Multiple sequence alignment - TraesCS4D01G268700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G268700 chr4D 100.000 1494 0 0 897 2390 439773291 439771798 0.000000e+00 2760.0
1 TraesCS4D01G268700 chr4D 100.000 523 0 0 1 523 439774187 439773665 0.000000e+00 966.0
2 TraesCS4D01G268700 chr1D 91.020 902 67 6 953 1844 416854710 416855607 0.000000e+00 1205.0
3 TraesCS4D01G268700 chr1D 88.841 233 26 0 291 523 81369442 81369674 1.080000e-73 287.0
4 TraesCS4D01G268700 chr1D 86.111 252 16 7 1616 1850 353551965 353551716 1.100000e-63 254.0
5 TraesCS4D01G268700 chr1D 80.952 105 16 3 2135 2238 14859604 14859503 1.970000e-11 80.5
6 TraesCS4D01G268700 chr3B 89.419 964 86 8 897 1846 733608175 733609136 0.000000e+00 1201.0
7 TraesCS4D01G268700 chr3B 89.017 956 90 7 901 1844 237102244 237103196 0.000000e+00 1170.0
8 TraesCS4D01G268700 chr3B 88.636 176 12 4 1676 1844 706726854 706727028 8.660000e-50 207.0
9 TraesCS4D01G268700 chr4B 90.075 937 76 10 926 1850 173178093 173179024 0.000000e+00 1199.0
10 TraesCS4D01G268700 chr4B 83.832 167 13 9 2229 2390 544447405 544447248 1.910000e-31 147.0
11 TraesCS4D01G268700 chr4B 82.292 96 15 2 2134 2228 529917368 529917274 5.480000e-12 82.4
12 TraesCS4D01G268700 chr4A 89.018 947 74 16 908 1843 575040169 575039242 0.000000e+00 1146.0
13 TraesCS4D01G268700 chr4A 91.749 509 27 7 1891 2390 29070587 29070085 0.000000e+00 693.0
14 TraesCS4D01G268700 chr4A 91.064 235 18 3 292 523 562577717 562577951 4.960000e-82 315.0
15 TraesCS4D01G268700 chr6B 88.370 963 96 7 897 1846 45842279 45843238 0.000000e+00 1144.0
16 TraesCS4D01G268700 chr6B 87.097 248 31 1 1 248 53729897 53729651 1.810000e-71 279.0
17 TraesCS4D01G268700 chr6B 87.097 248 31 1 1 248 53741984 53741738 1.810000e-71 279.0
18 TraesCS4D01G268700 chr6B 87.967 241 17 4 1614 1844 414321534 414321296 8.420000e-70 274.0
19 TraesCS4D01G268700 chr6B 86.585 246 16 8 1614 1844 277156758 277156515 3.050000e-64 255.0
20 TraesCS4D01G268700 chr7B 88.514 949 89 16 905 1846 453934870 453935805 0.000000e+00 1131.0
21 TraesCS4D01G268700 chr7B 85.437 103 12 3 2127 2228 156623469 156623569 1.170000e-18 104.0
22 TraesCS4D01G268700 chr7D 90.675 815 74 2 897 1711 569043311 569044123 0.000000e+00 1083.0
23 TraesCS4D01G268700 chr7D 85.774 239 14 10 1625 1846 566313627 566313862 3.970000e-58 235.0
24 TraesCS4D01G268700 chr6D 88.991 872 82 7 984 1844 10706044 10706912 0.000000e+00 1066.0
25 TraesCS4D01G268700 chr6D 91.667 216 17 1 292 507 143658332 143658546 4.990000e-77 298.0
26 TraesCS4D01G268700 chr6D 87.967 241 17 5 1614 1844 9145459 9145221 8.420000e-70 274.0
27 TraesCS4D01G268700 chr1A 92.241 232 17 1 292 522 534842541 534842772 6.370000e-86 327.0
28 TraesCS4D01G268700 chr7A 91.379 232 19 1 292 522 596711540 596711309 1.380000e-82 316.0
29 TraesCS4D01G268700 chr3A 90.558 233 19 3 292 522 739752981 739753212 2.980000e-79 305.0
30 TraesCS4D01G268700 chr2B 89.640 222 23 0 292 513 783641286 783641065 1.400000e-72 283.0
31 TraesCS4D01G268700 chr2B 85.294 238 17 7 1626 1846 783706912 783706676 1.850000e-56 230.0
32 TraesCS4D01G268700 chr2B 83.000 100 14 3 2127 2225 198641343 198641440 1.180000e-13 87.9
33 TraesCS4D01G268700 chr2D 89.035 228 23 1 294 521 579217315 579217090 5.030000e-72 281.0
34 TraesCS4D01G268700 chr2D 87.983 233 23 2 291 523 286671963 286672190 1.090000e-68 270.0
35 TraesCS4D01G268700 chr2D 100.000 28 0 0 1987 2014 4734610 4734637 4.000000e-03 52.8
36 TraesCS4D01G268700 chr2D 100.000 28 0 0 1987 2014 4777113 4777140 4.000000e-03 52.8
37 TraesCS4D01G268700 chr5D 87.866 239 28 1 10 248 489889654 489889417 1.810000e-71 279.0
38 TraesCS4D01G268700 chr5D 95.349 43 2 0 1843 1885 489889356 489889314 4.260000e-08 69.4
39 TraesCS4D01G268700 chr2A 88.068 176 13 4 1676 1844 657058694 657058868 4.030000e-48 202.0
40 TraesCS4D01G268700 chr3D 86.316 95 8 3 2135 2228 443263479 443263389 5.440000e-17 99.0
41 TraesCS4D01G268700 chr3D 80.583 103 15 5 2128 2228 179925016 179924917 9.160000e-10 75.0
42 TraesCS4D01G268700 chrUn 80.952 105 16 3 2135 2238 241614643 241614542 1.970000e-11 80.5
43 TraesCS4D01G268700 chrUn 82.105 95 15 2 2135 2228 293088946 293089039 1.970000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G268700 chr4D 439771798 439774187 2389 True 1863 2760 100.000 1 2390 2 chr4D.!!$R1 2389
1 TraesCS4D01G268700 chr1D 416854710 416855607 897 False 1205 1205 91.020 953 1844 1 chr1D.!!$F2 891
2 TraesCS4D01G268700 chr3B 733608175 733609136 961 False 1201 1201 89.419 897 1846 1 chr3B.!!$F3 949
3 TraesCS4D01G268700 chr3B 237102244 237103196 952 False 1170 1170 89.017 901 1844 1 chr3B.!!$F1 943
4 TraesCS4D01G268700 chr4B 173178093 173179024 931 False 1199 1199 90.075 926 1850 1 chr4B.!!$F1 924
5 TraesCS4D01G268700 chr4A 575039242 575040169 927 True 1146 1146 89.018 908 1843 1 chr4A.!!$R2 935
6 TraesCS4D01G268700 chr4A 29070085 29070587 502 True 693 693 91.749 1891 2390 1 chr4A.!!$R1 499
7 TraesCS4D01G268700 chr6B 45842279 45843238 959 False 1144 1144 88.370 897 1846 1 chr6B.!!$F1 949
8 TraesCS4D01G268700 chr7B 453934870 453935805 935 False 1131 1131 88.514 905 1846 1 chr7B.!!$F2 941
9 TraesCS4D01G268700 chr7D 569043311 569044123 812 False 1083 1083 90.675 897 1711 1 chr7D.!!$F2 814
10 TraesCS4D01G268700 chr6D 10706044 10706912 868 False 1066 1066 88.991 984 1844 1 chr6D.!!$F1 860

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 299 0.105964 ACACGTTGTGGCTTAGAGCA 59.894 50.0 2.04 0.0 44.75 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1984 2040 0.898789 AGAGACAGGGTGTACGTGGG 60.899 60.0 0.0 0.0 39.23 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.549064 ATTAGTGGCTATCGCATGCA 57.451 45.000 19.57 5.34 38.10 3.96
20 21 1.869774 TTAGTGGCTATCGCATGCAG 58.130 50.000 19.57 8.91 38.10 4.41
21 22 1.039856 TAGTGGCTATCGCATGCAGA 58.960 50.000 19.57 15.95 38.10 4.26
22 23 0.249784 AGTGGCTATCGCATGCAGAG 60.250 55.000 19.57 12.01 38.10 3.35
23 24 0.249615 GTGGCTATCGCATGCAGAGA 60.250 55.000 19.57 12.04 38.10 3.10
24 25 0.465287 TGGCTATCGCATGCAGAGAA 59.535 50.000 19.57 7.65 38.10 2.87
25 26 1.146637 GGCTATCGCATGCAGAGAAG 58.853 55.000 19.57 16.30 38.10 2.85
26 27 0.512085 GCTATCGCATGCAGAGAAGC 59.488 55.000 19.57 20.94 35.78 3.86
38 39 5.808042 TGCAGAGAAGCAATATCTTTGAC 57.192 39.130 0.00 0.00 42.46 3.18
39 40 4.330894 TGCAGAGAAGCAATATCTTTGACG 59.669 41.667 0.00 0.00 42.46 4.35
40 41 4.260538 GCAGAGAAGCAATATCTTTGACGG 60.261 45.833 0.00 0.00 32.34 4.79
41 42 5.111989 CAGAGAAGCAATATCTTTGACGGA 58.888 41.667 0.00 0.00 32.34 4.69
42 43 5.233902 CAGAGAAGCAATATCTTTGACGGAG 59.766 44.000 0.00 0.00 32.34 4.63
43 44 4.446371 AGAAGCAATATCTTTGACGGAGG 58.554 43.478 0.00 0.00 0.00 4.30
44 45 4.162320 AGAAGCAATATCTTTGACGGAGGA 59.838 41.667 0.00 0.00 0.00 3.71
45 46 4.696479 AGCAATATCTTTGACGGAGGAT 57.304 40.909 0.00 0.00 0.00 3.24
46 47 4.636249 AGCAATATCTTTGACGGAGGATC 58.364 43.478 0.00 0.00 0.00 3.36
47 48 4.346418 AGCAATATCTTTGACGGAGGATCT 59.654 41.667 0.00 0.00 33.73 2.75
48 49 4.688413 GCAATATCTTTGACGGAGGATCTC 59.312 45.833 0.00 0.00 33.73 2.75
49 50 5.233988 CAATATCTTTGACGGAGGATCTCC 58.766 45.833 3.96 3.96 46.44 3.71
65 66 8.632906 GAGGATCTCCATATTCAACAATTCAT 57.367 34.615 0.00 0.00 38.89 2.57
66 67 9.075678 GAGGATCTCCATATTCAACAATTCATT 57.924 33.333 0.00 0.00 38.89 2.57
67 68 8.857098 AGGATCTCCATATTCAACAATTCATTG 58.143 33.333 0.00 0.00 40.08 2.82
68 69 8.636213 GGATCTCCATATTCAACAATTCATTGT 58.364 33.333 0.00 0.00 43.40 2.71
81 82 5.897133 CAATTCATTGTTGCTTCAAACTCG 58.103 37.500 0.00 0.00 33.22 4.18
82 83 4.891627 TTCATTGTTGCTTCAAACTCGA 57.108 36.364 0.00 0.00 0.00 4.04
83 84 4.891627 TCATTGTTGCTTCAAACTCGAA 57.108 36.364 0.00 0.00 0.00 3.71
84 85 5.242069 TCATTGTTGCTTCAAACTCGAAA 57.758 34.783 0.00 0.00 0.00 3.46
85 86 5.034152 TCATTGTTGCTTCAAACTCGAAAC 58.966 37.500 0.00 0.00 0.00 2.78
86 87 4.427096 TTGTTGCTTCAAACTCGAAACA 57.573 36.364 0.00 0.00 0.00 2.83
87 88 4.427096 TGTTGCTTCAAACTCGAAACAA 57.573 36.364 0.00 0.00 30.58 2.83
88 89 4.799678 TGTTGCTTCAAACTCGAAACAAA 58.200 34.783 0.00 0.00 33.92 2.83
89 90 5.223382 TGTTGCTTCAAACTCGAAACAAAA 58.777 33.333 0.00 0.00 33.92 2.44
90 91 5.866633 TGTTGCTTCAAACTCGAAACAAAAT 59.133 32.000 0.00 0.00 33.92 1.82
91 92 5.947503 TGCTTCAAACTCGAAACAAAATG 57.052 34.783 0.00 0.00 0.00 2.32
92 93 4.803088 TGCTTCAAACTCGAAACAAAATGG 59.197 37.500 0.00 0.00 0.00 3.16
93 94 4.803613 GCTTCAAACTCGAAACAAAATGGT 59.196 37.500 0.00 0.00 0.00 3.55
94 95 5.276348 GCTTCAAACTCGAAACAAAATGGTG 60.276 40.000 0.00 0.00 0.00 4.17
95 96 4.677584 TCAAACTCGAAACAAAATGGTGG 58.322 39.130 0.00 0.00 0.00 4.61
96 97 4.399618 TCAAACTCGAAACAAAATGGTGGA 59.600 37.500 0.00 0.00 0.00 4.02
97 98 4.993029 AACTCGAAACAAAATGGTGGAA 57.007 36.364 0.00 0.00 0.00 3.53
98 99 4.568152 ACTCGAAACAAAATGGTGGAAG 57.432 40.909 0.00 0.00 0.00 3.46
99 100 4.204012 ACTCGAAACAAAATGGTGGAAGA 58.796 39.130 0.00 0.00 0.00 2.87
100 101 4.827284 ACTCGAAACAAAATGGTGGAAGAT 59.173 37.500 0.00 0.00 0.00 2.40
101 102 6.001460 ACTCGAAACAAAATGGTGGAAGATA 58.999 36.000 0.00 0.00 0.00 1.98
102 103 6.659242 ACTCGAAACAAAATGGTGGAAGATAT 59.341 34.615 0.00 0.00 0.00 1.63
103 104 7.083875 TCGAAACAAAATGGTGGAAGATATC 57.916 36.000 0.00 0.00 0.00 1.63
104 105 6.657117 TCGAAACAAAATGGTGGAAGATATCA 59.343 34.615 5.32 0.00 0.00 2.15
105 106 7.175816 TCGAAACAAAATGGTGGAAGATATCAA 59.824 33.333 5.32 0.00 0.00 2.57
106 107 7.485913 CGAAACAAAATGGTGGAAGATATCAAG 59.514 37.037 5.32 0.00 0.00 3.02
107 108 8.421249 AAACAAAATGGTGGAAGATATCAAGA 57.579 30.769 5.32 0.00 0.00 3.02
108 109 7.636150 ACAAAATGGTGGAAGATATCAAGAG 57.364 36.000 5.32 0.00 0.00 2.85
109 110 6.096001 ACAAAATGGTGGAAGATATCAAGAGC 59.904 38.462 5.32 0.00 0.00 4.09
110 111 5.643421 AATGGTGGAAGATATCAAGAGCT 57.357 39.130 5.32 0.00 0.00 4.09
111 112 5.643421 ATGGTGGAAGATATCAAGAGCTT 57.357 39.130 5.32 0.00 0.00 3.74
112 113 5.441718 TGGTGGAAGATATCAAGAGCTTT 57.558 39.130 5.32 0.00 0.00 3.51
113 114 6.560003 TGGTGGAAGATATCAAGAGCTTTA 57.440 37.500 5.32 0.00 0.00 1.85
114 115 6.586344 TGGTGGAAGATATCAAGAGCTTTAG 58.414 40.000 5.32 0.00 0.00 1.85
115 116 5.994668 GGTGGAAGATATCAAGAGCTTTAGG 59.005 44.000 5.32 0.00 0.00 2.69
116 117 5.468409 GTGGAAGATATCAAGAGCTTTAGGC 59.532 44.000 5.32 0.00 42.19 3.93
125 126 4.695560 GCTTTAGGCGTGTCACCT 57.304 55.556 0.00 0.00 41.57 4.00
126 127 2.162716 GCTTTAGGCGTGTCACCTG 58.837 57.895 0.00 0.00 38.26 4.00
127 128 1.912371 GCTTTAGGCGTGTCACCTGC 61.912 60.000 0.00 0.00 38.26 4.85
128 129 1.626654 CTTTAGGCGTGTCACCTGCG 61.627 60.000 0.00 0.00 38.26 5.18
129 130 3.583276 TTAGGCGTGTCACCTGCGG 62.583 63.158 0.00 0.00 38.26 5.69
134 135 3.936203 GTGTCACCTGCGGGGACA 61.936 66.667 23.13 23.13 39.07 4.02
135 136 2.927856 TGTCACCTGCGGGGACAT 60.928 61.111 23.13 0.00 37.65 3.06
136 137 2.351276 GTCACCTGCGGGGACATT 59.649 61.111 18.00 0.00 38.76 2.71
137 138 1.195442 TGTCACCTGCGGGGACATTA 61.195 55.000 23.13 6.51 37.65 1.90
138 139 0.180406 GTCACCTGCGGGGACATTAT 59.820 55.000 18.00 0.00 38.76 1.28
139 140 0.916086 TCACCTGCGGGGACATTATT 59.084 50.000 18.00 0.00 38.76 1.40
140 141 2.120312 TCACCTGCGGGGACATTATTA 58.880 47.619 18.00 0.00 38.76 0.98
141 142 2.104111 TCACCTGCGGGGACATTATTAG 59.896 50.000 18.00 0.00 38.76 1.73
142 143 1.202770 ACCTGCGGGGACATTATTAGC 60.203 52.381 18.00 0.00 38.76 3.09
143 144 1.148310 CTGCGGGGACATTATTAGCG 58.852 55.000 0.00 0.00 0.00 4.26
144 145 0.753867 TGCGGGGACATTATTAGCGA 59.246 50.000 0.00 0.00 0.00 4.93
145 146 1.270094 TGCGGGGACATTATTAGCGAG 60.270 52.381 0.00 0.00 0.00 5.03
146 147 1.000506 GCGGGGACATTATTAGCGAGA 59.999 52.381 0.00 0.00 0.00 4.04
147 148 2.353803 GCGGGGACATTATTAGCGAGAT 60.354 50.000 0.00 0.00 0.00 2.75
148 149 3.864921 GCGGGGACATTATTAGCGAGATT 60.865 47.826 0.00 0.00 0.00 2.40
149 150 4.619863 GCGGGGACATTATTAGCGAGATTA 60.620 45.833 0.00 0.00 0.00 1.75
150 151 5.475719 CGGGGACATTATTAGCGAGATTAA 58.524 41.667 0.00 0.00 0.00 1.40
151 152 6.106673 CGGGGACATTATTAGCGAGATTAAT 58.893 40.000 0.00 0.00 0.00 1.40
152 153 6.036083 CGGGGACATTATTAGCGAGATTAATG 59.964 42.308 0.00 0.00 0.00 1.90
153 154 6.879458 GGGGACATTATTAGCGAGATTAATGT 59.121 38.462 12.98 12.98 39.79 2.71
154 155 7.390718 GGGGACATTATTAGCGAGATTAATGTT 59.609 37.037 13.74 0.00 37.99 2.71
155 156 8.784043 GGGACATTATTAGCGAGATTAATGTTT 58.216 33.333 13.74 0.26 37.99 2.83
156 157 9.599322 GGACATTATTAGCGAGATTAATGTTTG 57.401 33.333 13.74 0.00 37.99 2.93
159 160 9.322776 CATTATTAGCGAGATTAATGTTTGAGC 57.677 33.333 0.00 0.00 0.00 4.26
160 161 8.662781 TTATTAGCGAGATTAATGTTTGAGCT 57.337 30.769 0.00 2.28 36.36 4.09
161 162 6.985188 TTAGCGAGATTAATGTTTGAGCTT 57.015 33.333 0.00 0.00 34.12 3.74
162 163 5.886960 AGCGAGATTAATGTTTGAGCTTT 57.113 34.783 0.00 0.00 0.00 3.51
163 164 5.634896 AGCGAGATTAATGTTTGAGCTTTG 58.365 37.500 0.00 0.00 0.00 2.77
164 165 5.182001 AGCGAGATTAATGTTTGAGCTTTGT 59.818 36.000 0.00 0.00 0.00 2.83
165 166 5.858581 GCGAGATTAATGTTTGAGCTTTGTT 59.141 36.000 0.00 0.00 0.00 2.83
166 167 7.021196 GCGAGATTAATGTTTGAGCTTTGTTA 58.979 34.615 0.00 0.00 0.00 2.41
167 168 7.698130 GCGAGATTAATGTTTGAGCTTTGTTAT 59.302 33.333 0.00 0.00 0.00 1.89
168 169 9.559958 CGAGATTAATGTTTGAGCTTTGTTATT 57.440 29.630 0.00 0.00 0.00 1.40
172 173 8.514136 TTAATGTTTGAGCTTTGTTATTTCGG 57.486 30.769 0.00 0.00 0.00 4.30
173 174 5.508200 TGTTTGAGCTTTGTTATTTCGGT 57.492 34.783 0.00 0.00 0.00 4.69
174 175 5.277825 TGTTTGAGCTTTGTTATTTCGGTG 58.722 37.500 0.00 0.00 0.00 4.94
175 176 5.163602 TGTTTGAGCTTTGTTATTTCGGTGT 60.164 36.000 0.00 0.00 0.00 4.16
176 177 6.038382 TGTTTGAGCTTTGTTATTTCGGTGTA 59.962 34.615 0.00 0.00 0.00 2.90
177 178 6.621316 TTGAGCTTTGTTATTTCGGTGTAA 57.379 33.333 0.00 0.00 0.00 2.41
178 179 6.811253 TGAGCTTTGTTATTTCGGTGTAAT 57.189 33.333 0.00 0.00 0.00 1.89
179 180 7.209471 TGAGCTTTGTTATTTCGGTGTAATT 57.791 32.000 0.00 0.00 0.00 1.40
180 181 7.653647 TGAGCTTTGTTATTTCGGTGTAATTT 58.346 30.769 0.00 0.00 0.00 1.82
181 182 7.806014 TGAGCTTTGTTATTTCGGTGTAATTTC 59.194 33.333 0.00 0.00 0.00 2.17
182 183 7.653647 AGCTTTGTTATTTCGGTGTAATTTCA 58.346 30.769 0.00 0.00 0.00 2.69
183 184 7.593644 AGCTTTGTTATTTCGGTGTAATTTCAC 59.406 33.333 6.66 6.66 37.57 3.18
184 185 7.593644 GCTTTGTTATTTCGGTGTAATTTCACT 59.406 33.333 13.97 0.00 38.28 3.41
185 186 9.458374 CTTTGTTATTTCGGTGTAATTTCACTT 57.542 29.630 13.97 0.00 38.28 3.16
186 187 9.804758 TTTGTTATTTCGGTGTAATTTCACTTT 57.195 25.926 13.97 0.07 38.28 2.66
187 188 9.804758 TTGTTATTTCGGTGTAATTTCACTTTT 57.195 25.926 13.97 0.36 38.28 2.27
188 189 9.239002 TGTTATTTCGGTGTAATTTCACTTTTG 57.761 29.630 13.97 3.85 38.28 2.44
189 190 9.453325 GTTATTTCGGTGTAATTTCACTTTTGA 57.547 29.630 13.97 5.78 38.28 2.69
192 193 7.922505 TTCGGTGTAATTTCACTTTTGAATG 57.077 32.000 13.97 0.00 41.50 2.67
193 194 7.033530 TCGGTGTAATTTCACTTTTGAATGT 57.966 32.000 13.97 0.00 41.50 2.71
194 195 7.136119 TCGGTGTAATTTCACTTTTGAATGTC 58.864 34.615 13.97 0.00 41.50 3.06
195 196 6.915300 CGGTGTAATTTCACTTTTGAATGTCA 59.085 34.615 13.97 0.00 41.50 3.58
196 197 7.594758 CGGTGTAATTTCACTTTTGAATGTCAT 59.405 33.333 13.97 0.00 41.50 3.06
197 198 8.702438 GGTGTAATTTCACTTTTGAATGTCATG 58.298 33.333 13.97 0.00 41.50 3.07
198 199 8.216453 GTGTAATTTCACTTTTGAATGTCATGC 58.784 33.333 7.87 0.00 41.50 4.06
199 200 6.790285 AATTTCACTTTTGAATGTCATGCC 57.210 33.333 0.00 0.00 41.50 4.40
200 201 4.933505 TTCACTTTTGAATGTCATGCCA 57.066 36.364 0.00 0.00 36.79 4.92
201 202 5.471556 TTCACTTTTGAATGTCATGCCAT 57.528 34.783 0.00 0.00 36.79 4.40
202 203 5.063180 TCACTTTTGAATGTCATGCCATC 57.937 39.130 0.00 0.00 0.00 3.51
203 204 4.523558 TCACTTTTGAATGTCATGCCATCA 59.476 37.500 0.00 0.00 0.00 3.07
204 205 5.010820 TCACTTTTGAATGTCATGCCATCAA 59.989 36.000 0.00 0.00 0.00 2.57
205 206 5.872617 CACTTTTGAATGTCATGCCATCAAT 59.127 36.000 0.00 0.00 0.00 2.57
206 207 6.370442 CACTTTTGAATGTCATGCCATCAATT 59.630 34.615 0.00 0.00 0.00 2.32
207 208 6.938030 ACTTTTGAATGTCATGCCATCAATTT 59.062 30.769 0.00 0.00 0.00 1.82
208 209 7.446013 ACTTTTGAATGTCATGCCATCAATTTT 59.554 29.630 0.00 0.00 0.00 1.82
209 210 6.729391 TTGAATGTCATGCCATCAATTTTG 57.271 33.333 0.00 0.00 0.00 2.44
210 211 6.038997 TGAATGTCATGCCATCAATTTTGA 57.961 33.333 0.00 0.00 42.14 2.69
211 212 6.103330 TGAATGTCATGCCATCAATTTTGAG 58.897 36.000 0.00 0.00 41.08 3.02
212 213 4.459390 TGTCATGCCATCAATTTTGAGG 57.541 40.909 0.00 0.00 41.08 3.86
213 214 3.192466 GTCATGCCATCAATTTTGAGGC 58.808 45.455 18.74 18.74 44.50 4.70
215 216 2.747396 TGCCATCAATTTTGAGGCAC 57.253 45.000 21.86 9.44 46.54 5.01
216 217 1.067706 TGCCATCAATTTTGAGGCACG 60.068 47.619 21.86 4.65 46.54 5.34
217 218 1.067635 GCCATCAATTTTGAGGCACGT 60.068 47.619 19.81 0.00 44.09 4.49
218 219 2.598589 CCATCAATTTTGAGGCACGTG 58.401 47.619 12.28 12.28 41.08 4.49
219 220 2.228582 CCATCAATTTTGAGGCACGTGA 59.771 45.455 22.23 0.00 41.08 4.35
220 221 3.119388 CCATCAATTTTGAGGCACGTGAT 60.119 43.478 22.23 6.57 41.08 3.06
221 222 4.487948 CATCAATTTTGAGGCACGTGATT 58.512 39.130 22.23 5.73 41.08 2.57
222 223 4.582701 TCAATTTTGAGGCACGTGATTT 57.417 36.364 22.23 2.73 32.50 2.17
223 224 5.697473 TCAATTTTGAGGCACGTGATTTA 57.303 34.783 22.23 0.00 32.50 1.40
224 225 5.698832 TCAATTTTGAGGCACGTGATTTAG 58.301 37.500 22.23 0.00 32.50 1.85
225 226 3.552604 TTTTGAGGCACGTGATTTAGC 57.447 42.857 22.23 1.41 0.00 3.09
229 230 3.996825 GGCACGTGATTTAGCCAAG 57.003 52.632 22.23 0.00 46.26 3.61
230 231 1.165270 GGCACGTGATTTAGCCAAGT 58.835 50.000 22.23 0.00 46.26 3.16
231 232 1.539827 GGCACGTGATTTAGCCAAGTT 59.460 47.619 22.23 0.00 46.26 2.66
232 233 2.030274 GGCACGTGATTTAGCCAAGTTT 60.030 45.455 22.23 0.00 46.26 2.66
233 234 2.979813 GCACGTGATTTAGCCAAGTTTG 59.020 45.455 22.23 0.00 0.00 2.93
234 235 2.979813 CACGTGATTTAGCCAAGTTTGC 59.020 45.455 10.90 0.00 0.00 3.68
235 236 2.884639 ACGTGATTTAGCCAAGTTTGCT 59.115 40.909 6.69 6.69 42.81 3.91
236 237 3.317993 ACGTGATTTAGCCAAGTTTGCTT 59.682 39.130 6.78 0.00 40.23 3.91
237 238 4.202111 ACGTGATTTAGCCAAGTTTGCTTT 60.202 37.500 6.78 0.00 40.23 3.51
238 239 4.148696 CGTGATTTAGCCAAGTTTGCTTTG 59.851 41.667 6.78 0.00 40.23 2.77
239 240 5.049828 GTGATTTAGCCAAGTTTGCTTTGT 58.950 37.500 6.78 0.00 40.23 2.83
240 241 5.175673 GTGATTTAGCCAAGTTTGCTTTGTC 59.824 40.000 6.78 3.99 40.23 3.18
241 242 3.347958 TTAGCCAAGTTTGCTTTGTCG 57.652 42.857 6.78 0.00 40.23 4.35
242 243 0.249031 AGCCAAGTTTGCTTTGTCGC 60.249 50.000 0.00 0.00 34.87 5.19
243 244 0.249031 GCCAAGTTTGCTTTGTCGCT 60.249 50.000 0.00 0.00 31.49 4.93
244 245 1.001815 GCCAAGTTTGCTTTGTCGCTA 60.002 47.619 0.00 0.00 31.49 4.26
245 246 2.918131 GCCAAGTTTGCTTTGTCGCTAG 60.918 50.000 0.00 0.00 31.49 3.42
246 247 2.350772 CCAAGTTTGCTTTGTCGCTAGG 60.351 50.000 0.00 0.00 31.49 3.02
247 248 2.256117 AGTTTGCTTTGTCGCTAGGT 57.744 45.000 0.00 0.00 0.00 3.08
248 249 2.572290 AGTTTGCTTTGTCGCTAGGTT 58.428 42.857 0.00 0.00 0.00 3.50
249 250 2.949644 AGTTTGCTTTGTCGCTAGGTTT 59.050 40.909 0.00 0.00 0.00 3.27
250 251 3.042887 GTTTGCTTTGTCGCTAGGTTTG 58.957 45.455 0.00 0.00 0.00 2.93
251 252 1.234821 TGCTTTGTCGCTAGGTTTGG 58.765 50.000 0.00 0.00 0.00 3.28
252 253 1.235724 GCTTTGTCGCTAGGTTTGGT 58.764 50.000 0.00 0.00 0.00 3.67
253 254 1.069227 GCTTTGTCGCTAGGTTTGGTG 60.069 52.381 0.00 0.00 0.00 4.17
254 255 2.489971 CTTTGTCGCTAGGTTTGGTGA 58.510 47.619 0.00 0.00 0.00 4.02
255 256 1.873698 TTGTCGCTAGGTTTGGTGAC 58.126 50.000 0.00 0.00 43.30 3.67
256 257 1.045407 TGTCGCTAGGTTTGGTGACT 58.955 50.000 0.00 0.00 43.37 3.41
257 258 1.000506 TGTCGCTAGGTTTGGTGACTC 59.999 52.381 0.00 0.00 43.37 3.36
258 259 0.606604 TCGCTAGGTTTGGTGACTCC 59.393 55.000 0.00 0.00 0.00 3.85
259 260 0.391263 CGCTAGGTTTGGTGACTCCC 60.391 60.000 0.00 0.00 34.77 4.30
260 261 0.690762 GCTAGGTTTGGTGACTCCCA 59.309 55.000 0.00 0.00 34.77 4.37
261 262 1.610886 GCTAGGTTTGGTGACTCCCAC 60.611 57.143 0.00 0.00 44.95 4.61
271 272 3.487120 GTGACTCCCACAACCTAAACT 57.513 47.619 0.00 0.00 45.03 2.66
272 273 3.139077 GTGACTCCCACAACCTAAACTG 58.861 50.000 0.00 0.00 45.03 3.16
273 274 2.775384 TGACTCCCACAACCTAAACTGT 59.225 45.455 0.00 0.00 0.00 3.55
274 275 3.968649 TGACTCCCACAACCTAAACTGTA 59.031 43.478 0.00 0.00 0.00 2.74
275 276 4.595781 TGACTCCCACAACCTAAACTGTAT 59.404 41.667 0.00 0.00 0.00 2.29
276 277 5.161943 ACTCCCACAACCTAAACTGTATC 57.838 43.478 0.00 0.00 0.00 2.24
277 278 4.019591 ACTCCCACAACCTAAACTGTATCC 60.020 45.833 0.00 0.00 0.00 2.59
278 279 3.264964 TCCCACAACCTAAACTGTATCCC 59.735 47.826 0.00 0.00 0.00 3.85
279 280 3.009695 CCCACAACCTAAACTGTATCCCA 59.990 47.826 0.00 0.00 0.00 4.37
280 281 4.007659 CCACAACCTAAACTGTATCCCAC 58.992 47.826 0.00 0.00 0.00 4.61
281 282 4.505918 CCACAACCTAAACTGTATCCCACA 60.506 45.833 0.00 0.00 35.30 4.17
282 283 4.454504 CACAACCTAAACTGTATCCCACAC 59.545 45.833 0.00 0.00 32.33 3.82
283 284 3.604875 ACCTAAACTGTATCCCACACG 57.395 47.619 0.00 0.00 32.33 4.49
284 285 2.901839 ACCTAAACTGTATCCCACACGT 59.098 45.455 0.00 0.00 32.33 4.49
285 286 3.325716 ACCTAAACTGTATCCCACACGTT 59.674 43.478 0.00 0.00 33.00 3.99
286 287 3.682858 CCTAAACTGTATCCCACACGTTG 59.317 47.826 0.00 0.00 32.42 4.10
287 288 2.922740 AACTGTATCCCACACGTTGT 57.077 45.000 0.00 0.00 31.51 3.32
297 298 0.512952 CACACGTTGTGGCTTAGAGC 59.487 55.000 9.43 0.00 44.27 4.09
298 299 0.105964 ACACGTTGTGGCTTAGAGCA 59.894 50.000 2.04 0.00 44.75 4.26
299 300 1.270839 ACACGTTGTGGCTTAGAGCAT 60.271 47.619 2.04 0.00 44.75 3.79
300 301 1.394917 CACGTTGTGGCTTAGAGCATC 59.605 52.381 2.04 0.00 44.75 3.91
301 302 5.431178 ACACGTTGTGGCTTAGAGCATCT 62.431 47.826 2.04 0.00 44.75 2.90
315 316 3.988819 GAGCATCTCCAATAGACAGTCC 58.011 50.000 0.00 0.00 36.93 3.85
316 317 3.378512 AGCATCTCCAATAGACAGTCCA 58.621 45.455 0.00 0.00 36.93 4.02
317 318 3.972638 AGCATCTCCAATAGACAGTCCAT 59.027 43.478 0.00 0.00 36.93 3.41
318 319 5.150715 AGCATCTCCAATAGACAGTCCATA 58.849 41.667 0.00 0.00 36.93 2.74
319 320 5.784390 AGCATCTCCAATAGACAGTCCATAT 59.216 40.000 0.00 0.00 36.93 1.78
320 321 5.873712 GCATCTCCAATAGACAGTCCATATG 59.126 44.000 0.00 0.00 36.93 1.78
321 322 6.519721 GCATCTCCAATAGACAGTCCATATGT 60.520 42.308 1.24 0.00 36.93 2.29
322 323 7.310052 GCATCTCCAATAGACAGTCCATATGTA 60.310 40.741 1.24 0.00 36.93 2.29
323 324 8.588472 CATCTCCAATAGACAGTCCATATGTAA 58.412 37.037 1.24 0.00 36.93 2.41
324 325 8.547481 TCTCCAATAGACAGTCCATATGTAAA 57.453 34.615 1.24 0.00 0.00 2.01
325 326 8.988060 TCTCCAATAGACAGTCCATATGTAAAA 58.012 33.333 1.24 0.00 0.00 1.52
326 327 9.613428 CTCCAATAGACAGTCCATATGTAAAAA 57.387 33.333 1.24 0.00 0.00 1.94
333 334 9.747898 AGACAGTCCATATGTAAAAATAACCAA 57.252 29.630 1.24 0.00 0.00 3.67
334 335 9.783256 GACAGTCCATATGTAAAAATAACCAAC 57.217 33.333 1.24 0.00 0.00 3.77
335 336 9.528489 ACAGTCCATATGTAAAAATAACCAACT 57.472 29.630 1.24 0.00 0.00 3.16
351 352 9.981114 AATAACCAACTTTTGTATCTTTTGAGG 57.019 29.630 0.00 0.00 0.00 3.86
352 353 5.842907 ACCAACTTTTGTATCTTTTGAGGC 58.157 37.500 0.00 0.00 0.00 4.70
353 354 5.362430 ACCAACTTTTGTATCTTTTGAGGCA 59.638 36.000 0.00 0.00 0.00 4.75
354 355 6.127196 ACCAACTTTTGTATCTTTTGAGGCAA 60.127 34.615 0.00 0.00 0.00 4.52
355 356 6.760770 CCAACTTTTGTATCTTTTGAGGCAAA 59.239 34.615 0.00 0.00 35.65 3.68
356 357 7.279758 CCAACTTTTGTATCTTTTGAGGCAAAA 59.720 33.333 5.36 5.36 40.41 2.44
357 358 8.663911 CAACTTTTGTATCTTTTGAGGCAAAAA 58.336 29.630 6.76 0.00 41.77 1.94
375 376 4.843220 AAAAACAGCTCTCCAACAGATG 57.157 40.909 0.00 0.00 33.31 2.90
386 387 2.934887 CCAACAGATGGTCCATATGCA 58.065 47.619 23.59 0.00 44.85 3.96
387 388 3.289836 CCAACAGATGGTCCATATGCAA 58.710 45.455 23.59 0.00 44.85 4.08
388 389 3.700539 CCAACAGATGGTCCATATGCAAA 59.299 43.478 23.59 0.00 44.85 3.68
389 390 4.160065 CCAACAGATGGTCCATATGCAAAA 59.840 41.667 23.59 0.00 44.85 2.44
390 391 5.337410 CCAACAGATGGTCCATATGCAAAAA 60.337 40.000 23.59 0.00 44.85 1.94
411 412 2.240493 AAATACATCTTCGCCTCCCG 57.760 50.000 0.00 0.00 38.61 5.14
412 413 0.393077 AATACATCTTCGCCTCCCGG 59.607 55.000 0.00 0.00 37.59 5.73
413 414 0.759436 ATACATCTTCGCCTCCCGGT 60.759 55.000 0.00 0.00 37.59 5.28
414 415 1.672854 TACATCTTCGCCTCCCGGTG 61.673 60.000 0.00 0.00 42.32 4.94
419 420 2.043752 TCGCCTCCCGGTGATGTA 60.044 61.111 0.00 0.00 44.63 2.29
420 421 1.683025 TCGCCTCCCGGTGATGTAA 60.683 57.895 0.00 0.00 44.63 2.41
421 422 1.219664 CGCCTCCCGGTGATGTAAA 59.780 57.895 0.00 0.00 43.70 2.01
422 423 0.391927 CGCCTCCCGGTGATGTAAAA 60.392 55.000 0.00 0.00 43.70 1.52
423 424 1.745827 CGCCTCCCGGTGATGTAAAAT 60.746 52.381 0.00 0.00 43.70 1.82
424 425 2.375146 GCCTCCCGGTGATGTAAAATT 58.625 47.619 0.00 0.00 0.00 1.82
425 426 2.357952 GCCTCCCGGTGATGTAAAATTC 59.642 50.000 0.00 0.00 0.00 2.17
426 427 3.616219 CCTCCCGGTGATGTAAAATTCA 58.384 45.455 0.00 0.00 0.00 2.57
427 428 4.013728 CCTCCCGGTGATGTAAAATTCAA 58.986 43.478 0.00 0.00 0.00 2.69
428 429 4.142469 CCTCCCGGTGATGTAAAATTCAAC 60.142 45.833 0.00 0.00 0.00 3.18
429 430 4.399219 TCCCGGTGATGTAAAATTCAACA 58.601 39.130 0.00 0.00 29.78 3.33
430 431 4.216687 TCCCGGTGATGTAAAATTCAACAC 59.783 41.667 0.00 0.00 37.69 3.32
435 436 4.851558 GTGATGTAAAATTCAACACCTCGC 59.148 41.667 0.00 0.00 34.22 5.03
436 437 3.529634 TGTAAAATTCAACACCTCGCG 57.470 42.857 0.00 0.00 0.00 5.87
437 438 2.224549 TGTAAAATTCAACACCTCGCGG 59.775 45.455 6.13 0.00 0.00 6.46
446 447 3.758172 ACCTCGCGGTGCAAATTT 58.242 50.000 6.13 0.00 43.51 1.82
447 448 2.935505 ACCTCGCGGTGCAAATTTA 58.064 47.368 6.13 0.00 43.51 1.40
448 449 0.519961 ACCTCGCGGTGCAAATTTAC 59.480 50.000 6.13 0.00 43.51 2.01
449 450 0.519519 CCTCGCGGTGCAAATTTACA 59.480 50.000 6.13 0.00 0.00 2.41
450 451 1.132262 CCTCGCGGTGCAAATTTACAT 59.868 47.619 6.13 0.00 0.00 2.29
451 452 2.440501 CTCGCGGTGCAAATTTACATC 58.559 47.619 6.13 0.00 0.00 3.06
452 453 2.080693 TCGCGGTGCAAATTTACATCT 58.919 42.857 6.13 0.00 0.00 2.90
453 454 2.095213 TCGCGGTGCAAATTTACATCTC 59.905 45.455 6.13 0.00 0.00 2.75
454 455 2.791158 CGCGGTGCAAATTTACATCTCC 60.791 50.000 0.00 0.00 0.00 3.71
455 456 2.791158 GCGGTGCAAATTTACATCTCCG 60.791 50.000 12.37 12.37 38.67 4.63
456 457 2.223249 CGGTGCAAATTTACATCTCCGG 60.223 50.000 9.87 0.00 33.20 5.14
457 458 3.013921 GGTGCAAATTTACATCTCCGGA 58.986 45.455 2.93 2.93 0.00 5.14
458 459 3.065371 GGTGCAAATTTACATCTCCGGAG 59.935 47.826 26.32 26.32 0.00 4.63
470 471 4.277552 CCGGAGGCAGGAGATGTA 57.722 61.111 0.00 0.00 46.14 2.29
471 472 2.516448 CCGGAGGCAGGAGATGTAA 58.484 57.895 0.00 0.00 46.14 2.41
472 473 0.830648 CCGGAGGCAGGAGATGTAAA 59.169 55.000 0.00 0.00 46.14 2.01
473 474 1.209504 CCGGAGGCAGGAGATGTAAAA 59.790 52.381 0.00 0.00 46.14 1.52
474 475 2.355716 CCGGAGGCAGGAGATGTAAAAA 60.356 50.000 0.00 0.00 46.14 1.94
475 476 2.678336 CGGAGGCAGGAGATGTAAAAAC 59.322 50.000 0.00 0.00 0.00 2.43
476 477 3.686016 GGAGGCAGGAGATGTAAAAACA 58.314 45.455 0.00 0.00 0.00 2.83
477 478 3.691609 GGAGGCAGGAGATGTAAAAACAG 59.308 47.826 0.00 0.00 0.00 3.16
478 479 3.084786 AGGCAGGAGATGTAAAAACAGC 58.915 45.455 0.00 0.00 0.00 4.40
479 480 2.159517 GGCAGGAGATGTAAAAACAGCG 60.160 50.000 0.00 0.00 0.00 5.18
480 481 2.159517 GCAGGAGATGTAAAAACAGCGG 60.160 50.000 0.00 0.00 0.00 5.52
481 482 3.074412 CAGGAGATGTAAAAACAGCGGT 58.926 45.455 0.00 0.00 0.00 5.68
482 483 3.074412 AGGAGATGTAAAAACAGCGGTG 58.926 45.455 14.13 14.13 0.00 4.94
483 484 2.161609 GGAGATGTAAAAACAGCGGTGG 59.838 50.000 20.20 0.80 0.00 4.61
484 485 1.539827 AGATGTAAAAACAGCGGTGGC 59.460 47.619 20.20 2.47 40.37 5.01
485 486 0.239879 ATGTAAAAACAGCGGTGGCG 59.760 50.000 20.20 0.00 46.35 5.69
486 487 1.728074 GTAAAAACAGCGGTGGCGC 60.728 57.895 20.20 0.00 46.35 6.53
487 488 2.187493 TAAAAACAGCGGTGGCGCA 61.187 52.632 20.20 0.00 46.35 6.09
488 489 2.395367 TAAAAACAGCGGTGGCGCAC 62.395 55.000 20.20 5.50 46.35 5.34
509 510 4.845580 CGCCCAGCCGCTCTTCAT 62.846 66.667 0.00 0.00 0.00 2.57
510 511 2.439156 GCCCAGCCGCTCTTCATT 60.439 61.111 0.00 0.00 0.00 2.57
511 512 2.048603 GCCCAGCCGCTCTTCATTT 61.049 57.895 0.00 0.00 0.00 2.32
512 513 1.997928 GCCCAGCCGCTCTTCATTTC 61.998 60.000 0.00 0.00 0.00 2.17
513 514 1.379642 CCCAGCCGCTCTTCATTTCC 61.380 60.000 0.00 0.00 0.00 3.13
514 515 0.393537 CCAGCCGCTCTTCATTTCCT 60.394 55.000 0.00 0.00 0.00 3.36
515 516 1.012841 CAGCCGCTCTTCATTTCCTC 58.987 55.000 0.00 0.00 0.00 3.71
516 517 0.107459 AGCCGCTCTTCATTTCCTCC 60.107 55.000 0.00 0.00 0.00 4.30
517 518 1.098129 GCCGCTCTTCATTTCCTCCC 61.098 60.000 0.00 0.00 0.00 4.30
518 519 0.464554 CCGCTCTTCATTTCCTCCCC 60.465 60.000 0.00 0.00 0.00 4.81
519 520 0.464554 CGCTCTTCATTTCCTCCCCC 60.465 60.000 0.00 0.00 0.00 5.40
1039 1057 0.109319 CAAGGGCAAATCCGGTTTCG 60.109 55.000 0.00 0.00 34.94 3.46
1086 1104 2.296073 ACTTCGGAGTGGAGTTCTCT 57.704 50.000 0.00 0.00 33.99 3.10
1203 1222 1.295746 GGACCTCAACTTCCCGGAC 59.704 63.158 0.73 0.00 0.00 4.79
1209 1228 1.007038 CAACTTCCCGGACGTCGAA 60.007 57.895 9.92 6.83 42.43 3.71
1255 1274 2.507452 CGCAGGGCATCCAGATGA 59.493 61.111 11.81 0.00 41.20 2.92
1268 1287 0.467384 CAGATGAAGGAGATGCCGGT 59.533 55.000 1.90 0.00 43.43 5.28
1274 1293 1.139853 GAAGGAGATGCCGGTGAAGAT 59.860 52.381 1.90 0.00 43.43 2.40
1388 1407 1.384989 GCCGAGCTGGAGCACTACTA 61.385 60.000 0.00 0.00 45.16 1.82
1392 1411 2.621055 CGAGCTGGAGCACTACTAGAAT 59.379 50.000 0.00 0.00 45.16 2.40
1402 1427 2.030091 CACTACTAGAATCGCGACGTCA 59.970 50.000 12.93 2.53 0.00 4.35
1419 1444 1.269723 GTCAAGGCGAAAAAGAAGGGG 59.730 52.381 0.00 0.00 0.00 4.79
1483 1510 0.179054 TCGAGTCGTCGGATGAGGAT 60.179 55.000 13.12 0.00 46.80 3.24
1498 1525 1.221021 GGATTGGGGTGACTCCGAC 59.779 63.158 0.00 0.00 37.00 4.79
1576 1603 2.005220 CTCCGACGACGAGGAGTAC 58.995 63.158 25.13 0.00 46.68 2.73
1696 1724 6.424683 GTCGTTTTAATCTTCGTTTTGGACT 58.575 36.000 0.00 0.00 0.00 3.85
1713 1751 4.093743 TGGACTATCTGTTGGAGTTGCTA 58.906 43.478 0.00 0.00 0.00 3.49
1864 1912 9.023962 TGCTCTTATGATGAATAAAAACTTGGT 57.976 29.630 0.00 0.00 30.24 3.67
1865 1913 9.860898 GCTCTTATGATGAATAAAAACTTGGTT 57.139 29.630 0.00 0.00 30.24 3.67
1870 1918 8.846943 ATGATGAATAAAAACTTGGTTTTCCC 57.153 30.769 8.52 1.39 43.67 3.97
1871 1919 8.028652 TGATGAATAAAAACTTGGTTTTCCCT 57.971 30.769 8.52 0.00 43.67 4.20
1872 1920 9.148879 TGATGAATAAAAACTTGGTTTTCCCTA 57.851 29.630 8.52 0.20 43.67 3.53
1873 1921 9.990360 GATGAATAAAAACTTGGTTTTCCCTAA 57.010 29.630 8.52 0.00 43.67 2.69
1909 1957 8.066612 TCATAGAAAAATGGTTCATTTCTCCC 57.933 34.615 6.37 0.00 42.32 4.30
1935 1983 7.943065 CGAAGTACATTCTTTTAACACAGTACG 59.057 37.037 0.00 0.00 36.59 3.67
1955 2003 3.126858 ACGAACGCAAAATGCTCACATAT 59.873 39.130 0.43 0.00 42.25 1.78
1956 2004 3.479590 CGAACGCAAAATGCTCACATATG 59.520 43.478 0.00 0.00 42.25 1.78
1957 2005 3.425577 ACGCAAAATGCTCACATATGG 57.574 42.857 7.80 0.00 42.25 2.74
1961 2017 4.498513 CGCAAAATGCTCACATATGGACAT 60.499 41.667 7.80 2.26 42.25 3.06
1981 2037 8.633561 TGGACATACACTATCACTCTTATGAAG 58.366 37.037 0.00 0.00 30.82 3.02
1983 2039 8.768501 ACATACACTATCACTCTTATGAAGGA 57.231 34.615 0.00 0.00 30.82 3.36
1984 2040 8.634444 ACATACACTATCACTCTTATGAAGGAC 58.366 37.037 0.00 0.00 30.82 3.85
1986 2042 5.364157 ACACTATCACTCTTATGAAGGACCC 59.636 44.000 0.00 0.00 30.82 4.46
1987 2043 5.363868 CACTATCACTCTTATGAAGGACCCA 59.636 44.000 0.00 0.00 30.82 4.51
1988 2044 4.762289 ATCACTCTTATGAAGGACCCAC 57.238 45.455 0.00 0.00 30.82 4.61
1989 2045 2.496070 TCACTCTTATGAAGGACCCACG 59.504 50.000 0.00 0.00 0.00 4.94
1990 2046 2.233922 CACTCTTATGAAGGACCCACGT 59.766 50.000 0.00 0.00 0.00 4.49
1991 2047 3.446161 CACTCTTATGAAGGACCCACGTA 59.554 47.826 0.00 0.00 0.00 3.57
1992 2048 3.446516 ACTCTTATGAAGGACCCACGTAC 59.553 47.826 0.00 0.00 0.00 3.67
1993 2049 3.433343 TCTTATGAAGGACCCACGTACA 58.567 45.455 0.00 0.00 0.00 2.90
1994 2050 3.194116 TCTTATGAAGGACCCACGTACAC 59.806 47.826 0.00 0.00 0.00 2.90
2037 2094 2.615912 GAGGTATTGAGCCTGCACAATC 59.384 50.000 16.25 9.49 38.05 2.67
2043 2100 2.362120 GCCTGCACAATCTGCCCT 60.362 61.111 0.00 0.00 46.51 5.19
2057 2114 1.452833 GCCCTCCATGAGCACCTTC 60.453 63.158 0.00 0.00 0.00 3.46
2060 2117 1.681166 CCCTCCATGAGCACCTTCAAG 60.681 57.143 0.00 0.00 0.00 3.02
2069 2126 4.089361 TGAGCACCTTCAAGATACTGAGA 58.911 43.478 0.00 0.00 0.00 3.27
2071 2128 5.893824 TGAGCACCTTCAAGATACTGAGATA 59.106 40.000 0.00 0.00 0.00 1.98
2082 2139 8.628280 TCAAGATACTGAGATACACATCTTGAG 58.372 37.037 16.71 0.00 45.14 3.02
2109 2166 2.358615 GTCACCACATGCGCCTCA 60.359 61.111 4.18 0.00 0.00 3.86
2123 2180 5.229921 TGCGCCTCATAGTCAATAAAAAC 57.770 39.130 4.18 0.00 0.00 2.43
2166 2223 9.906660 AAATTCAGAAAAATACGAGCACAAATA 57.093 25.926 0.00 0.00 0.00 1.40
2186 2243 9.802039 ACAAATACCAAGTCTAGGATTTAAACA 57.198 29.630 0.00 0.00 0.00 2.83
2221 2278 2.983192 TCCATCACAAGGAACCTAACCA 59.017 45.455 0.00 0.00 30.71 3.67
2307 2364 8.458573 TCAACAACAAAAACAGGTATACAGAT 57.541 30.769 5.01 0.00 0.00 2.90
2308 2365 8.908903 TCAACAACAAAAACAGGTATACAGATT 58.091 29.630 5.01 0.00 0.00 2.40
2309 2366 9.528018 CAACAACAAAAACAGGTATACAGATTT 57.472 29.630 5.01 1.61 0.00 2.17
2365 2422 4.636249 ACAAGTTGCAAAAACTGTTGGAA 58.364 34.783 0.00 0.00 36.60 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.861971 TGCTTCTCTGCATGCGATAG 58.138 50.000 14.09 10.15 38.12 2.08
9 10 2.314323 TTGCTTCTCTGCATGCGATA 57.686 45.000 14.09 3.51 42.96 2.92
10 11 1.676746 ATTGCTTCTCTGCATGCGAT 58.323 45.000 14.09 0.00 42.96 4.58
11 12 2.314323 TATTGCTTCTCTGCATGCGA 57.686 45.000 14.09 12.21 42.96 5.10
12 13 2.806818 AGATATTGCTTCTCTGCATGCG 59.193 45.455 14.09 8.20 42.96 4.73
13 14 4.832590 AAGATATTGCTTCTCTGCATGC 57.167 40.909 11.82 11.82 42.96 4.06
14 15 6.200100 GTCAAAGATATTGCTTCTCTGCATG 58.800 40.000 0.00 0.00 42.96 4.06
15 16 5.007430 CGTCAAAGATATTGCTTCTCTGCAT 59.993 40.000 0.00 0.00 42.96 3.96
16 17 4.330894 CGTCAAAGATATTGCTTCTCTGCA 59.669 41.667 0.00 0.00 41.65 4.41
17 18 4.260538 CCGTCAAAGATATTGCTTCTCTGC 60.261 45.833 0.00 0.00 0.00 4.26
18 19 5.111989 TCCGTCAAAGATATTGCTTCTCTG 58.888 41.667 0.00 0.00 0.00 3.35
19 20 5.344743 TCCGTCAAAGATATTGCTTCTCT 57.655 39.130 0.00 0.00 0.00 3.10
20 21 4.509600 CCTCCGTCAAAGATATTGCTTCTC 59.490 45.833 0.00 0.00 0.00 2.87
21 22 4.162320 TCCTCCGTCAAAGATATTGCTTCT 59.838 41.667 0.00 0.00 0.00 2.85
22 23 4.442706 TCCTCCGTCAAAGATATTGCTTC 58.557 43.478 0.00 0.00 0.00 3.86
23 24 4.487714 TCCTCCGTCAAAGATATTGCTT 57.512 40.909 0.00 0.00 0.00 3.91
24 25 4.346418 AGATCCTCCGTCAAAGATATTGCT 59.654 41.667 0.00 0.00 0.00 3.91
25 26 4.636249 AGATCCTCCGTCAAAGATATTGC 58.364 43.478 0.00 0.00 0.00 3.56
26 27 5.233988 GGAGATCCTCCGTCAAAGATATTG 58.766 45.833 0.00 0.00 41.08 1.90
27 28 5.476091 GGAGATCCTCCGTCAAAGATATT 57.524 43.478 0.00 0.00 41.08 1.28
40 41 8.632906 ATGAATTGTTGAATATGGAGATCCTC 57.367 34.615 0.00 0.00 36.82 3.71
41 42 8.857098 CAATGAATTGTTGAATATGGAGATCCT 58.143 33.333 0.00 0.00 33.42 3.24
58 59 5.686841 TCGAGTTTGAAGCAACAATGAATTG 59.313 36.000 1.45 1.45 43.26 2.32
59 60 5.830912 TCGAGTTTGAAGCAACAATGAATT 58.169 33.333 0.00 0.00 0.00 2.17
60 61 5.437289 TCGAGTTTGAAGCAACAATGAAT 57.563 34.783 0.00 0.00 0.00 2.57
61 62 4.891627 TCGAGTTTGAAGCAACAATGAA 57.108 36.364 0.00 0.00 0.00 2.57
62 63 4.891627 TTCGAGTTTGAAGCAACAATGA 57.108 36.364 0.00 0.00 0.00 2.57
63 64 4.797868 TGTTTCGAGTTTGAAGCAACAATG 59.202 37.500 0.00 0.00 36.35 2.82
64 65 4.992688 TGTTTCGAGTTTGAAGCAACAAT 58.007 34.783 0.00 0.00 36.35 2.71
65 66 4.427096 TGTTTCGAGTTTGAAGCAACAA 57.573 36.364 0.00 0.00 36.35 2.83
66 67 4.427096 TTGTTTCGAGTTTGAAGCAACA 57.573 36.364 7.14 0.00 41.93 3.33
67 68 5.755330 TTTTGTTTCGAGTTTGAAGCAAC 57.245 34.783 9.92 0.00 44.95 4.17
68 69 5.290643 CCATTTTGTTTCGAGTTTGAAGCAA 59.709 36.000 7.14 7.14 44.05 3.91
69 70 4.803088 CCATTTTGTTTCGAGTTTGAAGCA 59.197 37.500 0.00 0.00 37.31 3.91
70 71 4.803613 ACCATTTTGTTTCGAGTTTGAAGC 59.196 37.500 0.00 0.00 0.00 3.86
71 72 5.231991 CCACCATTTTGTTTCGAGTTTGAAG 59.768 40.000 0.00 0.00 0.00 3.02
72 73 5.105716 TCCACCATTTTGTTTCGAGTTTGAA 60.106 36.000 0.00 0.00 0.00 2.69
73 74 4.399618 TCCACCATTTTGTTTCGAGTTTGA 59.600 37.500 0.00 0.00 0.00 2.69
74 75 4.677584 TCCACCATTTTGTTTCGAGTTTG 58.322 39.130 0.00 0.00 0.00 2.93
75 76 4.993029 TCCACCATTTTGTTTCGAGTTT 57.007 36.364 0.00 0.00 0.00 2.66
76 77 4.642885 TCTTCCACCATTTTGTTTCGAGTT 59.357 37.500 0.00 0.00 0.00 3.01
77 78 4.204012 TCTTCCACCATTTTGTTTCGAGT 58.796 39.130 0.00 0.00 0.00 4.18
78 79 4.829064 TCTTCCACCATTTTGTTTCGAG 57.171 40.909 0.00 0.00 0.00 4.04
79 80 6.657117 TGATATCTTCCACCATTTTGTTTCGA 59.343 34.615 3.98 0.00 0.00 3.71
80 81 6.851609 TGATATCTTCCACCATTTTGTTTCG 58.148 36.000 3.98 0.00 0.00 3.46
81 82 8.522830 TCTTGATATCTTCCACCATTTTGTTTC 58.477 33.333 3.98 0.00 0.00 2.78
82 83 8.421249 TCTTGATATCTTCCACCATTTTGTTT 57.579 30.769 3.98 0.00 0.00 2.83
83 84 7.363268 GCTCTTGATATCTTCCACCATTTTGTT 60.363 37.037 3.98 0.00 0.00 2.83
84 85 6.096001 GCTCTTGATATCTTCCACCATTTTGT 59.904 38.462 3.98 0.00 0.00 2.83
85 86 6.320672 AGCTCTTGATATCTTCCACCATTTTG 59.679 38.462 3.98 0.00 0.00 2.44
86 87 6.430007 AGCTCTTGATATCTTCCACCATTTT 58.570 36.000 3.98 0.00 0.00 1.82
87 88 6.011122 AGCTCTTGATATCTTCCACCATTT 57.989 37.500 3.98 0.00 0.00 2.32
88 89 5.643421 AGCTCTTGATATCTTCCACCATT 57.357 39.130 3.98 0.00 0.00 3.16
89 90 5.643421 AAGCTCTTGATATCTTCCACCAT 57.357 39.130 3.98 0.00 0.00 3.55
90 91 5.441718 AAAGCTCTTGATATCTTCCACCA 57.558 39.130 3.98 0.00 0.00 4.17
91 92 5.994668 CCTAAAGCTCTTGATATCTTCCACC 59.005 44.000 3.98 0.00 0.00 4.61
92 93 5.468409 GCCTAAAGCTCTTGATATCTTCCAC 59.532 44.000 3.98 0.00 38.99 4.02
93 94 5.615289 GCCTAAAGCTCTTGATATCTTCCA 58.385 41.667 3.98 0.00 38.99 3.53
94 95 4.688413 CGCCTAAAGCTCTTGATATCTTCC 59.312 45.833 3.98 0.00 40.39 3.46
95 96 5.176590 CACGCCTAAAGCTCTTGATATCTTC 59.823 44.000 3.98 0.00 40.39 2.87
96 97 5.053145 CACGCCTAAAGCTCTTGATATCTT 58.947 41.667 3.98 0.00 40.39 2.40
97 98 4.100189 ACACGCCTAAAGCTCTTGATATCT 59.900 41.667 3.98 0.00 40.39 1.98
98 99 4.372656 ACACGCCTAAAGCTCTTGATATC 58.627 43.478 0.00 0.00 40.39 1.63
99 100 4.141937 TGACACGCCTAAAGCTCTTGATAT 60.142 41.667 0.00 0.00 40.39 1.63
100 101 3.194755 TGACACGCCTAAAGCTCTTGATA 59.805 43.478 0.00 0.00 40.39 2.15
101 102 2.028112 TGACACGCCTAAAGCTCTTGAT 60.028 45.455 0.00 0.00 40.39 2.57
102 103 1.343142 TGACACGCCTAAAGCTCTTGA 59.657 47.619 0.00 0.00 40.39 3.02
103 104 1.461127 GTGACACGCCTAAAGCTCTTG 59.539 52.381 0.00 0.00 40.39 3.02
104 105 1.608283 GGTGACACGCCTAAAGCTCTT 60.608 52.381 0.00 0.00 40.39 2.85
105 106 0.037232 GGTGACACGCCTAAAGCTCT 60.037 55.000 0.00 0.00 40.39 4.09
106 107 0.037232 AGGTGACACGCCTAAAGCTC 60.037 55.000 1.81 0.00 43.18 4.09
107 108 0.320771 CAGGTGACACGCCTAAAGCT 60.321 55.000 3.51 0.00 43.13 3.74
108 109 1.912371 GCAGGTGACACGCCTAAAGC 61.912 60.000 3.51 0.66 43.13 3.51
109 110 1.626654 CGCAGGTGACACGCCTAAAG 61.627 60.000 3.51 0.00 43.13 1.85
110 111 1.666553 CGCAGGTGACACGCCTAAA 60.667 57.895 3.51 0.00 43.13 1.85
111 112 2.048597 CGCAGGTGACACGCCTAA 60.049 61.111 3.51 0.00 43.13 2.69
112 113 4.063967 CCGCAGGTGACACGCCTA 62.064 66.667 3.51 0.00 43.13 3.93
124 125 1.148310 CGCTAATAATGTCCCCGCAG 58.852 55.000 0.00 0.00 0.00 5.18
125 126 0.753867 TCGCTAATAATGTCCCCGCA 59.246 50.000 0.00 0.00 0.00 5.69
126 127 1.000506 TCTCGCTAATAATGTCCCCGC 59.999 52.381 0.00 0.00 0.00 6.13
127 128 3.594603 ATCTCGCTAATAATGTCCCCG 57.405 47.619 0.00 0.00 0.00 5.73
128 129 6.879458 ACATTAATCTCGCTAATAATGTCCCC 59.121 38.462 4.62 0.00 42.34 4.81
129 130 7.907214 ACATTAATCTCGCTAATAATGTCCC 57.093 36.000 4.62 0.00 42.34 4.46
130 131 9.599322 CAAACATTAATCTCGCTAATAATGTCC 57.401 33.333 9.63 0.00 44.13 4.02
133 134 9.322776 GCTCAAACATTAATCTCGCTAATAATG 57.677 33.333 0.00 0.00 40.11 1.90
134 135 9.277783 AGCTCAAACATTAATCTCGCTAATAAT 57.722 29.630 0.00 0.00 0.00 1.28
135 136 8.662781 AGCTCAAACATTAATCTCGCTAATAA 57.337 30.769 0.00 0.00 0.00 1.40
136 137 8.662781 AAGCTCAAACATTAATCTCGCTAATA 57.337 30.769 0.00 0.00 0.00 0.98
137 138 7.559590 AAGCTCAAACATTAATCTCGCTAAT 57.440 32.000 0.00 0.00 0.00 1.73
138 139 6.985188 AAGCTCAAACATTAATCTCGCTAA 57.015 33.333 0.00 0.00 0.00 3.09
139 140 6.371548 ACAAAGCTCAAACATTAATCTCGCTA 59.628 34.615 0.00 0.00 0.00 4.26
140 141 5.182001 ACAAAGCTCAAACATTAATCTCGCT 59.818 36.000 0.00 0.00 0.00 4.93
141 142 5.393962 ACAAAGCTCAAACATTAATCTCGC 58.606 37.500 0.00 0.00 0.00 5.03
142 143 9.559958 AATAACAAAGCTCAAACATTAATCTCG 57.440 29.630 0.00 0.00 0.00 4.04
146 147 9.139174 CCGAAATAACAAAGCTCAAACATTAAT 57.861 29.630 0.00 0.00 0.00 1.40
147 148 8.138712 ACCGAAATAACAAAGCTCAAACATTAA 58.861 29.630 0.00 0.00 0.00 1.40
148 149 7.593273 CACCGAAATAACAAAGCTCAAACATTA 59.407 33.333 0.00 0.00 0.00 1.90
149 150 6.420604 CACCGAAATAACAAAGCTCAAACATT 59.579 34.615 0.00 0.00 0.00 2.71
150 151 5.920273 CACCGAAATAACAAAGCTCAAACAT 59.080 36.000 0.00 0.00 0.00 2.71
151 152 5.163602 ACACCGAAATAACAAAGCTCAAACA 60.164 36.000 0.00 0.00 0.00 2.83
152 153 5.278604 ACACCGAAATAACAAAGCTCAAAC 58.721 37.500 0.00 0.00 0.00 2.93
153 154 5.508200 ACACCGAAATAACAAAGCTCAAA 57.492 34.783 0.00 0.00 0.00 2.69
154 155 6.621316 TTACACCGAAATAACAAAGCTCAA 57.379 33.333 0.00 0.00 0.00 3.02
155 156 6.811253 ATTACACCGAAATAACAAAGCTCA 57.189 33.333 0.00 0.00 0.00 4.26
156 157 7.806014 TGAAATTACACCGAAATAACAAAGCTC 59.194 33.333 0.00 0.00 0.00 4.09
157 158 7.593644 GTGAAATTACACCGAAATAACAAAGCT 59.406 33.333 0.00 0.00 35.07 3.74
158 159 7.593644 AGTGAAATTACACCGAAATAACAAAGC 59.406 33.333 0.00 0.00 41.12 3.51
159 160 9.458374 AAGTGAAATTACACCGAAATAACAAAG 57.542 29.630 0.00 0.00 41.12 2.77
160 161 9.804758 AAAGTGAAATTACACCGAAATAACAAA 57.195 25.926 0.00 0.00 41.12 2.83
161 162 9.804758 AAAAGTGAAATTACACCGAAATAACAA 57.195 25.926 0.00 0.00 41.12 2.83
162 163 9.239002 CAAAAGTGAAATTACACCGAAATAACA 57.761 29.630 0.00 0.00 41.12 2.41
163 164 9.453325 TCAAAAGTGAAATTACACCGAAATAAC 57.547 29.630 0.00 0.00 41.12 1.89
166 167 8.977505 CATTCAAAAGTGAAATTACACCGAAAT 58.022 29.630 0.00 0.00 46.66 2.17
167 168 7.976734 ACATTCAAAAGTGAAATTACACCGAAA 59.023 29.630 0.00 0.00 46.66 3.46
168 169 7.484975 ACATTCAAAAGTGAAATTACACCGAA 58.515 30.769 0.00 0.00 46.66 4.30
169 170 7.033530 ACATTCAAAAGTGAAATTACACCGA 57.966 32.000 0.00 0.00 46.66 4.69
170 171 6.915300 TGACATTCAAAAGTGAAATTACACCG 59.085 34.615 0.00 0.00 46.66 4.94
171 172 8.702438 CATGACATTCAAAAGTGAAATTACACC 58.298 33.333 0.00 0.00 46.66 4.16
172 173 8.216453 GCATGACATTCAAAAGTGAAATTACAC 58.784 33.333 0.00 0.00 46.66 2.90
173 174 7.384660 GGCATGACATTCAAAAGTGAAATTACA 59.615 33.333 0.00 0.00 46.66 2.41
174 175 7.384660 TGGCATGACATTCAAAAGTGAAATTAC 59.615 33.333 0.00 0.00 46.66 1.89
175 176 7.440198 TGGCATGACATTCAAAAGTGAAATTA 58.560 30.769 0.00 0.00 46.66 1.40
176 177 6.289834 TGGCATGACATTCAAAAGTGAAATT 58.710 32.000 0.00 0.00 46.66 1.82
177 178 5.856156 TGGCATGACATTCAAAAGTGAAAT 58.144 33.333 0.00 0.00 46.66 2.17
178 179 5.273674 TGGCATGACATTCAAAAGTGAAA 57.726 34.783 0.00 0.00 46.66 2.69
180 181 4.523558 TGATGGCATGACATTCAAAAGTGA 59.476 37.500 17.03 0.00 0.00 3.41
181 182 4.811908 TGATGGCATGACATTCAAAAGTG 58.188 39.130 17.03 0.00 0.00 3.16
182 183 5.471556 TTGATGGCATGACATTCAAAAGT 57.528 34.783 17.03 0.00 0.00 2.66
183 184 6.978343 AATTGATGGCATGACATTCAAAAG 57.022 33.333 17.03 0.00 0.00 2.27
184 185 7.444487 TCAAAATTGATGGCATGACATTCAAAA 59.556 29.630 17.03 8.77 31.01 2.44
185 186 6.935208 TCAAAATTGATGGCATGACATTCAAA 59.065 30.769 17.03 11.29 31.01 2.69
186 187 6.465084 TCAAAATTGATGGCATGACATTCAA 58.535 32.000 17.03 19.69 31.01 2.69
187 188 6.038997 TCAAAATTGATGGCATGACATTCA 57.961 33.333 17.03 12.19 31.01 2.57
188 189 5.522460 CCTCAAAATTGATGGCATGACATTC 59.478 40.000 17.03 9.62 36.46 2.67
189 190 5.424757 CCTCAAAATTGATGGCATGACATT 58.575 37.500 17.03 0.00 36.46 2.71
190 191 4.682320 GCCTCAAAATTGATGGCATGACAT 60.682 41.667 15.73 15.73 44.09 3.06
191 192 3.368635 GCCTCAAAATTGATGGCATGACA 60.369 43.478 21.40 2.18 44.09 3.58
192 193 3.192466 GCCTCAAAATTGATGGCATGAC 58.808 45.455 21.40 0.00 44.09 3.06
193 194 2.832733 TGCCTCAAAATTGATGGCATGA 59.167 40.909 23.44 0.00 46.54 3.07
194 195 3.254470 TGCCTCAAAATTGATGGCATG 57.746 42.857 23.44 0.00 46.54 4.06
197 198 1.067635 ACGTGCCTCAAAATTGATGGC 60.068 47.619 20.36 20.36 44.50 4.40
198 199 2.228582 TCACGTGCCTCAAAATTGATGG 59.771 45.455 11.67 2.49 36.46 3.51
199 200 3.557577 TCACGTGCCTCAAAATTGATG 57.442 42.857 11.67 0.00 36.46 3.07
200 201 4.789012 AATCACGTGCCTCAAAATTGAT 57.211 36.364 11.67 0.00 36.46 2.57
201 202 4.582701 AAATCACGTGCCTCAAAATTGA 57.417 36.364 11.67 0.00 35.57 2.57
202 203 4.324402 GCTAAATCACGTGCCTCAAAATTG 59.676 41.667 11.67 0.00 0.00 2.32
203 204 4.485163 GCTAAATCACGTGCCTCAAAATT 58.515 39.130 11.67 0.15 0.00 1.82
204 205 3.119495 GGCTAAATCACGTGCCTCAAAAT 60.119 43.478 11.67 0.00 41.92 1.82
205 206 2.227865 GGCTAAATCACGTGCCTCAAAA 59.772 45.455 11.67 0.00 41.92 2.44
206 207 1.810151 GGCTAAATCACGTGCCTCAAA 59.190 47.619 11.67 0.00 41.92 2.69
207 208 1.271108 TGGCTAAATCACGTGCCTCAA 60.271 47.619 11.67 0.00 45.11 3.02
208 209 0.323302 TGGCTAAATCACGTGCCTCA 59.677 50.000 11.67 0.00 45.11 3.86
209 210 1.398390 CTTGGCTAAATCACGTGCCTC 59.602 52.381 11.67 0.00 45.11 4.70
210 211 1.271379 ACTTGGCTAAATCACGTGCCT 60.271 47.619 11.67 0.00 45.11 4.75
211 212 1.165270 ACTTGGCTAAATCACGTGCC 58.835 50.000 11.67 8.16 45.10 5.01
212 213 2.979813 CAAACTTGGCTAAATCACGTGC 59.020 45.455 11.67 0.00 0.00 5.34
213 214 2.979813 GCAAACTTGGCTAAATCACGTG 59.020 45.455 9.94 9.94 0.00 4.49
214 215 2.884639 AGCAAACTTGGCTAAATCACGT 59.115 40.909 0.00 0.00 40.47 4.49
215 216 3.559238 AGCAAACTTGGCTAAATCACG 57.441 42.857 0.00 0.00 40.47 4.35
216 217 5.049828 ACAAAGCAAACTTGGCTAAATCAC 58.950 37.500 0.00 0.00 41.66 3.06
217 218 5.275067 ACAAAGCAAACTTGGCTAAATCA 57.725 34.783 0.00 0.00 41.66 2.57
218 219 4.382754 CGACAAAGCAAACTTGGCTAAATC 59.617 41.667 0.00 0.00 41.66 2.17
219 220 4.298332 CGACAAAGCAAACTTGGCTAAAT 58.702 39.130 0.00 0.00 41.66 1.40
220 221 3.701241 CGACAAAGCAAACTTGGCTAAA 58.299 40.909 0.00 0.00 41.66 1.85
221 222 2.542824 GCGACAAAGCAAACTTGGCTAA 60.543 45.455 0.00 0.00 41.66 3.09
222 223 1.001815 GCGACAAAGCAAACTTGGCTA 60.002 47.619 0.00 0.00 41.66 3.93
223 224 0.249031 GCGACAAAGCAAACTTGGCT 60.249 50.000 0.00 0.00 45.15 4.75
224 225 0.249031 AGCGACAAAGCAAACTTGGC 60.249 50.000 0.00 0.00 40.15 4.52
225 226 2.350772 CCTAGCGACAAAGCAAACTTGG 60.351 50.000 0.00 0.00 40.15 3.61
226 227 2.290641 ACCTAGCGACAAAGCAAACTTG 59.709 45.455 0.00 0.00 40.15 3.16
227 228 2.572290 ACCTAGCGACAAAGCAAACTT 58.428 42.857 0.00 0.00 40.15 2.66
228 229 2.256117 ACCTAGCGACAAAGCAAACT 57.744 45.000 0.00 0.00 40.15 2.66
229 230 3.042887 CAAACCTAGCGACAAAGCAAAC 58.957 45.455 0.00 0.00 40.15 2.93
230 231 2.034053 CCAAACCTAGCGACAAAGCAAA 59.966 45.455 0.00 0.00 40.15 3.68
231 232 1.606668 CCAAACCTAGCGACAAAGCAA 59.393 47.619 0.00 0.00 40.15 3.91
232 233 1.234821 CCAAACCTAGCGACAAAGCA 58.765 50.000 0.00 0.00 40.15 3.91
233 234 1.069227 CACCAAACCTAGCGACAAAGC 60.069 52.381 0.00 0.00 37.41 3.51
234 235 2.223377 GTCACCAAACCTAGCGACAAAG 59.777 50.000 0.00 0.00 0.00 2.77
235 236 2.158871 AGTCACCAAACCTAGCGACAAA 60.159 45.455 0.00 0.00 0.00 2.83
236 237 1.414919 AGTCACCAAACCTAGCGACAA 59.585 47.619 0.00 0.00 0.00 3.18
237 238 1.000506 GAGTCACCAAACCTAGCGACA 59.999 52.381 0.00 0.00 0.00 4.35
238 239 1.672145 GGAGTCACCAAACCTAGCGAC 60.672 57.143 0.00 0.00 38.79 5.19
239 240 0.606604 GGAGTCACCAAACCTAGCGA 59.393 55.000 0.00 0.00 38.79 4.93
240 241 0.391263 GGGAGTCACCAAACCTAGCG 60.391 60.000 0.00 0.00 41.20 4.26
241 242 0.690762 TGGGAGTCACCAAACCTAGC 59.309 55.000 0.00 0.00 41.20 3.42
242 243 1.697432 TGTGGGAGTCACCAAACCTAG 59.303 52.381 2.30 0.00 45.48 3.02
243 244 1.809133 TGTGGGAGTCACCAAACCTA 58.191 50.000 2.30 0.00 45.48 3.08
244 245 0.923358 TTGTGGGAGTCACCAAACCT 59.077 50.000 2.30 0.00 45.48 3.50
245 246 1.029681 GTTGTGGGAGTCACCAAACC 58.970 55.000 2.30 0.00 45.48 3.27
246 247 1.029681 GGTTGTGGGAGTCACCAAAC 58.970 55.000 2.30 1.01 45.48 2.93
247 248 0.923358 AGGTTGTGGGAGTCACCAAA 59.077 50.000 2.30 0.00 45.48 3.28
248 249 1.809133 TAGGTTGTGGGAGTCACCAA 58.191 50.000 2.30 0.00 45.48 3.67
249 250 1.809133 TTAGGTTGTGGGAGTCACCA 58.191 50.000 0.00 0.00 45.48 4.17
250 251 2.105993 AGTTTAGGTTGTGGGAGTCACC 59.894 50.000 0.00 0.00 45.48 4.02
251 252 3.139077 CAGTTTAGGTTGTGGGAGTCAC 58.861 50.000 0.00 0.00 46.23 3.67
252 253 2.775384 ACAGTTTAGGTTGTGGGAGTCA 59.225 45.455 0.00 0.00 0.00 3.41
253 254 3.487120 ACAGTTTAGGTTGTGGGAGTC 57.513 47.619 0.00 0.00 0.00 3.36
254 255 4.019591 GGATACAGTTTAGGTTGTGGGAGT 60.020 45.833 0.00 0.00 0.00 3.85
255 256 4.514401 GGATACAGTTTAGGTTGTGGGAG 58.486 47.826 0.00 0.00 0.00 4.30
256 257 3.264964 GGGATACAGTTTAGGTTGTGGGA 59.735 47.826 0.00 0.00 39.74 4.37
257 258 3.009695 TGGGATACAGTTTAGGTTGTGGG 59.990 47.826 0.00 0.00 39.74 4.61
258 259 4.007659 GTGGGATACAGTTTAGGTTGTGG 58.992 47.826 0.00 0.00 39.74 4.17
259 260 4.454504 GTGTGGGATACAGTTTAGGTTGTG 59.545 45.833 0.00 0.00 40.69 3.33
260 261 4.648651 GTGTGGGATACAGTTTAGGTTGT 58.351 43.478 0.00 0.00 40.69 3.32
261 262 3.682858 CGTGTGGGATACAGTTTAGGTTG 59.317 47.826 0.00 0.00 40.69 3.77
262 263 3.325716 ACGTGTGGGATACAGTTTAGGTT 59.674 43.478 0.00 0.00 40.69 3.50
263 264 2.901839 ACGTGTGGGATACAGTTTAGGT 59.098 45.455 0.00 0.00 40.69 3.08
264 265 3.604875 ACGTGTGGGATACAGTTTAGG 57.395 47.619 0.00 0.00 40.69 2.69
265 266 4.151689 CACAACGTGTGGGATACAGTTTAG 59.848 45.833 9.43 0.00 44.27 1.85
266 267 4.059511 CACAACGTGTGGGATACAGTTTA 58.940 43.478 9.43 0.00 44.27 2.01
267 268 2.875933 CACAACGTGTGGGATACAGTTT 59.124 45.455 9.43 0.00 44.27 2.66
268 269 2.489971 CACAACGTGTGGGATACAGTT 58.510 47.619 9.43 0.00 44.27 3.16
269 270 2.163818 CACAACGTGTGGGATACAGT 57.836 50.000 9.43 0.00 44.27 3.55
279 280 0.105964 TGCTCTAAGCCACAACGTGT 59.894 50.000 0.00 0.00 41.51 4.49
280 281 1.394917 GATGCTCTAAGCCACAACGTG 59.605 52.381 0.00 0.00 41.51 4.49
281 282 1.276421 AGATGCTCTAAGCCACAACGT 59.724 47.619 0.00 0.00 41.51 3.99
282 283 1.929836 GAGATGCTCTAAGCCACAACG 59.070 52.381 0.00 0.00 41.51 4.10
283 284 2.284190 GGAGATGCTCTAAGCCACAAC 58.716 52.381 0.00 0.00 41.51 3.32
284 285 1.908619 TGGAGATGCTCTAAGCCACAA 59.091 47.619 0.00 0.00 41.51 3.33
285 286 1.571955 TGGAGATGCTCTAAGCCACA 58.428 50.000 0.00 0.00 41.51 4.17
286 287 2.698855 TTGGAGATGCTCTAAGCCAC 57.301 50.000 0.00 0.00 41.51 5.01
287 288 4.039730 GTCTATTGGAGATGCTCTAAGCCA 59.960 45.833 0.00 0.00 41.51 4.75
288 289 4.039730 TGTCTATTGGAGATGCTCTAAGCC 59.960 45.833 0.00 0.00 41.51 4.35
289 290 5.207110 TGTCTATTGGAGATGCTCTAAGC 57.793 43.478 0.00 0.00 42.82 3.09
290 291 6.403866 ACTGTCTATTGGAGATGCTCTAAG 57.596 41.667 0.00 0.00 34.66 2.18
291 292 5.303078 GGACTGTCTATTGGAGATGCTCTAA 59.697 44.000 7.85 0.00 36.29 2.10
292 293 4.830046 GGACTGTCTATTGGAGATGCTCTA 59.170 45.833 7.85 0.00 36.29 2.43
293 294 3.640967 GGACTGTCTATTGGAGATGCTCT 59.359 47.826 7.85 0.00 36.29 4.09
294 295 3.386078 TGGACTGTCTATTGGAGATGCTC 59.614 47.826 7.85 0.00 36.29 4.26
295 296 3.378512 TGGACTGTCTATTGGAGATGCT 58.621 45.455 7.85 0.00 36.29 3.79
296 297 3.827008 TGGACTGTCTATTGGAGATGC 57.173 47.619 7.85 0.00 36.29 3.91
297 298 7.002250 ACATATGGACTGTCTATTGGAGATG 57.998 40.000 12.01 11.10 36.29 2.90
298 299 8.727100 TTACATATGGACTGTCTATTGGAGAT 57.273 34.615 12.01 0.00 36.29 2.75
299 300 8.547481 TTTACATATGGACTGTCTATTGGAGA 57.453 34.615 12.01 1.00 0.00 3.71
300 301 9.613428 TTTTTACATATGGACTGTCTATTGGAG 57.387 33.333 12.01 3.31 0.00 3.86
307 308 9.747898 TTGGTTATTTTTACATATGGACTGTCT 57.252 29.630 7.80 0.00 0.00 3.41
308 309 9.783256 GTTGGTTATTTTTACATATGGACTGTC 57.217 33.333 7.80 0.00 0.00 3.51
309 310 9.528489 AGTTGGTTATTTTTACATATGGACTGT 57.472 29.630 7.80 0.00 0.00 3.55
325 326 9.981114 CCTCAAAAGATACAAAAGTTGGTTATT 57.019 29.630 0.00 0.00 34.12 1.40
326 327 8.088365 GCCTCAAAAGATACAAAAGTTGGTTAT 58.912 33.333 0.00 0.00 34.12 1.89
327 328 7.068839 TGCCTCAAAAGATACAAAAGTTGGTTA 59.931 33.333 0.00 0.00 34.12 2.85
328 329 6.127196 TGCCTCAAAAGATACAAAAGTTGGTT 60.127 34.615 0.00 0.00 34.12 3.67
329 330 5.362430 TGCCTCAAAAGATACAAAAGTTGGT 59.638 36.000 0.00 0.00 34.12 3.67
330 331 5.841810 TGCCTCAAAAGATACAAAAGTTGG 58.158 37.500 0.00 0.00 34.12 3.77
331 332 7.769272 TTTGCCTCAAAAGATACAAAAGTTG 57.231 32.000 0.00 0.00 29.89 3.16
332 333 8.785329 TTTTTGCCTCAAAAGATACAAAAGTT 57.215 26.923 5.11 0.00 42.91 2.66
354 355 4.843220 CATCTGTTGGAGAGCTGTTTTT 57.157 40.909 0.00 0.00 32.80 1.94
367 368 4.987408 TTTGCATATGGACCATCTGTTG 57.013 40.909 11.17 6.29 0.00 3.33
368 369 5.999205 TTTTTGCATATGGACCATCTGTT 57.001 34.783 11.17 0.00 0.00 3.16
390 391 2.943033 CGGGAGGCGAAGATGTATTTTT 59.057 45.455 0.00 0.00 0.00 1.94
391 392 2.561569 CGGGAGGCGAAGATGTATTTT 58.438 47.619 0.00 0.00 0.00 1.82
392 393 2.240493 CGGGAGGCGAAGATGTATTT 57.760 50.000 0.00 0.00 0.00 1.40
393 394 3.989104 CGGGAGGCGAAGATGTATT 57.011 52.632 0.00 0.00 0.00 1.89
406 407 4.457603 TGTTGAATTTTACATCACCGGGAG 59.542 41.667 6.32 0.00 0.00 4.30
407 408 4.216687 GTGTTGAATTTTACATCACCGGGA 59.783 41.667 6.32 0.00 34.13 5.14
408 409 4.481463 GTGTTGAATTTTACATCACCGGG 58.519 43.478 6.32 0.00 34.13 5.73
409 410 4.481463 GGTGTTGAATTTTACATCACCGG 58.519 43.478 0.00 0.00 43.39 5.28
412 413 4.851558 GCGAGGTGTTGAATTTTACATCAC 59.148 41.667 6.84 0.00 37.29 3.06
413 414 4.377943 CGCGAGGTGTTGAATTTTACATCA 60.378 41.667 0.00 0.00 0.00 3.07
414 415 4.088648 CGCGAGGTGTTGAATTTTACATC 58.911 43.478 0.00 0.00 0.00 3.06
415 416 4.078363 CGCGAGGTGTTGAATTTTACAT 57.922 40.909 0.00 0.00 0.00 2.29
416 417 3.529634 CGCGAGGTGTTGAATTTTACA 57.470 42.857 0.00 0.00 0.00 2.41
431 432 2.095853 AGATGTAAATTTGCACCGCGAG 59.904 45.455 8.23 0.00 0.00 5.03
432 433 2.080693 AGATGTAAATTTGCACCGCGA 58.919 42.857 8.23 0.00 0.00 5.87
433 434 2.440501 GAGATGTAAATTTGCACCGCG 58.559 47.619 11.35 0.00 0.00 6.46
434 435 2.791158 CGGAGATGTAAATTTGCACCGC 60.791 50.000 18.77 9.33 0.00 5.68
435 436 2.223249 CCGGAGATGTAAATTTGCACCG 60.223 50.000 21.83 21.83 37.98 4.94
436 437 3.013921 TCCGGAGATGTAAATTTGCACC 58.986 45.455 11.35 1.20 0.00 5.01
437 438 3.065371 CCTCCGGAGATGTAAATTTGCAC 59.935 47.826 33.39 6.02 0.00 4.57
438 439 3.278574 CCTCCGGAGATGTAAATTTGCA 58.721 45.455 33.39 11.51 0.00 4.08
439 440 2.033424 GCCTCCGGAGATGTAAATTTGC 59.967 50.000 33.39 18.63 0.00 3.68
440 441 3.278574 TGCCTCCGGAGATGTAAATTTG 58.721 45.455 33.39 12.63 0.00 2.32
441 442 3.545703 CTGCCTCCGGAGATGTAAATTT 58.454 45.455 33.39 0.00 0.00 1.82
442 443 2.158755 CCTGCCTCCGGAGATGTAAATT 60.159 50.000 33.39 0.00 0.00 1.82
443 444 1.417890 CCTGCCTCCGGAGATGTAAAT 59.582 52.381 33.39 0.00 0.00 1.40
444 445 0.830648 CCTGCCTCCGGAGATGTAAA 59.169 55.000 33.39 9.92 0.00 2.01
445 446 0.032515 TCCTGCCTCCGGAGATGTAA 60.033 55.000 33.39 12.13 0.00 2.41
446 447 1.618586 TCCTGCCTCCGGAGATGTA 59.381 57.895 33.39 15.28 0.00 2.29
447 448 2.364560 TCCTGCCTCCGGAGATGT 59.635 61.111 33.39 0.00 0.00 3.06
452 453 0.032515 TTACATCTCCTGCCTCCGGA 60.033 55.000 2.93 2.93 0.00 5.14
453 454 0.830648 TTTACATCTCCTGCCTCCGG 59.169 55.000 0.00 0.00 0.00 5.14
454 455 2.678336 GTTTTTACATCTCCTGCCTCCG 59.322 50.000 0.00 0.00 0.00 4.63
455 456 3.686016 TGTTTTTACATCTCCTGCCTCC 58.314 45.455 0.00 0.00 0.00 4.30
456 457 3.127721 GCTGTTTTTACATCTCCTGCCTC 59.872 47.826 0.00 0.00 0.00 4.70
457 458 3.084786 GCTGTTTTTACATCTCCTGCCT 58.915 45.455 0.00 0.00 0.00 4.75
458 459 2.159517 CGCTGTTTTTACATCTCCTGCC 60.160 50.000 0.00 0.00 0.00 4.85
459 460 2.159517 CCGCTGTTTTTACATCTCCTGC 60.160 50.000 0.00 0.00 0.00 4.85
460 461 3.074412 ACCGCTGTTTTTACATCTCCTG 58.926 45.455 0.00 0.00 0.00 3.86
461 462 3.074412 CACCGCTGTTTTTACATCTCCT 58.926 45.455 0.00 0.00 0.00 3.69
462 463 2.161609 CCACCGCTGTTTTTACATCTCC 59.838 50.000 0.00 0.00 0.00 3.71
463 464 2.414161 GCCACCGCTGTTTTTACATCTC 60.414 50.000 0.00 0.00 0.00 2.75
464 465 1.539827 GCCACCGCTGTTTTTACATCT 59.460 47.619 0.00 0.00 0.00 2.90
465 466 1.727857 CGCCACCGCTGTTTTTACATC 60.728 52.381 0.00 0.00 0.00 3.06
466 467 0.239879 CGCCACCGCTGTTTTTACAT 59.760 50.000 0.00 0.00 0.00 2.29
467 468 1.649815 CGCCACCGCTGTTTTTACA 59.350 52.632 0.00 0.00 0.00 2.41
468 469 4.526152 CGCCACCGCTGTTTTTAC 57.474 55.556 0.00 0.00 0.00 2.01
492 493 4.845580 ATGAAGAGCGGCTGGGCG 62.846 66.667 7.50 12.10 38.18 6.13
493 494 1.997928 GAAATGAAGAGCGGCTGGGC 61.998 60.000 7.50 0.00 0.00 5.36
494 495 1.379642 GGAAATGAAGAGCGGCTGGG 61.380 60.000 7.50 0.00 0.00 4.45
495 496 0.393537 AGGAAATGAAGAGCGGCTGG 60.394 55.000 7.50 0.00 0.00 4.85
496 497 1.012841 GAGGAAATGAAGAGCGGCTG 58.987 55.000 7.50 0.00 0.00 4.85
497 498 0.107459 GGAGGAAATGAAGAGCGGCT 60.107 55.000 0.00 0.00 0.00 5.52
498 499 1.098129 GGGAGGAAATGAAGAGCGGC 61.098 60.000 0.00 0.00 0.00 6.53
499 500 0.464554 GGGGAGGAAATGAAGAGCGG 60.465 60.000 0.00 0.00 0.00 5.52
500 501 0.464554 GGGGGAGGAAATGAAGAGCG 60.465 60.000 0.00 0.00 0.00 5.03
501 502 3.503998 GGGGGAGGAAATGAAGAGC 57.496 57.895 0.00 0.00 0.00 4.09
1020 1038 0.109319 CGAAACCGGATTTGCCCTTG 60.109 55.000 9.46 0.00 0.00 3.61
1255 1274 1.134280 CATCTTCACCGGCATCTCCTT 60.134 52.381 0.00 0.00 0.00 3.36
1268 1287 2.093973 GGTCTCTTCTTCGCCATCTTCA 60.094 50.000 0.00 0.00 0.00 3.02
1274 1293 2.970639 CCGGTCTCTTCTTCGCCA 59.029 61.111 0.00 0.00 0.00 5.69
1338 1357 2.528743 CGGATGCTCTCGCGCAAAT 61.529 57.895 8.75 0.00 44.06 2.32
1388 1407 1.805945 GCCTTGACGTCGCGATTCT 60.806 57.895 14.06 0.00 0.00 2.40
1402 1427 3.051617 CCCCCTTCTTTTTCGCCTT 57.948 52.632 0.00 0.00 0.00 4.35
1419 1444 1.488393 CCTCATCCTCCTTCTTCACCC 59.512 57.143 0.00 0.00 0.00 4.61
1483 1510 2.203523 TCGTCGGAGTCACCCCAA 60.204 61.111 0.00 0.00 34.64 4.12
1498 1525 3.141488 CACCCCTCGTCCTCCTCG 61.141 72.222 0.00 0.00 0.00 4.63
1846 1894 8.028652 AGGGAAAACCAAGTTTTTATTCATCA 57.971 30.769 6.88 0.00 44.33 3.07
1847 1895 9.990360 TTAGGGAAAACCAAGTTTTTATTCATC 57.010 29.630 6.88 0.00 44.33 2.92
1882 1930 8.743714 GGAGAAATGAACCATTTTTCTATGAGT 58.256 33.333 16.94 0.00 43.05 3.41
1883 1931 8.193438 GGGAGAAATGAACCATTTTTCTATGAG 58.807 37.037 16.94 0.00 43.05 2.90
1884 1932 7.148086 CGGGAGAAATGAACCATTTTTCTATGA 60.148 37.037 16.94 0.00 43.05 2.15
1885 1933 6.974622 CGGGAGAAATGAACCATTTTTCTATG 59.025 38.462 16.94 8.10 43.05 2.23
1886 1934 6.889722 TCGGGAGAAATGAACCATTTTTCTAT 59.110 34.615 16.94 1.32 43.05 1.98
1887 1935 6.242396 TCGGGAGAAATGAACCATTTTTCTA 58.758 36.000 16.94 6.23 43.05 2.10
1888 1936 5.076873 TCGGGAGAAATGAACCATTTTTCT 58.923 37.500 16.94 8.36 43.05 2.52
1889 1937 5.385509 TCGGGAGAAATGAACCATTTTTC 57.614 39.130 11.98 11.98 43.05 2.29
1905 1953 6.425721 TGTGTTAAAAGAATGTACTTCGGGAG 59.574 38.462 0.00 0.00 38.98 4.30
1909 1957 7.943065 CGTACTGTGTTAAAAGAATGTACTTCG 59.057 37.037 0.00 0.00 38.98 3.79
1955 2003 8.533569 TTCATAAGAGTGATAGTGTATGTCCA 57.466 34.615 0.00 0.00 0.00 4.02
1956 2004 8.085296 CCTTCATAAGAGTGATAGTGTATGTCC 58.915 40.741 0.00 0.00 0.00 4.02
1957 2005 8.851145 TCCTTCATAAGAGTGATAGTGTATGTC 58.149 37.037 0.00 0.00 0.00 3.06
1961 2017 6.550108 GGGTCCTTCATAAGAGTGATAGTGTA 59.450 42.308 0.00 0.00 0.00 2.90
1981 2037 2.163601 GACAGGGTGTACGTGGGTCC 62.164 65.000 0.00 0.00 39.23 4.46
1983 2039 1.152398 AGACAGGGTGTACGTGGGT 60.152 57.895 0.00 0.00 39.23 4.51
1984 2040 0.898789 AGAGACAGGGTGTACGTGGG 60.899 60.000 0.00 0.00 39.23 4.61
1986 2042 3.014623 TCATAGAGACAGGGTGTACGTG 58.985 50.000 0.00 0.00 40.69 4.49
1987 2043 3.280295 CTCATAGAGACAGGGTGTACGT 58.720 50.000 0.00 0.00 0.00 3.57
1988 2044 2.033550 GCTCATAGAGACAGGGTGTACG 59.966 54.545 0.00 0.00 0.00 3.67
1989 2045 3.024547 TGCTCATAGAGACAGGGTGTAC 58.975 50.000 0.00 0.00 0.00 2.90
1990 2046 3.024547 GTGCTCATAGAGACAGGGTGTA 58.975 50.000 0.00 0.00 0.00 2.90
1991 2047 1.827969 GTGCTCATAGAGACAGGGTGT 59.172 52.381 0.00 0.00 0.00 4.16
1992 2048 1.137872 GGTGCTCATAGAGACAGGGTG 59.862 57.143 0.00 0.00 0.00 4.61
1993 2049 1.007721 AGGTGCTCATAGAGACAGGGT 59.992 52.381 0.00 0.00 0.00 4.34
1994 2050 1.786937 AGGTGCTCATAGAGACAGGG 58.213 55.000 0.00 0.00 0.00 4.45
2037 2094 2.124403 GGTGCTCATGGAGGGCAG 60.124 66.667 0.00 0.00 36.62 4.85
2043 2100 3.776969 AGTATCTTGAAGGTGCTCATGGA 59.223 43.478 0.00 0.00 0.00 3.41
2057 2114 7.866898 CCTCAAGATGTGTATCTCAGTATCTTG 59.133 40.741 15.10 15.10 46.46 3.02
2060 2117 7.283625 ACCTCAAGATGTGTATCTCAGTATC 57.716 40.000 0.00 0.00 42.80 2.24
2069 2126 6.299141 ACTTTGTCAACCTCAAGATGTGTAT 58.701 36.000 0.00 0.00 0.00 2.29
2071 2128 4.526970 ACTTTGTCAACCTCAAGATGTGT 58.473 39.130 0.00 0.00 0.00 3.72
2166 2223 7.557719 CCATCATGTTTAAATCCTAGACTTGGT 59.442 37.037 2.75 0.00 0.00 3.67
2208 2265 5.749462 CATTCTCAGATGGTTAGGTTCCTT 58.251 41.667 0.00 0.00 0.00 3.36
2321 2378 0.889994 CTTGTATGCTTGCCCTGCAA 59.110 50.000 1.13 1.13 46.80 4.08
2331 2388 5.766150 TTGCAACTTGTAACTTGTATGCT 57.234 34.783 0.00 0.00 33.87 3.79
2337 2394 6.704512 ACAGTTTTTGCAACTTGTAACTTG 57.295 33.333 0.00 3.08 0.00 3.16
2365 2422 3.195610 TCGAGTCATGAACTGGCATTACT 59.804 43.478 0.00 0.00 38.74 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.