Multiple sequence alignment - TraesCS4D01G269800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G269800 chr4D 100.000 2618 0 0 1 2618 441062202 441059585 0.000000e+00 4835.0
1 TraesCS4D01G269800 chr4D 95.181 83 4 0 1898 1980 435644404 435644486 5.880000e-27 132.0
2 TraesCS4D01G269800 chr4A 92.730 1183 59 10 633 1792 26644482 26645660 0.000000e+00 1683.0
3 TraesCS4D01G269800 chr4A 91.582 1188 68 13 633 1792 26629189 26630372 0.000000e+00 1611.0
4 TraesCS4D01G269800 chr4A 93.631 157 8 2 478 634 26628910 26629064 1.570000e-57 233.0
5 TraesCS4D01G269800 chr4A 100.000 30 0 0 1815 1844 26630378 26630407 3.640000e-04 56.5
6 TraesCS4D01G269800 chr4A 100.000 30 0 0 1815 1844 26645666 26645695 3.640000e-04 56.5
7 TraesCS4D01G269800 chr4B 93.948 727 41 1 1000 1726 546649498 546648775 0.000000e+00 1096.0
8 TraesCS4D01G269800 chr4B 89.809 628 51 8 386 1004 546656915 546656292 0.000000e+00 793.0
9 TraesCS4D01G269800 chr4B 87.259 518 61 3 2089 2606 546584234 546583722 1.040000e-163 586.0
10 TraesCS4D01G269800 chr4B 87.259 518 61 3 2089 2606 546606888 546606376 1.040000e-163 586.0
11 TraesCS4D01G269800 chrUn 90.177 509 30 5 633 1122 314737263 314737770 0.000000e+00 645.0
12 TraesCS4D01G269800 chrUn 87.259 518 61 3 2089 2606 350650721 350650209 1.040000e-163 586.0
13 TraesCS4D01G269800 chrUn 88.525 427 28 7 210 634 314736732 314737139 5.030000e-137 497.0
14 TraesCS4D01G269800 chrUn 83.640 489 75 5 1142 1628 338978903 338979388 3.070000e-124 455.0
15 TraesCS4D01G269800 chrUn 92.857 84 6 0 1 84 45893578 45893661 3.540000e-24 122.0
16 TraesCS4D01G269800 chr7B 83.648 636 87 11 1000 1631 584186030 584185408 1.350000e-162 582.0
17 TraesCS4D01G269800 chr7A 83.048 643 94 13 992 1631 622742214 622741584 1.050000e-158 569.0
18 TraesCS4D01G269800 chr5D 83.640 489 75 5 1142 1628 493710593 493711078 3.070000e-124 455.0
19 TraesCS4D01G269800 chr5D 83.640 489 75 5 1142 1628 493714165 493714650 3.070000e-124 455.0
20 TraesCS4D01G269800 chr5D 83.640 489 75 5 1142 1628 493716646 493717131 3.070000e-124 455.0
21 TraesCS4D01G269800 chr5D 97.619 84 2 0 1897 1980 42242303 42242386 7.550000e-31 145.0
22 TraesCS4D01G269800 chr5D 91.860 86 7 0 1 86 326737866 326737951 1.270000e-23 121.0
23 TraesCS4D01G269800 chr5D 90.909 88 7 1 1 88 116575972 116576058 1.650000e-22 117.0
24 TraesCS4D01G269800 chr5D 90.909 88 7 1 1 88 302875463 302875377 1.650000e-22 117.0
25 TraesCS4D01G269800 chr1D 96.512 86 3 0 1895 1980 471923465 471923550 2.720000e-30 143.0
26 TraesCS4D01G269800 chr1D 89.130 92 10 0 1 92 471759175 471759266 5.920000e-22 115.0
27 TraesCS4D01G269800 chr5B 96.429 84 3 0 1897 1980 57975866 57975949 3.510000e-29 139.0
28 TraesCS4D01G269800 chr2D 96.386 83 2 1 1898 1980 341569338 341569257 4.540000e-28 135.0
29 TraesCS4D01G269800 chr2D 96.296 81 3 0 1897 1977 639896712 639896792 1.630000e-27 134.0
30 TraesCS4D01G269800 chr2D 92.222 90 7 0 1 90 631194346 631194257 7.610000e-26 128.0
31 TraesCS4D01G269800 chr7D 95.238 84 4 0 1897 1980 529065107 529065190 1.630000e-27 134.0
32 TraesCS4D01G269800 chr7D 88.776 98 9 2 1 98 181008125 181008030 4.580000e-23 119.0
33 TraesCS4D01G269800 chr1A 95.238 84 4 0 1897 1980 582452099 582452016 1.630000e-27 134.0
34 TraesCS4D01G269800 chr3A 95.181 83 4 0 1898 1980 696400988 696400906 5.880000e-27 132.0
35 TraesCS4D01G269800 chr6D 90.110 91 9 0 1 91 436404306 436404216 4.580000e-23 119.0
36 TraesCS4D01G269800 chr3B 91.765 85 7 0 1 85 193885535 193885451 4.580000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G269800 chr4D 441059585 441062202 2617 True 4835.00 4835 100.000 1 2618 1 chr4D.!!$R1 2617
1 TraesCS4D01G269800 chr4A 26644482 26645695 1213 False 869.75 1683 96.365 633 1844 2 chr4A.!!$F2 1211
2 TraesCS4D01G269800 chr4A 26628910 26630407 1497 False 633.50 1611 95.071 478 1844 3 chr4A.!!$F1 1366
3 TraesCS4D01G269800 chr4B 546648775 546649498 723 True 1096.00 1096 93.948 1000 1726 1 chr4B.!!$R3 726
4 TraesCS4D01G269800 chr4B 546656292 546656915 623 True 793.00 793 89.809 386 1004 1 chr4B.!!$R4 618
5 TraesCS4D01G269800 chr4B 546583722 546584234 512 True 586.00 586 87.259 2089 2606 1 chr4B.!!$R1 517
6 TraesCS4D01G269800 chr4B 546606376 546606888 512 True 586.00 586 87.259 2089 2606 1 chr4B.!!$R2 517
7 TraesCS4D01G269800 chrUn 350650209 350650721 512 True 586.00 586 87.259 2089 2606 1 chrUn.!!$R1 517
8 TraesCS4D01G269800 chrUn 314736732 314737770 1038 False 571.00 645 89.351 210 1122 2 chrUn.!!$F3 912
9 TraesCS4D01G269800 chr7B 584185408 584186030 622 True 582.00 582 83.648 1000 1631 1 chr7B.!!$R1 631
10 TraesCS4D01G269800 chr7A 622741584 622742214 630 True 569.00 569 83.048 992 1631 1 chr7A.!!$R1 639
11 TraesCS4D01G269800 chr5D 493710593 493717131 6538 False 455.00 455 83.640 1142 1628 3 chr5D.!!$F4 486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
141 142 0.106569 AGGGCGATCCATGCATTTGA 60.107 50.0 0.0 0.0 38.24 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2086 8300 0.107459 GACATCCCAGCCTCCTTGTC 60.107 60.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.784329 CGAATCTCCATGCAAGATCAATG 58.216 43.478 8.72 0.00 32.29 2.82
23 24 4.320275 CGAATCTCCATGCAAGATCAATGG 60.320 45.833 8.72 9.35 32.29 3.16
24 25 3.937778 TCTCCATGCAAGATCAATGGA 57.062 42.857 14.85 14.85 38.92 3.41
25 26 4.239428 TCTCCATGCAAGATCAATGGAA 57.761 40.909 15.86 8.20 40.47 3.53
26 27 4.800023 TCTCCATGCAAGATCAATGGAAT 58.200 39.130 15.86 0.00 40.47 3.01
27 28 5.944135 TCTCCATGCAAGATCAATGGAATA 58.056 37.500 15.86 8.20 40.47 1.75
28 29 6.549242 TCTCCATGCAAGATCAATGGAATAT 58.451 36.000 15.86 0.00 40.47 1.28
29 30 7.692172 TCTCCATGCAAGATCAATGGAATATA 58.308 34.615 15.86 4.84 40.47 0.86
30 31 8.165397 TCTCCATGCAAGATCAATGGAATATAA 58.835 33.333 15.86 3.20 40.47 0.98
31 32 8.888836 TCCATGCAAGATCAATGGAATATAAT 57.111 30.769 13.83 0.00 38.35 1.28
32 33 9.978336 TCCATGCAAGATCAATGGAATATAATA 57.022 29.630 13.83 0.00 38.35 0.98
58 59 9.790389 ATTGACTAAGACATAACGAAGTCTAAG 57.210 33.333 0.00 0.00 45.00 2.18
59 60 8.332996 TGACTAAGACATAACGAAGTCTAAGT 57.667 34.615 0.00 0.00 45.00 2.24
60 61 8.449397 TGACTAAGACATAACGAAGTCTAAGTC 58.551 37.037 0.00 0.00 45.00 3.01
61 62 7.462731 ACTAAGACATAACGAAGTCTAAGTCG 58.537 38.462 0.00 0.00 45.00 4.18
62 63 6.492007 AAGACATAACGAAGTCTAAGTCGA 57.508 37.500 0.00 0.00 45.00 4.20
63 64 5.867166 AGACATAACGAAGTCTAAGTCGAC 58.133 41.667 7.70 7.70 45.00 4.20
64 65 5.642919 AGACATAACGAAGTCTAAGTCGACT 59.357 40.000 13.58 13.58 45.00 4.18
65 66 5.629097 ACATAACGAAGTCTAAGTCGACTG 58.371 41.667 20.85 7.79 45.00 3.51
66 67 5.410746 ACATAACGAAGTCTAAGTCGACTGA 59.589 40.000 20.85 11.31 45.00 3.41
67 68 4.407496 AACGAAGTCTAAGTCGACTGAG 57.593 45.455 22.32 22.32 45.00 3.35
68 69 3.661944 ACGAAGTCTAAGTCGACTGAGA 58.338 45.455 26.12 26.12 43.14 3.27
78 79 3.833545 GTCGACTGAGACTTAGCAGAA 57.166 47.619 8.70 0.00 38.09 3.02
79 80 3.494232 GTCGACTGAGACTTAGCAGAAC 58.506 50.000 8.70 0.00 38.09 3.01
80 81 3.189702 GTCGACTGAGACTTAGCAGAACT 59.810 47.826 8.70 0.00 38.09 3.01
81 82 3.189495 TCGACTGAGACTTAGCAGAACTG 59.811 47.826 0.00 0.00 36.07 3.16
82 83 3.189495 CGACTGAGACTTAGCAGAACTGA 59.811 47.826 5.97 0.00 36.07 3.41
83 84 4.142491 CGACTGAGACTTAGCAGAACTGAT 60.142 45.833 5.97 1.66 36.07 2.90
84 85 5.065346 CGACTGAGACTTAGCAGAACTGATA 59.935 44.000 5.97 0.60 36.07 2.15
85 86 6.403746 CGACTGAGACTTAGCAGAACTGATAA 60.404 42.308 11.15 11.15 38.88 1.75
86 87 7.233389 ACTGAGACTTAGCAGAACTGATAAA 57.767 36.000 12.39 0.00 40.38 1.40
87 88 7.671302 ACTGAGACTTAGCAGAACTGATAAAA 58.329 34.615 12.39 0.00 40.38 1.52
88 89 8.150945 ACTGAGACTTAGCAGAACTGATAAAAA 58.849 33.333 12.39 0.00 40.38 1.94
89 90 9.160496 CTGAGACTTAGCAGAACTGATAAAAAT 57.840 33.333 12.39 3.34 40.38 1.82
127 128 6.630444 TGTAGAGTATAAACTAGAAGGGCG 57.370 41.667 0.00 0.00 35.56 6.13
128 129 6.359804 TGTAGAGTATAAACTAGAAGGGCGA 58.640 40.000 0.00 0.00 35.56 5.54
129 130 7.002879 TGTAGAGTATAAACTAGAAGGGCGAT 58.997 38.462 0.00 0.00 35.56 4.58
130 131 6.578163 AGAGTATAAACTAGAAGGGCGATC 57.422 41.667 0.00 0.00 35.56 3.69
131 132 5.477637 AGAGTATAAACTAGAAGGGCGATCC 59.522 44.000 0.00 0.00 35.56 3.36
132 133 5.145564 AGTATAAACTAGAAGGGCGATCCA 58.854 41.667 0.00 0.00 33.78 3.41
133 134 5.780793 AGTATAAACTAGAAGGGCGATCCAT 59.219 40.000 0.00 0.00 33.78 3.41
134 135 2.918712 AACTAGAAGGGCGATCCATG 57.081 50.000 0.00 0.00 38.24 3.66
135 136 0.394565 ACTAGAAGGGCGATCCATGC 59.605 55.000 0.00 0.00 38.24 4.06
136 137 0.394192 CTAGAAGGGCGATCCATGCA 59.606 55.000 0.00 0.00 38.24 3.96
137 138 1.002888 CTAGAAGGGCGATCCATGCAT 59.997 52.381 0.00 0.00 38.24 3.96
138 139 0.184451 AGAAGGGCGATCCATGCATT 59.816 50.000 0.00 0.00 38.24 3.56
139 140 1.035139 GAAGGGCGATCCATGCATTT 58.965 50.000 0.00 0.00 38.24 2.32
140 141 0.748450 AAGGGCGATCCATGCATTTG 59.252 50.000 0.00 0.00 38.24 2.32
141 142 0.106569 AGGGCGATCCATGCATTTGA 60.107 50.000 0.00 0.00 38.24 2.69
142 143 0.313043 GGGCGATCCATGCATTTGAG 59.687 55.000 0.00 0.00 35.00 3.02
143 144 1.027357 GGCGATCCATGCATTTGAGT 58.973 50.000 0.00 0.00 0.00 3.41
144 145 1.268896 GGCGATCCATGCATTTGAGTG 60.269 52.381 0.00 0.00 0.00 3.51
145 146 1.268896 GCGATCCATGCATTTGAGTGG 60.269 52.381 0.00 0.00 0.00 4.00
146 147 1.268896 CGATCCATGCATTTGAGTGGC 60.269 52.381 0.00 0.00 0.00 5.01
147 148 2.029623 GATCCATGCATTTGAGTGGCT 58.970 47.619 0.00 0.00 0.00 4.75
148 149 2.804986 TCCATGCATTTGAGTGGCTA 57.195 45.000 0.00 0.00 0.00 3.93
149 150 2.646930 TCCATGCATTTGAGTGGCTAG 58.353 47.619 0.00 0.00 0.00 3.42
150 151 2.239402 TCCATGCATTTGAGTGGCTAGA 59.761 45.455 0.00 0.00 0.00 2.43
151 152 3.117776 TCCATGCATTTGAGTGGCTAGAT 60.118 43.478 0.00 0.00 0.00 1.98
152 153 3.635373 CCATGCATTTGAGTGGCTAGATT 59.365 43.478 0.00 0.00 0.00 2.40
153 154 4.098960 CCATGCATTTGAGTGGCTAGATTT 59.901 41.667 0.00 0.00 0.00 2.17
154 155 4.707030 TGCATTTGAGTGGCTAGATTTG 57.293 40.909 0.00 0.00 0.00 2.32
155 156 4.081406 TGCATTTGAGTGGCTAGATTTGT 58.919 39.130 0.00 0.00 0.00 2.83
156 157 4.523943 TGCATTTGAGTGGCTAGATTTGTT 59.476 37.500 0.00 0.00 0.00 2.83
157 158 4.860907 GCATTTGAGTGGCTAGATTTGTTG 59.139 41.667 0.00 0.00 0.00 3.33
158 159 5.565439 GCATTTGAGTGGCTAGATTTGTTGT 60.565 40.000 0.00 0.00 0.00 3.32
159 160 5.437289 TTTGAGTGGCTAGATTTGTTGTG 57.563 39.130 0.00 0.00 0.00 3.33
160 161 4.085357 TGAGTGGCTAGATTTGTTGTGT 57.915 40.909 0.00 0.00 0.00 3.72
161 162 3.814842 TGAGTGGCTAGATTTGTTGTGTG 59.185 43.478 0.00 0.00 0.00 3.82
162 163 3.149196 AGTGGCTAGATTTGTTGTGTGG 58.851 45.455 0.00 0.00 0.00 4.17
163 164 2.884639 GTGGCTAGATTTGTTGTGTGGT 59.115 45.455 0.00 0.00 0.00 4.16
164 165 4.069304 GTGGCTAGATTTGTTGTGTGGTA 58.931 43.478 0.00 0.00 0.00 3.25
165 166 4.700213 GTGGCTAGATTTGTTGTGTGGTAT 59.300 41.667 0.00 0.00 0.00 2.73
166 167 5.878116 GTGGCTAGATTTGTTGTGTGGTATA 59.122 40.000 0.00 0.00 0.00 1.47
167 168 5.878116 TGGCTAGATTTGTTGTGTGGTATAC 59.122 40.000 0.00 0.00 0.00 1.47
168 169 5.878116 GGCTAGATTTGTTGTGTGGTATACA 59.122 40.000 5.01 0.00 36.82 2.29
169 170 6.542370 GGCTAGATTTGTTGTGTGGTATACAT 59.458 38.462 5.01 0.00 42.24 2.29
170 171 7.067008 GGCTAGATTTGTTGTGTGGTATACATT 59.933 37.037 5.01 0.00 42.24 2.71
171 172 8.458843 GCTAGATTTGTTGTGTGGTATACATTT 58.541 33.333 5.01 0.00 42.24 2.32
172 173 9.773328 CTAGATTTGTTGTGTGGTATACATTTG 57.227 33.333 5.01 0.00 42.24 2.32
173 174 8.177119 AGATTTGTTGTGTGGTATACATTTGT 57.823 30.769 5.01 0.00 42.24 2.83
174 175 8.081633 AGATTTGTTGTGTGGTATACATTTGTG 58.918 33.333 5.01 0.00 42.24 3.33
175 176 6.701145 TTGTTGTGTGGTATACATTTGTGT 57.299 33.333 5.01 0.00 42.24 3.72
176 177 6.701145 TGTTGTGTGGTATACATTTGTGTT 57.299 33.333 5.01 0.00 42.24 3.32
177 178 6.730175 TGTTGTGTGGTATACATTTGTGTTC 58.270 36.000 5.01 0.00 42.24 3.18
178 179 6.544197 TGTTGTGTGGTATACATTTGTGTTCT 59.456 34.615 5.01 0.00 42.24 3.01
179 180 7.067615 TGTTGTGTGGTATACATTTGTGTTCTT 59.932 33.333 5.01 0.00 42.24 2.52
180 181 7.575414 TGTGTGGTATACATTTGTGTTCTTT 57.425 32.000 5.01 0.00 42.24 2.52
181 182 8.001881 TGTGTGGTATACATTTGTGTTCTTTT 57.998 30.769 5.01 0.00 42.24 2.27
182 183 8.470805 TGTGTGGTATACATTTGTGTTCTTTTT 58.529 29.630 5.01 0.00 42.24 1.94
183 184 8.964150 GTGTGGTATACATTTGTGTTCTTTTTC 58.036 33.333 5.01 0.00 42.24 2.29
184 185 8.908903 TGTGGTATACATTTGTGTTCTTTTTCT 58.091 29.630 5.01 0.00 33.42 2.52
197 198 9.834628 TGTGTTCTTTTTCTACTAAAACAACAG 57.165 29.630 0.00 0.00 36.92 3.16
198 199 9.836076 GTGTTCTTTTTCTACTAAAACAACAGT 57.164 29.630 0.00 0.00 36.92 3.55
234 235 5.336690 GGTGTGTTGTTATGGCATTTCAGAT 60.337 40.000 4.78 0.00 0.00 2.90
235 236 6.158598 GTGTGTTGTTATGGCATTTCAGATT 58.841 36.000 4.78 0.00 0.00 2.40
291 292 6.442513 AGACTTTGTATTATTTCCTGCAGC 57.557 37.500 8.66 0.00 0.00 5.25
358 359 4.504461 CCACATGCTAGAGTTTCGTATGAC 59.496 45.833 0.00 0.00 0.00 3.06
370 371 7.489757 AGAGTTTCGTATGACTTTAGCATCTTC 59.510 37.037 0.00 0.00 0.00 2.87
371 372 6.535508 AGTTTCGTATGACTTTAGCATCTTCC 59.464 38.462 0.00 0.00 0.00 3.46
373 374 6.222038 TCGTATGACTTTAGCATCTTCCTT 57.778 37.500 0.00 0.00 0.00 3.36
374 375 6.640518 TCGTATGACTTTAGCATCTTCCTTT 58.359 36.000 0.00 0.00 0.00 3.11
375 376 7.103641 TCGTATGACTTTAGCATCTTCCTTTT 58.896 34.615 0.00 0.00 0.00 2.27
376 377 7.606456 TCGTATGACTTTAGCATCTTCCTTTTT 59.394 33.333 0.00 0.00 0.00 1.94
419 420 3.181479 ACAGAAAGTAACTCACGTGCAGA 60.181 43.478 11.67 0.00 0.00 4.26
566 568 9.896645 GTGTGAACATATATTCCATCCAGATAT 57.103 33.333 0.00 0.00 0.00 1.63
616 618 8.718102 TTGATACAAATAGTCTCAACTTAGCC 57.282 34.615 0.00 0.00 38.11 3.93
630 632 0.320073 TTAGCCAGGGAACGACAACG 60.320 55.000 0.00 0.00 45.75 4.10
642 770 3.308438 ACGACAACGCTAGGTACAAAT 57.692 42.857 0.00 0.00 43.96 2.32
652 780 5.418209 ACGCTAGGTACAAATAGTCTCAACT 59.582 40.000 0.00 0.00 39.66 3.16
656 784 7.435784 GCTAGGTACAAATAGTCTCAACTTAGC 59.564 40.741 0.00 0.00 35.16 3.09
660 788 9.303537 GGTACAAATAGTCTCAACTTAGCTAAG 57.696 37.037 28.16 28.16 36.92 2.18
665 793 4.815269 AGTCTCAACTTAGCTAAGTGCAG 58.185 43.478 33.97 29.31 45.17 4.41
682 810 4.411540 AGTGCAGATACCTTGGAATCTCAT 59.588 41.667 0.00 0.00 29.93 2.90
714 842 4.574674 ATTGAGAAATGTCTGCACCCTA 57.425 40.909 0.00 0.00 32.80 3.53
795 924 3.120923 GGCTCGCAAACAAAATTGTGATG 60.121 43.478 1.62 2.41 45.68 3.07
827 957 5.006261 GGCATTTAATCGCCCAAATTTACAC 59.994 40.000 4.64 0.00 42.82 2.90
891 1021 4.536364 AATCGGACTGAATTAACATGCG 57.464 40.909 0.00 0.00 0.00 4.73
944 1074 5.073144 TGTTCCTTGGGCTCTATATAAAGGG 59.927 44.000 8.22 0.00 35.84 3.95
984 1131 1.000607 GCACAGAGACGTACAGGTTGA 60.001 52.381 0.00 0.00 0.00 3.18
1053 1200 1.302033 CTTGCAGGTCCTGTCGCTT 60.302 57.895 20.24 0.00 33.43 4.68
1173 7384 1.153628 CTTCCTCCACGGTAAGGCG 60.154 63.158 4.30 0.00 32.37 5.52
1176 7387 4.157120 CTCCACGGTAAGGCGGGG 62.157 72.222 0.00 0.00 0.00 5.73
1488 7699 3.289062 TGCGACTCGGTGAACGGA 61.289 61.111 0.00 0.00 44.45 4.69
1584 7795 1.330655 TGGGGCTCAAGGAGTCGATC 61.331 60.000 0.00 0.00 34.76 3.69
1590 7801 0.323999 TCAAGGAGTCGATCGGGGAA 60.324 55.000 16.41 0.00 0.00 3.97
1709 7923 0.105039 CTACTCTTGGCGGTGGATCC 59.895 60.000 4.20 4.20 0.00 3.36
1744 7958 4.506758 TCTAACTAAATAAGCCGCCGTTT 58.493 39.130 0.00 0.00 0.00 3.60
1753 7967 1.010419 AGCCGCCGTTTACGTACTTG 61.010 55.000 0.00 0.00 37.74 3.16
1754 7968 1.008361 GCCGCCGTTTACGTACTTGA 61.008 55.000 0.00 0.00 37.74 3.02
1755 7969 1.632422 CCGCCGTTTACGTACTTGAT 58.368 50.000 0.00 0.00 37.74 2.57
1756 7970 1.322338 CCGCCGTTTACGTACTTGATG 59.678 52.381 0.00 0.00 37.74 3.07
1757 7971 1.987770 CGCCGTTTACGTACTTGATGT 59.012 47.619 0.00 0.00 37.74 3.06
1761 7975 4.842376 GCCGTTTACGTACTTGATGTTTTC 59.158 41.667 0.00 0.00 37.74 2.29
1781 7995 9.959749 TGTTTTCTCAGGTTTATGTATTTTGTC 57.040 29.630 0.00 0.00 0.00 3.18
1782 7996 9.959749 GTTTTCTCAGGTTTATGTATTTTGTCA 57.040 29.630 0.00 0.00 0.00 3.58
1787 8001 9.912634 CTCAGGTTTATGTATTTTGTCATTGTT 57.087 29.630 0.00 0.00 0.00 2.83
1790 8004 9.405587 AGGTTTATGTATTTTGTCATTGTTTCG 57.594 29.630 0.00 0.00 0.00 3.46
1795 8009 6.676950 TGTATTTTGTCATTGTTTCGATGCT 58.323 32.000 0.00 0.00 0.00 3.79
1796 8010 7.811653 TGTATTTTGTCATTGTTTCGATGCTA 58.188 30.769 0.00 0.00 0.00 3.49
1797 8011 7.962373 TGTATTTTGTCATTGTTTCGATGCTAG 59.038 33.333 0.00 0.00 0.00 3.42
1798 8012 5.940192 TTTGTCATTGTTTCGATGCTAGT 57.060 34.783 0.00 0.00 0.00 2.57
1799 8013 7.428282 TTTTGTCATTGTTTCGATGCTAGTA 57.572 32.000 0.00 0.00 0.00 1.82
1800 8014 7.609760 TTTGTCATTGTTTCGATGCTAGTAT 57.390 32.000 0.00 0.00 0.00 2.12
1801 8015 7.609760 TTGTCATTGTTTCGATGCTAGTATT 57.390 32.000 0.00 0.00 0.00 1.89
1802 8016 8.710835 TTGTCATTGTTTCGATGCTAGTATTA 57.289 30.769 0.00 0.00 0.00 0.98
1803 8017 8.126871 TGTCATTGTTTCGATGCTAGTATTAC 57.873 34.615 0.00 0.00 0.00 1.89
1804 8018 7.979537 TGTCATTGTTTCGATGCTAGTATTACT 59.020 33.333 1.30 1.30 0.00 2.24
1805 8019 8.269424 GTCATTGTTTCGATGCTAGTATTACTG 58.731 37.037 6.60 0.00 0.00 2.74
1806 8020 7.438160 TCATTGTTTCGATGCTAGTATTACTGG 59.562 37.037 6.60 4.74 0.00 4.00
1849 8063 4.342772 CGGAGCGACAAAAGAAATTATGG 58.657 43.478 0.00 0.00 0.00 2.74
1850 8064 4.142687 CGGAGCGACAAAAGAAATTATGGT 60.143 41.667 0.00 0.00 0.00 3.55
1851 8065 5.619086 CGGAGCGACAAAAGAAATTATGGTT 60.619 40.000 0.00 0.00 0.00 3.67
1852 8066 6.402766 CGGAGCGACAAAAGAAATTATGGTTA 60.403 38.462 0.00 0.00 0.00 2.85
1853 8067 7.480810 GGAGCGACAAAAGAAATTATGGTTAT 58.519 34.615 0.00 0.00 0.00 1.89
1854 8068 7.432252 GGAGCGACAAAAGAAATTATGGTTATG 59.568 37.037 0.00 0.00 0.00 1.90
1855 8069 7.826690 AGCGACAAAAGAAATTATGGTTATGT 58.173 30.769 0.00 0.00 0.00 2.29
1856 8070 8.952278 AGCGACAAAAGAAATTATGGTTATGTA 58.048 29.630 0.00 0.00 0.00 2.29
1857 8071 9.562583 GCGACAAAAGAAATTATGGTTATGTAA 57.437 29.630 0.00 0.00 0.00 2.41
1866 8080 9.950680 GAAATTATGGTTATGTAACTGATGTGG 57.049 33.333 3.22 0.00 36.47 4.17
1867 8081 9.474313 AAATTATGGTTATGTAACTGATGTGGT 57.526 29.630 3.22 0.00 36.47 4.16
1868 8082 9.474313 AATTATGGTTATGTAACTGATGTGGTT 57.526 29.630 3.22 0.00 36.47 3.67
1869 8083 8.500753 TTATGGTTATGTAACTGATGTGGTTC 57.499 34.615 3.22 0.00 36.47 3.62
1870 8084 5.870706 TGGTTATGTAACTGATGTGGTTCA 58.129 37.500 3.22 0.00 36.47 3.18
1871 8085 5.703592 TGGTTATGTAACTGATGTGGTTCAC 59.296 40.000 3.22 0.00 36.47 3.18
1872 8086 5.163893 GGTTATGTAACTGATGTGGTTCACG 60.164 44.000 3.22 0.00 35.44 4.35
1873 8087 3.462483 TGTAACTGATGTGGTTCACGT 57.538 42.857 0.00 0.00 37.14 4.49
1874 8088 3.127589 TGTAACTGATGTGGTTCACGTG 58.872 45.455 9.94 9.94 37.14 4.49
1875 8089 2.325583 AACTGATGTGGTTCACGTGT 57.674 45.000 16.51 0.00 37.14 4.49
1876 8090 2.325583 ACTGATGTGGTTCACGTGTT 57.674 45.000 16.51 0.00 37.14 3.32
1877 8091 3.462483 ACTGATGTGGTTCACGTGTTA 57.538 42.857 16.51 1.96 37.14 2.41
1878 8092 3.799366 ACTGATGTGGTTCACGTGTTAA 58.201 40.909 16.51 0.00 37.14 2.01
1879 8093 4.385825 ACTGATGTGGTTCACGTGTTAAT 58.614 39.130 16.51 2.27 37.14 1.40
1880 8094 4.451096 ACTGATGTGGTTCACGTGTTAATC 59.549 41.667 16.51 4.26 37.14 1.75
1881 8095 4.381411 TGATGTGGTTCACGTGTTAATCA 58.619 39.130 16.51 7.16 37.14 2.57
1882 8096 4.212425 TGATGTGGTTCACGTGTTAATCAC 59.788 41.667 20.70 20.70 43.03 3.06
1883 8097 3.799366 TGTGGTTCACGTGTTAATCACT 58.201 40.909 25.07 0.00 44.16 3.41
1884 8098 3.805422 TGTGGTTCACGTGTTAATCACTC 59.195 43.478 25.07 8.64 44.16 3.51
1885 8099 4.056050 GTGGTTCACGTGTTAATCACTCT 58.944 43.478 20.38 0.00 44.16 3.24
1886 8100 4.055360 TGGTTCACGTGTTAATCACTCTG 58.945 43.478 16.51 0.00 44.16 3.35
1887 8101 4.202172 TGGTTCACGTGTTAATCACTCTGA 60.202 41.667 16.51 0.00 44.16 3.27
1888 8102 4.150098 GGTTCACGTGTTAATCACTCTGAC 59.850 45.833 16.51 0.00 44.16 3.51
1889 8103 3.561503 TCACGTGTTAATCACTCTGACG 58.438 45.455 16.51 0.00 44.16 4.35
1890 8104 3.004002 TCACGTGTTAATCACTCTGACGT 59.996 43.478 16.51 0.00 44.16 4.34
1891 8105 3.361053 CACGTGTTAATCACTCTGACGTC 59.639 47.826 9.11 9.11 44.16 4.34
1892 8106 3.252701 ACGTGTTAATCACTCTGACGTCT 59.747 43.478 17.92 0.00 44.16 4.18
1893 8107 4.453478 ACGTGTTAATCACTCTGACGTCTA 59.547 41.667 17.92 4.01 44.16 2.59
1894 8108 5.123502 ACGTGTTAATCACTCTGACGTCTAT 59.876 40.000 17.92 0.00 44.16 1.98
1895 8109 6.028368 CGTGTTAATCACTCTGACGTCTATT 58.972 40.000 17.92 9.03 44.16 1.73
1896 8110 6.194876 CGTGTTAATCACTCTGACGTCTATTC 59.805 42.308 17.92 0.00 44.16 1.75
1897 8111 7.251994 GTGTTAATCACTCTGACGTCTATTCT 58.748 38.462 17.92 0.00 43.13 2.40
1898 8112 8.396390 GTGTTAATCACTCTGACGTCTATTCTA 58.604 37.037 17.92 0.00 43.13 2.10
1899 8113 8.396390 TGTTAATCACTCTGACGTCTATTCTAC 58.604 37.037 17.92 8.83 0.00 2.59
1900 8114 8.614346 GTTAATCACTCTGACGTCTATTCTACT 58.386 37.037 17.92 0.00 0.00 2.57
1901 8115 6.854496 ATCACTCTGACGTCTATTCTACTC 57.146 41.667 17.92 0.00 0.00 2.59
1902 8116 5.117584 TCACTCTGACGTCTATTCTACTCC 58.882 45.833 17.92 0.00 0.00 3.85
1903 8117 4.273969 CACTCTGACGTCTATTCTACTCCC 59.726 50.000 17.92 0.00 0.00 4.30
1904 8118 4.164604 ACTCTGACGTCTATTCTACTCCCT 59.835 45.833 17.92 0.00 0.00 4.20
1905 8119 4.706035 TCTGACGTCTATTCTACTCCCTC 58.294 47.826 17.92 0.00 0.00 4.30
1906 8120 4.409574 TCTGACGTCTATTCTACTCCCTCT 59.590 45.833 17.92 0.00 0.00 3.69
1907 8121 4.452825 TGACGTCTATTCTACTCCCTCTG 58.547 47.826 17.92 0.00 0.00 3.35
1908 8122 4.080469 TGACGTCTATTCTACTCCCTCTGT 60.080 45.833 17.92 0.00 0.00 3.41
1909 8123 4.453751 ACGTCTATTCTACTCCCTCTGTC 58.546 47.826 0.00 0.00 0.00 3.51
1910 8124 4.164604 ACGTCTATTCTACTCCCTCTGTCT 59.835 45.833 0.00 0.00 0.00 3.41
1911 8125 4.753107 CGTCTATTCTACTCCCTCTGTCTC 59.247 50.000 0.00 0.00 0.00 3.36
1912 8126 5.685337 CGTCTATTCTACTCCCTCTGTCTCA 60.685 48.000 0.00 0.00 0.00 3.27
1913 8127 6.123651 GTCTATTCTACTCCCTCTGTCTCAA 58.876 44.000 0.00 0.00 0.00 3.02
1914 8128 6.603997 GTCTATTCTACTCCCTCTGTCTCAAA 59.396 42.308 0.00 0.00 0.00 2.69
1915 8129 7.122948 GTCTATTCTACTCCCTCTGTCTCAAAA 59.877 40.741 0.00 0.00 0.00 2.44
1916 8130 6.882768 ATTCTACTCCCTCTGTCTCAAAAT 57.117 37.500 0.00 0.00 0.00 1.82
1917 8131 7.979786 ATTCTACTCCCTCTGTCTCAAAATA 57.020 36.000 0.00 0.00 0.00 1.40
1918 8132 7.979786 TTCTACTCCCTCTGTCTCAAAATAT 57.020 36.000 0.00 0.00 0.00 1.28
1919 8133 9.661954 ATTCTACTCCCTCTGTCTCAAAATATA 57.338 33.333 0.00 0.00 0.00 0.86
1920 8134 9.488762 TTCTACTCCCTCTGTCTCAAAATATAA 57.511 33.333 0.00 0.00 0.00 0.98
1921 8135 9.137459 TCTACTCCCTCTGTCTCAAAATATAAG 57.863 37.037 0.00 0.00 0.00 1.73
1922 8136 7.979786 ACTCCCTCTGTCTCAAAATATAAGA 57.020 36.000 0.00 0.00 0.00 2.10
1923 8137 8.380742 ACTCCCTCTGTCTCAAAATATAAGAA 57.619 34.615 0.00 0.00 0.00 2.52
1924 8138 8.261522 ACTCCCTCTGTCTCAAAATATAAGAAC 58.738 37.037 0.00 0.00 0.00 3.01
1925 8139 7.265673 TCCCTCTGTCTCAAAATATAAGAACG 58.734 38.462 0.00 0.00 0.00 3.95
1926 8140 7.042335 CCCTCTGTCTCAAAATATAAGAACGT 58.958 38.462 0.00 0.00 0.00 3.99
1927 8141 7.549488 CCCTCTGTCTCAAAATATAAGAACGTT 59.451 37.037 0.00 0.00 0.00 3.99
1928 8142 8.936864 CCTCTGTCTCAAAATATAAGAACGTTT 58.063 33.333 0.46 0.00 0.00 3.60
1972 8186 8.753175 TGAAAAACGTTTTTATATTTTGGGACG 58.247 29.630 32.57 0.00 40.21 4.79
1973 8187 7.640616 AAAACGTTTTTATATTTTGGGACGG 57.359 32.000 20.26 0.00 33.95 4.79
1974 8188 6.572167 AACGTTTTTATATTTTGGGACGGA 57.428 33.333 0.00 0.00 33.95 4.69
1975 8189 6.185852 ACGTTTTTATATTTTGGGACGGAG 57.814 37.500 0.00 0.00 33.95 4.63
1976 8190 5.124297 ACGTTTTTATATTTTGGGACGGAGG 59.876 40.000 0.00 0.00 33.95 4.30
1977 8191 5.449451 CGTTTTTATATTTTGGGACGGAGGG 60.449 44.000 0.00 0.00 0.00 4.30
1978 8192 5.453866 TTTTATATTTTGGGACGGAGGGA 57.546 39.130 0.00 0.00 0.00 4.20
1979 8193 4.699925 TTATATTTTGGGACGGAGGGAG 57.300 45.455 0.00 0.00 0.00 4.30
1980 8194 0.544697 TATTTTGGGACGGAGGGAGC 59.455 55.000 0.00 0.00 0.00 4.70
1981 8195 1.497309 ATTTTGGGACGGAGGGAGCA 61.497 55.000 0.00 0.00 0.00 4.26
1982 8196 2.406002 TTTTGGGACGGAGGGAGCAC 62.406 60.000 0.00 0.00 0.00 4.40
1985 8199 3.319198 GGACGGAGGGAGCACCAA 61.319 66.667 1.58 0.00 43.89 3.67
1986 8200 2.747686 GACGGAGGGAGCACCAAA 59.252 61.111 1.58 0.00 43.89 3.28
1987 8201 1.299976 GACGGAGGGAGCACCAAAT 59.700 57.895 1.58 0.00 43.89 2.32
1988 8202 0.539986 GACGGAGGGAGCACCAAATA 59.460 55.000 1.58 0.00 43.89 1.40
1989 8203 0.252197 ACGGAGGGAGCACCAAATAC 59.748 55.000 1.58 0.00 43.89 1.89
1990 8204 0.463833 CGGAGGGAGCACCAAATACC 60.464 60.000 1.58 0.00 43.89 2.73
1991 8205 0.623723 GGAGGGAGCACCAAATACCA 59.376 55.000 1.58 0.00 43.89 3.25
1992 8206 1.682087 GGAGGGAGCACCAAATACCAC 60.682 57.143 1.58 0.00 43.89 4.16
1993 8207 0.331616 AGGGAGCACCAAATACCACC 59.668 55.000 1.58 0.00 43.89 4.61
1994 8208 0.331616 GGGAGCACCAAATACCACCT 59.668 55.000 1.58 0.00 39.85 4.00
1995 8209 1.272480 GGGAGCACCAAATACCACCTT 60.272 52.381 1.58 0.00 39.85 3.50
1996 8210 1.818674 GGAGCACCAAATACCACCTTG 59.181 52.381 0.00 0.00 35.97 3.61
1997 8211 2.514803 GAGCACCAAATACCACCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1998 8212 2.890945 GAGCACCAAATACCACCTTGTT 59.109 45.455 0.00 0.00 0.00 2.83
1999 8213 2.890945 AGCACCAAATACCACCTTGTTC 59.109 45.455 0.00 0.00 0.00 3.18
2000 8214 2.890945 GCACCAAATACCACCTTGTTCT 59.109 45.455 0.00 0.00 0.00 3.01
2001 8215 3.057526 GCACCAAATACCACCTTGTTCTC 60.058 47.826 0.00 0.00 0.00 2.87
2002 8216 3.506067 CACCAAATACCACCTTGTTCTCC 59.494 47.826 0.00 0.00 0.00 3.71
2003 8217 3.089284 CCAAATACCACCTTGTTCTCCC 58.911 50.000 0.00 0.00 0.00 4.30
2004 8218 2.747446 CAAATACCACCTTGTTCTCCCG 59.253 50.000 0.00 0.00 0.00 5.14
2005 8219 1.946984 ATACCACCTTGTTCTCCCGA 58.053 50.000 0.00 0.00 0.00 5.14
2006 8220 1.946984 TACCACCTTGTTCTCCCGAT 58.053 50.000 0.00 0.00 0.00 4.18
2007 8221 0.324943 ACCACCTTGTTCTCCCGATG 59.675 55.000 0.00 0.00 0.00 3.84
2008 8222 0.613260 CCACCTTGTTCTCCCGATGA 59.387 55.000 0.00 0.00 0.00 2.92
2009 8223 1.406069 CCACCTTGTTCTCCCGATGAG 60.406 57.143 0.00 0.00 42.90 2.90
2010 8224 1.276421 CACCTTGTTCTCCCGATGAGT 59.724 52.381 2.48 0.00 42.12 3.41
2011 8225 1.978580 ACCTTGTTCTCCCGATGAGTT 59.021 47.619 2.48 0.00 42.12 3.01
2012 8226 3.056107 CACCTTGTTCTCCCGATGAGTTA 60.056 47.826 2.48 0.00 42.12 2.24
2013 8227 3.581332 ACCTTGTTCTCCCGATGAGTTAA 59.419 43.478 2.48 0.00 42.12 2.01
2014 8228 4.041198 ACCTTGTTCTCCCGATGAGTTAAA 59.959 41.667 2.48 0.00 42.12 1.52
2015 8229 5.001232 CCTTGTTCTCCCGATGAGTTAAAA 58.999 41.667 2.48 0.00 42.12 1.52
2016 8230 5.472137 CCTTGTTCTCCCGATGAGTTAAAAA 59.528 40.000 2.48 0.00 42.12 1.94
2041 8255 3.356290 ACAACCTTGTTCTTGCTCTTGT 58.644 40.909 0.00 0.00 38.47 3.16
2042 8256 3.378427 ACAACCTTGTTCTTGCTCTTGTC 59.622 43.478 0.00 0.00 38.47 3.18
2043 8257 3.281727 ACCTTGTTCTTGCTCTTGTCA 57.718 42.857 0.00 0.00 0.00 3.58
2044 8258 2.945668 ACCTTGTTCTTGCTCTTGTCAC 59.054 45.455 0.00 0.00 0.00 3.67
2045 8259 2.291741 CCTTGTTCTTGCTCTTGTCACC 59.708 50.000 0.00 0.00 0.00 4.02
2046 8260 2.708216 TGTTCTTGCTCTTGTCACCA 57.292 45.000 0.00 0.00 0.00 4.17
2047 8261 3.213206 TGTTCTTGCTCTTGTCACCAT 57.787 42.857 0.00 0.00 0.00 3.55
2048 8262 2.880268 TGTTCTTGCTCTTGTCACCATG 59.120 45.455 0.00 0.00 0.00 3.66
2049 8263 1.527034 TCTTGCTCTTGTCACCATGC 58.473 50.000 0.00 0.00 0.00 4.06
2050 8264 1.202794 TCTTGCTCTTGTCACCATGCA 60.203 47.619 0.00 0.00 0.00 3.96
2051 8265 1.816835 CTTGCTCTTGTCACCATGCAT 59.183 47.619 0.00 0.00 0.00 3.96
2052 8266 1.456296 TGCTCTTGTCACCATGCATC 58.544 50.000 0.00 0.00 0.00 3.91
2053 8267 1.003928 TGCTCTTGTCACCATGCATCT 59.996 47.619 0.00 0.00 0.00 2.90
2054 8268 1.669779 GCTCTTGTCACCATGCATCTC 59.330 52.381 0.00 0.00 0.00 2.75
2055 8269 2.286872 CTCTTGTCACCATGCATCTCC 58.713 52.381 0.00 0.00 0.00 3.71
2056 8270 1.911357 TCTTGTCACCATGCATCTCCT 59.089 47.619 0.00 0.00 0.00 3.69
2057 8271 2.306805 TCTTGTCACCATGCATCTCCTT 59.693 45.455 0.00 0.00 0.00 3.36
2058 8272 2.885135 TGTCACCATGCATCTCCTTT 57.115 45.000 0.00 0.00 0.00 3.11
2059 8273 2.715046 TGTCACCATGCATCTCCTTTC 58.285 47.619 0.00 0.00 0.00 2.62
2060 8274 2.019984 GTCACCATGCATCTCCTTTCC 58.980 52.381 0.00 0.00 0.00 3.13
2061 8275 1.918262 TCACCATGCATCTCCTTTCCT 59.082 47.619 0.00 0.00 0.00 3.36
2062 8276 2.092753 TCACCATGCATCTCCTTTCCTC 60.093 50.000 0.00 0.00 0.00 3.71
2063 8277 1.918262 ACCATGCATCTCCTTTCCTCA 59.082 47.619 0.00 0.00 0.00 3.86
2064 8278 2.309755 ACCATGCATCTCCTTTCCTCAA 59.690 45.455 0.00 0.00 0.00 3.02
2065 8279 3.053095 ACCATGCATCTCCTTTCCTCAAT 60.053 43.478 0.00 0.00 0.00 2.57
2066 8280 3.318275 CCATGCATCTCCTTTCCTCAATG 59.682 47.826 0.00 0.00 0.00 2.82
2067 8281 4.204799 CATGCATCTCCTTTCCTCAATGA 58.795 43.478 0.00 0.00 0.00 2.57
2068 8282 3.614092 TGCATCTCCTTTCCTCAATGAC 58.386 45.455 0.00 0.00 0.00 3.06
2069 8283 3.009363 TGCATCTCCTTTCCTCAATGACA 59.991 43.478 0.00 0.00 0.00 3.58
2070 8284 4.012374 GCATCTCCTTTCCTCAATGACAA 58.988 43.478 0.00 0.00 0.00 3.18
2071 8285 4.096081 GCATCTCCTTTCCTCAATGACAAG 59.904 45.833 0.00 0.00 0.00 3.16
2072 8286 4.982241 TCTCCTTTCCTCAATGACAAGT 57.018 40.909 0.00 0.00 0.00 3.16
2073 8287 5.310409 TCTCCTTTCCTCAATGACAAGTT 57.690 39.130 0.00 0.00 0.00 2.66
2074 8288 5.308825 TCTCCTTTCCTCAATGACAAGTTC 58.691 41.667 0.00 0.00 0.00 3.01
2075 8289 5.047566 TCCTTTCCTCAATGACAAGTTCA 57.952 39.130 0.00 0.00 39.11 3.18
2076 8290 4.821805 TCCTTTCCTCAATGACAAGTTCAC 59.178 41.667 0.00 0.00 36.92 3.18
2077 8291 4.580167 CCTTTCCTCAATGACAAGTTCACA 59.420 41.667 0.00 0.00 36.92 3.58
2078 8292 5.067674 CCTTTCCTCAATGACAAGTTCACAA 59.932 40.000 0.00 0.00 36.92 3.33
2079 8293 5.499139 TTCCTCAATGACAAGTTCACAAC 57.501 39.130 0.00 0.00 36.92 3.32
2080 8294 3.882888 TCCTCAATGACAAGTTCACAACC 59.117 43.478 0.00 0.00 36.92 3.77
2081 8295 3.004734 CCTCAATGACAAGTTCACAACCC 59.995 47.826 0.00 0.00 36.92 4.11
2082 8296 3.625853 TCAATGACAAGTTCACAACCCA 58.374 40.909 0.00 0.00 36.92 4.51
2083 8297 4.214310 TCAATGACAAGTTCACAACCCAT 58.786 39.130 0.00 0.00 36.92 4.00
2084 8298 5.380900 TCAATGACAAGTTCACAACCCATA 58.619 37.500 0.00 0.00 36.92 2.74
2085 8299 6.009589 TCAATGACAAGTTCACAACCCATAT 58.990 36.000 0.00 0.00 36.92 1.78
2086 8300 5.902613 ATGACAAGTTCACAACCCATATG 57.097 39.130 0.00 0.00 36.92 1.78
2087 8301 4.979335 TGACAAGTTCACAACCCATATGA 58.021 39.130 3.65 0.00 0.00 2.15
2096 8310 2.301346 CAACCCATATGACAAGGAGGC 58.699 52.381 3.65 0.00 0.00 4.70
2105 8319 0.107459 GACAAGGAGGCTGGGATGTC 60.107 60.000 0.00 0.00 0.00 3.06
2115 8329 2.146342 GCTGGGATGTCAATGATACGG 58.854 52.381 0.00 0.00 0.00 4.02
2121 8335 4.261197 GGGATGTCAATGATACGGAAAAGC 60.261 45.833 0.00 0.00 0.00 3.51
2122 8336 4.518217 GATGTCAATGATACGGAAAAGCG 58.482 43.478 0.00 0.00 0.00 4.68
2123 8337 2.675844 TGTCAATGATACGGAAAAGCGG 59.324 45.455 0.00 0.00 0.00 5.52
2129 8343 2.028294 TGATACGGAAAAGCGGTGGTAA 60.028 45.455 0.00 0.00 0.00 2.85
2137 8351 0.916809 AAGCGGTGGTAAGGGCTTAT 59.083 50.000 0.00 0.00 43.38 1.73
2149 8363 2.726821 AGGGCTTATGTGAATGTGGTG 58.273 47.619 0.00 0.00 0.00 4.17
2154 8368 4.941263 GGCTTATGTGAATGTGGTGTCTAA 59.059 41.667 0.00 0.00 0.00 2.10
2172 8386 7.229907 GGTGTCTAAGTTTTCCTTTTGACCATA 59.770 37.037 0.00 0.00 35.94 2.74
2175 8389 7.664318 GTCTAAGTTTTCCTTTTGACCATAGGA 59.336 37.037 0.00 0.00 36.31 2.94
2198 8412 9.349041 AGGAGGAAAAATATAGGATGATGAGAT 57.651 33.333 0.00 0.00 0.00 2.75
2220 8434 0.512952 CGAGAAACCTCAAGCAACCG 59.487 55.000 0.00 0.00 0.00 4.44
2225 8439 0.182775 AACCTCAAGCAACCGGTCTT 59.817 50.000 8.04 4.86 0.00 3.01
2229 8443 1.466167 CTCAAGCAACCGGTCTTCATG 59.534 52.381 8.04 2.43 0.00 3.07
2233 8447 0.798776 GCAACCGGTCTTCATGTCAG 59.201 55.000 8.04 0.00 0.00 3.51
2237 8451 1.336887 ACCGGTCTTCATGTCAGTTCG 60.337 52.381 0.00 0.20 0.00 3.95
2241 8455 2.744202 GGTCTTCATGTCAGTTCGCATT 59.256 45.455 0.00 0.00 0.00 3.56
2280 8494 2.584236 TCTAGTGATACGGGAGCTTCC 58.416 52.381 0.00 0.00 35.23 3.46
2297 8511 0.106868 TCCATGCTCCCATGCTTCAG 60.107 55.000 0.00 0.00 45.97 3.02
2308 8522 4.952704 GCTTCAGGAGCTCCTTCC 57.047 61.111 33.33 16.60 46.09 3.46
2310 8524 0.617935 GCTTCAGGAGCTCCTTCCTT 59.382 55.000 33.33 9.39 45.35 3.36
2311 8525 1.406751 GCTTCAGGAGCTCCTTCCTTC 60.407 57.143 33.33 16.50 45.35 3.46
2313 8527 1.270907 TCAGGAGCTCCTTCCTTCAC 58.729 55.000 33.33 2.27 45.35 3.18
2314 8528 1.203237 TCAGGAGCTCCTTCCTTCACT 60.203 52.381 33.33 5.98 45.35 3.41
2315 8529 1.066286 CAGGAGCTCCTTCCTTCACTG 60.066 57.143 33.33 15.23 45.35 3.66
2316 8530 0.980423 GGAGCTCCTTCCTTCACTGT 59.020 55.000 26.25 0.00 34.27 3.55
2319 8533 2.167487 GAGCTCCTTCCTTCACTGTAGG 59.833 54.545 0.87 0.00 0.00 3.18
2352 8566 1.656652 TTGCTATGGAGAAAGCTCGC 58.343 50.000 0.00 0.00 42.25 5.03
2365 8579 2.697431 AGCTCGCGCAAAATTGTTAA 57.303 40.000 8.75 0.00 39.10 2.01
2373 8587 5.062308 TCGCGCAAAATTGTTAACAAAAACT 59.938 32.000 23.97 5.75 39.55 2.66
2376 8590 6.521477 GCGCAAAATTGTTAACAAAAACTTGT 59.479 30.769 23.97 7.14 39.55 3.16
2383 8597 5.480205 TGTTAACAAAAACTTGTGAACCCC 58.520 37.500 5.64 0.00 42.81 4.95
2386 8600 4.200838 ACAAAAACTTGTGAACCCCTTG 57.799 40.909 0.00 0.00 33.23 3.61
2394 8608 2.364632 TGTGAACCCCTTGATTATGCG 58.635 47.619 0.00 0.00 0.00 4.73
2408 8622 0.613260 TATGCGCAACTCCCAAGTCT 59.387 50.000 17.11 0.00 33.48 3.24
2411 8625 1.294659 GCGCAACTCCCAAGTCTCTG 61.295 60.000 0.30 0.00 33.48 3.35
2413 8627 1.066573 CGCAACTCCCAAGTCTCTGAT 60.067 52.381 0.00 0.00 33.48 2.90
2420 8634 1.489649 CCCAAGTCTCTGATGATGGCT 59.510 52.381 0.00 0.00 0.00 4.75
2435 8649 0.468226 TGGCTATTGGGTCCACGATC 59.532 55.000 0.00 0.00 0.00 3.69
2441 8655 0.036164 TTGGGTCCACGATCCAACTG 59.964 55.000 2.15 0.00 44.42 3.16
2475 8689 2.836360 GCATGGGAGCATGGTGGG 60.836 66.667 0.00 0.00 33.41 4.61
2502 8716 1.082954 ACCCACTGCCACCCTAGAT 59.917 57.895 0.00 0.00 0.00 1.98
2515 8729 0.322975 CCTAGATCATGCCTTCCCCG 59.677 60.000 0.00 0.00 0.00 5.73
2520 8734 0.182775 ATCATGCCTTCCCCGTTACC 59.817 55.000 0.00 0.00 0.00 2.85
2522 8736 0.106719 CATGCCTTCCCCGTTACCAT 60.107 55.000 0.00 0.00 0.00 3.55
2524 8738 1.202099 TGCCTTCCCCGTTACCATCA 61.202 55.000 0.00 0.00 0.00 3.07
2530 8744 0.616371 CCCCGTTACCATCACCTCAA 59.384 55.000 0.00 0.00 0.00 3.02
2534 8748 3.343617 CCGTTACCATCACCTCAACATT 58.656 45.455 0.00 0.00 0.00 2.71
2537 8751 4.215399 CGTTACCATCACCTCAACATTTGT 59.785 41.667 0.00 0.00 0.00 2.83
2549 8763 6.041511 CCTCAACATTTGTCAACAACATCAA 58.958 36.000 0.00 0.00 37.82 2.57
2578 8792 4.686695 TCCCTCTGTCGATGGGAG 57.313 61.111 12.41 9.01 44.37 4.30
2579 8793 1.697910 TCCCTCTGTCGATGGGAGT 59.302 57.895 12.41 0.00 44.37 3.85
2580 8794 0.395862 TCCCTCTGTCGATGGGAGTC 60.396 60.000 12.41 0.00 44.37 3.36
2593 8807 1.168714 GGGAGTCAACATTGTCAGCC 58.831 55.000 0.00 0.00 0.00 4.85
2595 8809 2.440409 GGAGTCAACATTGTCAGCCAT 58.560 47.619 0.00 0.00 0.00 4.40
2606 8820 0.393537 GTCAGCCATCCTTGACAGGG 60.394 60.000 0.00 0.00 41.25 4.45
2607 8821 1.077212 CAGCCATCCTTGACAGGGG 60.077 63.158 3.41 0.00 41.25 4.79
2608 8822 1.229951 AGCCATCCTTGACAGGGGA 60.230 57.895 3.41 2.84 41.25 4.81
2609 8823 1.225704 GCCATCCTTGACAGGGGAG 59.774 63.158 3.41 0.00 41.25 4.30
2610 8824 1.918253 CCATCCTTGACAGGGGAGG 59.082 63.158 3.41 4.23 41.25 4.30
2611 8825 1.639635 CCATCCTTGACAGGGGAGGG 61.640 65.000 13.29 13.29 45.17 4.30
2612 8826 1.308216 ATCCTTGACAGGGGAGGGG 60.308 63.158 3.41 0.00 41.25 4.79
2613 8827 2.865183 ATCCTTGACAGGGGAGGGGG 62.865 65.000 3.41 0.00 41.25 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.448720 TCCATTGATCTTGCATGGAGAT 57.551 40.909 10.63 0.00 36.58 2.75
5 6 6.835819 ATATTCCATTGATCTTGCATGGAG 57.164 37.500 13.03 0.00 41.76 3.86
6 7 8.888836 ATTATATTCCATTGATCTTGCATGGA 57.111 30.769 10.63 10.63 39.42 3.41
32 33 9.790389 CTTAGACTTCGTTATGTCTTAGTCAAT 57.210 33.333 0.00 0.00 42.67 2.57
33 34 8.790718 ACTTAGACTTCGTTATGTCTTAGTCAA 58.209 33.333 8.39 0.00 44.57 3.18
34 35 8.332996 ACTTAGACTTCGTTATGTCTTAGTCA 57.667 34.615 8.39 0.00 44.57 3.41
37 38 7.635587 GTCGACTTAGACTTCGTTATGTCTTAG 59.364 40.741 8.70 0.00 42.67 2.18
38 39 7.459486 GTCGACTTAGACTTCGTTATGTCTTA 58.541 38.462 8.70 0.00 42.67 2.10
39 40 6.313252 GTCGACTTAGACTTCGTTATGTCTT 58.687 40.000 8.70 0.00 42.67 3.01
40 41 5.867166 GTCGACTTAGACTTCGTTATGTCT 58.133 41.667 8.70 0.00 44.56 3.41
57 58 3.060736 TCTGCTAAGTCTCAGTCGACT 57.939 47.619 13.58 13.58 45.73 4.18
58 59 3.189702 AGTTCTGCTAAGTCTCAGTCGAC 59.810 47.826 7.70 7.70 0.00 4.20
59 60 3.189495 CAGTTCTGCTAAGTCTCAGTCGA 59.811 47.826 0.00 0.00 0.00 4.20
60 61 3.189495 TCAGTTCTGCTAAGTCTCAGTCG 59.811 47.826 0.00 0.00 0.00 4.18
61 62 4.775058 TCAGTTCTGCTAAGTCTCAGTC 57.225 45.455 0.00 0.00 0.00 3.51
62 63 6.842437 TTATCAGTTCTGCTAAGTCTCAGT 57.158 37.500 0.00 0.00 0.00 3.41
63 64 8.539770 TTTTTATCAGTTCTGCTAAGTCTCAG 57.460 34.615 0.00 0.00 0.00 3.35
101 102 8.142551 CGCCCTTCTAGTTTATACTCTACATTT 58.857 37.037 0.00 0.00 35.78 2.32
102 103 7.504911 TCGCCCTTCTAGTTTATACTCTACATT 59.495 37.037 0.00 0.00 35.78 2.71
103 104 7.002879 TCGCCCTTCTAGTTTATACTCTACAT 58.997 38.462 0.00 0.00 35.78 2.29
104 105 6.359804 TCGCCCTTCTAGTTTATACTCTACA 58.640 40.000 0.00 0.00 35.78 2.74
105 106 6.874288 TCGCCCTTCTAGTTTATACTCTAC 57.126 41.667 0.00 0.00 35.78 2.59
106 107 6.658391 GGATCGCCCTTCTAGTTTATACTCTA 59.342 42.308 0.00 0.00 35.78 2.43
107 108 5.477637 GGATCGCCCTTCTAGTTTATACTCT 59.522 44.000 0.00 0.00 35.78 3.24
108 109 5.243283 TGGATCGCCCTTCTAGTTTATACTC 59.757 44.000 0.00 0.00 34.14 2.59
109 110 5.145564 TGGATCGCCCTTCTAGTTTATACT 58.854 41.667 0.00 0.00 35.60 2.12
110 111 5.464030 TGGATCGCCCTTCTAGTTTATAC 57.536 43.478 0.00 0.00 35.38 1.47
111 112 5.568825 GCATGGATCGCCCTTCTAGTTTATA 60.569 44.000 0.00 0.00 35.38 0.98
112 113 4.804261 GCATGGATCGCCCTTCTAGTTTAT 60.804 45.833 0.00 0.00 35.38 1.40
113 114 3.494398 GCATGGATCGCCCTTCTAGTTTA 60.494 47.826 0.00 0.00 35.38 2.01
114 115 2.746472 GCATGGATCGCCCTTCTAGTTT 60.746 50.000 0.00 0.00 35.38 2.66
115 116 1.202698 GCATGGATCGCCCTTCTAGTT 60.203 52.381 0.00 0.00 35.38 2.24
116 117 0.394565 GCATGGATCGCCCTTCTAGT 59.605 55.000 0.00 0.00 35.38 2.57
117 118 0.394192 TGCATGGATCGCCCTTCTAG 59.606 55.000 0.00 0.00 35.38 2.43
118 119 1.059098 ATGCATGGATCGCCCTTCTA 58.941 50.000 0.00 0.00 35.38 2.10
119 120 0.184451 AATGCATGGATCGCCCTTCT 59.816 50.000 0.00 0.00 35.38 2.85
120 121 1.035139 AAATGCATGGATCGCCCTTC 58.965 50.000 0.00 0.00 35.38 3.46
121 122 0.748450 CAAATGCATGGATCGCCCTT 59.252 50.000 0.00 0.00 35.38 3.95
122 123 0.106569 TCAAATGCATGGATCGCCCT 60.107 50.000 0.00 0.00 35.38 5.19
123 124 0.313043 CTCAAATGCATGGATCGCCC 59.687 55.000 0.00 0.00 0.00 6.13
124 125 1.027357 ACTCAAATGCATGGATCGCC 58.973 50.000 0.00 0.00 0.00 5.54
125 126 1.268896 CCACTCAAATGCATGGATCGC 60.269 52.381 0.00 0.00 33.80 4.58
126 127 1.268896 GCCACTCAAATGCATGGATCG 60.269 52.381 0.00 0.00 33.80 3.69
127 128 2.029623 AGCCACTCAAATGCATGGATC 58.970 47.619 0.00 0.00 33.80 3.36
128 129 2.154567 AGCCACTCAAATGCATGGAT 57.845 45.000 0.00 0.00 33.80 3.41
129 130 2.239402 TCTAGCCACTCAAATGCATGGA 59.761 45.455 0.00 0.00 33.80 3.41
130 131 2.646930 TCTAGCCACTCAAATGCATGG 58.353 47.619 0.00 0.00 35.17 3.66
131 132 4.913335 AATCTAGCCACTCAAATGCATG 57.087 40.909 0.00 0.00 0.00 4.06
132 133 4.708421 ACAAATCTAGCCACTCAAATGCAT 59.292 37.500 0.00 0.00 0.00 3.96
133 134 4.081406 ACAAATCTAGCCACTCAAATGCA 58.919 39.130 0.00 0.00 0.00 3.96
134 135 4.708726 ACAAATCTAGCCACTCAAATGC 57.291 40.909 0.00 0.00 0.00 3.56
135 136 5.860182 CACAACAAATCTAGCCACTCAAATG 59.140 40.000 0.00 0.00 0.00 2.32
136 137 5.536161 ACACAACAAATCTAGCCACTCAAAT 59.464 36.000 0.00 0.00 0.00 2.32
137 138 4.887071 ACACAACAAATCTAGCCACTCAAA 59.113 37.500 0.00 0.00 0.00 2.69
138 139 4.275689 CACACAACAAATCTAGCCACTCAA 59.724 41.667 0.00 0.00 0.00 3.02
139 140 3.814842 CACACAACAAATCTAGCCACTCA 59.185 43.478 0.00 0.00 0.00 3.41
140 141 3.189287 CCACACAACAAATCTAGCCACTC 59.811 47.826 0.00 0.00 0.00 3.51
141 142 3.149196 CCACACAACAAATCTAGCCACT 58.851 45.455 0.00 0.00 0.00 4.00
142 143 2.884639 ACCACACAACAAATCTAGCCAC 59.115 45.455 0.00 0.00 0.00 5.01
143 144 3.222173 ACCACACAACAAATCTAGCCA 57.778 42.857 0.00 0.00 0.00 4.75
144 145 5.878116 TGTATACCACACAACAAATCTAGCC 59.122 40.000 0.00 0.00 30.04 3.93
145 146 6.978343 TGTATACCACACAACAAATCTAGC 57.022 37.500 0.00 0.00 30.04 3.42
146 147 9.773328 CAAATGTATACCACACAACAAATCTAG 57.227 33.333 0.00 0.00 40.86 2.43
147 148 9.290988 ACAAATGTATACCACACAACAAATCTA 57.709 29.630 0.00 0.00 40.86 1.98
148 149 8.081633 CACAAATGTATACCACACAACAAATCT 58.918 33.333 0.00 0.00 40.86 2.40
149 150 7.865385 ACACAAATGTATACCACACAACAAATC 59.135 33.333 0.00 0.00 40.86 2.17
150 151 7.721402 ACACAAATGTATACCACACAACAAAT 58.279 30.769 0.00 0.00 40.86 2.32
151 152 7.101652 ACACAAATGTATACCACACAACAAA 57.898 32.000 0.00 0.00 40.86 2.83
152 153 6.701145 ACACAAATGTATACCACACAACAA 57.299 33.333 0.00 0.00 40.86 2.83
153 154 6.544197 AGAACACAAATGTATACCACACAACA 59.456 34.615 0.00 0.00 40.86 3.33
154 155 6.966021 AGAACACAAATGTATACCACACAAC 58.034 36.000 0.00 0.00 40.86 3.32
155 156 7.575414 AAGAACACAAATGTATACCACACAA 57.425 32.000 0.00 0.00 40.86 3.33
156 157 7.575414 AAAGAACACAAATGTATACCACACA 57.425 32.000 0.00 0.00 40.86 3.72
157 158 8.865590 AAAAAGAACACAAATGTATACCACAC 57.134 30.769 0.00 0.00 40.86 3.82
158 159 8.908903 AGAAAAAGAACACAAATGTATACCACA 58.091 29.630 0.00 0.00 38.45 4.17
188 189 8.308207 ACACCAGTATGTTAAAACTGTTGTTTT 58.692 29.630 9.74 10.93 44.04 2.43
189 190 7.757624 CACACCAGTATGTTAAAACTGTTGTTT 59.242 33.333 11.79 0.00 44.04 2.83
190 191 7.094118 ACACACCAGTATGTTAAAACTGTTGTT 60.094 33.333 11.79 4.93 44.04 2.83
191 192 6.376018 ACACACCAGTATGTTAAAACTGTTGT 59.624 34.615 9.74 9.74 46.38 3.32
192 193 6.791303 ACACACCAGTATGTTAAAACTGTTG 58.209 36.000 11.04 9.91 40.70 3.33
193 194 7.094118 ACAACACACCAGTATGTTAAAACTGTT 60.094 33.333 11.04 0.00 41.25 3.16
194 195 6.376018 ACAACACACCAGTATGTTAAAACTGT 59.624 34.615 11.04 0.00 41.25 3.55
195 196 6.791303 ACAACACACCAGTATGTTAAAACTG 58.209 36.000 0.00 6.82 42.25 3.16
196 197 7.399245 AACAACACACCAGTATGTTAAAACT 57.601 32.000 0.00 0.00 36.92 2.66
197 198 9.176181 CATAACAACACACCAGTATGTTAAAAC 57.824 33.333 0.00 0.00 40.02 2.43
198 199 8.353684 CCATAACAACACACCAGTATGTTAAAA 58.646 33.333 0.00 0.00 40.02 1.52
199 200 7.522399 GCCATAACAACACACCAGTATGTTAAA 60.522 37.037 0.00 0.00 40.02 1.52
200 201 6.072397 GCCATAACAACACACCAGTATGTTAA 60.072 38.462 0.00 0.00 40.02 2.01
201 202 5.413213 GCCATAACAACACACCAGTATGTTA 59.587 40.000 0.00 0.00 40.46 2.41
202 203 4.217550 GCCATAACAACACACCAGTATGTT 59.782 41.667 0.00 0.00 39.63 2.71
203 204 3.756434 GCCATAACAACACACCAGTATGT 59.244 43.478 0.00 0.00 0.00 2.29
204 205 3.755905 TGCCATAACAACACACCAGTATG 59.244 43.478 0.00 0.00 0.00 2.39
205 206 4.027674 TGCCATAACAACACACCAGTAT 57.972 40.909 0.00 0.00 0.00 2.12
206 207 3.493767 TGCCATAACAACACACCAGTA 57.506 42.857 0.00 0.00 0.00 2.74
207 208 2.356665 TGCCATAACAACACACCAGT 57.643 45.000 0.00 0.00 0.00 4.00
208 209 3.940209 AATGCCATAACAACACACCAG 57.060 42.857 0.00 0.00 0.00 4.00
209 210 3.638627 TGAAATGCCATAACAACACACCA 59.361 39.130 0.00 0.00 0.00 4.17
210 211 4.022416 TCTGAAATGCCATAACAACACACC 60.022 41.667 0.00 0.00 0.00 4.16
211 212 5.119931 TCTGAAATGCCATAACAACACAC 57.880 39.130 0.00 0.00 0.00 3.82
285 286 4.232221 CCAAAGACAAATAACTGCTGCAG 58.768 43.478 27.02 27.02 37.52 4.41
324 325 9.553064 AAACTCTAGCATGTGGAGATAAATTAG 57.447 33.333 15.03 0.00 0.00 1.73
338 339 6.893958 AAAGTCATACGAAACTCTAGCATG 57.106 37.500 0.00 0.00 0.00 4.06
393 394 5.106475 TGCACGTGAGTTACTTTCTGTTTTT 60.106 36.000 22.23 0.00 46.40 1.94
394 395 4.393680 TGCACGTGAGTTACTTTCTGTTTT 59.606 37.500 22.23 0.00 46.40 2.43
404 405 2.864343 ACTGTTTCTGCACGTGAGTTAC 59.136 45.455 22.23 14.73 46.40 2.50
419 420 2.976099 GGCTGGCCCAATACTGTTT 58.024 52.632 0.00 0.00 0.00 2.83
451 453 5.477291 AGTCATAATACATCTCCACCTACGG 59.523 44.000 0.00 0.00 0.00 4.02
458 460 4.262036 GGTGCGAGTCATAATACATCTCCA 60.262 45.833 0.00 0.00 0.00 3.86
459 461 4.238514 GGTGCGAGTCATAATACATCTCC 58.761 47.826 0.00 0.00 0.00 3.71
566 568 7.439381 AGTGTTGTCGTTTCCTTCTTATCTTA 58.561 34.615 0.00 0.00 0.00 2.10
573 575 3.869065 TCAAGTGTTGTCGTTTCCTTCT 58.131 40.909 0.00 0.00 0.00 2.85
574 576 4.813296 ATCAAGTGTTGTCGTTTCCTTC 57.187 40.909 0.00 0.00 0.00 3.46
575 577 5.120399 TGTATCAAGTGTTGTCGTTTCCTT 58.880 37.500 0.00 0.00 0.00 3.36
616 618 0.736325 CCTAGCGTTGTCGTTCCCTG 60.736 60.000 0.00 0.00 39.49 4.45
630 632 7.435784 GCTAAGTTGAGACTATTTGTACCTAGC 59.564 40.741 0.00 0.00 34.21 3.42
642 770 5.710567 TCTGCACTTAGCTAAGTTGAGACTA 59.289 40.000 31.90 14.25 43.57 2.59
652 780 4.714802 TCCAAGGTATCTGCACTTAGCTAA 59.285 41.667 5.94 5.94 45.94 3.09
656 784 5.923204 AGATTCCAAGGTATCTGCACTTAG 58.077 41.667 7.35 0.00 32.33 2.18
660 788 4.142609 TGAGATTCCAAGGTATCTGCAC 57.857 45.455 12.26 0.69 33.43 4.57
665 793 5.694006 CGAGTGAATGAGATTCCAAGGTATC 59.306 44.000 0.00 0.00 38.50 2.24
682 810 6.758416 CAGACATTTCTCAATATCCGAGTGAA 59.242 38.462 2.89 1.30 30.27 3.18
714 842 8.430573 AAGGCTAAAATATTTTGTTACCCACT 57.569 30.769 21.19 7.11 0.00 4.00
795 924 0.315869 CGATTAAATGCCGCGTGTCC 60.316 55.000 4.92 0.00 0.00 4.02
827 957 1.082366 GGTTGCTTGGTGTTACGCG 60.082 57.895 3.53 3.53 0.00 6.01
891 1021 1.782044 ATGCATGTTGTTTTCACCGC 58.218 45.000 0.00 0.00 0.00 5.68
944 1074 2.477863 GCAAGTATGCGTTGATCAACCC 60.478 50.000 28.40 21.85 43.83 4.11
962 1092 1.037493 ACCTGTACGTCTCTGTGCAA 58.963 50.000 0.00 0.00 34.02 4.08
969 1099 1.000506 TGCCTTCAACCTGTACGTCTC 59.999 52.381 0.00 0.00 0.00 3.36
984 1131 1.069049 GCCATGTTTGTCAGTTGCCTT 59.931 47.619 0.00 0.00 0.00 4.35
1053 1200 2.359169 GCCATGGACGTGGAGGAGA 61.359 63.158 18.40 0.00 42.02 3.71
1173 7384 3.920093 CTCCGGGTTGCACTTCCCC 62.920 68.421 0.00 7.37 40.54 4.81
1176 7387 2.281484 TGCTCCGGGTTGCACTTC 60.281 61.111 12.34 0.00 33.94 3.01
1584 7795 0.328258 AGGTGACCTTGAATTCCCCG 59.672 55.000 0.00 0.00 0.00 5.73
1590 7801 2.039084 GTCAGACCAGGTGACCTTGAAT 59.961 50.000 9.99 0.00 38.75 2.57
1709 7923 8.575565 TTATTTAGTTAGATTAGCAGCGACTG 57.424 34.615 2.92 2.92 34.12 3.51
1744 7958 6.092955 ACCTGAGAAAACATCAAGTACGTA 57.907 37.500 0.00 0.00 0.00 3.57
1755 7969 9.959749 GACAAAATACATAAACCTGAGAAAACA 57.040 29.630 0.00 0.00 0.00 2.83
1756 7970 9.959749 TGACAAAATACATAAACCTGAGAAAAC 57.040 29.630 0.00 0.00 0.00 2.43
1761 7975 9.912634 AACAATGACAAAATACATAAACCTGAG 57.087 29.630 0.00 0.00 0.00 3.35
1778 7992 7.979537 AGTAATACTAGCATCGAAACAATGACA 59.020 33.333 0.00 0.00 0.00 3.58
1779 7993 8.269424 CAGTAATACTAGCATCGAAACAATGAC 58.731 37.037 0.00 0.00 0.00 3.06
1780 7994 7.438160 CCAGTAATACTAGCATCGAAACAATGA 59.562 37.037 0.00 0.00 0.00 2.57
1781 7995 7.567571 CCAGTAATACTAGCATCGAAACAATG 58.432 38.462 0.00 0.00 0.00 2.82
1782 7996 6.202954 GCCAGTAATACTAGCATCGAAACAAT 59.797 38.462 5.98 0.00 33.01 2.71
1783 7997 5.522460 GCCAGTAATACTAGCATCGAAACAA 59.478 40.000 5.98 0.00 33.01 2.83
1785 7999 5.290386 AGCCAGTAATACTAGCATCGAAAC 58.710 41.667 12.91 0.00 35.26 2.78
1787 8001 6.644248 TTAGCCAGTAATACTAGCATCGAA 57.356 37.500 12.91 0.00 35.26 3.71
1788 8002 6.040054 TGTTTAGCCAGTAATACTAGCATCGA 59.960 38.462 12.91 0.00 35.26 3.59
1789 8003 6.144080 GTGTTTAGCCAGTAATACTAGCATCG 59.856 42.308 12.91 0.00 35.26 3.84
1790 8004 6.424207 GGTGTTTAGCCAGTAATACTAGCATC 59.576 42.308 12.91 1.87 35.26 3.91
1793 8007 5.667466 TGGTGTTTAGCCAGTAATACTAGC 58.333 41.667 2.61 2.61 32.93 3.42
1795 8009 7.045416 CACATGGTGTTTAGCCAGTAATACTA 58.955 38.462 0.00 0.00 39.65 1.82
1796 8010 5.880332 CACATGGTGTTTAGCCAGTAATACT 59.120 40.000 0.00 0.00 39.65 2.12
1797 8011 5.646360 ACACATGGTGTTTAGCCAGTAATAC 59.354 40.000 0.00 0.00 45.08 1.89
1798 8012 5.811190 ACACATGGTGTTTAGCCAGTAATA 58.189 37.500 0.00 0.00 45.08 0.98
1799 8013 4.662278 ACACATGGTGTTTAGCCAGTAAT 58.338 39.130 0.00 0.00 45.08 1.89
1800 8014 4.093472 ACACATGGTGTTTAGCCAGTAA 57.907 40.909 0.00 0.00 45.08 2.24
1801 8015 3.780804 ACACATGGTGTTTAGCCAGTA 57.219 42.857 0.00 0.00 45.08 2.74
1802 8016 2.656947 ACACATGGTGTTTAGCCAGT 57.343 45.000 0.00 0.00 45.08 4.00
1813 8027 1.795170 GCTCCGCAACAACACATGGT 61.795 55.000 0.00 0.00 0.00 3.55
1844 8058 8.103935 TGAACCACATCAGTTACATAACCATAA 58.896 33.333 0.00 0.00 36.88 1.90
1845 8059 7.551262 GTGAACCACATCAGTTACATAACCATA 59.449 37.037 0.00 0.00 34.16 2.74
1846 8060 6.374333 GTGAACCACATCAGTTACATAACCAT 59.626 38.462 0.00 0.00 34.16 3.55
1847 8061 5.703592 GTGAACCACATCAGTTACATAACCA 59.296 40.000 0.00 0.00 34.16 3.67
1848 8062 5.163893 CGTGAACCACATCAGTTACATAACC 60.164 44.000 0.00 0.00 33.86 2.85
1849 8063 5.407387 ACGTGAACCACATCAGTTACATAAC 59.593 40.000 0.00 0.00 33.40 1.89
1850 8064 5.407084 CACGTGAACCACATCAGTTACATAA 59.593 40.000 10.90 0.00 33.40 1.90
1851 8065 4.926832 CACGTGAACCACATCAGTTACATA 59.073 41.667 10.90 0.00 33.40 2.29
1852 8066 3.745975 CACGTGAACCACATCAGTTACAT 59.254 43.478 10.90 0.00 33.40 2.29
1853 8067 3.127589 CACGTGAACCACATCAGTTACA 58.872 45.455 10.90 0.00 33.40 2.41
1854 8068 3.128349 ACACGTGAACCACATCAGTTAC 58.872 45.455 25.01 0.00 33.40 2.50
1855 8069 3.462483 ACACGTGAACCACATCAGTTA 57.538 42.857 25.01 0.00 33.40 2.24
1856 8070 2.325583 ACACGTGAACCACATCAGTT 57.674 45.000 25.01 0.00 33.40 3.16
1857 8071 2.325583 AACACGTGAACCACATCAGT 57.674 45.000 25.01 0.00 33.40 3.41
1858 8072 4.450757 TGATTAACACGTGAACCACATCAG 59.549 41.667 25.01 0.00 33.40 2.90
1859 8073 4.212425 GTGATTAACACGTGAACCACATCA 59.788 41.667 25.01 16.00 39.78 3.07
1860 8074 4.708601 GTGATTAACACGTGAACCACATC 58.291 43.478 25.01 13.79 39.78 3.06
1861 8075 4.742438 GTGATTAACACGTGAACCACAT 57.258 40.909 25.01 4.89 39.78 3.21
1873 8087 7.392494 AGAATAGACGTCAGAGTGATTAACA 57.608 36.000 19.50 0.00 0.00 2.41
1874 8088 8.614346 AGTAGAATAGACGTCAGAGTGATTAAC 58.386 37.037 19.50 8.54 0.00 2.01
1875 8089 8.734218 AGTAGAATAGACGTCAGAGTGATTAA 57.266 34.615 19.50 0.00 0.00 1.40
1876 8090 7.441760 GGAGTAGAATAGACGTCAGAGTGATTA 59.558 40.741 19.50 0.00 0.00 1.75
1877 8091 6.261381 GGAGTAGAATAGACGTCAGAGTGATT 59.739 42.308 19.50 6.90 0.00 2.57
1878 8092 5.761234 GGAGTAGAATAGACGTCAGAGTGAT 59.239 44.000 19.50 0.00 0.00 3.06
1879 8093 5.117584 GGAGTAGAATAGACGTCAGAGTGA 58.882 45.833 19.50 0.00 0.00 3.41
1880 8094 4.273969 GGGAGTAGAATAGACGTCAGAGTG 59.726 50.000 19.50 0.00 0.00 3.51
1881 8095 4.164604 AGGGAGTAGAATAGACGTCAGAGT 59.835 45.833 19.50 4.01 0.00 3.24
1882 8096 4.710324 AGGGAGTAGAATAGACGTCAGAG 58.290 47.826 19.50 0.00 0.00 3.35
1883 8097 4.409574 AGAGGGAGTAGAATAGACGTCAGA 59.590 45.833 19.50 5.38 0.00 3.27
1884 8098 4.513692 CAGAGGGAGTAGAATAGACGTCAG 59.486 50.000 19.50 0.00 0.00 3.51
1885 8099 4.080469 ACAGAGGGAGTAGAATAGACGTCA 60.080 45.833 19.50 4.13 0.00 4.35
1886 8100 4.453751 ACAGAGGGAGTAGAATAGACGTC 58.546 47.826 7.70 7.70 0.00 4.34
1887 8101 4.164604 AGACAGAGGGAGTAGAATAGACGT 59.835 45.833 0.00 0.00 0.00 4.34
1888 8102 4.710324 AGACAGAGGGAGTAGAATAGACG 58.290 47.826 0.00 0.00 0.00 4.18
1889 8103 5.686753 TGAGACAGAGGGAGTAGAATAGAC 58.313 45.833 0.00 0.00 0.00 2.59
1890 8104 5.977821 TGAGACAGAGGGAGTAGAATAGA 57.022 43.478 0.00 0.00 0.00 1.98
1891 8105 7.411486 TTTTGAGACAGAGGGAGTAGAATAG 57.589 40.000 0.00 0.00 0.00 1.73
1892 8106 7.979786 ATTTTGAGACAGAGGGAGTAGAATA 57.020 36.000 0.00 0.00 0.00 1.75
1893 8107 6.882768 ATTTTGAGACAGAGGGAGTAGAAT 57.117 37.500 0.00 0.00 0.00 2.40
1894 8108 7.979786 ATATTTTGAGACAGAGGGAGTAGAA 57.020 36.000 0.00 0.00 0.00 2.10
1895 8109 9.137459 CTTATATTTTGAGACAGAGGGAGTAGA 57.863 37.037 0.00 0.00 0.00 2.59
1896 8110 9.137459 TCTTATATTTTGAGACAGAGGGAGTAG 57.863 37.037 0.00 0.00 0.00 2.57
1897 8111 9.488762 TTCTTATATTTTGAGACAGAGGGAGTA 57.511 33.333 0.00 0.00 0.00 2.59
1898 8112 7.979786 TCTTATATTTTGAGACAGAGGGAGT 57.020 36.000 0.00 0.00 0.00 3.85
1899 8113 7.436673 CGTTCTTATATTTTGAGACAGAGGGAG 59.563 40.741 0.00 0.00 0.00 4.30
1900 8114 7.093465 ACGTTCTTATATTTTGAGACAGAGGGA 60.093 37.037 0.00 0.00 0.00 4.20
1901 8115 7.042335 ACGTTCTTATATTTTGAGACAGAGGG 58.958 38.462 0.00 0.00 0.00 4.30
1902 8116 8.480643 AACGTTCTTATATTTTGAGACAGAGG 57.519 34.615 0.00 0.00 0.00 3.69
1946 8160 8.753175 CGTCCCAAAATATAAAAACGTTTTTCA 58.247 29.630 35.13 25.77 40.53 2.69
1947 8161 8.215792 CCGTCCCAAAATATAAAAACGTTTTTC 58.784 33.333 35.13 18.68 40.53 2.29
1948 8162 7.924947 TCCGTCCCAAAATATAAAAACGTTTTT 59.075 29.630 33.94 33.94 42.51 1.94
1949 8163 7.432059 TCCGTCCCAAAATATAAAAACGTTTT 58.568 30.769 20.26 20.26 0.00 2.43
1950 8164 6.979465 TCCGTCCCAAAATATAAAAACGTTT 58.021 32.000 7.96 7.96 0.00 3.60
1951 8165 6.349528 CCTCCGTCCCAAAATATAAAAACGTT 60.350 38.462 0.00 0.00 0.00 3.99
1952 8166 5.124297 CCTCCGTCCCAAAATATAAAAACGT 59.876 40.000 0.00 0.00 0.00 3.99
1953 8167 5.449451 CCCTCCGTCCCAAAATATAAAAACG 60.449 44.000 0.00 0.00 0.00 3.60
1954 8168 5.653330 TCCCTCCGTCCCAAAATATAAAAAC 59.347 40.000 0.00 0.00 0.00 2.43
1955 8169 5.828871 TCCCTCCGTCCCAAAATATAAAAA 58.171 37.500 0.00 0.00 0.00 1.94
1956 8170 5.442391 CTCCCTCCGTCCCAAAATATAAAA 58.558 41.667 0.00 0.00 0.00 1.52
1957 8171 4.687769 GCTCCCTCCGTCCCAAAATATAAA 60.688 45.833 0.00 0.00 0.00 1.40
1958 8172 3.181448 GCTCCCTCCGTCCCAAAATATAA 60.181 47.826 0.00 0.00 0.00 0.98
1959 8173 2.370849 GCTCCCTCCGTCCCAAAATATA 59.629 50.000 0.00 0.00 0.00 0.86
1960 8174 1.143073 GCTCCCTCCGTCCCAAAATAT 59.857 52.381 0.00 0.00 0.00 1.28
1961 8175 0.544697 GCTCCCTCCGTCCCAAAATA 59.455 55.000 0.00 0.00 0.00 1.40
1962 8176 1.303282 GCTCCCTCCGTCCCAAAAT 59.697 57.895 0.00 0.00 0.00 1.82
1963 8177 2.150719 TGCTCCCTCCGTCCCAAAA 61.151 57.895 0.00 0.00 0.00 2.44
1964 8178 2.528127 TGCTCCCTCCGTCCCAAA 60.528 61.111 0.00 0.00 0.00 3.28
1965 8179 3.319198 GTGCTCCCTCCGTCCCAA 61.319 66.667 0.00 0.00 0.00 4.12
1968 8182 2.198304 ATTTGGTGCTCCCTCCGTCC 62.198 60.000 1.59 0.00 0.00 4.79
1969 8183 0.539986 TATTTGGTGCTCCCTCCGTC 59.460 55.000 1.59 0.00 0.00 4.79
1970 8184 0.252197 GTATTTGGTGCTCCCTCCGT 59.748 55.000 1.59 0.00 0.00 4.69
1971 8185 0.463833 GGTATTTGGTGCTCCCTCCG 60.464 60.000 1.59 0.00 0.00 4.63
1972 8186 0.623723 TGGTATTTGGTGCTCCCTCC 59.376 55.000 1.59 0.00 0.00 4.30
1973 8187 1.682087 GGTGGTATTTGGTGCTCCCTC 60.682 57.143 1.59 0.00 0.00 4.30
1974 8188 0.331616 GGTGGTATTTGGTGCTCCCT 59.668 55.000 1.59 0.00 0.00 4.20
1975 8189 0.331616 AGGTGGTATTTGGTGCTCCC 59.668 55.000 1.59 0.00 0.00 4.30
1976 8190 1.818674 CAAGGTGGTATTTGGTGCTCC 59.181 52.381 0.00 0.00 0.00 4.70
1977 8191 2.514803 ACAAGGTGGTATTTGGTGCTC 58.485 47.619 0.00 0.00 0.00 4.26
1978 8192 2.675658 ACAAGGTGGTATTTGGTGCT 57.324 45.000 0.00 0.00 0.00 4.40
1979 8193 2.890945 AGAACAAGGTGGTATTTGGTGC 59.109 45.455 0.00 0.00 0.00 5.01
1980 8194 3.506067 GGAGAACAAGGTGGTATTTGGTG 59.494 47.826 0.00 0.00 0.00 4.17
1981 8195 3.499745 GGGAGAACAAGGTGGTATTTGGT 60.500 47.826 0.00 0.00 0.00 3.67
1982 8196 3.089284 GGGAGAACAAGGTGGTATTTGG 58.911 50.000 0.00 0.00 0.00 3.28
1983 8197 2.747446 CGGGAGAACAAGGTGGTATTTG 59.253 50.000 0.00 0.00 0.00 2.32
1984 8198 2.640826 TCGGGAGAACAAGGTGGTATTT 59.359 45.455 0.00 0.00 34.75 1.40
1985 8199 2.262637 TCGGGAGAACAAGGTGGTATT 58.737 47.619 0.00 0.00 34.75 1.89
1986 8200 1.946984 TCGGGAGAACAAGGTGGTAT 58.053 50.000 0.00 0.00 34.75 2.73
1987 8201 1.553248 CATCGGGAGAACAAGGTGGTA 59.447 52.381 0.00 0.00 45.37 3.25
1988 8202 0.324943 CATCGGGAGAACAAGGTGGT 59.675 55.000 0.00 0.00 45.37 4.16
1989 8203 0.613260 TCATCGGGAGAACAAGGTGG 59.387 55.000 0.00 0.00 45.37 4.61
2020 8234 3.356290 ACAAGAGCAAGAACAAGGTTGT 58.644 40.909 0.00 0.00 44.72 3.32
2021 8235 3.378112 TGACAAGAGCAAGAACAAGGTTG 59.622 43.478 0.00 0.00 0.00 3.77
2022 8236 3.378427 GTGACAAGAGCAAGAACAAGGTT 59.622 43.478 0.00 0.00 0.00 3.50
2023 8237 2.945668 GTGACAAGAGCAAGAACAAGGT 59.054 45.455 0.00 0.00 0.00 3.50
2024 8238 2.291741 GGTGACAAGAGCAAGAACAAGG 59.708 50.000 0.00 0.00 0.00 3.61
2025 8239 2.945008 TGGTGACAAGAGCAAGAACAAG 59.055 45.455 0.00 0.00 37.44 3.16
2026 8240 2.997980 TGGTGACAAGAGCAAGAACAA 58.002 42.857 0.00 0.00 37.44 2.83
2027 8241 2.708216 TGGTGACAAGAGCAAGAACA 57.292 45.000 0.00 0.00 37.44 3.18
2040 8254 2.019984 GGAAAGGAGATGCATGGTGAC 58.980 52.381 2.46 0.00 0.00 3.67
2041 8255 1.918262 AGGAAAGGAGATGCATGGTGA 59.082 47.619 2.46 0.00 0.00 4.02
2042 8256 2.295885 GAGGAAAGGAGATGCATGGTG 58.704 52.381 2.46 0.00 0.00 4.17
2043 8257 1.918262 TGAGGAAAGGAGATGCATGGT 59.082 47.619 2.46 0.00 0.00 3.55
2044 8258 2.723322 TGAGGAAAGGAGATGCATGG 57.277 50.000 2.46 0.00 0.00 3.66
2045 8259 4.036498 GTCATTGAGGAAAGGAGATGCATG 59.964 45.833 2.46 0.00 0.00 4.06
2046 8260 4.205587 GTCATTGAGGAAAGGAGATGCAT 58.794 43.478 0.00 0.00 0.00 3.96
2047 8261 3.009363 TGTCATTGAGGAAAGGAGATGCA 59.991 43.478 0.00 0.00 0.00 3.96
2048 8262 3.614092 TGTCATTGAGGAAAGGAGATGC 58.386 45.455 0.00 0.00 0.00 3.91
2049 8263 5.251764 ACTTGTCATTGAGGAAAGGAGATG 58.748 41.667 7.98 0.00 0.00 2.90
2050 8264 5.511386 ACTTGTCATTGAGGAAAGGAGAT 57.489 39.130 7.98 0.00 0.00 2.75
2051 8265 4.982241 ACTTGTCATTGAGGAAAGGAGA 57.018 40.909 7.98 0.00 0.00 3.71
2052 8266 5.049129 GTGAACTTGTCATTGAGGAAAGGAG 60.049 44.000 7.98 0.00 38.90 3.69
2053 8267 4.821805 GTGAACTTGTCATTGAGGAAAGGA 59.178 41.667 7.98 0.00 38.90 3.36
2054 8268 4.580167 TGTGAACTTGTCATTGAGGAAAGG 59.420 41.667 7.98 0.00 38.90 3.11
2055 8269 5.756195 TGTGAACTTGTCATTGAGGAAAG 57.244 39.130 0.00 0.00 38.90 2.62
2056 8270 5.163561 GGTTGTGAACTTGTCATTGAGGAAA 60.164 40.000 0.00 0.00 38.90 3.13
2057 8271 4.338118 GGTTGTGAACTTGTCATTGAGGAA 59.662 41.667 0.00 0.00 38.90 3.36
2058 8272 3.882888 GGTTGTGAACTTGTCATTGAGGA 59.117 43.478 0.00 0.00 38.90 3.71
2059 8273 3.004734 GGGTTGTGAACTTGTCATTGAGG 59.995 47.826 0.00 0.00 38.90 3.86
2060 8274 3.631686 TGGGTTGTGAACTTGTCATTGAG 59.368 43.478 0.00 0.00 38.90 3.02
2061 8275 3.625853 TGGGTTGTGAACTTGTCATTGA 58.374 40.909 0.00 0.00 38.90 2.57
2062 8276 4.589216 ATGGGTTGTGAACTTGTCATTG 57.411 40.909 0.00 0.00 38.90 2.82
2063 8277 6.009589 TCATATGGGTTGTGAACTTGTCATT 58.990 36.000 2.13 0.00 38.90 2.57
2064 8278 5.415701 GTCATATGGGTTGTGAACTTGTCAT 59.584 40.000 2.13 0.00 38.90 3.06
2065 8279 4.759693 GTCATATGGGTTGTGAACTTGTCA 59.240 41.667 2.13 0.00 0.00 3.58
2066 8280 4.759693 TGTCATATGGGTTGTGAACTTGTC 59.240 41.667 2.13 0.00 0.00 3.18
2067 8281 4.724399 TGTCATATGGGTTGTGAACTTGT 58.276 39.130 2.13 0.00 0.00 3.16
2068 8282 5.335897 CCTTGTCATATGGGTTGTGAACTTG 60.336 44.000 2.13 0.00 0.00 3.16
2069 8283 4.766891 CCTTGTCATATGGGTTGTGAACTT 59.233 41.667 2.13 0.00 0.00 2.66
2070 8284 4.042809 TCCTTGTCATATGGGTTGTGAACT 59.957 41.667 2.13 0.00 0.00 3.01
2071 8285 4.331968 TCCTTGTCATATGGGTTGTGAAC 58.668 43.478 2.13 0.00 0.00 3.18
2072 8286 4.567537 CCTCCTTGTCATATGGGTTGTGAA 60.568 45.833 2.13 0.00 0.00 3.18
2073 8287 3.054434 CCTCCTTGTCATATGGGTTGTGA 60.054 47.826 2.13 0.00 0.00 3.58
2074 8288 3.282021 CCTCCTTGTCATATGGGTTGTG 58.718 50.000 2.13 0.00 0.00 3.33
2075 8289 2.357154 GCCTCCTTGTCATATGGGTTGT 60.357 50.000 2.13 0.00 0.00 3.32
2076 8290 2.092212 AGCCTCCTTGTCATATGGGTTG 60.092 50.000 2.13 0.00 0.00 3.77
2077 8291 2.092212 CAGCCTCCTTGTCATATGGGTT 60.092 50.000 2.13 0.00 0.00 4.11
2078 8292 1.492176 CAGCCTCCTTGTCATATGGGT 59.508 52.381 2.13 0.00 0.00 4.51
2079 8293 1.202855 CCAGCCTCCTTGTCATATGGG 60.203 57.143 2.13 0.00 0.00 4.00
2080 8294 1.202855 CCCAGCCTCCTTGTCATATGG 60.203 57.143 2.13 0.00 0.00 2.74
2081 8295 1.770658 TCCCAGCCTCCTTGTCATATG 59.229 52.381 0.00 0.00 0.00 1.78
2082 8296 2.196742 TCCCAGCCTCCTTGTCATAT 57.803 50.000 0.00 0.00 0.00 1.78
2083 8297 1.770658 CATCCCAGCCTCCTTGTCATA 59.229 52.381 0.00 0.00 0.00 2.15
2084 8298 0.549950 CATCCCAGCCTCCTTGTCAT 59.450 55.000 0.00 0.00 0.00 3.06
2085 8299 0.842030 ACATCCCAGCCTCCTTGTCA 60.842 55.000 0.00 0.00 0.00 3.58
2086 8300 0.107459 GACATCCCAGCCTCCTTGTC 60.107 60.000 0.00 0.00 0.00 3.18
2087 8301 0.842030 TGACATCCCAGCCTCCTTGT 60.842 55.000 0.00 0.00 0.00 3.16
2096 8310 3.751479 TCCGTATCATTGACATCCCAG 57.249 47.619 0.00 0.00 0.00 4.45
2105 8319 2.223249 CCACCGCTTTTCCGTATCATTG 60.223 50.000 0.00 0.00 0.00 2.82
2115 8329 0.608308 AGCCCTTACCACCGCTTTTC 60.608 55.000 0.00 0.00 0.00 2.29
2121 8335 1.208535 TCACATAAGCCCTTACCACCG 59.791 52.381 0.00 0.00 0.00 4.94
2122 8336 3.359695 TTCACATAAGCCCTTACCACC 57.640 47.619 0.00 0.00 0.00 4.61
2123 8337 4.096382 CACATTCACATAAGCCCTTACCAC 59.904 45.833 0.00 0.00 0.00 4.16
2129 8343 2.041620 ACACCACATTCACATAAGCCCT 59.958 45.455 0.00 0.00 0.00 5.19
2137 8351 5.298276 GGAAAACTTAGACACCACATTCACA 59.702 40.000 0.00 0.00 0.00 3.58
2149 8363 7.664318 TCCTATGGTCAAAAGGAAAACTTAGAC 59.336 37.037 3.77 0.00 40.67 2.59
2154 8368 5.074515 TCCTCCTATGGTCAAAAGGAAAACT 59.925 40.000 6.80 0.00 38.91 2.66
2172 8386 8.748179 TCTCATCATCCTATATTTTTCCTCCT 57.252 34.615 0.00 0.00 0.00 3.69
2198 8412 3.596214 GGTTGCTTGAGGTTTCTCGATA 58.404 45.455 0.00 0.00 42.79 2.92
2206 8420 0.182775 AAGACCGGTTGCTTGAGGTT 59.817 50.000 9.42 0.00 37.07 3.50
2208 8422 0.250295 TGAAGACCGGTTGCTTGAGG 60.250 55.000 9.42 0.00 0.00 3.86
2220 8434 1.795768 TGCGAACTGACATGAAGACC 58.204 50.000 0.00 0.00 0.00 3.85
2225 8439 3.785486 CCTAGAATGCGAACTGACATGA 58.215 45.455 0.00 0.00 0.00 3.07
2229 8443 2.010145 TGCCTAGAATGCGAACTGAC 57.990 50.000 0.00 0.00 0.00 3.51
2233 8447 1.953559 TCCATGCCTAGAATGCGAAC 58.046 50.000 0.00 0.00 0.00 3.95
2237 8451 2.368439 TGTGTTCCATGCCTAGAATGC 58.632 47.619 0.00 0.00 0.00 3.56
2241 8455 6.015095 CACTAGATATGTGTTCCATGCCTAGA 60.015 42.308 0.00 0.00 38.18 2.43
2263 8477 1.414181 CATGGAAGCTCCCGTATCACT 59.586 52.381 0.00 0.00 35.03 3.41
2280 8494 0.106868 TCCTGAAGCATGGGAGCATG 60.107 55.000 0.00 0.00 36.85 4.06
2297 8511 0.980423 ACAGTGAAGGAAGGAGCTCC 59.020 55.000 26.22 26.22 35.51 4.70
2305 8519 6.566079 ATCAATGATCCTACAGTGAAGGAA 57.434 37.500 0.00 0.00 46.06 3.36
2306 8520 6.166984 GATCAATGATCCTACAGTGAAGGA 57.833 41.667 12.01 0.00 45.33 3.36
2319 8533 6.657966 TCTCCATAGCAATTGGATCAATGATC 59.342 38.462 14.51 14.51 42.26 2.92
2333 8547 1.656652 GCGAGCTTTCTCCATAGCAA 58.343 50.000 0.00 0.00 39.85 3.91
2345 8559 6.689039 TTTGTTAACAATTTTGCGCGAGCTT 61.689 36.000 21.17 0.00 46.57 3.74
2352 8566 7.742089 TCACAAGTTTTTGTTAACAATTTTGCG 59.258 29.630 21.17 15.33 45.01 4.85
2373 8587 2.752354 CGCATAATCAAGGGGTTCACAA 59.248 45.455 0.00 0.00 0.00 3.33
2376 8590 1.340502 TGCGCATAATCAAGGGGTTCA 60.341 47.619 5.66 0.00 0.00 3.18
2380 8594 1.334869 GAGTTGCGCATAATCAAGGGG 59.665 52.381 12.75 0.00 0.00 4.79
2383 8597 2.016318 TGGGAGTTGCGCATAATCAAG 58.984 47.619 12.75 0.00 34.12 3.02
2386 8600 2.017049 ACTTGGGAGTTGCGCATAATC 58.983 47.619 12.75 11.11 39.39 1.75
2394 8608 2.027745 TCATCAGAGACTTGGGAGTTGC 60.028 50.000 0.00 0.00 35.88 4.17
2408 8622 2.373169 GGACCCAATAGCCATCATCAGA 59.627 50.000 0.00 0.00 0.00 3.27
2411 8625 2.508526 GTGGACCCAATAGCCATCATC 58.491 52.381 0.00 0.00 33.66 2.92
2413 8627 0.180171 CGTGGACCCAATAGCCATCA 59.820 55.000 0.00 0.00 33.66 3.07
2420 8634 2.093181 CAGTTGGATCGTGGACCCAATA 60.093 50.000 0.00 0.00 41.41 1.90
2441 8655 1.002011 GCTCCAGGAGGTTCCCAAC 60.002 63.158 18.83 0.00 37.19 3.77
2455 8669 1.826921 CACCATGCTCCCATGCTCC 60.827 63.158 0.00 0.00 45.97 4.70
2457 8671 2.277737 CCACCATGCTCCCATGCT 59.722 61.111 0.00 0.00 45.97 3.79
2502 8716 1.202099 TGGTAACGGGGAAGGCATGA 61.202 55.000 0.00 0.00 42.51 3.07
2515 8729 5.240623 TGACAAATGTTGAGGTGATGGTAAC 59.759 40.000 0.00 0.00 0.00 2.50
2520 8734 5.185668 TGTTGACAAATGTTGAGGTGATG 57.814 39.130 0.00 0.00 0.00 3.07
2522 8736 4.460731 TGTTGTTGACAAATGTTGAGGTGA 59.539 37.500 0.00 0.00 37.63 4.02
2524 8738 5.126869 TGATGTTGTTGACAAATGTTGAGGT 59.873 36.000 0.00 0.00 42.62 3.85
2530 8744 4.161189 TGGGTTGATGTTGTTGACAAATGT 59.839 37.500 0.00 0.00 42.62 2.71
2534 8748 3.092301 TGTGGGTTGATGTTGTTGACAA 58.908 40.909 0.00 0.00 42.62 3.18
2537 8751 2.425312 GTGTGTGGGTTGATGTTGTTGA 59.575 45.455 0.00 0.00 0.00 3.18
2549 8763 2.529389 GAGGGAGGGTGTGTGGGT 60.529 66.667 0.00 0.00 0.00 4.51
2578 8792 2.440409 AGGATGGCTGACAATGTTGAC 58.560 47.619 0.00 0.00 0.00 3.18
2579 8793 2.821378 CAAGGATGGCTGACAATGTTGA 59.179 45.455 0.00 0.00 0.00 3.18
2580 8794 2.821378 TCAAGGATGGCTGACAATGTTG 59.179 45.455 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.