Multiple sequence alignment - TraesCS4D01G268800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G268800 chr4D 100.000 6978 0 0 1 6978 439775021 439781998 0.000000e+00 12887.0
1 TraesCS4D01G268800 chr4D 83.411 645 82 15 3933 4572 437955528 437956152 6.070000e-160 575.0
2 TraesCS4D01G268800 chr4D 80.245 653 78 22 1374 2002 437954177 437954802 1.790000e-120 444.0
3 TraesCS4D01G268800 chr4D 83.299 491 52 17 4636 5116 437956296 437956766 6.470000e-115 425.0
4 TraesCS4D01G268800 chr4D 90.323 186 17 1 2036 2220 437955062 437955247 6.990000e-60 243.0
5 TraesCS4D01G268800 chr4D 97.753 89 1 1 5061 5149 439780160 439780247 1.210000e-32 152.0
6 TraesCS4D01G268800 chr4D 78.462 195 40 2 6618 6812 129755927 129755735 7.350000e-25 126.0
7 TraesCS4D01G268800 chr4D 94.872 78 2 2 5293 5369 100365087 100365011 3.420000e-23 121.0
8 TraesCS4D01G268800 chr4D 95.833 72 3 0 4556 4627 437956164 437956235 4.420000e-22 117.0
9 TraesCS4D01G268800 chr4D 97.917 48 1 0 5459 5506 437956760 437956807 4.490000e-12 84.2
10 TraesCS4D01G268800 chr4D 97.619 42 1 0 5108 5149 106682247 106682288 9.710000e-09 73.1
11 TraesCS4D01G268800 chr4D 93.750 48 1 2 5102 5149 353045357 353045402 3.490000e-08 71.3
12 TraesCS4D01G268800 chr4D 93.478 46 2 1 5569 5613 439780551 439780596 4.520000e-07 67.6
13 TraesCS4D01G268800 chr4D 93.478 46 2 1 5531 5576 439780589 439780633 4.520000e-07 67.6
14 TraesCS4D01G268800 chr4B 97.059 2754 71 8 2399 5149 544595047 544597793 0.000000e+00 4628.0
15 TraesCS4D01G268800 chr4B 93.784 1834 68 17 601 2405 544593138 544594954 0.000000e+00 2713.0
16 TraesCS4D01G268800 chr4B 94.751 743 31 6 5569 6306 544597952 544598691 0.000000e+00 1149.0
17 TraesCS4D01G268800 chr4B 83.796 648 81 11 3933 4572 541442422 541443053 1.680000e-165 593.0
18 TraesCS4D01G268800 chr4B 87.755 441 39 6 6308 6747 544601109 544601535 1.040000e-137 501.0
19 TraesCS4D01G268800 chr4B 94.167 240 13 1 6740 6978 544601836 544602075 1.430000e-96 364.0
20 TraesCS4D01G268800 chr4B 95.050 202 6 4 5371 5569 544597790 544597990 1.460000e-81 315.0
21 TraesCS4D01G268800 chr4B 82.336 351 49 12 4770 5115 541443281 541443623 6.850000e-75 292.0
22 TraesCS4D01G268800 chr4B 83.451 284 33 7 1950 2220 541441854 541442136 1.160000e-62 252.0
23 TraesCS4D01G268800 chr4B 96.939 98 3 0 4556 4653 541443065 541443162 1.560000e-36 165.0
24 TraesCS4D01G268800 chr4B 81.771 192 32 3 6617 6806 400701780 400701970 2.610000e-34 158.0
25 TraesCS4D01G268800 chr4B 81.765 170 16 3 1779 1948 541382849 541383003 2.040000e-25 128.0
26 TraesCS4D01G268800 chr4B 93.671 79 4 1 5293 5370 145807159 145807237 4.420000e-22 117.0
27 TraesCS4D01G268800 chr4B 91.765 85 4 1 5288 5369 604056677 604056761 1.590000e-21 115.0
28 TraesCS4D01G268800 chr4B 97.778 45 1 0 5105 5149 340640636 340640680 2.090000e-10 78.7
29 TraesCS4D01G268800 chr4B 93.617 47 3 0 5103 5149 135915589 135915543 3.490000e-08 71.3
30 TraesCS4D01G268800 chr4B 89.474 57 2 4 5095 5149 534746432 534746486 1.260000e-07 69.4
31 TraesCS4D01G268800 chr4B 91.667 48 4 0 5459 5506 541443618 541443665 4.520000e-07 67.6
32 TraesCS4D01G268800 chr4A 97.900 2571 52 2 2579 5149 29074870 29077438 0.000000e+00 4447.0
33 TraesCS4D01G268800 chr4A 95.969 1538 47 4 872 2405 29072893 29074419 0.000000e+00 2483.0
34 TraesCS4D01G268800 chr4A 91.857 614 47 2 5569 6181 29077598 29078209 0.000000e+00 854.0
35 TraesCS4D01G268800 chr4A 94.130 460 27 0 3 462 29071785 29072244 0.000000e+00 701.0
36 TraesCS4D01G268800 chr4A 86.564 521 57 8 1708 2220 30144415 30143900 4.730000e-156 562.0
37 TraesCS4D01G268800 chr4A 85.083 543 66 14 4580 5116 30143119 30142586 2.210000e-149 540.0
38 TraesCS4D01G268800 chr4A 85.458 502 59 8 3940 4429 30143619 30143120 1.740000e-140 510.0
39 TraesCS4D01G268800 chr4A 92.063 315 12 6 543 848 29072316 29072626 1.390000e-116 431.0
40 TraesCS4D01G268800 chr4A 78.559 555 88 25 5667 6215 30142251 30141722 3.120000e-88 337.0
41 TraesCS4D01G268800 chr4A 97.253 182 5 0 2399 2580 29074512 29074693 6.800000e-80 309.0
42 TraesCS4D01G268800 chr4A 92.308 195 12 3 5383 5576 29077450 29077642 2.480000e-69 274.0
43 TraesCS4D01G268800 chr4A 91.579 95 5 3 5371 5463 60654192 60654285 2.040000e-25 128.0
44 TraesCS4D01G268800 chr4A 100.000 45 0 0 5462 5506 30142589 30142545 4.490000e-12 84.2
45 TraesCS4D01G268800 chr4A 85.897 78 7 4 5585 5659 30142517 30142441 5.800000e-11 80.5
46 TraesCS4D01G268800 chr7D 97.297 111 2 1 5186 5296 135760630 135760739 3.320000e-43 187.0
47 TraesCS4D01G268800 chr7D 95.614 114 5 0 5183 5296 567712446 567712559 4.300000e-42 183.0
48 TraesCS4D01G268800 chr7D 93.443 122 5 2 5175 5296 94652808 94652690 2.000000e-40 178.0
49 TraesCS4D01G268800 chr7D 97.436 39 1 0 5111 5149 496781058 496781020 4.520000e-07 67.6
50 TraesCS4D01G268800 chr7D 95.122 41 2 0 5109 5149 6770998 6770958 1.620000e-06 65.8
51 TraesCS4D01G268800 chr5D 98.113 106 2 0 5191 5296 241844204 241844099 1.200000e-42 185.0
52 TraesCS4D01G268800 chr3B 97.248 109 3 0 5188 5296 355437314 355437422 1.200000e-42 185.0
53 TraesCS4D01G268800 chr3B 91.667 96 4 1 5368 5463 637088584 637088493 5.680000e-26 130.0
54 TraesCS4D01G268800 chr2B 98.113 106 2 0 5191 5296 199013852 199013747 1.200000e-42 185.0
55 TraesCS4D01G268800 chr2B 85.165 182 21 5 2216 2394 798162877 798163055 1.550000e-41 182.0
56 TraesCS4D01G268800 chr2B 89.333 75 8 0 2320 2394 798162893 798162819 2.070000e-15 95.3
57 TraesCS4D01G268800 chr2B 88.136 59 6 1 5092 5149 402802767 402802709 1.260000e-07 69.4
58 TraesCS4D01G268800 chr1B 88.312 154 18 0 5191 5344 40851913 40852066 1.200000e-42 185.0
59 TraesCS4D01G268800 chr1B 77.340 203 41 4 6611 6812 15336082 15336280 1.590000e-21 115.0
60 TraesCS4D01G268800 chr6D 95.575 113 5 0 5184 5296 115044531 115044643 1.550000e-41 182.0
61 TraesCS4D01G268800 chr6D 97.619 42 1 0 5108 5149 28399802 28399843 9.710000e-09 73.1
62 TraesCS4D01G268800 chr6D 97.619 42 1 0 5108 5149 183707729 183707688 9.710000e-09 73.1
63 TraesCS4D01G268800 chr3A 95.575 113 5 0 5184 5296 142037477 142037589 1.550000e-41 182.0
64 TraesCS4D01G268800 chr3A 81.395 215 34 5 6615 6829 529112451 529112659 3.350000e-38 171.0
65 TraesCS4D01G268800 chr3A 96.203 79 3 0 5385 5463 686191292 686191214 5.680000e-26 130.0
66 TraesCS4D01G268800 chr3A 86.441 118 13 3 5343 5458 469077459 469077343 7.350000e-25 126.0
67 TraesCS4D01G268800 chr3A 70.621 354 102 2 98 449 46970407 46970760 7.510000e-10 76.8
68 TraesCS4D01G268800 chr3A 97.727 44 1 0 5106 5149 142037477 142037520 7.510000e-10 76.8
69 TraesCS4D01G268800 chr3A 91.071 56 3 2 5092 5146 59515860 59515914 2.700000e-09 75.0
70 TraesCS4D01G268800 chr3A 88.136 59 4 3 5091 5149 693337555 693337500 4.520000e-07 67.6
71 TraesCS4D01G268800 chr6A 81.735 219 37 3 6615 6832 560039582 560039798 5.560000e-41 180.0
72 TraesCS4D01G268800 chr6A 92.157 51 2 2 5099 5149 420414108 420414156 3.490000e-08 71.3
73 TraesCS4D01G268800 chr6B 81.517 211 30 8 6618 6824 44081818 44081613 1.560000e-36 165.0
74 TraesCS4D01G268800 chr6B 92.500 80 2 2 5297 5372 583626499 583626420 2.060000e-20 111.0
75 TraesCS4D01G268800 chrUn 81.026 195 35 2 6618 6812 474691035 474690843 3.370000e-33 154.0
76 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 15415993 15415953 3.490000e-08 71.3
77 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 15748093 15748133 3.490000e-08 71.3
78 TraesCS4D01G268800 chrUn 95.556 45 1 1 5105 5149 87272236 87272193 3.490000e-08 71.3
79 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 308283151 308283111 3.490000e-08 71.3
80 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 336470822 336470862 3.490000e-08 71.3
81 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 336480541 336480501 3.490000e-08 71.3
82 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 361187706 361187666 3.490000e-08 71.3
83 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 376403743 376403783 3.490000e-08 71.3
84 TraesCS4D01G268800 chrUn 97.561 41 1 0 5109 5149 439165556 439165516 3.490000e-08 71.3
85 TraesCS4D01G268800 chr5B 94.118 102 3 2 5365 5463 123753453 123753554 1.210000e-32 152.0
86 TraesCS4D01G268800 chr5B 94.872 78 1 2 5297 5371 705275881 705275958 1.230000e-22 119.0
87 TraesCS4D01G268800 chr7A 80.102 196 37 2 6618 6812 571740159 571739965 2.030000e-30 145.0
88 TraesCS4D01G268800 chr7A 94.186 86 5 0 5385 5470 498590307 498590392 1.580000e-26 132.0
89 TraesCS4D01G268800 chr7A 95.890 73 2 1 5297 5369 28406865 28406794 4.420000e-22 117.0
90 TraesCS4D01G268800 chr1D 92.473 93 4 1 5369 5458 377007012 377006920 5.680000e-26 130.0
91 TraesCS4D01G268800 chr1D 95.556 45 2 0 5105 5149 312469427 312469383 9.710000e-09 73.1
92 TraesCS4D01G268800 chr1D 92.157 51 3 1 5100 5149 290446452 290446502 3.490000e-08 71.3
93 TraesCS4D01G268800 chr2A 91.667 84 7 0 5261 5344 440365582 440365499 4.420000e-22 117.0
94 TraesCS4D01G268800 chr2A 90.476 84 8 0 5261 5344 529587671 529587588 2.060000e-20 111.0
95 TraesCS4D01G268800 chr2A 89.333 75 8 0 2320 2394 764732312 764732238 2.070000e-15 95.3
96 TraesCS4D01G268800 chr2D 92.453 53 4 0 5097 5149 71839859 71839911 7.510000e-10 76.8
97 TraesCS4D01G268800 chr1A 75.472 159 38 1 281 438 520840779 520840621 7.510000e-10 76.8
98 TraesCS4D01G268800 chr1A 91.837 49 2 2 5102 5149 335543316 335543363 4.520000e-07 67.6
99 TraesCS4D01G268800 chr3D 93.750 48 3 0 5100 5147 134834425 134834378 9.710000e-09 73.1
100 TraesCS4D01G268800 chr5A 100.000 31 0 0 5342 5372 356017125 356017095 2.720000e-04 58.4
101 TraesCS4D01G268800 chr5A 97.059 34 0 1 5343 5376 650371433 650371465 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G268800 chr4D 439775021 439781998 6977 False 3293.550000 12887 96.177250 1 6978 4 chr4D.!!$F4 6977
1 TraesCS4D01G268800 chr4D 437954177 437956807 2630 False 314.700000 575 88.504667 1374 5506 6 chr4D.!!$F3 4132
2 TraesCS4D01G268800 chr4B 544593138 544602075 8937 False 1611.666667 4628 93.761000 601 6978 6 chr4B.!!$F8 6377
3 TraesCS4D01G268800 chr4B 541441854 541443665 1811 False 273.920000 593 87.637800 1950 5506 5 chr4B.!!$F7 3556
4 TraesCS4D01G268800 chr4A 29071785 29078209 6424 False 1357.000000 4447 94.497143 3 6181 7 chr4A.!!$F2 6178
5 TraesCS4D01G268800 chr4A 30141722 30144415 2693 True 352.283333 562 86.926833 1708 6215 6 chr4A.!!$R1 4507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
810 853 0.177836 GCAGCTCTTCCTCTTCCTCC 59.822 60.000 0.00 0.00 0.00 4.30 F
1415 1715 0.182299 GGAGCTTCCTGAGGATTGGG 59.818 60.000 0.04 0.00 32.53 4.12 F
2461 3167 0.899720 TTGGTAAGTAGGGTCCTGCG 59.100 55.000 0.00 0.00 33.85 5.18 F
3088 3981 2.203625 TTGCCCAGCTTCCCAACC 60.204 61.111 0.00 0.00 0.00 3.77 F
4166 5065 0.683179 TAGGGTTAGCGAGCTCAGCA 60.683 55.000 25.12 13.03 37.01 4.41 F
5091 6141 0.618968 CCTACCCAGGGAGCAGAACT 60.619 60.000 14.54 0.00 38.41 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2442 3148 0.899720 CGCAGGACCCTACTTACCAA 59.100 55.000 0.00 0.00 0.00 3.67 R
2861 3754 1.880027 CATAACCATTAGGAAGCCCGC 59.120 52.381 0.00 0.00 38.69 6.13 R
3857 4750 0.113580 TGGAAGTAAGGTTTGGCCCC 59.886 55.000 0.00 0.00 38.26 5.80 R
4467 5376 0.526954 GCGAGGCATGGAAAATGCAG 60.527 55.000 12.01 4.46 46.21 4.41 R
5153 6203 0.111253 CAAAGTTCTGCTCCCTGGGT 59.889 55.000 13.56 0.00 0.00 4.51 R
6655 10324 0.250338 GGAGCCGACTTGACCTTGTT 60.250 55.000 0.00 0.00 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 4.496507 GCCACTTTCTGTCTGTTTCAAGAC 60.497 45.833 0.00 0.00 45.70 3.01
83 84 6.820152 TCAATCAATTCTGACACTGTATCTGG 59.180 38.462 0.00 0.00 33.30 3.86
87 88 3.169512 TCTGACACTGTATCTGGTGGA 57.830 47.619 0.00 0.00 37.72 4.02
157 158 4.157289 GCCAATTGTCAGCCCATATATCTG 59.843 45.833 4.43 0.00 0.00 2.90
163 164 6.493189 TGTCAGCCCATATATCTGTTGTAA 57.507 37.500 1.15 0.00 0.00 2.41
168 169 6.648310 CAGCCCATATATCTGTTGTAACTCTG 59.352 42.308 0.00 0.00 0.00 3.35
173 174 7.041780 CCATATATCTGTTGTAACTCTGTTGCC 60.042 40.741 0.00 0.00 0.00 4.52
177 178 3.202906 TGTTGTAACTCTGTTGCCTGTC 58.797 45.455 0.00 0.00 0.00 3.51
182 183 1.374758 CTCTGTTGCCTGTCCGTCC 60.375 63.158 0.00 0.00 0.00 4.79
193 194 1.753463 GTCCGTCCGATCAGACCCT 60.753 63.158 3.47 0.00 32.91 4.34
198 199 0.250513 GTCCGATCAGACCCTGCTTT 59.749 55.000 0.00 0.00 0.00 3.51
218 219 5.804771 GCTTTAAAGTGTCTCTTCCCTCCAT 60.805 44.000 16.38 0.00 35.02 3.41
230 231 3.923273 TCCCTCCATAATAGCTCTCCA 57.077 47.619 0.00 0.00 0.00 3.86
240 241 6.126825 CCATAATAGCTCTCCATATCTGGCTT 60.127 42.308 0.00 0.00 42.80 4.35
286 287 9.927668 CATTCAAAATAGTTGAATTTGGGTAGT 57.072 29.630 10.77 0.00 44.16 2.73
362 363 3.695022 CTTGCCGAGCCAGCATTGC 62.695 63.158 0.00 0.00 40.59 3.56
365 366 2.831742 CCGAGCCAGCATTGCCAT 60.832 61.111 4.70 0.00 0.00 4.40
376 377 4.053295 CAGCATTGCCATGTTAAATAGCC 58.947 43.478 4.70 0.00 32.28 3.93
400 401 7.606073 GCCCAAAATCTTTAAAGCCTAAATCAA 59.394 33.333 10.51 0.00 0.00 2.57
436 437 2.031682 GCGTCATTGCCTTCCATGATAC 60.032 50.000 0.00 0.00 0.00 2.24
453 454 0.981183 TACCTCGTGTGGCTTCCATT 59.019 50.000 0.00 0.00 35.28 3.16
462 463 1.743394 GTGGCTTCCATTTACCTTCCG 59.257 52.381 0.00 0.00 35.28 4.30
463 464 1.340600 TGGCTTCCATTTACCTTCCGG 60.341 52.381 0.00 0.00 0.00 5.14
476 499 4.295141 ACCTTCCGGATTAACATGTTCA 57.705 40.909 15.85 4.28 0.00 3.18
492 515 4.717233 TGTTCAAATGTTCACACAAGCT 57.283 36.364 0.00 0.00 36.16 3.74
494 517 5.101628 TGTTCAAATGTTCACACAAGCTTC 58.898 37.500 0.00 0.00 36.16 3.86
510 533 7.719633 ACACAAGCTTCTAGGAAGTTTGAATAA 59.280 33.333 29.30 0.00 39.74 1.40
657 680 1.589716 GCCCTGTGCTAGTTGGCAAG 61.590 60.000 0.00 0.00 44.18 4.01
659 682 0.962356 CCTGTGCTAGTTGGCAAGGG 60.962 60.000 0.00 0.00 44.18 3.95
804 847 1.304879 AGGACGCAGCTCTTCCTCT 60.305 57.895 1.98 0.00 39.00 3.69
805 848 0.902516 AGGACGCAGCTCTTCCTCTT 60.903 55.000 1.98 0.00 39.00 2.85
806 849 0.459411 GGACGCAGCTCTTCCTCTTC 60.459 60.000 0.00 0.00 30.88 2.87
807 850 0.459411 GACGCAGCTCTTCCTCTTCC 60.459 60.000 0.00 0.00 0.00 3.46
808 851 0.902516 ACGCAGCTCTTCCTCTTCCT 60.903 55.000 0.00 0.00 0.00 3.36
809 852 0.179113 CGCAGCTCTTCCTCTTCCTC 60.179 60.000 0.00 0.00 0.00 3.71
810 853 0.177836 GCAGCTCTTCCTCTTCCTCC 59.822 60.000 0.00 0.00 0.00 4.30
811 854 0.829990 CAGCTCTTCCTCTTCCTCCC 59.170 60.000 0.00 0.00 0.00 4.30
812 855 0.326143 AGCTCTTCCTCTTCCTCCCC 60.326 60.000 0.00 0.00 0.00 4.81
813 856 0.326143 GCTCTTCCTCTTCCTCCCCT 60.326 60.000 0.00 0.00 0.00 4.79
814 857 1.903955 GCTCTTCCTCTTCCTCCCCTT 60.904 57.143 0.00 0.00 0.00 3.95
854 897 4.964241 CCCTCCCCGAGATCCCCC 62.964 77.778 0.00 0.00 0.00 5.40
1300 1599 1.464722 CCCTTTCCCCTTGCTTGGA 59.535 57.895 0.00 0.00 0.00 3.53
1385 1685 7.696453 CCGGTAGCTTACTGATTTACAATTTTG 59.304 37.037 0.00 0.00 37.22 2.44
1389 1689 8.524870 AGCTTACTGATTTACAATTTTGCTTG 57.475 30.769 0.00 0.00 0.00 4.01
1415 1715 0.182299 GGAGCTTCCTGAGGATTGGG 59.818 60.000 0.04 0.00 32.53 4.12
1417 1717 1.454663 GCTTCCTGAGGATTGGGGC 60.455 63.158 0.04 0.00 0.00 5.80
1589 1919 1.690893 TGCCTATCAGCCTCTAAGCAG 59.309 52.381 0.00 0.00 34.23 4.24
1599 1929 2.634940 GCCTCTAAGCAGGATATGACCA 59.365 50.000 0.00 0.00 35.20 4.02
1735 2067 3.129638 AGAGAAGATAGTTCTCACGGTGC 59.870 47.826 15.32 0.00 45.48 5.01
1854 2209 3.316588 TCGCAAACAGCAAATAGAAACCA 59.683 39.130 0.00 0.00 46.13 3.67
1955 2310 3.514777 TGCAACTAAGACGGCAGAG 57.485 52.632 0.00 0.00 0.00 3.35
2009 2364 2.476619 CACAGTTTCAAGGAGTACTGCG 59.523 50.000 8.90 0.00 41.22 5.18
2442 3148 4.415881 TGCACCTTTATATCCGTCATGT 57.584 40.909 0.00 0.00 0.00 3.21
2461 3167 0.899720 TTGGTAAGTAGGGTCCTGCG 59.100 55.000 0.00 0.00 33.85 5.18
2687 3580 7.809806 AGTTAGCTTTCATTCATGTACTTTTGC 59.190 33.333 0.00 0.00 0.00 3.68
2861 3754 9.803130 CAATTATATGCGTGAGAATCTTGTAAG 57.197 33.333 0.00 0.00 34.92 2.34
3088 3981 2.203625 TTGCCCAGCTTCCCAACC 60.204 61.111 0.00 0.00 0.00 3.77
3604 4497 5.468746 GTCACTCAGGTACATGCAAAGTTTA 59.531 40.000 1.79 0.00 0.00 2.01
3643 4536 3.640967 AGACCCACAATTGCAGCTTAAAA 59.359 39.130 5.05 0.00 0.00 1.52
3663 4556 9.673454 CTTAAAAGTTTAAGTATGGTGTGGTTC 57.327 33.333 13.22 0.00 42.78 3.62
3857 4750 3.135348 TCTGGTCTCCTTAATGCTGGATG 59.865 47.826 0.00 0.00 0.00 3.51
3874 4767 2.100197 GATGGGGCCAAACCTTACTTC 58.900 52.381 4.39 0.00 39.10 3.01
3885 4778 5.105756 CCAAACCTTACTTCCACATGATTCC 60.106 44.000 0.00 0.00 0.00 3.01
3931 4824 2.893637 ACACAGGAAGATGTATCGCAC 58.106 47.619 0.00 0.00 0.00 5.34
3938 4831 6.209589 ACAGGAAGATGTATCGCACTACATAT 59.790 38.462 7.86 3.29 41.31 1.78
3967 4860 3.491447 CCTTGGTTTGAAGTTTCTGCCAG 60.491 47.826 0.00 0.00 0.00 4.85
3970 4863 2.294512 GGTTTGAAGTTTCTGCCAGAGG 59.705 50.000 0.00 0.00 0.00 3.69
4166 5065 0.683179 TAGGGTTAGCGAGCTCAGCA 60.683 55.000 25.12 13.03 37.01 4.41
4192 5091 5.046529 GGTCTTACTGATCAGTATGCTGTG 58.953 45.833 31.03 18.09 42.83 3.66
4467 5376 1.464997 CGGTGCTTCTTTAGGTCTTGC 59.535 52.381 0.00 0.00 0.00 4.01
4695 5742 3.161866 GGCTTGGGAAAACATGGAACTA 58.838 45.455 0.00 0.00 0.00 2.24
4802 5849 1.610522 ACTCATTTGTGGTTGCAGAGC 59.389 47.619 0.00 0.00 0.00 4.09
5091 6141 0.618968 CCTACCCAGGGAGCAGAACT 60.619 60.000 14.54 0.00 38.41 3.01
5115 6165 8.996271 ACTTTGTTATTGCTACTGTTTACTACC 58.004 33.333 0.00 0.00 0.00 3.18
5124 6174 1.479730 CTGTTTACTACCCCCTCCGTC 59.520 57.143 0.00 0.00 0.00 4.79
5127 6177 1.517538 TTACTACCCCCTCCGTCCCA 61.518 60.000 0.00 0.00 0.00 4.37
5130 6180 1.151855 TACCCCCTCCGTCCCAAAA 60.152 57.895 0.00 0.00 0.00 2.44
5132 6182 1.386550 CCCCCTCCGTCCCAAAATT 59.613 57.895 0.00 0.00 0.00 1.82
5135 6185 1.272480 CCCCTCCGTCCCAAAATTCTT 60.272 52.381 0.00 0.00 0.00 2.52
5136 6186 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5137 6187 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5138 6188 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5139 6189 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5140 6190 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5141 6191 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5142 6192 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5143 6193 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5144 6194 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5145 6195 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5146 6196 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
5147 6197 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
5148 6198 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
5149 6199 8.359642 TCCCAAAATTCTTGTCTTAGATTTGTG 58.640 33.333 0.00 0.00 28.79 3.33
5150 6200 7.116805 CCCAAAATTCTTGTCTTAGATTTGTGC 59.883 37.037 0.00 0.00 28.79 4.57
5151 6201 7.116805 CCAAAATTCTTGTCTTAGATTTGTGCC 59.883 37.037 0.00 0.00 28.79 5.01
5152 6202 7.530426 AAATTCTTGTCTTAGATTTGTGCCT 57.470 32.000 0.00 0.00 0.00 4.75
5153 6203 8.635765 AAATTCTTGTCTTAGATTTGTGCCTA 57.364 30.769 0.00 0.00 0.00 3.93
5154 6204 7.617041 ATTCTTGTCTTAGATTTGTGCCTAC 57.383 36.000 0.00 0.00 0.00 3.18
5155 6205 5.488341 TCTTGTCTTAGATTTGTGCCTACC 58.512 41.667 0.00 0.00 0.00 3.18
5156 6206 4.216411 TGTCTTAGATTTGTGCCTACCC 57.784 45.455 0.00 0.00 0.00 3.69
5157 6207 3.585289 TGTCTTAGATTTGTGCCTACCCA 59.415 43.478 0.00 0.00 0.00 4.51
5158 6208 4.192317 GTCTTAGATTTGTGCCTACCCAG 58.808 47.826 0.00 0.00 0.00 4.45
5159 6209 3.199946 TCTTAGATTTGTGCCTACCCAGG 59.800 47.826 0.00 0.00 45.77 4.45
5160 6210 0.625849 AGATTTGTGCCTACCCAGGG 59.374 55.000 2.85 2.85 42.88 4.45
5161 6211 0.623723 GATTTGTGCCTACCCAGGGA 59.376 55.000 14.54 0.00 42.88 4.20
5162 6212 0.625849 ATTTGTGCCTACCCAGGGAG 59.374 55.000 14.54 5.16 44.00 4.30
5163 6213 2.137177 TTTGTGCCTACCCAGGGAGC 62.137 60.000 14.54 12.74 44.00 4.70
5164 6214 3.009115 GTGCCTACCCAGGGAGCA 61.009 66.667 14.54 15.41 44.00 4.26
5165 6215 2.688666 TGCCTACCCAGGGAGCAG 60.689 66.667 14.54 6.00 42.88 4.24
5166 6216 2.365635 GCCTACCCAGGGAGCAGA 60.366 66.667 14.54 0.00 42.88 4.26
5167 6217 1.995626 GCCTACCCAGGGAGCAGAA 60.996 63.158 14.54 0.00 42.88 3.02
5168 6218 1.908483 CCTACCCAGGGAGCAGAAC 59.092 63.158 14.54 0.00 38.41 3.01
5169 6219 0.618968 CCTACCCAGGGAGCAGAACT 60.619 60.000 14.54 0.00 38.41 3.01
5170 6220 1.280457 CTACCCAGGGAGCAGAACTT 58.720 55.000 14.54 0.00 0.00 2.66
5171 6221 1.630878 CTACCCAGGGAGCAGAACTTT 59.369 52.381 14.54 0.00 0.00 2.66
5172 6222 0.111253 ACCCAGGGAGCAGAACTTTG 59.889 55.000 14.54 0.00 0.00 2.77
5173 6223 0.111253 CCCAGGGAGCAGAACTTTGT 59.889 55.000 0.00 0.00 0.00 2.83
5174 6224 1.479389 CCCAGGGAGCAGAACTTTGTT 60.479 52.381 0.00 0.00 0.00 2.83
5175 6225 2.224769 CCCAGGGAGCAGAACTTTGTTA 60.225 50.000 0.00 0.00 0.00 2.41
5176 6226 3.562176 CCCAGGGAGCAGAACTTTGTTAT 60.562 47.826 0.00 0.00 0.00 1.89
5177 6227 4.082125 CCAGGGAGCAGAACTTTGTTATT 58.918 43.478 0.00 0.00 0.00 1.40
5178 6228 4.082571 CCAGGGAGCAGAACTTTGTTATTG 60.083 45.833 0.00 0.00 0.00 1.90
5179 6229 3.507622 AGGGAGCAGAACTTTGTTATTGC 59.492 43.478 9.77 9.77 0.00 3.56
5180 6230 3.507622 GGGAGCAGAACTTTGTTATTGCT 59.492 43.478 16.39 16.39 43.88 3.91
5181 6231 4.700213 GGGAGCAGAACTTTGTTATTGCTA 59.300 41.667 16.40 0.00 41.52 3.49
5182 6232 5.392057 GGGAGCAGAACTTTGTTATTGCTAC 60.392 44.000 16.62 16.62 41.52 3.58
5183 6233 5.412904 GGAGCAGAACTTTGTTATTGCTACT 59.587 40.000 17.19 3.52 41.52 2.57
5184 6234 6.246420 AGCAGAACTTTGTTATTGCTACTG 57.754 37.500 15.45 0.00 39.85 2.74
5185 6235 5.765182 AGCAGAACTTTGTTATTGCTACTGT 59.235 36.000 15.45 0.00 39.85 3.55
5186 6236 6.263168 AGCAGAACTTTGTTATTGCTACTGTT 59.737 34.615 15.45 0.00 39.85 3.16
5187 6237 6.918022 GCAGAACTTTGTTATTGCTACTGTTT 59.082 34.615 10.25 0.00 0.00 2.83
5188 6238 8.073768 GCAGAACTTTGTTATTGCTACTGTTTA 58.926 33.333 10.25 0.00 0.00 2.01
5189 6239 9.382244 CAGAACTTTGTTATTGCTACTGTTTAC 57.618 33.333 0.00 0.00 0.00 2.01
5190 6240 9.338622 AGAACTTTGTTATTGCTACTGTTTACT 57.661 29.630 0.00 0.00 0.00 2.24
5193 6243 8.996271 ACTTTGTTATTGCTACTGTTTACTACC 58.004 33.333 0.00 0.00 0.00 3.18
5194 6244 7.910441 TTGTTATTGCTACTGTTTACTACCC 57.090 36.000 0.00 0.00 0.00 3.69
5195 6245 6.408869 TGTTATTGCTACTGTTTACTACCCC 58.591 40.000 0.00 0.00 0.00 4.95
5196 6246 3.986996 TTGCTACTGTTTACTACCCCC 57.013 47.619 0.00 0.00 0.00 5.40
5197 6247 3.194904 TGCTACTGTTTACTACCCCCT 57.805 47.619 0.00 0.00 0.00 4.79
5198 6248 3.102204 TGCTACTGTTTACTACCCCCTC 58.898 50.000 0.00 0.00 0.00 4.30
5199 6249 2.433604 GCTACTGTTTACTACCCCCTCC 59.566 54.545 0.00 0.00 0.00 4.30
5200 6250 1.565067 ACTGTTTACTACCCCCTCCG 58.435 55.000 0.00 0.00 0.00 4.63
5201 6251 1.203225 ACTGTTTACTACCCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
5202 6252 1.479730 CTGTTTACTACCCCCTCCGTC 59.520 57.143 0.00 0.00 0.00 4.79
5203 6253 0.826715 GTTTACTACCCCCTCCGTCC 59.173 60.000 0.00 0.00 0.00 4.79
5204 6254 0.325577 TTTACTACCCCCTCCGTCCC 60.326 60.000 0.00 0.00 0.00 4.46
5205 6255 1.517538 TTACTACCCCCTCCGTCCCA 61.518 60.000 0.00 0.00 0.00 4.37
5206 6256 1.517538 TACTACCCCCTCCGTCCCAA 61.518 60.000 0.00 0.00 0.00 4.12
5207 6257 1.614226 CTACCCCCTCCGTCCCAAA 60.614 63.158 0.00 0.00 0.00 3.28
5208 6258 1.151855 TACCCCCTCCGTCCCAAAA 60.152 57.895 0.00 0.00 0.00 2.44
5209 6259 0.550638 TACCCCCTCCGTCCCAAAAT 60.551 55.000 0.00 0.00 0.00 1.82
5210 6260 1.386550 CCCCCTCCGTCCCAAAATT 59.613 57.895 0.00 0.00 0.00 1.82
5256 6306 8.792831 ATACGGATGTATCTAACACTAAAACG 57.207 34.615 0.00 0.00 42.09 3.60
5257 6307 6.624423 ACGGATGTATCTAACACTAAAACGT 58.376 36.000 0.00 0.00 42.09 3.99
5258 6308 7.761409 ACGGATGTATCTAACACTAAAACGTA 58.239 34.615 0.00 0.00 42.09 3.57
5259 6309 8.243426 ACGGATGTATCTAACACTAAAACGTAA 58.757 33.333 0.00 0.00 42.09 3.18
5260 6310 8.526681 CGGATGTATCTAACACTAAAACGTAAC 58.473 37.037 0.00 0.00 42.09 2.50
5261 6311 9.578439 GGATGTATCTAACACTAAAACGTAACT 57.422 33.333 0.00 0.00 42.09 2.24
5271 6321 9.578439 AACACTAAAACGTAACTAGATACATCC 57.422 33.333 10.40 0.00 0.00 3.51
5272 6322 7.912250 ACACTAAAACGTAACTAGATACATCCG 59.088 37.037 10.40 0.00 0.00 4.18
5273 6323 7.912250 CACTAAAACGTAACTAGATACATCCGT 59.088 37.037 10.40 0.16 0.00 4.69
5274 6324 9.109393 ACTAAAACGTAACTAGATACATCCGTA 57.891 33.333 10.40 0.00 0.00 4.02
5291 6341 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
5292 6342 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
5293 6343 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
5294 6344 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
5295 6345 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
5296 6346 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
5301 6351 8.958506 TCTAGACAAATCTAAGACAAGTACTCC 58.041 37.037 0.00 0.00 36.98 3.85
5302 6352 6.937392 AGACAAATCTAAGACAAGTACTCCC 58.063 40.000 0.00 0.00 31.46 4.30
5303 6353 6.726764 AGACAAATCTAAGACAAGTACTCCCT 59.273 38.462 0.00 0.00 31.46 4.20
5304 6354 6.937392 ACAAATCTAAGACAAGTACTCCCTC 58.063 40.000 0.00 0.00 0.00 4.30
5305 6355 6.070710 ACAAATCTAAGACAAGTACTCCCTCC 60.071 42.308 0.00 0.00 0.00 4.30
5306 6356 3.618351 TCTAAGACAAGTACTCCCTCCG 58.382 50.000 0.00 0.00 0.00 4.63
5307 6357 2.305858 AAGACAAGTACTCCCTCCGT 57.694 50.000 0.00 0.00 0.00 4.69
5308 6358 1.836802 AGACAAGTACTCCCTCCGTC 58.163 55.000 0.00 0.00 0.00 4.79
5309 6359 0.816373 GACAAGTACTCCCTCCGTCC 59.184 60.000 0.00 0.00 0.00 4.79
5310 6360 0.614134 ACAAGTACTCCCTCCGTCCC 60.614 60.000 0.00 0.00 0.00 4.46
5311 6361 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
5312 6362 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
5313 6363 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
5314 6364 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
5315 6365 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
5316 6366 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5317 6367 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5318 6368 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5319 6369 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5320 6370 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5321 6371 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5322 6372 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5323 6373 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
5324 6374 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
5325 6375 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
5326 6376 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
5327 6377 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
5328 6378 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
5329 6379 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
5330 6380 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
5331 6381 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
5332 6382 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
5333 6383 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
5334 6384 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
5342 6392 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
5343 6393 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
5344 6394 7.928103 TGTCTTAGATTTGTCTAGATACGGAC 58.072 38.462 0.00 0.00 0.00 4.79
5345 6395 7.555195 TGTCTTAGATTTGTCTAGATACGGACA 59.445 37.037 0.00 0.00 40.17 4.02
5346 6396 8.404000 GTCTTAGATTTGTCTAGATACGGACAA 58.596 37.037 0.00 4.69 46.42 3.18
5354 6404 7.827819 TGTCTAGATACGGACAAGAATTTTG 57.172 36.000 0.00 0.00 39.16 2.44
5355 6405 6.816640 TGTCTAGATACGGACAAGAATTTTGG 59.183 38.462 0.00 0.00 39.16 3.28
5356 6406 6.258068 GTCTAGATACGGACAAGAATTTTGGG 59.742 42.308 0.00 0.00 33.19 4.12
5357 6407 5.174037 AGATACGGACAAGAATTTTGGGA 57.826 39.130 0.00 0.00 0.00 4.37
5358 6408 4.941873 AGATACGGACAAGAATTTTGGGAC 59.058 41.667 0.00 0.00 0.00 4.46
5359 6409 1.877443 ACGGACAAGAATTTTGGGACG 59.123 47.619 0.00 0.00 0.00 4.79
5360 6410 1.199097 CGGACAAGAATTTTGGGACGG 59.801 52.381 0.00 0.00 0.00 4.79
5361 6411 2.510613 GGACAAGAATTTTGGGACGGA 58.489 47.619 0.00 0.00 0.00 4.69
5362 6412 2.488153 GGACAAGAATTTTGGGACGGAG 59.512 50.000 0.00 0.00 0.00 4.63
5363 6413 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5364 6414 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5365 6415 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
5366 6416 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
5367 6417 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
5368 6418 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5369 6419 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
5370 6420 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
5371 6421 0.115745 TTGGGACGGAGGGAGTACTT 59.884 55.000 0.00 0.00 0.00 2.24
5372 6422 0.613853 TGGGACGGAGGGAGTACTTG 60.614 60.000 0.00 0.00 0.00 3.16
5373 6423 0.614134 GGGACGGAGGGAGTACTTGT 60.614 60.000 0.00 0.00 0.00 3.16
5374 6424 0.816373 GGACGGAGGGAGTACTTGTC 59.184 60.000 0.00 0.00 0.00 3.18
5375 6425 1.616456 GGACGGAGGGAGTACTTGTCT 60.616 57.143 0.00 0.00 0.00 3.41
5376 6426 2.169330 GACGGAGGGAGTACTTGTCTT 58.831 52.381 0.00 0.00 0.00 3.01
5377 6427 3.350833 GACGGAGGGAGTACTTGTCTTA 58.649 50.000 0.00 0.00 0.00 2.10
5378 6428 3.354467 ACGGAGGGAGTACTTGTCTTAG 58.646 50.000 0.00 0.00 0.00 2.18
5379 6429 3.009916 ACGGAGGGAGTACTTGTCTTAGA 59.990 47.826 0.00 0.00 0.00 2.10
5380 6430 4.208746 CGGAGGGAGTACTTGTCTTAGAT 58.791 47.826 0.00 0.00 0.00 1.98
5381 6431 4.645588 CGGAGGGAGTACTTGTCTTAGATT 59.354 45.833 0.00 0.00 0.00 2.40
5382 6432 5.127356 CGGAGGGAGTACTTGTCTTAGATTT 59.873 44.000 0.00 0.00 0.00 2.17
5383 6433 6.342111 GGAGGGAGTACTTGTCTTAGATTTG 58.658 44.000 0.00 0.00 0.00 2.32
5384 6434 6.070710 GGAGGGAGTACTTGTCTTAGATTTGT 60.071 42.308 0.00 0.00 0.00 2.83
5560 6618 2.641197 GGTGCGACCAAACCTCAAT 58.359 52.632 0.00 0.00 38.42 2.57
5569 6627 5.116180 CGACCAAACCTCAATTATGCTCTA 58.884 41.667 0.00 0.00 0.00 2.43
5570 6628 5.235186 CGACCAAACCTCAATTATGCTCTAG 59.765 44.000 0.00 0.00 0.00 2.43
5571 6629 6.067217 ACCAAACCTCAATTATGCTCTAGT 57.933 37.500 0.00 0.00 0.00 2.57
5572 6630 5.882557 ACCAAACCTCAATTATGCTCTAGTG 59.117 40.000 0.00 0.00 0.00 2.74
5573 6631 5.882557 CCAAACCTCAATTATGCTCTAGTGT 59.117 40.000 0.00 0.00 0.00 3.55
5574 6632 6.375455 CCAAACCTCAATTATGCTCTAGTGTT 59.625 38.462 0.00 0.00 0.00 3.32
5575 6633 7.094205 CCAAACCTCAATTATGCTCTAGTGTTT 60.094 37.037 0.00 0.00 0.00 2.83
5576 6634 7.617041 AACCTCAATTATGCTCTAGTGTTTC 57.383 36.000 0.00 0.00 0.00 2.78
5577 6635 6.951971 ACCTCAATTATGCTCTAGTGTTTCT 58.048 36.000 0.00 0.00 0.00 2.52
5578 6636 8.079211 ACCTCAATTATGCTCTAGTGTTTCTA 57.921 34.615 0.00 0.00 0.00 2.10
5579 6637 8.709308 ACCTCAATTATGCTCTAGTGTTTCTAT 58.291 33.333 0.00 0.00 0.00 1.98
5580 6638 8.986847 CCTCAATTATGCTCTAGTGTTTCTATG 58.013 37.037 0.00 0.00 0.00 2.23
5581 6639 8.893219 TCAATTATGCTCTAGTGTTTCTATGG 57.107 34.615 0.00 0.00 0.00 2.74
5582 6640 8.486210 TCAATTATGCTCTAGTGTTTCTATGGT 58.514 33.333 0.00 0.00 0.00 3.55
5583 6641 8.554528 CAATTATGCTCTAGTGTTTCTATGGTG 58.445 37.037 0.00 0.00 0.00 4.17
5584 6642 3.861840 TGCTCTAGTGTTTCTATGGTGC 58.138 45.455 0.00 0.00 0.00 5.01
5585 6643 2.860735 GCTCTAGTGTTTCTATGGTGCG 59.139 50.000 0.00 0.00 0.00 5.34
5586 6644 3.428999 GCTCTAGTGTTTCTATGGTGCGA 60.429 47.826 0.00 0.00 0.00 5.10
5587 6645 4.106029 TCTAGTGTTTCTATGGTGCGAC 57.894 45.455 0.00 0.00 0.00 5.19
5588 6646 2.094762 AGTGTTTCTATGGTGCGACC 57.905 50.000 0.00 0.00 39.22 4.79
5599 6657 0.818040 GGTGCGACCAAACCTCAAGT 60.818 55.000 0.00 0.00 38.42 3.16
5603 6661 1.130561 GCGACCAAACCTCAAGTATGC 59.869 52.381 0.00 0.00 0.00 3.14
5604 6662 2.699954 CGACCAAACCTCAAGTATGCT 58.300 47.619 0.00 0.00 0.00 3.79
5645 6703 0.027979 CGCCATGTATCTTTGCACCG 59.972 55.000 0.00 0.00 0.00 4.94
5674 6914 1.022735 CGTACATACCGGAGCACTCT 58.977 55.000 9.46 0.00 0.00 3.24
5827 7070 6.416631 TCATTTGAATTGGATGTTGGACAA 57.583 33.333 0.00 0.00 0.00 3.18
5884 7127 3.135348 AGCCAGATACTGCTATTTCTGCA 59.865 43.478 0.00 0.00 35.38 4.41
6045 7295 8.330302 GCATAGTTTTGATATCATTTTTGTGGC 58.670 33.333 6.17 1.83 0.00 5.01
6060 7310 6.676237 TTTTGTGGCTTTCCATTCTTTTTC 57.324 33.333 0.00 0.00 45.62 2.29
6157 7409 6.422776 AATGAGAAATTTACGCATCTTCGT 57.577 33.333 0.00 0.00 45.49 3.85
6167 7419 4.327854 ACGCATCTTCGTTTTCATCTTC 57.672 40.909 0.00 0.00 40.07 2.87
6251 7504 7.987750 TGTTCTAAATACAAGTTGGTATGCA 57.012 32.000 7.96 0.00 34.32 3.96
6288 7541 4.944962 TTGCTGAACTTCATAACATCCG 57.055 40.909 0.00 0.00 0.00 4.18
6337 10006 6.815089 TGAACAATGTTGGATACTTTTTGCT 58.185 32.000 2.20 0.00 37.61 3.91
6359 10028 9.645059 TTGCTGATATTCTATATGTAGACTTGC 57.355 33.333 0.00 0.32 36.69 4.01
6369 10038 9.817809 TCTATATGTAGACTTGCAAGGTTAAAG 57.182 33.333 29.18 14.09 32.04 1.85
6387 10056 7.226128 AGGTTAAAGCAAACTATAGGTAATCGC 59.774 37.037 4.43 0.00 30.12 4.58
6388 10057 7.011669 GGTTAAAGCAAACTATAGGTAATCGCA 59.988 37.037 4.43 0.00 0.00 5.10
6389 10058 6.995511 AAAGCAAACTATAGGTAATCGCAA 57.004 33.333 4.43 0.00 0.00 4.85
6390 10059 6.995511 AAGCAAACTATAGGTAATCGCAAA 57.004 33.333 4.43 0.00 0.00 3.68
6391 10060 6.995511 AGCAAACTATAGGTAATCGCAAAA 57.004 33.333 4.43 0.00 0.00 2.44
6392 10061 7.385778 AGCAAACTATAGGTAATCGCAAAAA 57.614 32.000 4.43 0.00 0.00 1.94
6503 10172 2.571212 ACATTGTCACGACACACCAAT 58.429 42.857 0.00 0.00 41.67 3.16
6523 10192 4.989279 ATGTTTTGTCAGCACAAGAACT 57.011 36.364 12.02 0.00 43.54 3.01
6524 10193 4.782019 TGTTTTGTCAGCACAAGAACTT 57.218 36.364 12.02 0.00 43.54 2.66
6535 10204 3.676093 CACAAGAACTTAAGGAGACCCC 58.324 50.000 7.53 0.00 0.00 4.95
6574 10243 7.678947 TTTCCGGTTACCGTTGATTTAATAA 57.321 32.000 22.78 1.34 46.80 1.40
6614 10283 6.449698 AGAATTCTGGCTATTTTTGTGTGTG 58.550 36.000 7.30 0.00 0.00 3.82
6615 10284 5.789643 ATTCTGGCTATTTTTGTGTGTGT 57.210 34.783 0.00 0.00 0.00 3.72
6617 10286 5.181690 TCTGGCTATTTTTGTGTGTGTTC 57.818 39.130 0.00 0.00 0.00 3.18
6622 10291 6.149633 GGCTATTTTTGTGTGTGTTCTTAGG 58.850 40.000 0.00 0.00 0.00 2.69
6630 10299 2.101082 TGTGTGTTCTTAGGTGCACGTA 59.899 45.455 14.99 14.99 34.86 3.57
6645 10314 3.671459 TGCACGTACACGAATACTTCTTG 59.329 43.478 9.04 0.00 43.02 3.02
6649 10318 4.682860 ACGTACACGAATACTTCTTGGTTG 59.317 41.667 9.04 0.00 43.02 3.77
6654 10323 5.408604 ACACGAATACTTCTTGGTTGTCATC 59.591 40.000 0.00 0.00 33.63 2.92
6655 10324 5.408299 CACGAATACTTCTTGGTTGTCATCA 59.592 40.000 0.00 0.00 0.00 3.07
6669 10338 3.130633 TGTCATCAACAAGGTCAAGTCG 58.869 45.455 0.00 0.00 34.03 4.18
6674 10343 0.250338 AACAAGGTCAAGTCGGCTCC 60.250 55.000 0.00 0.00 0.00 4.70
6729 10399 2.099921 CTCATTCTGACGAGGGTAGTGG 59.900 54.545 0.00 0.00 0.00 4.00
6731 10401 2.005370 TTCTGACGAGGGTAGTGGTT 57.995 50.000 0.00 0.00 0.00 3.67
6736 10406 0.316204 ACGAGGGTAGTGGTTGTTCG 59.684 55.000 0.00 0.00 0.00 3.95
6742 10412 2.073816 GGTAGTGGTTGTTCGATGGTG 58.926 52.381 0.00 0.00 0.00 4.17
6774 10752 8.334016 TCTCGATGTAATTTTTGTTGTGTTTG 57.666 30.769 0.00 0.00 0.00 2.93
6775 10753 7.971168 TCTCGATGTAATTTTTGTTGTGTTTGT 59.029 29.630 0.00 0.00 0.00 2.83
6776 10754 7.889745 TCGATGTAATTTTTGTTGTGTTTGTG 58.110 30.769 0.00 0.00 0.00 3.33
6777 10755 7.755373 TCGATGTAATTTTTGTTGTGTTTGTGA 59.245 29.630 0.00 0.00 0.00 3.58
6792 10771 6.309980 TGTGTTTGTGATGCTTTGTACTTTTG 59.690 34.615 0.00 0.00 0.00 2.44
6839 10818 2.327568 CTTTTGCGAAAATGCCATCGT 58.672 42.857 0.00 0.00 41.01 3.73
6948 10927 4.576879 AGGGTCGGATGTTTCTAGTTTTC 58.423 43.478 0.00 0.00 0.00 2.29
6964 10943 9.798994 TTCTAGTTTTCGTACAATAGGATTCTC 57.201 33.333 0.00 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.319122 GCAGAGGTTTTTATGCCTATGGG 59.681 47.826 7.23 0.00 42.53 4.00
45 46 0.249447 TGATTGATGCTACCTCGGCG 60.249 55.000 0.00 0.00 0.00 6.46
83 84 5.590530 TGGTTGCATAATACCAAATCCAC 57.409 39.130 5.49 0.00 41.30 4.02
87 88 6.381250 ACCCTATGGTTGCATAATACCAAAT 58.619 36.000 11.86 0.00 44.75 2.32
113 114 1.577729 TCCCCTGAGAGGAGATGATGT 59.422 52.381 0.00 0.00 37.67 3.06
133 134 2.761786 ATATGGGCTGACAATTGGCT 57.238 45.000 13.62 0.00 0.00 4.75
157 158 2.548480 GGACAGGCAACAGAGTTACAAC 59.452 50.000 0.00 0.00 41.41 3.32
163 164 1.367840 GACGGACAGGCAACAGAGT 59.632 57.895 0.00 0.00 41.41 3.24
168 169 1.810030 GATCGGACGGACAGGCAAC 60.810 63.158 0.00 0.00 0.00 4.17
173 174 1.433879 GGTCTGATCGGACGGACAG 59.566 63.158 24.89 10.79 44.95 3.51
177 178 2.808315 CAGGGTCTGATCGGACGG 59.192 66.667 24.89 14.83 37.12 4.79
182 183 3.372206 CACTTTAAAGCAGGGTCTGATCG 59.628 47.826 15.24 0.00 32.44 3.69
193 194 4.505039 GGAGGGAAGAGACACTTTAAAGCA 60.505 45.833 15.24 0.00 39.13 3.91
198 199 7.202011 GCTATTATGGAGGGAAGAGACACTTTA 60.202 40.741 0.00 0.00 39.13 1.85
218 219 5.188555 CCAAGCCAGATATGGAGAGCTATTA 59.811 44.000 11.49 0.00 36.27 0.98
240 241 1.615424 GGAGTTAGGAGGCCACCCA 60.615 63.158 16.55 0.00 0.00 4.51
286 287 5.048643 GTGCTCGGCTTCTCAAGAGTATATA 60.049 44.000 0.00 0.00 33.57 0.86
291 292 0.037790 GTGCTCGGCTTCTCAAGAGT 60.038 55.000 0.00 0.00 33.57 3.24
322 323 2.491621 GCGGCTCCTGCAAAATCC 59.508 61.111 0.00 0.00 41.91 3.01
353 354 4.053295 GCTATTTAACATGGCAATGCTGG 58.947 43.478 4.82 0.00 37.29 4.85
362 363 9.883142 TTAAAGATTTTGGGCTATTTAACATGG 57.117 29.630 0.00 0.00 0.00 3.66
365 366 9.430623 GCTTTAAAGATTTTGGGCTATTTAACA 57.569 29.630 19.48 0.00 0.00 2.41
376 377 9.487790 TGTTGATTTAGGCTTTAAAGATTTTGG 57.512 29.630 19.48 0.00 0.00 3.28
436 437 1.737793 GTAAATGGAAGCCACACGAGG 59.262 52.381 0.00 0.00 35.80 4.63
462 463 7.651304 TGTGTGAACATTTGAACATGTTAATCC 59.349 33.333 11.95 0.00 45.55 3.01
463 464 8.572828 TGTGTGAACATTTGAACATGTTAATC 57.427 30.769 11.95 0.00 45.55 1.75
476 499 5.376625 TCCTAGAAGCTTGTGTGAACATTT 58.623 37.500 2.10 0.00 0.00 2.32
539 562 9.463443 CGATCAAGAAGAAAAATGGTTACTTTT 57.537 29.630 0.00 0.00 0.00 2.27
540 563 8.846211 TCGATCAAGAAGAAAAATGGTTACTTT 58.154 29.630 0.00 0.00 0.00 2.66
541 564 8.391075 TCGATCAAGAAGAAAAATGGTTACTT 57.609 30.769 0.00 0.00 0.00 2.24
542 565 7.361286 GCTCGATCAAGAAGAAAAATGGTTACT 60.361 37.037 0.00 0.00 0.00 2.24
543 566 6.743172 GCTCGATCAAGAAGAAAAATGGTTAC 59.257 38.462 0.00 0.00 0.00 2.50
544 567 6.429692 TGCTCGATCAAGAAGAAAAATGGTTA 59.570 34.615 0.00 0.00 0.00 2.85
545 568 5.241506 TGCTCGATCAAGAAGAAAAATGGTT 59.758 36.000 0.00 0.00 0.00 3.67
546 569 4.761739 TGCTCGATCAAGAAGAAAAATGGT 59.238 37.500 0.00 0.00 0.00 3.55
547 570 5.300969 TGCTCGATCAAGAAGAAAAATGG 57.699 39.130 0.00 0.00 0.00 3.16
548 571 8.900511 TTTATGCTCGATCAAGAAGAAAAATG 57.099 30.769 0.00 0.00 0.00 2.32
549 572 9.565213 CTTTTATGCTCGATCAAGAAGAAAAAT 57.435 29.630 0.00 0.00 0.00 1.82
550 573 8.783093 TCTTTTATGCTCGATCAAGAAGAAAAA 58.217 29.630 0.00 0.00 0.00 1.94
551 574 8.322906 TCTTTTATGCTCGATCAAGAAGAAAA 57.677 30.769 8.79 0.00 0.00 2.29
552 575 7.905604 TCTTTTATGCTCGATCAAGAAGAAA 57.094 32.000 8.79 0.00 0.00 2.52
553 576 7.905604 TTCTTTTATGCTCGATCAAGAAGAA 57.094 32.000 15.17 15.17 0.00 2.52
554 577 7.225538 GGATTCTTTTATGCTCGATCAAGAAGA 59.774 37.037 7.09 7.41 34.59 2.87
555 578 7.351223 GGATTCTTTTATGCTCGATCAAGAAG 58.649 38.462 7.09 5.66 34.59 2.85
659 682 5.823570 GCTTAAACTAATCTTTCTCCTCCCC 59.176 44.000 0.00 0.00 0.00 4.81
663 686 6.830838 CCATGGCTTAAACTAATCTTTCTCCT 59.169 38.462 0.00 0.00 0.00 3.69
668 692 8.773033 ATGATCCATGGCTTAAACTAATCTTT 57.227 30.769 6.96 0.00 0.00 2.52
748 772 3.814906 TGGTGGTGGTGGTGGTGG 61.815 66.667 0.00 0.00 0.00 4.61
749 773 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
750 774 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
804 847 2.459710 GGGAGGGAAGGGGAGGAA 59.540 66.667 0.00 0.00 0.00 3.36
805 848 2.879490 TGGGAGGGAAGGGGAGGA 60.879 66.667 0.00 0.00 0.00 3.71
806 849 2.367512 CTGGGAGGGAAGGGGAGG 60.368 72.222 0.00 0.00 0.00 4.30
807 850 3.093172 GCTGGGAGGGAAGGGGAG 61.093 72.222 0.00 0.00 0.00 4.30
808 851 3.953652 TGCTGGGAGGGAAGGGGA 61.954 66.667 0.00 0.00 0.00 4.81
809 852 3.732849 GTGCTGGGAGGGAAGGGG 61.733 72.222 0.00 0.00 0.00 4.79
810 853 3.732849 GGTGCTGGGAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
811 854 3.732849 GGGTGCTGGGAGGGAAGG 61.733 72.222 0.00 0.00 0.00 3.46
812 855 3.732849 GGGGTGCTGGGAGGGAAG 61.733 72.222 0.00 0.00 0.00 3.46
835 878 2.524640 GGGATCTCGGGGAGGGAC 60.525 72.222 0.00 0.00 27.95 4.46
1176 1475 0.610687 AAGAAGCGGAAGGAGAGGTG 59.389 55.000 0.00 0.00 0.00 4.00
1300 1599 2.161855 TGCAATGCAACGAGGAGAAAT 58.838 42.857 5.01 0.00 34.76 2.17
1389 1689 2.511145 CAGGAAGCTCCTCTGCGC 60.511 66.667 0.00 0.00 45.66 6.09
1415 1715 2.750888 GCATGTCCGAAACCTCGCC 61.751 63.158 0.00 0.00 44.04 5.54
1417 1717 1.970917 GCAGCATGTCCGAAACCTCG 61.971 60.000 0.00 0.00 41.25 4.63
1599 1929 5.468072 CAGCAATTCTAAACGGAGATATGCT 59.532 40.000 13.63 13.63 43.24 3.79
1735 2067 2.695666 ACACTCTCCATGTTATCCTCGG 59.304 50.000 0.00 0.00 0.00 4.63
1767 2099 8.519799 TGTTTTGAAGGAGAAGATACTTTGTT 57.480 30.769 0.00 0.00 0.00 2.83
1854 2209 8.715088 GTTAGATCTTTTGAATTTTTGCAGCAT 58.285 29.630 0.00 0.00 0.00 3.79
1955 2310 6.316390 CCTGGCTATCCGAATATAATTGTTCC 59.684 42.308 0.00 0.00 34.14 3.62
2009 2364 9.614792 ACTCCTTTATCAGAAATGGTATTGTAC 57.385 33.333 0.00 0.00 0.00 2.90
2250 2842 7.919313 TCAAATACGAATTCGACTGTATACC 57.081 36.000 33.05 0.00 43.02 2.73
2257 2849 4.634443 CCCCTTTCAAATACGAATTCGACT 59.366 41.667 33.05 16.72 43.02 4.18
2442 3148 0.899720 CGCAGGACCCTACTTACCAA 59.100 55.000 0.00 0.00 0.00 3.67
2461 3167 8.254508 AGATGGTGAGACATAACTCTAAACTTC 58.745 37.037 0.00 0.00 37.73 3.01
2687 3580 3.009723 ACATAAGCAACCCAGAATCACG 58.990 45.455 0.00 0.00 0.00 4.35
2861 3754 1.880027 CATAACCATTAGGAAGCCCGC 59.120 52.381 0.00 0.00 38.69 6.13
3088 3981 6.439636 TTCAGATATTGGGGGTGATCTTAG 57.560 41.667 0.00 0.00 0.00 2.18
3357 4250 9.087871 TGAGAAAAATGAAGGATTTGGATGTTA 57.912 29.630 0.00 0.00 34.30 2.41
3487 4380 1.734465 GATGCCTCCTCAAAGACAACG 59.266 52.381 0.00 0.00 0.00 4.10
3514 4407 3.223435 TGGTAGAGATAAAGGAGAGCCG 58.777 50.000 0.00 0.00 39.96 5.52
3643 4536 5.313712 CAGGAACCACACCATACTTAAACT 58.686 41.667 0.00 0.00 0.00 2.66
3655 4548 3.509575 TCAATTTATGGCAGGAACCACAC 59.490 43.478 0.00 0.00 44.17 3.82
3656 4549 3.772387 TCAATTTATGGCAGGAACCACA 58.228 40.909 0.00 0.00 44.17 4.17
3663 4556 3.580039 AGGGGAATCAATTTATGGCAGG 58.420 45.455 0.00 0.00 0.00 4.85
3754 4647 6.791887 AAGATGGATAACAGCGATAACATG 57.208 37.500 0.00 0.00 41.32 3.21
3857 4750 0.113580 TGGAAGTAAGGTTTGGCCCC 59.886 55.000 0.00 0.00 38.26 5.80
3915 4808 6.842437 ATATGTAGTGCGATACATCTTCCT 57.158 37.500 14.80 0.00 43.61 3.36
3938 4831 7.389607 GCAGAAACTTCAAACCAAGGTATAGTA 59.610 37.037 0.00 0.00 0.00 1.82
3967 4860 5.625150 AGATATATGGAAACTGTTGGCCTC 58.375 41.667 3.32 0.00 0.00 4.70
3970 4863 8.451908 ACTTAAGATATATGGAAACTGTTGGC 57.548 34.615 10.09 0.00 0.00 4.52
4166 5065 4.959210 AGCATACTGATCAGTAAGACCAGT 59.041 41.667 33.30 16.44 45.87 4.00
4467 5376 0.526954 GCGAGGCATGGAAAATGCAG 60.527 55.000 12.01 4.46 46.21 4.41
5091 6141 7.391275 GGGGTAGTAAACAGTAGCAATAACAAA 59.609 37.037 0.00 0.00 0.00 2.83
5115 6165 0.331616 AGAATTTTGGGACGGAGGGG 59.668 55.000 0.00 0.00 0.00 4.79
5124 6174 7.116805 GCACAAATCTAAGACAAGAATTTTGGG 59.883 37.037 0.00 0.00 34.31 4.12
5127 6177 7.955918 AGGCACAAATCTAAGACAAGAATTTT 58.044 30.769 0.00 0.00 0.00 1.82
5130 6180 6.599638 GGTAGGCACAAATCTAAGACAAGAAT 59.400 38.462 0.00 0.00 0.00 2.40
5132 6182 5.488341 GGTAGGCACAAATCTAAGACAAGA 58.512 41.667 0.00 0.00 0.00 3.02
5135 6185 3.585289 TGGGTAGGCACAAATCTAAGACA 59.415 43.478 0.00 0.00 0.00 3.41
5136 6186 4.192317 CTGGGTAGGCACAAATCTAAGAC 58.808 47.826 0.00 0.00 0.00 3.01
5137 6187 3.199946 CCTGGGTAGGCACAAATCTAAGA 59.800 47.826 0.00 0.00 37.25 2.10
5138 6188 3.545703 CCTGGGTAGGCACAAATCTAAG 58.454 50.000 0.00 0.00 37.25 2.18
5139 6189 2.241176 CCCTGGGTAGGCACAAATCTAA 59.759 50.000 3.97 0.00 43.16 2.10
5140 6190 1.843851 CCCTGGGTAGGCACAAATCTA 59.156 52.381 3.97 0.00 43.16 1.98
5141 6191 0.625849 CCCTGGGTAGGCACAAATCT 59.374 55.000 3.97 0.00 43.16 2.40
5142 6192 0.623723 TCCCTGGGTAGGCACAAATC 59.376 55.000 13.56 0.00 43.16 2.17
5143 6193 0.625849 CTCCCTGGGTAGGCACAAAT 59.374 55.000 13.56 0.00 43.16 2.32
5144 6194 2.074967 CTCCCTGGGTAGGCACAAA 58.925 57.895 13.56 0.00 43.16 2.83
5145 6195 2.602676 GCTCCCTGGGTAGGCACAA 61.603 63.158 13.56 0.00 43.16 3.33
5146 6196 3.009115 GCTCCCTGGGTAGGCACA 61.009 66.667 13.56 0.00 43.16 4.57
5147 6197 3.009115 TGCTCCCTGGGTAGGCAC 61.009 66.667 20.25 5.08 43.16 5.01
5148 6198 2.688666 CTGCTCCCTGGGTAGGCA 60.689 66.667 21.78 21.78 43.16 4.75
5149 6199 1.995626 TTCTGCTCCCTGGGTAGGC 60.996 63.158 13.56 15.48 43.16 3.93
5150 6200 0.618968 AGTTCTGCTCCCTGGGTAGG 60.619 60.000 13.56 5.73 44.18 3.18
5151 6201 1.280457 AAGTTCTGCTCCCTGGGTAG 58.720 55.000 13.56 10.00 0.00 3.18
5152 6202 1.351017 CAAAGTTCTGCTCCCTGGGTA 59.649 52.381 13.56 0.00 0.00 3.69
5153 6203 0.111253 CAAAGTTCTGCTCCCTGGGT 59.889 55.000 13.56 0.00 0.00 4.51
5154 6204 0.111253 ACAAAGTTCTGCTCCCTGGG 59.889 55.000 6.33 6.33 0.00 4.45
5155 6205 1.986882 AACAAAGTTCTGCTCCCTGG 58.013 50.000 0.00 0.00 0.00 4.45
5156 6206 4.616835 GCAATAACAAAGTTCTGCTCCCTG 60.617 45.833 8.70 0.00 0.00 4.45
5157 6207 3.507622 GCAATAACAAAGTTCTGCTCCCT 59.492 43.478 8.70 0.00 0.00 4.20
5158 6208 3.507622 AGCAATAACAAAGTTCTGCTCCC 59.492 43.478 11.43 0.00 35.25 4.30
5159 6209 4.773323 AGCAATAACAAAGTTCTGCTCC 57.227 40.909 11.43 0.00 35.25 4.70
5160 6210 6.073003 ACAGTAGCAATAACAAAGTTCTGCTC 60.073 38.462 17.41 11.84 40.45 4.26
5161 6211 5.765182 ACAGTAGCAATAACAAAGTTCTGCT 59.235 36.000 17.78 17.78 42.48 4.24
5162 6212 6.002062 ACAGTAGCAATAACAAAGTTCTGC 57.998 37.500 8.15 8.15 0.00 4.26
5163 6213 9.382244 GTAAACAGTAGCAATAACAAAGTTCTG 57.618 33.333 0.00 0.00 0.00 3.02
5164 6214 9.338622 AGTAAACAGTAGCAATAACAAAGTTCT 57.661 29.630 0.00 0.00 0.00 3.01
5167 6217 8.996271 GGTAGTAAACAGTAGCAATAACAAAGT 58.004 33.333 0.00 0.00 0.00 2.66
5168 6218 8.448615 GGGTAGTAAACAGTAGCAATAACAAAG 58.551 37.037 0.00 0.00 0.00 2.77
5169 6219 7.391275 GGGGTAGTAAACAGTAGCAATAACAAA 59.609 37.037 0.00 0.00 0.00 2.83
5170 6220 6.880529 GGGGTAGTAAACAGTAGCAATAACAA 59.119 38.462 0.00 0.00 0.00 2.83
5171 6221 6.408869 GGGGTAGTAAACAGTAGCAATAACA 58.591 40.000 0.00 0.00 0.00 2.41
5172 6222 5.819379 GGGGGTAGTAAACAGTAGCAATAAC 59.181 44.000 0.00 0.00 0.00 1.89
5173 6223 5.727766 AGGGGGTAGTAAACAGTAGCAATAA 59.272 40.000 0.00 0.00 0.00 1.40
5174 6224 5.282946 AGGGGGTAGTAAACAGTAGCAATA 58.717 41.667 0.00 0.00 0.00 1.90
5175 6225 4.109320 AGGGGGTAGTAAACAGTAGCAAT 58.891 43.478 0.00 0.00 0.00 3.56
5176 6226 3.516700 GAGGGGGTAGTAAACAGTAGCAA 59.483 47.826 0.00 0.00 0.00 3.91
5177 6227 3.102204 GAGGGGGTAGTAAACAGTAGCA 58.898 50.000 0.00 0.00 0.00 3.49
5178 6228 2.433604 GGAGGGGGTAGTAAACAGTAGC 59.566 54.545 0.00 0.00 0.00 3.58
5179 6229 2.692041 CGGAGGGGGTAGTAAACAGTAG 59.308 54.545 0.00 0.00 0.00 2.57
5180 6230 2.042979 ACGGAGGGGGTAGTAAACAGTA 59.957 50.000 0.00 0.00 0.00 2.74
5181 6231 1.203225 ACGGAGGGGGTAGTAAACAGT 60.203 52.381 0.00 0.00 0.00 3.55
5182 6232 1.479730 GACGGAGGGGGTAGTAAACAG 59.520 57.143 0.00 0.00 0.00 3.16
5183 6233 1.560505 GACGGAGGGGGTAGTAAACA 58.439 55.000 0.00 0.00 0.00 2.83
5184 6234 0.826715 GGACGGAGGGGGTAGTAAAC 59.173 60.000 0.00 0.00 0.00 2.01
5185 6235 0.325577 GGGACGGAGGGGGTAGTAAA 60.326 60.000 0.00 0.00 0.00 2.01
5186 6236 1.311059 GGGACGGAGGGGGTAGTAA 59.689 63.158 0.00 0.00 0.00 2.24
5187 6237 1.517538 TTGGGACGGAGGGGGTAGTA 61.518 60.000 0.00 0.00 0.00 1.82
5188 6238 2.405522 TTTGGGACGGAGGGGGTAGT 62.406 60.000 0.00 0.00 0.00 2.73
5189 6239 1.202769 TTTTGGGACGGAGGGGGTAG 61.203 60.000 0.00 0.00 0.00 3.18
5190 6240 0.550638 ATTTTGGGACGGAGGGGGTA 60.551 55.000 0.00 0.00 0.00 3.69
5191 6241 1.440362 AATTTTGGGACGGAGGGGGT 61.440 55.000 0.00 0.00 0.00 4.95
5192 6242 0.683179 GAATTTTGGGACGGAGGGGG 60.683 60.000 0.00 0.00 0.00 5.40
5193 6243 0.331616 AGAATTTTGGGACGGAGGGG 59.668 55.000 0.00 0.00 0.00 4.79
5194 6244 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5195 6245 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5196 6246 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5197 6247 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
5198 6248 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
5199 6249 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
5200 6250 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
5201 6251 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
5202 6252 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
5210 6260 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
5234 6284 8.526681 GTTACGTTTTAGTGTTAGATACATCCG 58.473 37.037 0.00 0.00 39.39 4.18
5246 6296 7.912250 CGGATGTATCTAGTTACGTTTTAGTGT 59.088 37.037 0.00 0.00 0.00 3.55
5247 6297 7.912250 ACGGATGTATCTAGTTACGTTTTAGTG 59.088 37.037 0.00 0.00 0.00 2.74
5248 6298 7.989826 ACGGATGTATCTAGTTACGTTTTAGT 58.010 34.615 0.00 3.78 0.00 2.24
5265 6315 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
5266 6316 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
5267 6317 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
5268 6318 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
5269 6319 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
5270 6320 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
5275 6325 8.958506 GGAGTACTTGTCTTAGATTTGTCTAGA 58.041 37.037 0.00 0.00 0.00 2.43
5276 6326 8.192110 GGGAGTACTTGTCTTAGATTTGTCTAG 58.808 40.741 0.00 0.00 0.00 2.43
5277 6327 7.894364 AGGGAGTACTTGTCTTAGATTTGTCTA 59.106 37.037 0.00 0.00 0.00 2.59
5278 6328 6.726764 AGGGAGTACTTGTCTTAGATTTGTCT 59.273 38.462 0.00 0.00 0.00 3.41
5279 6329 6.937392 AGGGAGTACTTGTCTTAGATTTGTC 58.063 40.000 0.00 0.00 0.00 3.18
5280 6330 6.070710 GGAGGGAGTACTTGTCTTAGATTTGT 60.071 42.308 0.00 0.00 0.00 2.83
5281 6331 6.342111 GGAGGGAGTACTTGTCTTAGATTTG 58.658 44.000 0.00 0.00 0.00 2.32
5282 6332 5.127356 CGGAGGGAGTACTTGTCTTAGATTT 59.873 44.000 0.00 0.00 0.00 2.17
5283 6333 4.645588 CGGAGGGAGTACTTGTCTTAGATT 59.354 45.833 0.00 0.00 0.00 2.40
5284 6334 4.208746 CGGAGGGAGTACTTGTCTTAGAT 58.791 47.826 0.00 0.00 0.00 1.98
5285 6335 3.009916 ACGGAGGGAGTACTTGTCTTAGA 59.990 47.826 0.00 0.00 0.00 2.10
5286 6336 3.354467 ACGGAGGGAGTACTTGTCTTAG 58.646 50.000 0.00 0.00 0.00 2.18
5287 6337 3.350833 GACGGAGGGAGTACTTGTCTTA 58.649 50.000 0.00 0.00 0.00 2.10
5288 6338 2.169330 GACGGAGGGAGTACTTGTCTT 58.831 52.381 0.00 0.00 0.00 3.01
5289 6339 1.616456 GGACGGAGGGAGTACTTGTCT 60.616 57.143 0.00 0.00 0.00 3.41
5290 6340 0.816373 GGACGGAGGGAGTACTTGTC 59.184 60.000 0.00 0.00 0.00 3.18
5291 6341 0.614134 GGGACGGAGGGAGTACTTGT 60.614 60.000 0.00 0.00 0.00 3.16
5292 6342 0.613853 TGGGACGGAGGGAGTACTTG 60.614 60.000 0.00 0.00 0.00 3.16
5293 6343 0.115745 TTGGGACGGAGGGAGTACTT 59.884 55.000 0.00 0.00 0.00 2.24
5294 6344 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
5295 6345 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
5296 6346 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
5297 6347 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
5298 6348 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
5299 6349 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
5300 6350 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
5301 6351 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
5302 6352 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5303 6353 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
5304 6354 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
5305 6355 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
5306 6356 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
5307 6357 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
5308 6358 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
5316 6366 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
5317 6367 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
5318 6368 8.404000 GTCCGTATCTAGACAAATCTAAGACAA 58.596 37.037 0.00 0.00 36.98 3.18
5319 6369 7.555195 TGTCCGTATCTAGACAAATCTAAGACA 59.445 37.037 0.00 0.00 39.96 3.41
5320 6370 7.928103 TGTCCGTATCTAGACAAATCTAAGAC 58.072 38.462 0.00 0.00 39.96 3.01
5321 6371 8.515695 TTGTCCGTATCTAGACAAATCTAAGA 57.484 34.615 0.00 0.00 46.93 2.10
5330 6380 6.816640 CCAAAATTCTTGTCCGTATCTAGACA 59.183 38.462 0.00 0.00 41.13 3.41
5331 6381 6.258068 CCCAAAATTCTTGTCCGTATCTAGAC 59.742 42.308 0.00 0.00 0.00 2.59
5332 6382 6.155565 TCCCAAAATTCTTGTCCGTATCTAGA 59.844 38.462 0.00 0.00 0.00 2.43
5333 6383 6.258068 GTCCCAAAATTCTTGTCCGTATCTAG 59.742 42.308 0.00 0.00 0.00 2.43
5334 6384 6.110707 GTCCCAAAATTCTTGTCCGTATCTA 58.889 40.000 0.00 0.00 0.00 1.98
5335 6385 4.941873 GTCCCAAAATTCTTGTCCGTATCT 59.058 41.667 0.00 0.00 0.00 1.98
5336 6386 4.201783 CGTCCCAAAATTCTTGTCCGTATC 60.202 45.833 0.00 0.00 0.00 2.24
5337 6387 3.687698 CGTCCCAAAATTCTTGTCCGTAT 59.312 43.478 0.00 0.00 0.00 3.06
5338 6388 3.068560 CGTCCCAAAATTCTTGTCCGTA 58.931 45.455 0.00 0.00 0.00 4.02
5339 6389 1.877443 CGTCCCAAAATTCTTGTCCGT 59.123 47.619 0.00 0.00 0.00 4.69
5340 6390 1.199097 CCGTCCCAAAATTCTTGTCCG 59.801 52.381 0.00 0.00 0.00 4.79
5341 6391 2.488153 CTCCGTCCCAAAATTCTTGTCC 59.512 50.000 0.00 0.00 0.00 4.02
5342 6392 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
5343 6393 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
5344 6394 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
5345 6395 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
5346 6396 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
5347 6397 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
5348 6398 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
5349 6399 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
5350 6400 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
5351 6401 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
5352 6402 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
5353 6403 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
5354 6404 0.614134 ACAAGTACTCCCTCCGTCCC 60.614 60.000 0.00 0.00 0.00 4.46
5355 6405 0.816373 GACAAGTACTCCCTCCGTCC 59.184 60.000 0.00 0.00 0.00 4.79
5356 6406 1.836802 AGACAAGTACTCCCTCCGTC 58.163 55.000 0.00 0.00 0.00 4.79
5357 6407 2.305858 AAGACAAGTACTCCCTCCGT 57.694 50.000 0.00 0.00 0.00 4.69
5358 6408 3.618351 TCTAAGACAAGTACTCCCTCCG 58.382 50.000 0.00 0.00 0.00 4.63
5359 6409 6.070710 ACAAATCTAAGACAAGTACTCCCTCC 60.071 42.308 0.00 0.00 0.00 4.30
5360 6410 6.814146 CACAAATCTAAGACAAGTACTCCCTC 59.186 42.308 0.00 0.00 0.00 4.30
5361 6411 6.270231 ACACAAATCTAAGACAAGTACTCCCT 59.730 38.462 0.00 0.00 0.00 4.20
5362 6412 6.465084 ACACAAATCTAAGACAAGTACTCCC 58.535 40.000 0.00 0.00 0.00 4.30
5363 6413 9.303537 GATACACAAATCTAAGACAAGTACTCC 57.696 37.037 0.00 0.00 0.00 3.85
5383 6433 7.864307 AACAGTAAAACGTGTCTAGATACAC 57.136 36.000 18.39 11.67 45.10 2.90
5384 6434 9.002600 TCTAACAGTAAAACGTGTCTAGATACA 57.997 33.333 18.39 0.27 0.00 2.29
5560 6618 6.049149 GCACCATAGAAACACTAGAGCATAA 58.951 40.000 0.00 0.00 34.35 1.90
5569 6627 1.346395 TGGTCGCACCATAGAAACACT 59.654 47.619 4.16 0.00 44.79 3.55
5570 6628 1.803334 TGGTCGCACCATAGAAACAC 58.197 50.000 4.16 0.00 44.79 3.32
5580 6638 0.818040 ACTTGAGGTTTGGTCGCACC 60.818 55.000 0.00 0.00 39.22 5.01
5581 6639 1.873698 TACTTGAGGTTTGGTCGCAC 58.126 50.000 0.00 0.00 0.00 5.34
5582 6640 2.422597 CATACTTGAGGTTTGGTCGCA 58.577 47.619 0.00 0.00 0.00 5.10
5583 6641 1.130561 GCATACTTGAGGTTTGGTCGC 59.869 52.381 0.00 0.00 0.00 5.19
5584 6642 2.673368 GAGCATACTTGAGGTTTGGTCG 59.327 50.000 2.18 0.00 41.60 4.79
5585 6643 3.686726 CAGAGCATACTTGAGGTTTGGTC 59.313 47.826 8.77 8.77 46.79 4.02
5586 6644 3.073062 ACAGAGCATACTTGAGGTTTGGT 59.927 43.478 0.00 0.00 39.53 3.67
5587 6645 3.679389 ACAGAGCATACTTGAGGTTTGG 58.321 45.455 0.00 0.00 0.00 3.28
5588 6646 4.573900 AGACAGAGCATACTTGAGGTTTG 58.426 43.478 0.00 0.00 0.00 2.93
5589 6647 4.899352 AGACAGAGCATACTTGAGGTTT 57.101 40.909 0.00 0.00 0.00 3.27
5590 6648 4.899352 AAGACAGAGCATACTTGAGGTT 57.101 40.909 0.00 0.00 0.00 3.50
5591 6649 4.564406 CCAAAGACAGAGCATACTTGAGGT 60.564 45.833 0.00 0.00 0.00 3.85
5592 6650 3.937706 CCAAAGACAGAGCATACTTGAGG 59.062 47.826 0.00 0.00 0.00 3.86
5593 6651 3.373439 GCCAAAGACAGAGCATACTTGAG 59.627 47.826 0.00 0.00 0.00 3.02
5599 6657 1.280133 AGCAGCCAAAGACAGAGCATA 59.720 47.619 0.00 0.00 0.00 3.14
5603 6661 2.110901 ATCAGCAGCCAAAGACAGAG 57.889 50.000 0.00 0.00 0.00 3.35
5604 6662 2.224597 TGAATCAGCAGCCAAAGACAGA 60.225 45.455 0.00 0.00 0.00 3.41
5645 6703 2.542411 CCGGTATGTACGTAAGACCTGC 60.542 54.545 15.85 0.00 43.62 4.85
5674 6914 2.165641 AGACGATGCGTGTATCTCCAAA 59.834 45.455 0.00 0.00 41.37 3.28
5699 6939 2.763448 ACTATGACCTTCCTGCTGAGAC 59.237 50.000 0.00 0.00 0.00 3.36
5750 6990 2.040412 GAGGGGTTCAACCACAGAAGAT 59.960 50.000 12.63 0.00 46.63 2.40
5792 7034 1.320507 TCAAATGAGCAGCTGCACAA 58.679 45.000 36.49 23.61 44.22 3.33
5898 7141 4.012374 CCAGTTTATCCACTTGATGCAGT 58.988 43.478 0.00 0.00 34.76 4.40
5900 7143 3.010027 TCCCAGTTTATCCACTTGATGCA 59.990 43.478 0.00 0.00 34.76 3.96
6045 7295 9.672086 TTACATGTAACGAAAAAGAATGGAAAG 57.328 29.630 14.35 0.00 0.00 2.62
6060 7310 1.201987 GCGCCAGGTTTACATGTAACG 60.202 52.381 17.85 16.58 0.00 3.18
6251 7504 8.015185 AGTTCAGCAATTAGGATTTGCAATAT 57.985 30.769 0.00 0.00 0.00 1.28
6306 7559 7.807977 AGTATCCAACATTGTTCATATGGTC 57.192 36.000 2.13 0.00 0.00 4.02
6347 10016 6.234920 TGCTTTAACCTTGCAAGTCTACATA 58.765 36.000 24.35 5.97 33.48 2.29
6351 10020 5.592688 AGTTTGCTTTAACCTTGCAAGTCTA 59.407 36.000 24.35 12.40 45.52 2.59
6358 10027 6.510879 ACCTATAGTTTGCTTTAACCTTGC 57.489 37.500 0.00 0.00 0.00 4.01
6433 10102 4.890088 ACATTCTGAATTGCATGCTTGTT 58.110 34.783 20.33 10.68 0.00 2.83
6434 10103 4.491676 GACATTCTGAATTGCATGCTTGT 58.508 39.130 20.33 3.01 0.00 3.16
6435 10104 3.863424 GGACATTCTGAATTGCATGCTTG 59.137 43.478 20.33 5.18 0.00 4.01
6436 10105 3.767673 AGGACATTCTGAATTGCATGCTT 59.232 39.130 20.33 5.44 0.00 3.91
6437 10106 3.362706 AGGACATTCTGAATTGCATGCT 58.637 40.909 20.33 0.00 0.00 3.79
6438 10107 3.795623 AGGACATTCTGAATTGCATGC 57.204 42.857 11.82 11.82 0.00 4.06
6439 10108 6.206498 CACATAGGACATTCTGAATTGCATG 58.794 40.000 0.00 3.59 0.00 4.06
6442 10111 4.096833 TGCACATAGGACATTCTGAATTGC 59.903 41.667 10.79 10.79 0.00 3.56
6443 10112 5.124297 TGTGCACATAGGACATTCTGAATTG 59.876 40.000 17.42 0.00 44.19 2.32
6444 10113 5.255687 TGTGCACATAGGACATTCTGAATT 58.744 37.500 17.42 0.00 44.19 2.17
6445 10114 4.847198 TGTGCACATAGGACATTCTGAAT 58.153 39.130 17.42 0.00 44.19 2.57
6446 10115 4.284829 TGTGCACATAGGACATTCTGAA 57.715 40.909 17.42 0.00 44.19 3.02
6447 10116 3.979101 TGTGCACATAGGACATTCTGA 57.021 42.857 17.42 0.00 44.19 3.27
6489 10158 2.750166 ACAAAACATTGGTGTGTCGTGA 59.250 40.909 0.00 0.00 38.92 4.35
6490 10159 3.105203 GACAAAACATTGGTGTGTCGTG 58.895 45.455 9.21 0.00 38.92 4.35
6494 10163 2.495270 TGCTGACAAAACATTGGTGTGT 59.505 40.909 0.00 0.00 38.92 3.72
6503 10172 4.782019 AAGTTCTTGTGCTGACAAAACA 57.218 36.364 12.75 0.00 41.62 2.83
6553 10222 8.914328 AATTTTATTAAATCAACGGTAACCGG 57.086 30.769 0.00 0.00 41.12 5.28
6574 10243 7.761249 GCCAGAATTCTAGCATGTTGTTAATTT 59.239 33.333 19.31 0.00 30.87 1.82
6581 10250 6.630444 AATAGCCAGAATTCTAGCATGTTG 57.370 37.500 24.71 4.60 32.96 3.33
6594 10263 5.359576 AGAACACACACAAAAATAGCCAGAA 59.640 36.000 0.00 0.00 0.00 3.02
6614 10283 1.717645 CGTGTACGTGCACCTAAGAAC 59.282 52.381 27.59 4.05 36.08 3.01
6615 10284 1.608109 TCGTGTACGTGCACCTAAGAA 59.392 47.619 27.59 6.82 40.80 2.52
6617 10286 2.054687 TTCGTGTACGTGCACCTAAG 57.945 50.000 27.59 15.50 40.80 2.18
6622 10291 3.613145 GAAGTATTCGTGTACGTGCAC 57.387 47.619 24.73 24.73 40.80 4.57
6649 10318 2.480419 CCGACTTGACCTTGTTGATGAC 59.520 50.000 0.00 0.00 0.00 3.06
6654 10323 0.868406 GAGCCGACTTGACCTTGTTG 59.132 55.000 0.00 0.00 0.00 3.33
6655 10324 0.250338 GGAGCCGACTTGACCTTGTT 60.250 55.000 0.00 0.00 0.00 2.83
6674 10343 2.016393 TTGTCGCTGCTCCCCTATCG 62.016 60.000 0.00 0.00 0.00 2.92
6729 10399 5.220228 CGAGATTCTTACACCATCGAACAAC 60.220 44.000 0.00 0.00 0.00 3.32
6731 10401 4.157105 TCGAGATTCTTACACCATCGAACA 59.843 41.667 0.00 0.00 35.06 3.18
6736 10406 8.594881 AATTACATCGAGATTCTTACACCATC 57.405 34.615 0.00 0.00 0.00 3.51
6774 10752 7.141363 AGTTCATCAAAAGTACAAAGCATCAC 58.859 34.615 0.00 0.00 0.00 3.06
6775 10753 7.275888 AGTTCATCAAAAGTACAAAGCATCA 57.724 32.000 0.00 0.00 0.00 3.07
6776 10754 8.579682 AAAGTTCATCAAAAGTACAAAGCATC 57.420 30.769 0.00 0.00 0.00 3.91
6777 10755 8.947055 AAAAGTTCATCAAAAGTACAAAGCAT 57.053 26.923 0.00 0.00 0.00 3.79
6804 10783 7.780008 TTCGCAAAAGGATTCGAATCTATTA 57.220 32.000 31.32 12.91 36.24 0.98
6814 10793 3.324993 TGGCATTTTCGCAAAAGGATTC 58.675 40.909 9.23 1.52 34.30 2.52
6839 10818 2.900273 GCCGGTCTGCCATGTCTA 59.100 61.111 1.90 0.00 34.09 2.59
6850 10829 3.656045 CCAACACCAACGCCGGTC 61.656 66.667 1.90 0.00 37.07 4.79
6883 10862 4.558226 TGACAAGTCATGGCTAGTGAAT 57.442 40.909 0.00 0.00 38.19 2.57
6929 10908 5.630680 TGTACGAAAACTAGAAACATCCGAC 59.369 40.000 0.00 0.00 0.00 4.79
6948 10927 9.669887 ACTATACCTAGAGAATCCTATTGTACG 57.330 37.037 0.00 0.00 33.66 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.