
156 157 1.979693 GAGACCACCGGACAGAGCT 60.980 63.158 9.46 0.00 0.00 4.09
157 158 2.574399 GAGACCACCGGACAGAGC 59.426 66.667 9.46 0.00 0.00 4.09
158 159 1.241990 TTCGAGACCACCGGACAGAG 61.242 60.000 9.46 0.00 0.00 3.35
159 160 1.228337 TTCGAGACCACCGGACAGA 60.228 57.895 9.46 0.00 0.00 3.41
160 161 1.213013 CTTCGAGACCACCGGACAG 59.787 63.158 9.46 0.00 0.00 3.51
161 162 2.927580 GCTTCGAGACCACCGGACA 61.928 63.158 9.46 0.00 0.00 4.02
162 163 2.126031 GCTTCGAGACCACCGGAC 60.126 66.667 9.46 0.00 0.00 4.79
163 164 2.282958 AGCTTCGAGACCACCGGA 60.283 61.111 9.46 0.00 0.00 5.14
164 165 2.125912 CAGCTTCGAGACCACCGG 60.126 66.667 0.00 0.00 0.00 5.28
165 166 2.811317 GCAGCTTCGAGACCACCG 60.811 66.667 0.00 0.00 0.00 4.94
166 167 2.564553 ATCGCAGCTTCGAGACCACC 62.565 60.000 14.87 0.00 42.14 4.61
167 168 1.153745 ATCGCAGCTTCGAGACCAC 60.154 57.895 14.87 0.00 42.14 4.16
168 169 1.153765 CATCGCAGCTTCGAGACCA 60.154 57.895 14.87 0.00 42.14 4.02
169 170 2.520904 GCATCGCAGCTTCGAGACC 61.521 63.158 14.87 1.20 42.14 3.85
170 171 1.807165 TGCATCGCAGCTTCGAGAC 60.807 57.895 14.87 9.05 42.14 3.36
171 172 1.807165 GTGCATCGCAGCTTCGAGA 60.807 57.895 14.87 0.00 40.08 4.04
172 173 2.699809 GTGCATCGCAGCTTCGAG 59.300 61.111 14.87 7.62 40.08 4.04
190 191 3.570638 CCATTGCTGCGCCGAGAG 61.571 66.667 4.18 0.00 0.00 3.20
191 192 4.081185 TCCATTGCTGCGCCGAGA 62.081 61.111 4.18 0.00 0.00 4.04
192 193 3.570638 CTCCATTGCTGCGCCGAG 61.571 66.667 4.18 0.00 0.00 4.63
198 199 4.233635 CGAGCGCTCCATTGCTGC 62.234 66.667 30.66 4.24 42.60 5.25
199 200 4.233635 GCGAGCGCTCCATTGCTG 62.234 66.667 30.66 16.09 42.60 4.41
211 212 3.660111 AAAGCAACACCGGCGAGC 61.660 61.111 9.30 1.93 36.08 5.03
212 213 2.252260 CAAAGCAACACCGGCGAG 59.748 61.111 9.30 2.48 36.08 5.03
213 214 3.959975 GCAAAGCAACACCGGCGA 61.960 61.111 9.30 0.00 36.08 5.54
214 215 4.263209 TGCAAAGCAACACCGGCG 62.263 61.111 0.00 0.00 34.76 6.46
215 216 2.355009 CTGCAAAGCAACACCGGC 60.355 61.111 0.00 0.00 38.41 6.13
216 217 2.355009 GCTGCAAAGCAACACCGG 60.355 61.111 0.00 0.00 38.41 5.28
217 218 2.412525 TGCTGCAAAGCAACACCG 59.587 55.556 0.00 0.00 42.40 4.94
224 225 2.202570 CGCTGGATGCTGCAAAGC 60.203 61.111 19.42 19.42 40.11 3.51
225 226 1.989966 CTCCGCTGGATGCTGCAAAG 61.990 60.000 15.95 6.21 40.11 2.77
226 227 2.033911 TCCGCTGGATGCTGCAAA 59.966 55.556 15.95 0.46 40.11 3.68
227 228 2.437180 CTCCGCTGGATGCTGCAA 60.437 61.111 15.95 2.87 40.11 4.08
228 229 4.478371 CCTCCGCTGGATGCTGCA 62.478 66.667 15.95 4.13 40.11 4.41
229 230 4.166888 TCCTCCGCTGGATGCTGC 62.167 66.667 6.00 6.00 40.11 5.25
230 231 2.202987 GTCCTCCGCTGGATGCTG 60.203 66.667 0.00 0.00 38.52 4.41
231 232 3.842923 CGTCCTCCGCTGGATGCT 61.843 66.667 0.00 0.00 38.52 3.79
240 241 1.429825 CAGTAGACTGCGTCCTCCG 59.570 63.158 0.00 0.00 37.15 4.63
249 250 2.656646 TGCCGGTGCAGTAGACTG 59.343 61.111 1.90 5.26 44.23 3.51
258 259 4.740431 GCCATTGGTTGCCGGTGC 62.740 66.667 1.90 0.00 38.26 5.01
259 260 3.301554 TGCCATTGGTTGCCGGTG 61.302 61.111 1.90 0.00 0.00 4.94
260 261 3.302344 GTGCCATTGGTTGCCGGT 61.302 61.111 1.90 0.00 0.00 5.28
261 262 4.067913 GGTGCCATTGGTTGCCGG 62.068 66.667 4.26 0.00 0.00 6.13
262 263 3.285523 CTGGTGCCATTGGTTGCCG 62.286 63.158 4.26 0.00 0.00 5.69
263 264 2.658422 CTGGTGCCATTGGTTGCC 59.342 61.111 4.26 5.12 0.00 4.52
264 265 2.047939 GCTGGTGCCATTGGTTGC 60.048 61.111 4.26 0.00 0.00 4.17
265 266 2.259204 CGCTGGTGCCATTGGTTG 59.741 61.111 4.26 0.00 35.36 3.77
266 267 2.762969 TAGCGCTGGTGCCATTGGTT 62.763 55.000 22.90 0.00 35.36 3.67
267 268 3.266686 TAGCGCTGGTGCCATTGGT 62.267 57.895 22.90 0.00 35.36 3.67
268 269 2.438254 TAGCGCTGGTGCCATTGG 60.438 61.111 22.90 0.00 35.36 3.16
269 270 2.764314 GGTAGCGCTGGTGCCATTG 61.764 63.158 22.90 0.00 35.92 2.82
270 271 2.438434 GGTAGCGCTGGTGCCATT 60.438 61.111 22.90 0.00 35.92 3.16
271 272 4.838152 CGGTAGCGCTGGTGCCAT 62.838 66.667 22.90 0.00 35.61 4.40
282 283 1.835483 CTGATTGCATCGCCGGTAGC 61.835 60.000 1.90 2.71 38.52 3.58
283 284 1.224069 CCTGATTGCATCGCCGGTAG 61.224 60.000 1.90 0.00 0.00 3.18
284 285 1.227527 CCTGATTGCATCGCCGGTA 60.228 57.895 1.90 0.00 0.00 4.02
285 286 2.514592 CCTGATTGCATCGCCGGT 60.515 61.111 1.90 0.00 0.00 5.28
286 287 3.282157 CCCTGATTGCATCGCCGG 61.282 66.667 0.00 0.00 0.00 6.13
287 288 3.957535 GCCCTGATTGCATCGCCG 61.958 66.667 0.00 0.00 0.00 6.46
288 289 2.345880 CTTGCCCTGATTGCATCGCC 62.346 60.000 0.00 0.00 38.76 5.54
289 290 1.065273 CTTGCCCTGATTGCATCGC 59.935 57.895 0.00 0.00 38.76 4.58
290 291 1.065273 GCTTGCCCTGATTGCATCG 59.935 57.895 0.00 0.00 38.76 3.84
291 292 1.065273 CGCTTGCCCTGATTGCATC 59.935 57.895 0.00 0.00 38.76 3.91
292 293 2.420568 CCGCTTGCCCTGATTGCAT 61.421 57.895 0.00 0.00 38.76 3.96
293 294 3.063704 CCGCTTGCCCTGATTGCA 61.064 61.111 0.00 0.00 36.84 4.08
294 295 3.830192 CCCGCTTGCCCTGATTGC 61.830 66.667 0.00 0.00 0.00 3.56
295 296 2.361610 ACCCGCTTGCCCTGATTG 60.362 61.111 0.00 0.00 0.00 2.67
296 297 2.361610 CACCCGCTTGCCCTGATT 60.362 61.111 0.00 0.00 0.00 2.57
297 298 4.431131 CCACCCGCTTGCCCTGAT 62.431 66.667 0.00 0.00 0.00 2.90
311 312 3.234630 TATATCAGCGGCCGGCCAC 62.235 63.158 42.78 35.20 45.17 5.01
312 313 2.920384 TATATCAGCGGCCGGCCA 60.920 61.111 42.78 26.05 45.17 5.36
313 314 2.125512 CTATATCAGCGGCCGGCC 60.126 66.667 36.69 36.69 45.17 6.13
314 315 0.737715 CTTCTATATCAGCGGCCGGC 60.738 60.000 29.38 21.18 44.05 6.13
315 316 0.888619 TCTTCTATATCAGCGGCCGG 59.111 55.000 29.38 11.74 0.00 6.13
316 317 1.813178 TCTCTTCTATATCAGCGGCCG 59.187 52.381 24.05 24.05 0.00 6.13
317 318 3.085533 TCTCTCTTCTATATCAGCGGCC 58.914 50.000 0.00 0.00 0.00 6.13
318 319 4.006989 TCTCTCTCTTCTATATCAGCGGC 58.993 47.826 0.00 0.00 0.00 6.53
319 320 5.879777 TCATCTCTCTCTTCTATATCAGCGG 59.120 44.000 0.00 0.00 0.00 5.52
320 321 6.983474 TCATCTCTCTCTTCTATATCAGCG 57.017 41.667 0.00 0.00 0.00 5.18
321 322 7.201848 CCCATCATCTCTCTCTTCTATATCAGC 60.202 44.444 0.00 0.00 0.00 4.26
322 323 8.054572 TCCCATCATCTCTCTCTTCTATATCAG 58.945 40.741 0.00 0.00 0.00 2.90
323 324 7.937591 TCCCATCATCTCTCTCTTCTATATCA 58.062 38.462 0.00 0.00 0.00 2.15
324 325 7.503566 CCTCCCATCATCTCTCTCTTCTATATC 59.496 44.444 0.00 0.00 0.00 1.63
325 326 7.356680 CCTCCCATCATCTCTCTCTTCTATAT 58.643 42.308 0.00 0.00 0.00 0.86
326 327 6.297536 CCCTCCCATCATCTCTCTCTTCTATA 60.298 46.154 0.00 0.00 0.00 1.31
327 328 5.518904 CCCTCCCATCATCTCTCTCTTCTAT 60.519 48.000 0.00 0.00 0.00 1.98
328 329 4.202663 CCCTCCCATCATCTCTCTCTTCTA 60.203 50.000 0.00 0.00 0.00 2.10
329 330 3.438372 CCCTCCCATCATCTCTCTCTTCT 60.438 52.174 0.00 0.00 0.00 2.85
330 331 2.899256 CCCTCCCATCATCTCTCTCTTC 59.101 54.545 0.00 0.00 0.00 2.87
331 332 2.427593 CCCCTCCCATCATCTCTCTCTT 60.428 54.545 0.00 0.00 0.00 2.85
332 333 1.149711 CCCCTCCCATCATCTCTCTCT 59.850 57.143 0.00 0.00 0.00 3.10
333 334 1.643310 CCCCTCCCATCATCTCTCTC 58.357 60.000 0.00 0.00 0.00 3.20
334 335 0.193069 CCCCCTCCCATCATCTCTCT 59.807 60.000 0.00 0.00 0.00 3.10
335 336 1.487850 GCCCCCTCCCATCATCTCTC 61.488 65.000 0.00 0.00 0.00 3.20
336 337 1.463018 GCCCCCTCCCATCATCTCT 60.463 63.158 0.00 0.00 0.00 3.10
337 338 2.888447 CGCCCCCTCCCATCATCTC 61.888 68.421 0.00 0.00 0.00 2.75
338 339 2.851102 CGCCCCCTCCCATCATCT 60.851 66.667 0.00 0.00 0.00 2.90
339 340 3.171388 ACGCCCCCTCCCATCATC 61.171 66.667 0.00 0.00 0.00 2.92
340 341 3.492353 CACGCCCCCTCCCATCAT 61.492 66.667 0.00 0.00 0.00 2.45
342 343 4.489771 CACACGCCCCCTCCCATC 62.490 72.222 0.00 0.00 0.00 3.51
346 347 4.468689 GTAGCACACGCCCCCTCC 62.469 72.222 0.00 0.00 39.83 4.30
347 348 4.814294 CGTAGCACACGCCCCCTC 62.814 72.222 0.00 0.00 45.03 4.30
360 361 0.037882 ATCATGCATCGCTCCCGTAG 60.038 55.000 0.00 0.00 35.54 3.51
361 362 0.038251 GATCATGCATCGCTCCCGTA 60.038 55.000 0.00 0.00 35.54 4.02
362 363 1.301244 GATCATGCATCGCTCCCGT 60.301 57.895 0.00 0.00 35.54 5.28
363 364 2.031516 GGATCATGCATCGCTCCCG 61.032 63.158 0.00 0.00 31.26 5.14
364 365 2.031516 CGGATCATGCATCGCTCCC 61.032 63.158 0.00 0.00 31.26 4.30
365 366 1.301244 ACGGATCATGCATCGCTCC 60.301 57.895 0.00 2.28 31.26 4.70
366 367 0.598419 TCACGGATCATGCATCGCTC 60.598 55.000 0.00 0.00 31.26 5.03
367 368 0.599466 CTCACGGATCATGCATCGCT 60.599 55.000 0.00 0.00 31.26 4.93
368 369 0.598419 TCTCACGGATCATGCATCGC 60.598 55.000 0.00 0.00 31.26 4.58
369 370 1.416373 CTCTCACGGATCATGCATCG 58.584 55.000 0.00 0.00 31.26 3.84
370 371 1.607509 CCCTCTCACGGATCATGCATC 60.608 57.143 0.00 0.00 0.00 3.91
371 372 0.395686 CCCTCTCACGGATCATGCAT 59.604 55.000 0.00 0.00 0.00 3.96
372 373 1.825341 CCCTCTCACGGATCATGCA 59.175 57.895 0.00 0.00 0.00 3.96
373 374 1.596477 GCCCTCTCACGGATCATGC 60.596 63.158 0.00 0.00 0.00 4.06
374 375 1.070445 GGCCCTCTCACGGATCATG 59.930 63.158 0.00 0.00 0.00 3.07
375 376 0.982852 TTGGCCCTCTCACGGATCAT 60.983 55.000 0.00 0.00 0.00 2.45
376 377 1.612146 TTGGCCCTCTCACGGATCA 60.612 57.895 0.00 0.00 0.00 2.92
377 378 1.144936 CTTGGCCCTCTCACGGATC 59.855 63.158 0.00 0.00 0.00 3.36
378 379 3.036429 GCTTGGCCCTCTCACGGAT 62.036 63.158 0.00 0.00 0.00 4.18
379 380 3.706373 GCTTGGCCCTCTCACGGA 61.706 66.667 0.00 0.00 0.00 4.69
381 382 4.069232 TCGCTTGGCCCTCTCACG 62.069 66.667 0.00 0.00 0.00 4.35
382 383 2.435059 GTCGCTTGGCCCTCTCAC 60.435 66.667 0.00 0.00 0.00 3.51
383 384 4.069232 CGTCGCTTGGCCCTCTCA 62.069 66.667 0.00 0.00 0.00 3.27
384 385 4.821589 CCGTCGCTTGGCCCTCTC 62.822 72.222 0.00 0.00 0.00 3.20
391 392 2.126071 ATCACGACCGTCGCTTGG 60.126 61.111 20.67 8.29 45.12 3.61
392 393 2.444624 CCATCACGACCGTCGCTTG 61.445 63.158 20.67 12.45 45.12 4.01
393 394 2.126071 CCATCACGACCGTCGCTT 60.126 61.111 20.67 3.04 45.12 4.68
394 395 3.371063 ACCATCACGACCGTCGCT 61.371 61.111 20.67 5.58 45.12 4.93
395 396 3.179265 CACCATCACGACCGTCGC 61.179 66.667 20.67 0.00 45.12 5.19
396 397 3.179265 GCACCATCACGACCGTCG 61.179 66.667 19.24 19.24 46.93 5.12
397 398 0.179121 TATGCACCATCACGACCGTC 60.179 55.000 0.00 0.00 0.00 4.79
398 399 0.464036 ATATGCACCATCACGACCGT 59.536 50.000 0.00 0.00 0.00 4.83
399 400 1.139989 GATATGCACCATCACGACCG 58.860 55.000 5.46 0.00 0.00 4.79
400 401 2.533266 AGATATGCACCATCACGACC 57.467 50.000 11.60 0.00 0.00 4.79
401 402 3.425525 CGTTAGATATGCACCATCACGAC 59.574 47.826 13.51 8.01 28.54 4.34
402 403 3.552068 CCGTTAGATATGCACCATCACGA 60.552 47.826 17.60 1.95 28.54 4.35
403 404 2.731451 CCGTTAGATATGCACCATCACG 59.269 50.000 11.60 12.10 0.00 4.35
404 405 3.728845 ACCGTTAGATATGCACCATCAC 58.271 45.455 11.60 2.88 0.00 3.06
405 406 4.126437 CAACCGTTAGATATGCACCATCA 58.874 43.478 11.60 0.00 0.00 3.07
406 407 4.127171 ACAACCGTTAGATATGCACCATC 58.873 43.478 0.00 0.00 0.00 3.51
407 408 4.150897 ACAACCGTTAGATATGCACCAT 57.849 40.909 0.00 0.00 0.00 3.55
408 409 3.620427 ACAACCGTTAGATATGCACCA 57.380 42.857 0.00 0.00 0.00 4.17
409 410 4.940463 TCTACAACCGTTAGATATGCACC 58.060 43.478 0.00 0.00 0.00 5.01
410 411 4.982916 CCTCTACAACCGTTAGATATGCAC 59.017 45.833 0.00 0.00 0.00 4.57
411 412 4.500887 GCCTCTACAACCGTTAGATATGCA 60.501 45.833 0.00 0.00 0.00 3.96
412 413 3.988517 GCCTCTACAACCGTTAGATATGC 59.011 47.826 0.00 0.00 0.00 3.14
413 414 4.227538 CGCCTCTACAACCGTTAGATATG 58.772 47.826 0.00 0.00 0.00 1.78
414 415 3.255149 CCGCCTCTACAACCGTTAGATAT 59.745 47.826 0.00 0.00 0.00 1.63
415 416 2.620115 CCGCCTCTACAACCGTTAGATA 59.380 50.000 0.00 0.00 0.00 1.98
416 417 1.407979 CCGCCTCTACAACCGTTAGAT 59.592 52.381 0.00 0.00 0.00 1.98
417 418 0.813184 CCGCCTCTACAACCGTTAGA 59.187 55.000 0.00 0.00 0.00 2.10
418 419 0.804933 GCCGCCTCTACAACCGTTAG 60.805 60.000 0.00 0.00 0.00 2.34
419 420 1.216178 GCCGCCTCTACAACCGTTA 59.784 57.895 0.00 0.00 0.00 3.18
420 421 2.047560 GCCGCCTCTACAACCGTT 60.048 61.111 0.00 0.00 0.00 4.44
421 422 1.252904 TAAGCCGCCTCTACAACCGT 61.253 55.000 0.00 0.00 0.00 4.83
422 423 0.104304 ATAAGCCGCCTCTACAACCG 59.896 55.000 0.00 0.00 0.00 4.44
423 424 1.134491 ACATAAGCCGCCTCTACAACC 60.134 52.381 0.00 0.00 0.00 3.77
424 425 2.311124 ACATAAGCCGCCTCTACAAC 57.689 50.000 0.00 0.00 0.00 3.32
425 426 2.419574 GGAACATAAGCCGCCTCTACAA 60.420 50.000 0.00 0.00 0.00 2.41
426 427 1.138266 GGAACATAAGCCGCCTCTACA 59.862 52.381 0.00 0.00 0.00 2.74
427 428 1.540580 GGGAACATAAGCCGCCTCTAC 60.541 57.143 0.00 0.00 0.00 2.59
428 429 0.756903 GGGAACATAAGCCGCCTCTA 59.243 55.000 0.00 0.00 0.00 2.43
429 430 1.527370 GGGAACATAAGCCGCCTCT 59.473 57.895 0.00 0.00 0.00 3.69
430 431 1.526225 GGGGAACATAAGCCGCCTC 60.526 63.158 0.00 0.00 0.00 4.70
431 432 0.693092 TAGGGGAACATAAGCCGCCT 60.693 55.000 0.00 0.00 44.11 5.52
432 433 0.400594 ATAGGGGAACATAAGCCGCC 59.599 55.000 0.00 0.00 37.81 6.13
433 434 3.412237 TTATAGGGGAACATAAGCCGC 57.588 47.619 0.00 0.00 37.38 6.53
434 435 5.160607 TGATTATAGGGGAACATAAGCCG 57.839 43.478 0.00 0.00 0.00 5.52
435 436 6.316390 CGATTGATTATAGGGGAACATAAGCC 59.684 42.308 0.00 0.00 0.00 4.35
436 437 6.316390 CCGATTGATTATAGGGGAACATAAGC 59.684 42.308 0.00 0.00 0.00 3.09
437 438 7.620880 TCCGATTGATTATAGGGGAACATAAG 58.379 38.462 0.00 0.00 30.49 1.73
438 439 7.562259 TCCGATTGATTATAGGGGAACATAA 57.438 36.000 0.00 0.00 30.49 1.90
439 440 7.401782 TCATCCGATTGATTATAGGGGAACATA 59.598 37.037 0.00 0.00 30.49 2.29
440 441 6.215431 TCATCCGATTGATTATAGGGGAACAT 59.785 38.462 0.00 0.00 30.49 2.71
441 442 5.546110 TCATCCGATTGATTATAGGGGAACA 59.454 40.000 0.00 0.00 30.49 3.18
442 443 6.049955 TCATCCGATTGATTATAGGGGAAC 57.950 41.667 0.00 0.00 30.49 3.62
443 444 6.891306 ATCATCCGATTGATTATAGGGGAA 57.109 37.500 0.00 0.00 32.38 3.97
444 445 6.891306 AATCATCCGATTGATTATAGGGGA 57.109 37.500 10.03 0.00 42.94 4.81
445 446 6.886459 ACAAATCATCCGATTGATTATAGGGG 59.114 38.462 11.58 3.54 43.73 4.79
446 447 7.928307 ACAAATCATCCGATTGATTATAGGG 57.072 36.000 11.58 4.76 43.73 3.53
447 448 8.607459 GCTACAAATCATCCGATTGATTATAGG 58.393 37.037 19.44 11.80 43.73 2.57
448 449 9.154847 TGCTACAAATCATCCGATTGATTATAG 57.845 33.333 11.58 14.73 43.73 1.31
449 450 9.154847 CTGCTACAAATCATCCGATTGATTATA 57.845 33.333 11.58 7.91 43.73 0.98
450 451 7.361542 GCTGCTACAAATCATCCGATTGATTAT 60.362 37.037 11.58 7.35 43.73 1.28
451 452 6.073058 GCTGCTACAAATCATCCGATTGATTA 60.073 38.462 11.58 0.00 43.73 1.75
452 453 5.278169 GCTGCTACAAATCATCCGATTGATT 60.278 40.000 6.89 6.89 45.85 2.57
453 454 4.214971 GCTGCTACAAATCATCCGATTGAT 59.785 41.667 0.00 0.00 41.12 2.57
454 455 3.561310 GCTGCTACAAATCATCCGATTGA 59.439 43.478 0.00 0.00 41.12 2.57
455 456 3.605461 CGCTGCTACAAATCATCCGATTG 60.605 47.826 0.00 0.00 41.12 2.67
456 457 2.545526 CGCTGCTACAAATCATCCGATT 59.454 45.455 0.00 0.00 43.94 3.34
457 458 2.138320 CGCTGCTACAAATCATCCGAT 58.862 47.619 0.00 0.00 0.00 4.18
458 459 1.570813 CGCTGCTACAAATCATCCGA 58.429 50.000 0.00 0.00 0.00 4.55
459 460 0.041839 GCGCTGCTACAAATCATCCG 60.042 55.000 0.00 0.00 0.00 4.18
460 461 0.308993 GGCGCTGCTACAAATCATCC 59.691 55.000 7.64 0.00 0.00 3.51
461 462 1.303309 AGGCGCTGCTACAAATCATC 58.697 50.000 7.64 0.00 0.00 2.92
462 463 1.755179 AAGGCGCTGCTACAAATCAT 58.245 45.000 7.64 0.00 0.00 2.45
463 464 1.199789 CAAAGGCGCTGCTACAAATCA 59.800 47.619 7.64 0.00 0.00 2.57
464 465 1.200020 ACAAAGGCGCTGCTACAAATC 59.800 47.619 7.64 0.00 0.00 2.17
465 466 1.068333 CACAAAGGCGCTGCTACAAAT 60.068 47.619 7.64 0.00 0.00 2.32
466 467 0.310543 CACAAAGGCGCTGCTACAAA 59.689 50.000 7.64 0.00 0.00 2.83
467 468 0.533978 TCACAAAGGCGCTGCTACAA 60.534 50.000 7.64 0.00 0.00 2.41
468 469 0.533978 TTCACAAAGGCGCTGCTACA 60.534 50.000 7.64 0.00 0.00 2.74
469 470 0.804989 ATTCACAAAGGCGCTGCTAC 59.195 50.000 7.64 0.00 0.00 3.58
470 471 1.533625 AATTCACAAAGGCGCTGCTA 58.466 45.000 7.64 0.00 0.00 3.49
471 472 0.675633 AAATTCACAAAGGCGCTGCT 59.324 45.000 7.64 0.00 0.00 4.24
472 473 2.346099 TAAATTCACAAAGGCGCTGC 57.654 45.000 7.64 0.00 0.00 5.25
473 474 4.980590 TGTATAAATTCACAAAGGCGCTG 58.019 39.130 7.64 0.00 0.00 5.18
474 475 4.096382 CCTGTATAAATTCACAAAGGCGCT 59.904 41.667 7.64 0.00 0.00 5.92
475 476 4.095782 TCCTGTATAAATTCACAAAGGCGC 59.904 41.667 0.00 0.00 0.00 6.53
476 477 5.811399 TCCTGTATAAATTCACAAAGGCG 57.189 39.130 0.00 0.00 0.00 5.52
477 478 7.547227 ACAATCCTGTATAAATTCACAAAGGC 58.453 34.615 0.00 0.00 32.54 4.35
478 479 8.190784 GGACAATCCTGTATAAATTCACAAAGG 58.809 37.037 0.00 0.00 35.30 3.11
479 480 8.190784 GGGACAATCCTGTATAAATTCACAAAG 58.809 37.037 0.00 0.00 36.57 2.77
480 481 7.671819 TGGGACAATCCTGTATAAATTCACAAA 59.328 33.333 0.00 0.00 36.57 2.83
481 482 7.178573 TGGGACAATCCTGTATAAATTCACAA 58.821 34.615 0.00 0.00 36.57 3.33
482 483 6.726379 TGGGACAATCCTGTATAAATTCACA 58.274 36.000 0.00 0.00 36.57 3.58
507 508 9.589111 GCGGGATATTTTACAAAGGAAATTAAA 57.411 29.630 0.00 0.00 0.00 1.52
508 509 8.750298 TGCGGGATATTTTACAAAGGAAATTAA 58.250 29.630 0.00 0.00 0.00 1.40
509 510 8.294954 TGCGGGATATTTTACAAAGGAAATTA 57.705 30.769 0.00 0.00 0.00 1.40
510 511 7.176589 TGCGGGATATTTTACAAAGGAAATT 57.823 32.000 0.00 0.00 0.00 1.82
511 512 6.783708 TGCGGGATATTTTACAAAGGAAAT 57.216 33.333 0.00 0.00 0.00 2.17
512 513 6.591750 TTGCGGGATATTTTACAAAGGAAA 57.408 33.333 0.00 0.00 0.00 3.13
513 514 6.591750 TTTGCGGGATATTTTACAAAGGAA 57.408 33.333 0.00 0.00 0.00 3.36
514 515 6.591750 TTTTGCGGGATATTTTACAAAGGA 57.408 33.333 0.00 0.00 0.00 3.36
544 545 8.841300 GCTGAGAAAGGGAGTATTTTATAAAGG 58.159 37.037 0.00 0.00 0.00 3.11
545 546 9.396022 TGCTGAGAAAGGGAGTATTTTATAAAG 57.604 33.333 0.00 0.00 0.00 1.85
546 547 9.396022 CTGCTGAGAAAGGGAGTATTTTATAAA 57.604 33.333 0.00 0.00 0.00 1.40
547 548 8.548877 ACTGCTGAGAAAGGGAGTATTTTATAA 58.451 33.333 0.00 0.00 32.60 0.98
548 549 7.987458 CACTGCTGAGAAAGGGAGTATTTTATA 59.013 37.037 0.00 0.00 33.05 0.98
549 550 6.825721 CACTGCTGAGAAAGGGAGTATTTTAT 59.174 38.462 0.00 0.00 33.05 1.40
550 551 6.173339 CACTGCTGAGAAAGGGAGTATTTTA 58.827 40.000 0.00 0.00 33.05 1.52
551 552 5.006386 CACTGCTGAGAAAGGGAGTATTTT 58.994 41.667 0.00 0.00 33.05 1.82
552 553 4.583871 CACTGCTGAGAAAGGGAGTATTT 58.416 43.478 0.00 0.00 33.05 1.40
553 554 3.620966 GCACTGCTGAGAAAGGGAGTATT 60.621 47.826 0.00 0.00 33.05 1.89
554 555 2.093235 GCACTGCTGAGAAAGGGAGTAT 60.093 50.000 0.00 0.00 33.05 2.12
555 556 1.276421 GCACTGCTGAGAAAGGGAGTA 59.724 52.381 0.00 0.00 33.05 2.59
556 557 0.036022 GCACTGCTGAGAAAGGGAGT 59.964 55.000 0.00 0.00 34.58 3.85
557 558 0.324285 AGCACTGCTGAGAAAGGGAG 59.676 55.000 1.67 0.00 37.57 4.30
558 559 0.767375 AAGCACTGCTGAGAAAGGGA 59.233 50.000 3.73 0.00 39.62 4.20
559 560 2.479566 TAAGCACTGCTGAGAAAGGG 57.520 50.000 3.73 0.00 39.62 3.95
560 561 4.764172 AGTATAAGCACTGCTGAGAAAGG 58.236 43.478 3.73 0.00 39.62 3.11
561 562 5.659463 AGAGTATAAGCACTGCTGAGAAAG 58.341 41.667 3.73 0.00 39.62 2.62
562 563 5.655488 GAGAGTATAAGCACTGCTGAGAAA 58.345 41.667 3.73 0.00 39.62 2.52
563 564 4.201960 CGAGAGTATAAGCACTGCTGAGAA 60.202 45.833 3.73 0.00 39.62 2.87
564 565 3.313803 CGAGAGTATAAGCACTGCTGAGA 59.686 47.826 3.73 0.00 39.62 3.27
565 566 3.549827 CCGAGAGTATAAGCACTGCTGAG 60.550 52.174 3.73 0.00 39.62 3.35
566 567 2.359214 CCGAGAGTATAAGCACTGCTGA 59.641 50.000 3.73 0.00 39.62 4.26
567 568 2.359214 TCCGAGAGTATAAGCACTGCTG 59.641 50.000 3.73 0.00 39.62 4.41
568 569 2.656002 TCCGAGAGTATAAGCACTGCT 58.344 47.619 0.00 0.00 42.56 4.24
569 570 3.438297 TTCCGAGAGTATAAGCACTGC 57.562 47.619 0.00 0.00 0.00 4.40
598 599 0.035630 AGAGGAAAGCAGCGCTGATT 60.036 50.000 40.21 36.84 41.42 2.57
605 606 0.617935 AGAAGGGAGAGGAAAGCAGC 59.382 55.000 0.00 0.00 0.00 5.25
635 638 1.630244 CTCGGCGAGCACAGGAAAAG 61.630 60.000 25.31 0.00 0.00 2.27
901 905 1.000506 GAGCAGGTTGTCCACGAACTA 59.999 52.381 0.00 0.00 35.89 2.24
1282 1471 1.086696 GAACTATCGCAGCTGGCAAA 58.913 50.000 17.12 0.00 45.17 3.68
1350 1539 3.153130 TCCTCGTTGCCATTCAATCAAA 58.847 40.909 0.00 0.00 36.99 2.69
1428 1617 2.413837 CATCGATCAGCAGCATCATCA 58.586 47.619 0.00 0.00 0.00 3.07
1584 1808 1.376037 CTCCAAGTCCGTGGCTTCC 60.376 63.158 0.00 0.00 38.68 3.46
1742 2061 0.889994 TGCAATCTGTTGATGGGTGC 59.110 50.000 0.00 0.00 37.53 5.01
1746 2065 4.247267 ACAAAGTGCAATCTGTTGATGG 57.753 40.909 4.23 0.00 37.53 3.51
1752 2071 6.449635 TTTCAAGTACAAAGTGCAATCTGT 57.550 33.333 0.00 0.00 0.00 3.41
1785 2105 8.037166 GCAAAAGAACTGGATCAAATTAGGATT 58.963 33.333 0.00 0.00 0.00 3.01
2059 2396 1.679680 CATTTGGAGGTGCCTAGCATG 59.320 52.381 0.00 0.00 41.91 4.06
2175 2512 8.101510 CAGTGTCTTCAAAATTTTGTAAACACG 58.898 33.333 31.10 26.42 42.34 4.49
2253 2596 1.911357 TGCCAACTCACATCCAGATCT 59.089 47.619 0.00 0.00 0.00 2.75
2333 2695 8.933653 TCTTCCATTTAGTTTGGGATTTTCTTT 58.066 29.630 0.00 0.00 34.85 2.52
2387 2943 6.932356 ACATGCAGTACATTCTTTATCCAG 57.068 37.500 0.00 0.00 36.64 3.86
2392 2948 7.824289 AGCTAGAAACATGCAGTACATTCTTTA 59.176 33.333 0.00 0.00 36.64 1.85
2475 3309 4.160626 AGAATTTTGAGACGGAGGGAGTAG 59.839 45.833 0.00 0.00 0.00 2.57
2476 3310 4.094476 AGAATTTTGAGACGGAGGGAGTA 58.906 43.478 0.00 0.00 0.00 2.59
2477 3311 2.907042 AGAATTTTGAGACGGAGGGAGT 59.093 45.455 0.00 0.00 0.00 3.85
2478 3312 3.618690 AGAATTTTGAGACGGAGGGAG 57.381 47.619 0.00 0.00 0.00 4.30
2479 3313 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
2480 3314 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
2481 3315 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
2482 3316 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
2483 3317 6.522054 ACTAAGACAAGAATTTTGAGACGGA 58.478 36.000 7.18 0.00 0.00 4.69
2484 3318 6.787085 ACTAAGACAAGAATTTTGAGACGG 57.213 37.500 7.18 0.00 0.00 4.79
2485 3319 9.798885 CTAAACTAAGACAAGAATTTTGAGACG 57.201 33.333 7.18 0.00 0.00 4.18
2496 3330 9.107177 CCGTATCTAGACTAAACTAAGACAAGA 57.893 37.037 0.00 0.00 0.00 3.02
2497 3331 9.107177 TCCGTATCTAGACTAAACTAAGACAAG 57.893 37.037 0.00 0.00 0.00 3.16
2498 3332 9.624373 ATCCGTATCTAGACTAAACTAAGACAA 57.376 33.333 0.00 0.00 0.00 3.18
2499 3333 9.053840 CATCCGTATCTAGACTAAACTAAGACA 57.946 37.037 0.00 0.00 0.00 3.41
2500 3334 9.054922 ACATCCGTATCTAGACTAAACTAAGAC 57.945 37.037 0.00 0.00 0.00 3.01
2533 3367 9.607988 ACGGATGTATCAAGTCATGTTTTAATA 57.392 29.630 0.00 0.00 0.00 0.98
2534 3368 8.506168 ACGGATGTATCAAGTCATGTTTTAAT 57.494 30.769 0.00 0.00 0.00 1.40
2535 3369 7.915293 ACGGATGTATCAAGTCATGTTTTAA 57.085 32.000 0.00 0.00 0.00 1.52
2536 3370 9.607988 AATACGGATGTATCAAGTCATGTTTTA 57.392 29.630 0.00 0.00 40.42 1.52
2537 3371 8.506168 AATACGGATGTATCAAGTCATGTTTT 57.494 30.769 0.00 0.00 40.42 2.43
2538 3372 8.506168 AAATACGGATGTATCAAGTCATGTTT 57.494 30.769 0.00 0.00 40.42 2.83
2539 3373 9.261180 CTAAATACGGATGTATCAAGTCATGTT 57.739 33.333 0.00 0.00 40.42 2.71
2540 3374 8.638873 TCTAAATACGGATGTATCAAGTCATGT 58.361 33.333 0.00 0.00 40.42 3.21
2541 3375 8.916654 GTCTAAATACGGATGTATCAAGTCATG 58.083 37.037 0.00 0.00 40.42 3.07
2542 3376 8.638873 TGTCTAAATACGGATGTATCAAGTCAT 58.361 33.333 0.00 0.00 40.42 3.06
2543 3377 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
2544 3378 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
2545 3379 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
2548 3382 9.825109 TGAATTTGTCTAAATACGGATGTATCA 57.175 29.630 0.00 0.00 40.42 2.15
2551 3385 9.878667 TCTTGAATTTGTCTAAATACGGATGTA 57.121 29.630 0.00 0.00 35.50 2.29
2552 3386 8.665685 GTCTTGAATTTGTCTAAATACGGATGT 58.334 33.333 0.00 0.00 35.50 3.06
2553 3387 8.664798 TGTCTTGAATTTGTCTAAATACGGATG 58.335 33.333 0.00 0.00 35.50 3.51
2554 3388 8.786826 TGTCTTGAATTTGTCTAAATACGGAT 57.213 30.769 0.00 0.00 35.50 4.18
2555 3389 8.610248 TTGTCTTGAATTTGTCTAAATACGGA 57.390 30.769 0.00 0.00 35.50 4.69
2556 3390 8.717821 TCTTGTCTTGAATTTGTCTAAATACGG 58.282 33.333 0.00 0.00 35.50 4.02
2563 3397 9.748708 CCAAAATTCTTGTCTTGAATTTGTCTA 57.251 29.630 13.02 0.00 46.81 2.59
2564 3398 7.712205 CCCAAAATTCTTGTCTTGAATTTGTCT 59.288 33.333 13.02 0.00 46.81 3.41
2565 3399 7.710475 TCCCAAAATTCTTGTCTTGAATTTGTC 59.290 33.333 13.02 0.00 46.81 3.18
2566 3400 7.495606 GTCCCAAAATTCTTGTCTTGAATTTGT 59.504 33.333 13.02 4.15 46.81 2.83
2567 3401 7.306749 CGTCCCAAAATTCTTGTCTTGAATTTG 60.307 37.037 13.02 8.67 46.81 2.32
2569 3403 6.215845 CGTCCCAAAATTCTTGTCTTGAATT 58.784 36.000 0.00 0.00 43.44 2.17
2570 3404 5.278957 CCGTCCCAAAATTCTTGTCTTGAAT 60.279 40.000 0.00 0.00 35.88 2.57
2571 3405 4.037446 CCGTCCCAAAATTCTTGTCTTGAA 59.963 41.667 0.00 0.00 0.00 2.69
2572 3406 3.568007 CCGTCCCAAAATTCTTGTCTTGA 59.432 43.478 0.00 0.00 0.00 3.02
2573 3407 3.568007 TCCGTCCCAAAATTCTTGTCTTG 59.432 43.478 0.00 0.00 0.00 3.02
2574 3408 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2575 3409 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2576 3410 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2577 3411 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2578 3412 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2579 3413 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2580 3414 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2581 3415 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2582 3416 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2583 3417 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2584 3418 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2585 3419 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
2586 3420 1.961133 AAATACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
2587 3421 2.023695 ACTAAATACTCCCTCCGTCCCA 60.024 50.000 0.00 0.00 0.00 4.37
2588 3422 2.675583 ACTAAATACTCCCTCCGTCCC 58.324 52.381 0.00 0.00 0.00 4.46
2589 3423 4.892345 AGTTACTAAATACTCCCTCCGTCC 59.108 45.833 0.00 0.00 0.00 4.79
2590 3424 5.359292 ACAGTTACTAAATACTCCCTCCGTC 59.641 44.000 0.00 0.00 0.00 4.79
2591 3425 5.267587 ACAGTTACTAAATACTCCCTCCGT 58.732 41.667 0.00 0.00 0.00 4.69
2592 3426 5.848833 ACAGTTACTAAATACTCCCTCCG 57.151 43.478 0.00 0.00 0.00 4.63
2593 3427 8.702819 ACATAACAGTTACTAAATACTCCCTCC 58.297 37.037 0.00 0.00 0.00 4.30
2594 3428 9.747293 GACATAACAGTTACTAAATACTCCCTC 57.253 37.037 0.00 0.00 0.00 4.30
2595 3429 9.490083 AGACATAACAGTTACTAAATACTCCCT 57.510 33.333 0.00 0.00 0.00 4.20
2596 3430 9.747293 GAGACATAACAGTTACTAAATACTCCC 57.253 37.037 0.00 0.00 0.00 4.30
2612 3446 4.882842 TGGTACTGCTTGAGACATAACA 57.117 40.909 0.00 0.00 0.00 2.41
2620 3454 3.466836 TGTCAACTTGGTACTGCTTGAG 58.533 45.455 0.00 0.00 0.00 3.02
2630 3464 4.280436 TCCGATACATTGTCAACTTGGT 57.720 40.909 0.00 0.00 0.00 3.67
2640 3474 7.704899 TGACCGCTATATAATTCCGATACATTG 59.295 37.037 0.00 0.00 0.00 2.82
2641 3475 7.705325 GTGACCGCTATATAATTCCGATACATT 59.295 37.037 0.00 0.00 0.00 2.71
2665 3501 9.457110 TTTATTTGCAGTATGTAACAAACTGTG 57.543 29.630 3.89 0.00 41.45 3.66
2673 3509 7.200455 GGGACCATTTATTTGCAGTATGTAAC 58.800 38.462 0.00 0.00 41.45 2.50
2706 3543 8.340002 TGATCTAGATGGCTACTATCTACCAAT 58.660 37.037 10.74 0.00 36.38 3.16
2772 3738 2.689983 CAACATCCACAAGGGGAATAGC 59.310 50.000 0.00 0.00 41.12 2.97
2874 3848 4.588528 ACAAACATTTACAGAGGGCAACAT 59.411 37.500 0.00 0.00 39.74 2.71
3006 3981 2.548480 GCCTCACTTGTAACACACTTCC 59.452 50.000 0.00 0.00 0.00 3.46
3215 4218 3.119245 CCCCAGTCATGCATTTCTGAAAG 60.119 47.826 22.10 13.41 0.00 2.62
3280 4300 3.146104 TCTTCTTCTTCTTTGCAGGGG 57.854 47.619 0.00 0.00 0.00 4.79
3491 4534 9.520515 AATCTAAAAGTCAACCAACATGTAGAT 57.479 29.630 0.00 0.00 0.00 1.98
3540 4708 5.179045 TCGTTGGATCTAGGAATAACGAC 57.821 43.478 16.29 1.98 43.05 4.34
3783 4960 4.274950 GCTGTTTGGTAGCTTGTTGAGTTA 59.725 41.667 0.00 0.00 38.14 2.24
3812 5225 3.928727 TGGGAATCGTACCGTGATATC 57.071 47.619 0.00 0.00 0.00 1.63
3909 5332 2.813754 GTTTGTAGTGCTGCTGAATCCA 59.186 45.455 0.00 0.00 0.00 3.41
3910 5333 2.813754 TGTTTGTAGTGCTGCTGAATCC 59.186 45.455 0.00 0.00 0.00 3.01
3930 5353 3.679389 ACAGAAAGGTAGCAATCACCTG 58.321 45.455 0.00 0.00 45.90 4.00
3932 5355 3.010420 GGACAGAAAGGTAGCAATCACC 58.990 50.000 0.00 0.00 36.22 4.02
3933 5356 3.674997 TGGACAGAAAGGTAGCAATCAC 58.325 45.455 0.00 0.00 0.00 3.06
3934 5357 4.574674 ATGGACAGAAAGGTAGCAATCA 57.425 40.909 0.00 0.00 0.00 2.57
3935 5358 5.904362 AAATGGACAGAAAGGTAGCAATC 57.096 39.130 0.00 0.00 0.00 2.67
3950 5377 9.952188 GAGTTGGATAATAAGCTTAAAATGGAC 57.048 33.333 10.85 4.90 0.00 4.02
3979 5406 2.534990 CTTGGCCTGTTTTGGGGAATA 58.465 47.619 3.32 0.00 0.00 1.75
4006 5434 4.568152 ACACATTTTGACTGCTGGTAAC 57.432 40.909 0.00 0.00 0.00 2.50
4012 5440 4.144297 ACCATGTACACATTTTGACTGCT 58.856 39.130 0.00 0.00 33.61 4.24
4024 5452 7.707774 AACTTAAATTTGCAACCATGTACAC 57.292 32.000 0.00 0.00 0.00 2.90
4080 5512 3.062234 GCGTTAGGATCTAAAGTGTGTGC 59.938 47.826 0.00 0.00 0.00 4.57
4226 5711 3.064931 CCTTAACGTGGTTGACCTCTTC 58.935 50.000 1.34 0.00 36.82 2.87
4255 5740 1.584175 GATGATGAGCTGCAGTCCTG 58.416 55.000 16.64 0.00 0.00 3.86
4264 5749 1.745141 GCTTGGGAACGATGATGAGCT 60.745 52.381 0.00 0.00 0.00 4.09
4295 5802 1.153628 GATAACGAGCAGCCACGGT 60.154 57.895 12.98 9.45 0.00 4.83
4330 5839 4.929808 GTCTGAAGTACATAACCACAGTGG 59.070 45.833 18.93 18.93 45.02 4.00
4331 5840 5.538118 TGTCTGAAGTACATAACCACAGTG 58.462 41.667 0.00 0.00 35.01 3.66
4332 5841 5.801531 TGTCTGAAGTACATAACCACAGT 57.198 39.130 0.00 0.00 35.01 3.55
4456 5977 4.768448 TGCATCCTTTCACATGAGAACAAT 59.232 37.500 4.96 0.00 0.00 2.71
4547 7159 1.859080 GGTGATTTAGTGATCCGCGTC 59.141 52.381 4.92 0.00 0.00 5.19
4559 7171 3.781407 TCCGGACATTTAGGGGTGATTTA 59.219 43.478 0.00 0.00 0.00 1.40
4578 7190 1.226603 GACCGAACTGTCCGATCCG 60.227 63.158 0.00 0.00 0.00 4.18
4597 7209 2.032426 ACCGACGTTGGATGTCAAAAAC 59.968 45.455 29.00 0.00 37.08 2.43
4608 7220 0.948678 AATTTGGTGACCGACGTTGG 59.051 50.000 20.86 20.86 0.00 3.77
4643 7257 4.202305 TGGTTTGTGGAATTTTGGACATCC 60.202 41.667 0.00 0.00 0.00 3.51
4646 7260 4.026744 TCTGGTTTGTGGAATTTTGGACA 58.973 39.130 0.00 0.00 0.00 4.02
4676 7290 0.958876 CGCCCACAAACCTTCCCTAC 60.959 60.000 0.00 0.00 0.00 3.18
4712 7378 1.612462 CCCATGCTGTCGGATGCATAT 60.612 52.381 16.92 0.40 46.65 1.78
4748 7525 1.060622 CTAGACGGAGCGACACGAC 59.939 63.158 0.00 0.00 0.00 4.34
4826 7618 3.869912 GCGGGCATGAATGTGTATAGGAT 60.870 47.826 0.00 0.00 0.00 3.24
4827 7619 2.549992 GCGGGCATGAATGTGTATAGGA 60.550 50.000 0.00 0.00 0.00 2.94
4832 7624 1.817520 CGGCGGGCATGAATGTGTA 60.818 57.895 0.00 0.00 0.00 2.90
4939 7991 1.006571 GTCGCGGAGAACCACTTCA 60.007 57.895 6.13 0.00 35.59 3.02
5078 8226 1.214367 GAACTCCTTGTTCGTTGCGA 58.786 50.000 0.00 0.00 44.49 5.10
5106 8254 1.608590 CGCTCCAACAACAACTCCATT 59.391 47.619 0.00 0.00 0.00 3.16
5131 8282 2.158914 ACGCTGGATCATGATTGTAGCA 60.159 45.455 25.82 0.00 0.00 3.49
5183 8334 3.378339 ACGCAGTATCCTATTTGTACGC 58.622 45.455 0.00 0.00 41.94 4.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.