Multiple sequence alignment - TraesCS4D01G267600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G267600 chr4D 100.000 6284 0 0 1 6284 438262109 438255826 0.000000e+00 11605.0
1 TraesCS4D01G267600 chr4D 88.801 2161 173 43 2797 4915 438792674 438790541 0.000000e+00 2586.0
2 TraesCS4D01G267600 chr4D 91.570 344 29 0 4946 5289 438790483 438790140 5.700000e-130 475.0
3 TraesCS4D01G267600 chr4D 77.221 619 74 41 738 1309 438794462 438793864 3.680000e-77 300.0
4 TraesCS4D01G267600 chr4B 94.910 3556 114 27 2041 5578 541995177 541991671 0.000000e+00 5502.0
5 TraesCS4D01G267600 chr4B 87.559 2564 223 66 2797 5289 542754466 542751928 0.000000e+00 2880.0
6 TraesCS4D01G267600 chr4B 93.215 1459 57 20 575 2015 541996604 541995170 0.000000e+00 2108.0
7 TraesCS4D01G267600 chr4B 88.384 396 37 6 151 545 541996988 541996601 9.540000e-128 468.0
8 TraesCS4D01G267600 chr4B 90.141 284 28 0 6001 6284 279330437 279330154 2.770000e-98 370.0
9 TraesCS4D01G267600 chr4B 77.597 616 74 38 738 1309 542756238 542755643 1.320000e-81 315.0
10 TraesCS4D01G267600 chr4A 96.391 2688 70 11 2764 5446 27684623 27681958 0.000000e+00 4401.0
11 TraesCS4D01G267600 chr4A 89.089 2328 179 52 2628 4915 28250968 28248676 0.000000e+00 2822.0
12 TraesCS4D01G267600 chr4A 93.709 1065 44 10 580 1630 27686726 27685671 0.000000e+00 1574.0
13 TraesCS4D01G267600 chr4A 85.185 729 52 18 1924 2645 27685356 27684677 0.000000e+00 697.0
14 TraesCS4D01G267600 chr4A 88.740 373 41 1 4917 5289 28248646 28248275 7.430000e-124 455.0
15 TraesCS4D01G267600 chr4A 90.938 320 23 4 205 519 27687383 27687065 5.820000e-115 425.0
16 TraesCS4D01G267600 chr4A 94.979 239 10 1 6048 6284 706211210 706211448 2.140000e-99 374.0
17 TraesCS4D01G267600 chr4A 77.114 603 70 42 754 1309 28252763 28252182 2.870000e-73 287.0
18 TraesCS4D01G267600 chr4A 85.024 207 17 3 5812 6004 706210762 706210968 1.380000e-46 198.0
19 TraesCS4D01G267600 chr4A 95.370 108 5 0 46 153 695807617 695807724 8.380000e-39 172.0
20 TraesCS4D01G267600 chr4A 84.270 89 9 3 5692 5775 706210586 706210674 1.450000e-11 82.4
21 TraesCS4D01G267600 chr3B 96.127 284 11 0 6001 6284 630028327 630028044 1.230000e-126 464.0
22 TraesCS4D01G267600 chr3B 87.317 205 12 4 5813 6003 68885677 68885881 8.200000e-54 222.0
23 TraesCS4D01G267600 chr7D 95.775 284 12 0 6001 6284 157097274 157096991 5.740000e-125 459.0
24 TraesCS4D01G267600 chr7D 85.437 206 16 2 5812 6003 514100665 514100870 1.070000e-47 202.0
25 TraesCS4D01G267600 chr7D 94.545 110 6 0 46 155 621738347 621738238 3.010000e-38 171.0
26 TraesCS4D01G267600 chr7D 86.364 88 8 2 5692 5775 514100490 514100577 6.710000e-15 93.5
27 TraesCS4D01G267600 chr1B 95.390 282 13 0 6003 6284 683071226 683070945 3.460000e-122 449.0
28 TraesCS4D01G267600 chr1B 86.813 364 48 0 4517 4880 344371547 344371910 2.110000e-109 407.0
29 TraesCS4D01G267600 chr1B 86.264 364 50 0 4517 4880 421533294 421533657 4.570000e-106 396.0
30 TraesCS4D01G267600 chr1B 90.493 284 27 0 4153 4436 344371266 344371549 5.950000e-100 375.0
31 TraesCS4D01G267600 chr2A 83.702 497 52 17 5812 6284 88661258 88660767 5.780000e-120 442.0
32 TraesCS4D01G267600 chr2A 87.861 173 15 1 5837 6003 745423963 745423791 1.380000e-46 198.0
33 TraesCS4D01G267600 chr7B 94.366 284 16 0 6001 6284 321391012 321391295 2.690000e-118 436.0
34 TraesCS4D01G267600 chr5D 93.662 284 18 0 6001 6284 485888100 485888383 5.820000e-115 425.0
35 TraesCS4D01G267600 chr5D 92.174 115 9 0 39 153 70640477 70640591 5.040000e-36 163.0
36 TraesCS4D01G267600 chr3A 92.334 287 18 3 6001 6284 50548874 50549159 7.590000e-109 405.0
37 TraesCS4D01G267600 chr3A 89.017 173 13 1 5837 6003 50548675 50548847 6.380000e-50 209.0
38 TraesCS4D01G267600 chr3A 88.439 173 14 1 5837 6003 712531570 712531742 2.970000e-48 204.0
39 TraesCS4D01G267600 chr3A 86.207 87 8 2 5692 5774 712531361 712531447 2.410000e-14 91.6
40 TraesCS4D01G267600 chr1A 92.254 284 22 0 4153 4436 401223312 401223595 2.730000e-108 403.0
41 TraesCS4D01G267600 chr1A 86.264 364 50 0 4517 4880 391844311 391844674 4.570000e-106 396.0
42 TraesCS4D01G267600 chr1A 85.217 230 29 4 3671 3898 391824705 391824931 1.360000e-56 231.0
43 TraesCS4D01G267600 chr1A 91.270 126 7 3 38 161 384334565 384334442 1.080000e-37 169.0
44 TraesCS4D01G267600 chr1A 92.308 117 9 0 37 153 58903727 58903843 3.900000e-37 167.0
45 TraesCS4D01G267600 chr1A 87.500 72 9 0 3992 4063 401223242 401223313 4.040000e-12 84.2
46 TraesCS4D01G267600 chr1D 86.264 364 50 0 4517 4880 311687459 311687822 4.570000e-106 396.0
47 TraesCS4D01G267600 chr1D 90.493 284 27 0 4153 4436 311687178 311687461 5.950000e-100 375.0
48 TraesCS4D01G267600 chr1D 90.141 284 28 0 4153 4436 345377924 345377641 2.770000e-98 370.0
49 TraesCS4D01G267600 chr1D 86.667 225 26 3 3672 3894 345378215 345377993 4.870000e-61 246.0
50 TraesCS4D01G267600 chrUn 85.217 230 29 4 3671 3898 918733 918507 1.360000e-56 231.0
51 TraesCS4D01G267600 chrUn 85.217 230 29 4 3671 3898 361078349 361078123 1.360000e-56 231.0
52 TraesCS4D01G267600 chr7A 89.595 173 12 1 5837 6003 242625634 242625806 1.370000e-51 215.0
53 TraesCS4D01G267600 chr7A 89.017 173 13 1 5837 6003 117548151 117548323 6.380000e-50 209.0
54 TraesCS4D01G267600 chr7A 87.356 174 16 1 5837 6004 125651792 125651965 1.790000e-45 195.0
55 TraesCS4D01G267600 chr7A 91.270 126 8 3 35 159 697132998 697132875 1.080000e-37 169.0
56 TraesCS4D01G267600 chr7A 93.750 112 7 0 44 155 729073218 729073329 1.080000e-37 169.0
57 TraesCS4D01G267600 chr7A 86.364 88 8 2 5692 5775 125651583 125651670 6.710000e-15 93.5
58 TraesCS4D01G267600 chr7A 85.057 87 9 2 5692 5774 117547942 117548028 1.120000e-12 86.1
59 TraesCS4D01G267600 chr7A 84.091 88 10 2 5692 5775 242664906 242664993 1.450000e-11 82.4
60 TraesCS4D01G267600 chr7A 83.750 80 9 2 5700 5775 242625433 242625512 8.740000e-09 73.1
61 TraesCS4D01G267600 chr2D 92.308 117 7 2 38 154 639161477 639161591 1.400000e-36 165.0
62 TraesCS4D01G267600 chr2B 92.308 117 8 1 37 153 783405508 783405623 1.400000e-36 165.0
63 TraesCS4D01G267600 chr5B 86.517 89 7 2 5692 5775 550422011 550422099 6.710000e-15 93.5
64 TraesCS4D01G267600 chr5B 85.882 85 8 2 5695 5775 279116739 279116655 3.120000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G267600 chr4D 438255826 438262109 6283 True 11605.000000 11605 100.000000 1 6284 1 chr4D.!!$R1 6283
1 TraesCS4D01G267600 chr4D 438790140 438794462 4322 True 1120.333333 2586 85.864000 738 5289 3 chr4D.!!$R2 4551
2 TraesCS4D01G267600 chr4B 541991671 541996988 5317 True 2692.666667 5502 92.169667 151 5578 3 chr4B.!!$R2 5427
3 TraesCS4D01G267600 chr4B 542751928 542756238 4310 True 1597.500000 2880 82.578000 738 5289 2 chr4B.!!$R3 4551
4 TraesCS4D01G267600 chr4A 27681958 27687383 5425 True 1774.250000 4401 91.555750 205 5446 4 chr4A.!!$R1 5241
5 TraesCS4D01G267600 chr4A 28248275 28252763 4488 True 1188.000000 2822 84.981000 754 5289 3 chr4A.!!$R2 4535
6 TraesCS4D01G267600 chr4A 706210586 706211448 862 False 218.133333 374 88.091000 5692 6284 3 chr4A.!!$F2 592
7 TraesCS4D01G267600 chr1B 344371266 344371910 644 False 391.000000 407 88.653000 4153 4880 2 chr1B.!!$F2 727
8 TraesCS4D01G267600 chr1D 311687178 311687822 644 False 385.500000 396 88.378500 4153 4880 2 chr1D.!!$F1 727
9 TraesCS4D01G267600 chr1D 345377641 345378215 574 True 308.000000 370 88.404000 3672 4436 2 chr1D.!!$R1 764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 889 0.033781 TACCAAACCCGTCGACAAGG 59.966 55.0 17.16 17.51 0.00 3.61 F
614 897 0.179205 CCGTCGACAAGGTACGAGAC 60.179 60.0 17.16 0.00 38.89 3.36 F
1331 1668 0.579156 GTTCCTGCGCGATTCATCTC 59.421 55.0 12.10 0.00 0.00 2.75 F
2843 3674 0.036294 ACTTCCTTGAAGCCTACCGC 60.036 55.0 3.82 0.00 42.79 5.68 F
4665 5561 0.543277 TCATAGACCCTGCCTTGCTG 59.457 55.0 0.00 0.00 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1413 1751 0.179100 CGGTACCATGAGCTCACCAG 60.179 60.0 20.97 13.1 0.00 4.00 R
1636 2098 0.626916 CCCGACCCTTAAATCCCCAA 59.373 55.0 0.00 0.0 0.00 4.12 R
2873 3704 0.830648 CGCTTCTCATTCCACCCCTA 59.169 55.0 0.00 0.0 0.00 3.53 R
4827 5723 0.675633 AAGCACGCTGGCAAATTTCT 59.324 45.0 0.00 0.0 35.83 2.52 R
5780 6728 0.251916 CGCCTGGTGGGATTCTGTTA 59.748 55.0 0.00 0.0 37.23 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.934507 CGTAGGAATTTTCTTCTATCTTGTCT 57.065 34.615 0.00 0.00 0.00 3.41
26 27 9.372369 CGTAGGAATTTTCTTCTATCTTGTCTT 57.628 33.333 0.00 0.00 0.00 3.01
56 57 4.569719 AAAAATCATGTACTCCCTCCGT 57.430 40.909 0.00 0.00 0.00 4.69
57 58 4.569719 AAAATCATGTACTCCCTCCGTT 57.430 40.909 0.00 0.00 0.00 4.44
58 59 3.821421 AATCATGTACTCCCTCCGTTC 57.179 47.619 0.00 0.00 0.00 3.95
59 60 2.225382 TCATGTACTCCCTCCGTTCA 57.775 50.000 0.00 0.00 0.00 3.18
60 61 1.822990 TCATGTACTCCCTCCGTTCAC 59.177 52.381 0.00 0.00 0.00 3.18
61 62 1.825474 CATGTACTCCCTCCGTTCACT 59.175 52.381 0.00 0.00 0.00 3.41
62 63 2.005370 TGTACTCCCTCCGTTCACTT 57.995 50.000 0.00 0.00 0.00 3.16
63 64 2.322658 TGTACTCCCTCCGTTCACTTT 58.677 47.619 0.00 0.00 0.00 2.66
64 65 2.701951 TGTACTCCCTCCGTTCACTTTT 59.298 45.455 0.00 0.00 0.00 2.27
65 66 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
66 67 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
67 68 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
68 69 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
69 70 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
70 71 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
71 72 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
72 73 4.124238 CCTCCGTTCACTTTTGTAAGTCA 58.876 43.478 0.00 0.00 42.67 3.41
73 74 4.755123 CCTCCGTTCACTTTTGTAAGTCAT 59.245 41.667 0.00 0.00 42.67 3.06
74 75 5.238650 CCTCCGTTCACTTTTGTAAGTCATT 59.761 40.000 0.00 0.00 42.67 2.57
75 76 6.238648 CCTCCGTTCACTTTTGTAAGTCATTT 60.239 38.462 0.00 0.00 42.67 2.32
76 77 6.721321 TCCGTTCACTTTTGTAAGTCATTTC 58.279 36.000 0.00 0.00 42.67 2.17
77 78 6.316640 TCCGTTCACTTTTGTAAGTCATTTCA 59.683 34.615 0.00 0.00 42.67 2.69
78 79 6.632834 CCGTTCACTTTTGTAAGTCATTTCAG 59.367 38.462 0.00 0.00 42.67 3.02
79 80 7.406553 CGTTCACTTTTGTAAGTCATTTCAGA 58.593 34.615 0.00 0.00 42.67 3.27
80 81 7.373441 CGTTCACTTTTGTAAGTCATTTCAGAC 59.627 37.037 0.00 0.00 42.67 3.51
81 82 7.857734 TCACTTTTGTAAGTCATTTCAGACA 57.142 32.000 0.00 0.00 42.67 3.41
82 83 8.275015 TCACTTTTGTAAGTCATTTCAGACAA 57.725 30.769 0.00 0.00 42.67 3.18
83 84 8.181573 TCACTTTTGTAAGTCATTTCAGACAAC 58.818 33.333 0.00 0.00 42.67 3.32
84 85 8.184192 CACTTTTGTAAGTCATTTCAGACAACT 58.816 33.333 0.00 0.00 42.67 3.16
85 86 8.398665 ACTTTTGTAAGTCATTTCAGACAACTC 58.601 33.333 0.00 0.00 40.60 3.01
86 87 7.857734 TTTGTAAGTCATTTCAGACAACTCA 57.142 32.000 0.00 0.00 40.98 3.41
87 88 7.857734 TTGTAAGTCATTTCAGACAACTCAA 57.142 32.000 0.00 0.00 40.98 3.02
88 89 7.857734 TGTAAGTCATTTCAGACAACTCAAA 57.142 32.000 0.00 0.00 40.98 2.69
89 90 8.275015 TGTAAGTCATTTCAGACAACTCAAAA 57.725 30.769 0.00 0.00 40.98 2.44
90 91 8.902806 TGTAAGTCATTTCAGACAACTCAAAAT 58.097 29.630 0.00 0.00 40.98 1.82
93 94 8.103948 AGTCATTTCAGACAACTCAAAATAGG 57.896 34.615 0.00 0.00 40.98 2.57
94 95 7.721399 AGTCATTTCAGACAACTCAAAATAGGT 59.279 33.333 0.00 0.00 40.98 3.08
95 96 8.352942 GTCATTTCAGACAACTCAAAATAGGTT 58.647 33.333 0.00 0.00 38.40 3.50
96 97 8.352201 TCATTTCAGACAACTCAAAATAGGTTG 58.648 33.333 0.00 0.00 43.84 3.77
103 104 6.900568 CAACTCAAAATAGGTTGTTTTGCA 57.099 33.333 6.49 0.00 43.04 4.08
104 105 6.704819 CAACTCAAAATAGGTTGTTTTGCAC 58.295 36.000 6.49 0.00 43.04 4.57
105 106 5.971763 ACTCAAAATAGGTTGTTTTGCACA 58.028 33.333 6.49 0.00 43.04 4.57
106 107 6.581712 ACTCAAAATAGGTTGTTTTGCACAT 58.418 32.000 6.49 0.00 43.04 3.21
107 108 7.047271 ACTCAAAATAGGTTGTTTTGCACATT 58.953 30.769 6.49 0.00 43.04 2.71
108 109 7.011295 ACTCAAAATAGGTTGTTTTGCACATTG 59.989 33.333 6.49 0.00 43.04 2.82
109 110 6.820656 TCAAAATAGGTTGTTTTGCACATTGT 59.179 30.769 6.49 0.00 43.04 2.71
110 111 7.335422 TCAAAATAGGTTGTTTTGCACATTGTT 59.665 29.630 6.49 0.00 43.04 2.83
111 112 7.622893 AAATAGGTTGTTTTGCACATTGTTT 57.377 28.000 0.00 0.00 34.43 2.83
112 113 4.943142 AGGTTGTTTTGCACATTGTTTG 57.057 36.364 0.00 0.00 34.43 2.93
113 114 4.573900 AGGTTGTTTTGCACATTGTTTGA 58.426 34.783 0.00 0.00 34.43 2.69
114 115 4.999950 AGGTTGTTTTGCACATTGTTTGAA 59.000 33.333 0.00 0.00 34.43 2.69
115 116 5.647225 AGGTTGTTTTGCACATTGTTTGAAT 59.353 32.000 0.00 0.00 34.43 2.57
116 117 6.150809 AGGTTGTTTTGCACATTGTTTGAATT 59.849 30.769 0.00 0.00 34.43 2.17
117 118 7.335422 AGGTTGTTTTGCACATTGTTTGAATTA 59.665 29.630 0.00 0.00 34.43 1.40
118 119 8.127954 GGTTGTTTTGCACATTGTTTGAATTAT 58.872 29.630 0.00 0.00 34.43 1.28
119 120 9.157259 GTTGTTTTGCACATTGTTTGAATTATC 57.843 29.630 0.00 0.00 34.43 1.75
120 121 8.659925 TGTTTTGCACATTGTTTGAATTATCT 57.340 26.923 0.00 0.00 0.00 1.98
121 122 8.763356 TGTTTTGCACATTGTTTGAATTATCTC 58.237 29.630 0.00 0.00 0.00 2.75
122 123 7.887996 TTTGCACATTGTTTGAATTATCTCC 57.112 32.000 0.00 0.00 0.00 3.71
123 124 6.587206 TGCACATTGTTTGAATTATCTCCA 57.413 33.333 0.00 0.00 0.00 3.86
124 125 6.990798 TGCACATTGTTTGAATTATCTCCAA 58.009 32.000 0.00 0.00 0.00 3.53
125 126 7.092079 TGCACATTGTTTGAATTATCTCCAAG 58.908 34.615 0.00 0.00 0.00 3.61
126 127 6.532657 GCACATTGTTTGAATTATCTCCAAGG 59.467 38.462 0.00 0.00 0.00 3.61
127 128 7.605449 CACATTGTTTGAATTATCTCCAAGGT 58.395 34.615 0.00 0.00 0.00 3.50
128 129 7.756722 CACATTGTTTGAATTATCTCCAAGGTC 59.243 37.037 0.00 0.00 0.00 3.85
129 130 7.671398 ACATTGTTTGAATTATCTCCAAGGTCT 59.329 33.333 0.00 0.00 0.00 3.85
130 131 7.687941 TTGTTTGAATTATCTCCAAGGTCTC 57.312 36.000 0.00 0.00 0.00 3.36
131 132 6.778821 TGTTTGAATTATCTCCAAGGTCTCA 58.221 36.000 0.00 0.00 0.00 3.27
132 133 7.405292 TGTTTGAATTATCTCCAAGGTCTCAT 58.595 34.615 0.00 0.00 0.00 2.90
133 134 8.548025 TGTTTGAATTATCTCCAAGGTCTCATA 58.452 33.333 0.00 0.00 0.00 2.15
134 135 9.396022 GTTTGAATTATCTCCAAGGTCTCATAA 57.604 33.333 0.00 0.00 0.00 1.90
135 136 9.973661 TTTGAATTATCTCCAAGGTCTCATAAA 57.026 29.630 0.00 0.00 0.00 1.40
136 137 9.973661 TTGAATTATCTCCAAGGTCTCATAAAA 57.026 29.630 0.00 0.00 0.00 1.52
137 138 9.618890 TGAATTATCTCCAAGGTCTCATAAAAG 57.381 33.333 0.00 0.00 0.00 2.27
138 139 9.620259 GAATTATCTCCAAGGTCTCATAAAAGT 57.380 33.333 0.00 0.00 0.00 2.66
139 140 8.970859 ATTATCTCCAAGGTCTCATAAAAGTG 57.029 34.615 0.00 0.00 0.00 3.16
140 141 6.627087 ATCTCCAAGGTCTCATAAAAGTGA 57.373 37.500 0.00 0.00 0.00 3.41
141 142 6.433847 TCTCCAAGGTCTCATAAAAGTGAA 57.566 37.500 0.00 0.00 0.00 3.18
142 143 6.231211 TCTCCAAGGTCTCATAAAAGTGAAC 58.769 40.000 0.00 0.00 0.00 3.18
143 144 5.935945 TCCAAGGTCTCATAAAAGTGAACA 58.064 37.500 0.00 0.00 0.00 3.18
144 145 5.997746 TCCAAGGTCTCATAAAAGTGAACAG 59.002 40.000 0.00 0.00 0.00 3.16
145 146 5.997746 CCAAGGTCTCATAAAAGTGAACAGA 59.002 40.000 0.00 0.00 0.00 3.41
146 147 6.148480 CCAAGGTCTCATAAAAGTGAACAGAG 59.852 42.308 0.00 0.00 0.00 3.35
147 148 5.799213 AGGTCTCATAAAAGTGAACAGAGG 58.201 41.667 0.00 0.00 0.00 3.69
148 149 4.938226 GGTCTCATAAAAGTGAACAGAGGG 59.062 45.833 0.00 0.00 0.00 4.30
149 150 5.280011 GGTCTCATAAAAGTGAACAGAGGGA 60.280 44.000 0.00 0.00 0.00 4.20
155 156 4.875561 AAAGTGAACAGAGGGAGTACTC 57.124 45.455 14.87 14.87 37.77 2.59
190 191 2.895404 ACAAGGCTCAGCAACAATCAAT 59.105 40.909 0.00 0.00 0.00 2.57
198 199 5.681437 GCTCAGCAACAATCAATGATTCCAT 60.681 40.000 5.36 0.00 28.87 3.41
203 204 7.279981 CAGCAACAATCAATGATTCCATCAATT 59.720 33.333 5.36 0.00 43.50 2.32
249 250 5.745227 AGGTACATTGAAGATGGTCGAATT 58.255 37.500 0.00 0.00 0.00 2.17
253 254 0.726827 TGAAGATGGTCGAATTGCGC 59.273 50.000 0.00 0.00 40.61 6.09
276 277 4.213270 CGAATGTGCTTGTCTTTCCAACTA 59.787 41.667 0.00 0.00 0.00 2.24
302 303 5.554070 TCATCAACAGAGCTGAGAAAATCA 58.446 37.500 4.21 0.00 36.21 2.57
382 384 6.582672 GCTGTTTAATCTCCAAAAACTAGTGC 59.417 38.462 0.00 0.00 34.84 4.40
517 521 5.015178 TCAATTCCATTAACAACCTCCCTCT 59.985 40.000 0.00 0.00 0.00 3.69
520 524 4.662278 TCCATTAACAACCTCCCTCTTTG 58.338 43.478 0.00 0.00 0.00 2.77
521 525 3.763897 CCATTAACAACCTCCCTCTTTGG 59.236 47.826 0.00 0.00 0.00 3.28
523 527 5.515886 CCATTAACAACCTCCCTCTTTGGTA 60.516 44.000 0.00 0.00 33.17 3.25
541 545 9.969001 TCTTTGGTAGTAAAAGGTATATTTGCT 57.031 29.630 0.00 0.00 36.77 3.91
546 550 9.486497 GGTAGTAAAAGGTATATTTGCTACTCC 57.514 37.037 19.36 7.28 46.35 3.85
547 551 9.486497 GTAGTAAAAGGTATATTTGCTACTCCC 57.514 37.037 15.40 0.00 45.02 4.30
549 553 8.430431 AGTAAAAGGTATATTTGCTACTCCCTC 58.570 37.037 0.00 0.00 32.08 4.30
550 554 5.827326 AAGGTATATTTGCTACTCCCTCC 57.173 43.478 0.00 0.00 0.00 4.30
552 556 3.577415 GGTATATTTGCTACTCCCTCCGT 59.423 47.826 0.00 0.00 0.00 4.69
554 558 2.693267 ATTTGCTACTCCCTCCGTTC 57.307 50.000 0.00 0.00 0.00 3.95
555 559 1.344065 TTTGCTACTCCCTCCGTTCA 58.656 50.000 0.00 0.00 0.00 3.18
556 560 0.606604 TTGCTACTCCCTCCGTTCAC 59.393 55.000 0.00 0.00 0.00 3.18
557 561 1.139095 GCTACTCCCTCCGTTCACG 59.861 63.158 0.00 0.00 39.44 4.35
558 562 1.593296 GCTACTCCCTCCGTTCACGT 61.593 60.000 0.00 0.00 37.74 4.49
560 564 2.295885 CTACTCCCTCCGTTCACGTAT 58.704 52.381 0.00 0.00 37.74 3.06
562 566 1.897802 ACTCCCTCCGTTCACGTATTT 59.102 47.619 0.00 0.00 37.74 1.40
563 567 2.301009 ACTCCCTCCGTTCACGTATTTT 59.699 45.455 0.00 0.00 37.74 1.82
564 568 2.671396 CTCCCTCCGTTCACGTATTTTG 59.329 50.000 0.00 0.00 37.74 2.44
566 570 2.414138 CCCTCCGTTCACGTATTTTGAC 59.586 50.000 0.00 0.00 37.74 3.18
567 571 3.061322 CCTCCGTTCACGTATTTTGACA 58.939 45.455 0.00 0.00 37.74 3.58
568 572 3.120786 CCTCCGTTCACGTATTTTGACAC 60.121 47.826 0.00 0.00 37.74 3.67
569 573 3.719924 TCCGTTCACGTATTTTGACACT 58.280 40.909 0.00 0.00 37.74 3.55
570 574 4.869215 TCCGTTCACGTATTTTGACACTA 58.131 39.130 0.00 0.00 37.74 2.74
571 575 4.919168 TCCGTTCACGTATTTTGACACTAG 59.081 41.667 0.00 0.00 37.74 2.57
572 576 4.682860 CCGTTCACGTATTTTGACACTAGT 59.317 41.667 0.00 0.00 37.74 2.57
573 577 5.388061 CCGTTCACGTATTTTGACACTAGTG 60.388 44.000 21.44 21.44 37.74 2.74
605 888 1.997606 GATACCAAACCCGTCGACAAG 59.002 52.381 17.16 8.36 0.00 3.16
606 889 0.033781 TACCAAACCCGTCGACAAGG 59.966 55.000 17.16 17.51 0.00 3.61
614 897 0.179205 CCGTCGACAAGGTACGAGAC 60.179 60.000 17.16 0.00 38.89 3.36
740 1030 4.760047 CTTCCAGGTGGCCCGACG 62.760 72.222 0.00 0.00 35.12 5.12
1122 1451 5.096443 TGGCCTTCTTTTGTTGATTTGTT 57.904 34.783 3.32 0.00 0.00 2.83
1173 1510 1.159098 ACTACTCGACGGCGATCCTC 61.159 60.000 16.81 0.00 46.80 3.71
1177 1514 3.270092 CGACGGCGATCCTCGAGA 61.270 66.667 16.62 0.00 43.74 4.04
1309 1646 1.313812 CGTCCTCCTCAAGGTACGCT 61.314 60.000 7.87 0.00 46.32 5.07
1331 1668 0.579156 GTTCCTGCGCGATTCATCTC 59.421 55.000 12.10 0.00 0.00 2.75
1343 1680 6.584954 CGCGATTCATCTCTTTATTAGGTTG 58.415 40.000 0.00 0.00 0.00 3.77
1344 1681 6.420903 CGCGATTCATCTCTTTATTAGGTTGA 59.579 38.462 0.00 0.00 0.00 3.18
1374 1712 5.470098 TCTGAGTGCTGAGTTGGTTAATTTC 59.530 40.000 0.00 0.00 0.00 2.17
1413 1751 0.731514 TGGTTTCGTCGCGAGTGATC 60.732 55.000 10.24 7.19 37.14 2.92
1482 1820 4.295870 GGAAAAACCTAAGCTTTTGTCGG 58.704 43.478 3.20 0.54 35.41 4.79
1525 1863 3.153919 TGGTTGGTGGCAATTTAGTCTC 58.846 45.455 0.00 0.00 0.00 3.36
1597 1935 5.649831 GGTGATTAATTCTGAGCTTGGTCTT 59.350 40.000 0.00 0.00 0.00 3.01
1610 1948 5.006386 AGCTTGGTCTTTAGATTCAACAGG 58.994 41.667 0.00 0.00 0.00 4.00
1620 1958 2.040412 AGATTCAACAGGGTTCTGGGTC 59.960 50.000 0.00 0.00 44.99 4.46
1749 2216 6.215121 CAACACTGCTTATTGATGTTTGGAA 58.785 36.000 0.00 0.00 31.25 3.53
1825 2315 5.631119 GATATGTTAACCTAGGCCAATGGT 58.369 41.667 9.30 7.06 35.29 3.55
1878 2382 7.610305 TGAAAACCTTATCTTTCTCATGTACCC 59.390 37.037 0.00 0.00 33.55 3.69
1879 2383 6.893020 AACCTTATCTTTCTCATGTACCCT 57.107 37.500 0.00 0.00 0.00 4.34
1880 2384 7.989947 AACCTTATCTTTCTCATGTACCCTA 57.010 36.000 0.00 0.00 0.00 3.53
1881 2385 8.568617 AACCTTATCTTTCTCATGTACCCTAT 57.431 34.615 0.00 0.00 0.00 2.57
1882 2386 8.568617 ACCTTATCTTTCTCATGTACCCTATT 57.431 34.615 0.00 0.00 0.00 1.73
1883 2387 9.004231 ACCTTATCTTTCTCATGTACCCTATTT 57.996 33.333 0.00 0.00 0.00 1.40
1884 2388 9.495572 CCTTATCTTTCTCATGTACCCTATTTC 57.504 37.037 0.00 0.00 0.00 2.17
1885 2389 9.495572 CTTATCTTTCTCATGTACCCTATTTCC 57.504 37.037 0.00 0.00 0.00 3.13
1886 2390 7.698163 ATCTTTCTCATGTACCCTATTTCCT 57.302 36.000 0.00 0.00 0.00 3.36
1930 2434 6.126409 TGTAATTGACCTTTCTCCTGTTTGT 58.874 36.000 0.00 0.00 0.00 2.83
1971 2475 3.000727 GTGTTGCTACTGCCGATACTTT 58.999 45.455 0.00 0.00 38.71 2.66
2025 2530 8.720562 TGTGTTCTGTATTGACACATTCATTAG 58.279 33.333 4.59 0.00 36.54 1.73
2026 2531 8.935844 GTGTTCTGTATTGACACATTCATTAGA 58.064 33.333 0.00 0.00 32.84 2.10
2090 2733 9.372369 GTATCCTTTATCTGTGGCACTATATTC 57.628 37.037 19.83 0.00 0.00 1.75
2283 2938 2.106338 TGGTGATGTGGTGTCTGTTCAT 59.894 45.455 0.00 0.00 0.00 2.57
2292 2947 1.474077 GTGTCTGTTCATCAATGCCCC 59.526 52.381 0.00 0.00 0.00 5.80
2501 3159 2.676632 TTTTGCCTAGCATTGCCATG 57.323 45.000 4.70 0.00 38.76 3.66
2510 3168 2.890612 CATTGCCATGCCCTCTTGA 58.109 52.632 0.00 0.00 0.00 3.02
2511 3169 0.458669 CATTGCCATGCCCTCTTGAC 59.541 55.000 0.00 0.00 0.00 3.18
2512 3170 0.333993 ATTGCCATGCCCTCTTGACT 59.666 50.000 0.00 0.00 0.00 3.41
2602 3267 6.099159 ACCTTCCTCAGTGTTTTAGACTAC 57.901 41.667 0.00 0.00 0.00 2.73
2604 3269 6.159988 CCTTCCTCAGTGTTTTAGACTACAG 58.840 44.000 0.00 0.00 0.00 2.74
2670 3478 6.380560 TCATGATTCATTAATTCCTTGTGCCA 59.619 34.615 0.00 0.00 0.00 4.92
2671 3479 5.964758 TGATTCATTAATTCCTTGTGCCAC 58.035 37.500 0.00 0.00 0.00 5.01
2674 3482 5.999205 TCATTAATTCCTTGTGCCACATT 57.001 34.783 0.00 0.00 0.00 2.71
2675 3483 6.357579 TCATTAATTCCTTGTGCCACATTT 57.642 33.333 0.00 0.00 0.00 2.32
2676 3484 7.473735 TCATTAATTCCTTGTGCCACATTTA 57.526 32.000 0.00 0.00 0.00 1.40
2678 3486 8.034215 TCATTAATTCCTTGTGCCACATTTAAG 58.966 33.333 0.00 0.00 0.00 1.85
2679 3487 5.806654 AATTCCTTGTGCCACATTTAAGT 57.193 34.783 0.00 0.00 0.00 2.24
2680 3488 5.806654 ATTCCTTGTGCCACATTTAAGTT 57.193 34.783 0.00 0.00 0.00 2.66
2681 3489 6.909550 ATTCCTTGTGCCACATTTAAGTTA 57.090 33.333 0.00 0.00 0.00 2.24
2682 3490 5.957842 TCCTTGTGCCACATTTAAGTTAG 57.042 39.130 0.00 0.00 0.00 2.34
2683 3491 5.626142 TCCTTGTGCCACATTTAAGTTAGA 58.374 37.500 0.00 0.00 0.00 2.10
2684 3492 6.245408 TCCTTGTGCCACATTTAAGTTAGAT 58.755 36.000 0.00 0.00 0.00 1.98
2685 3493 6.719370 TCCTTGTGCCACATTTAAGTTAGATT 59.281 34.615 0.00 0.00 0.00 2.40
2686 3494 6.808212 CCTTGTGCCACATTTAAGTTAGATTG 59.192 38.462 0.00 0.00 0.00 2.67
2687 3495 5.708948 TGTGCCACATTTAAGTTAGATTGC 58.291 37.500 0.00 0.00 0.00 3.56
2698 3506 7.996098 TTAAGTTAGATTGCTGCTAAACCTT 57.004 32.000 0.00 0.00 30.34 3.50
2700 3508 6.901081 AGTTAGATTGCTGCTAAACCTTTT 57.099 33.333 0.00 0.00 30.34 2.27
2744 3552 7.255942 CCTTTGTTTTGTTGGGATGATCTACTT 60.256 37.037 0.00 0.00 0.00 2.24
2786 3617 4.327680 ACTTAGTTGCATCCAAGAACCTC 58.672 43.478 9.52 0.00 0.00 3.85
2837 3668 2.991250 TCAGCATACTTCCTTGAAGCC 58.009 47.619 3.82 0.00 42.79 4.35
2843 3674 0.036294 ACTTCCTTGAAGCCTACCGC 60.036 55.000 3.82 0.00 42.79 5.68
2891 3722 2.026262 TGTTAGGGGTGGAATGAGAAGC 60.026 50.000 0.00 0.00 0.00 3.86
3209 4040 0.741221 AGACGGGCGCATTCTTCTTC 60.741 55.000 10.83 0.00 0.00 2.87
3473 4304 1.676006 CGCCCAAACAGTATTGATCCC 59.324 52.381 0.00 0.00 31.84 3.85
3600 4431 4.505808 AGCTGAAGATGTGAGTGATCTTG 58.494 43.478 0.00 0.00 39.72 3.02
3690 4548 4.339247 CAGGTTGAACTGGAACACATTTCT 59.661 41.667 0.00 0.00 38.96 2.52
3915 4773 3.447586 TGAGTACTTGGCACTATGTCCTC 59.552 47.826 0.00 0.00 0.00 3.71
3927 4785 5.810587 GCACTATGTCCTCTGTCGATTTTAA 59.189 40.000 0.00 0.00 0.00 1.52
4210 5074 2.783135 GAGAAGTTTGGCATGTCTCCA 58.217 47.619 0.00 0.00 30.60 3.86
4566 5462 1.410517 GGTGCAGCTGATAGAGTGCTA 59.589 52.381 20.43 0.00 36.84 3.49
4665 5561 0.543277 TCATAGACCCTGCCTTGCTG 59.457 55.000 0.00 0.00 0.00 4.41
4883 5779 4.827835 CAGGGAGAACATCGAGAAGGTATA 59.172 45.833 0.00 0.00 0.00 1.47
4884 5780 4.828387 AGGGAGAACATCGAGAAGGTATAC 59.172 45.833 0.00 0.00 0.00 1.47
4885 5781 4.022155 GGGAGAACATCGAGAAGGTATACC 60.022 50.000 14.54 14.54 0.00 2.73
4886 5782 4.583489 GGAGAACATCGAGAAGGTATACCA 59.417 45.833 23.87 2.07 38.89 3.25
4887 5783 5.278561 GGAGAACATCGAGAAGGTATACCAG 60.279 48.000 23.87 9.37 38.89 4.00
4888 5784 4.038162 AGAACATCGAGAAGGTATACCAGC 59.962 45.833 23.87 14.36 38.89 4.85
4889 5785 3.296854 ACATCGAGAAGGTATACCAGCA 58.703 45.455 23.87 1.90 38.89 4.41
4891 5787 4.345257 ACATCGAGAAGGTATACCAGCAAT 59.655 41.667 23.87 6.68 38.89 3.56
4895 5792 6.177610 TCGAGAAGGTATACCAGCAATTTTT 58.822 36.000 23.87 6.58 38.89 1.94
4923 5848 7.750903 GTGAATTGACCTGCAGTATTTAGTTTC 59.249 37.037 13.81 6.03 0.00 2.78
4927 5852 4.010349 ACCTGCAGTATTTAGTTTCCTGC 58.990 43.478 13.81 0.00 46.64 4.85
4935 5860 7.201821 GCAGTATTTAGTTTCCTGCCATACAAT 60.202 37.037 0.00 0.00 42.00 2.71
4936 5861 8.131100 CAGTATTTAGTTTCCTGCCATACAATG 58.869 37.037 0.00 0.00 0.00 2.82
5115 6043 1.079612 CAGGAGTGTGAGCGATGCA 60.080 57.895 0.00 0.00 0.00 3.96
5154 6082 0.538057 CCTTTGCCCAGACTCTGCAA 60.538 55.000 0.00 4.44 42.77 4.08
5160 6088 0.321122 CCCAGACTCTGCAACAGTCC 60.321 60.000 17.92 4.95 41.20 3.85
5303 6231 3.559238 AATTCTCGTTGTTGTGCCATC 57.441 42.857 0.00 0.00 0.00 3.51
5382 6310 8.436046 ACACGGTCAAACTATGTACTTAAAAA 57.564 30.769 0.00 0.00 0.00 1.94
5427 6355 7.554835 TGATATTCGTTACCTGCCAGTTATTTT 59.445 33.333 0.00 0.00 0.00 1.82
5430 6358 5.250200 TCGTTACCTGCCAGTTATTTTCAT 58.750 37.500 0.00 0.00 0.00 2.57
5461 6389 2.274437 TCATCTCTCGTGCTTTGCATC 58.726 47.619 0.00 0.00 41.91 3.91
5462 6390 2.093816 TCATCTCTCGTGCTTTGCATCT 60.094 45.455 0.00 0.00 41.91 2.90
5463 6391 2.001812 TCTCTCGTGCTTTGCATCTC 57.998 50.000 0.00 0.00 41.91 2.75
5464 6392 1.273327 TCTCTCGTGCTTTGCATCTCA 59.727 47.619 0.00 0.00 41.91 3.27
5465 6393 2.093816 TCTCTCGTGCTTTGCATCTCAT 60.094 45.455 0.00 0.00 41.91 2.90
5466 6394 2.004733 TCTCGTGCTTTGCATCTCATG 58.995 47.619 0.00 0.00 41.91 3.07
5467 6395 1.736126 CTCGTGCTTTGCATCTCATGT 59.264 47.619 0.00 0.00 41.91 3.21
5468 6396 2.153645 TCGTGCTTTGCATCTCATGTT 58.846 42.857 0.00 0.00 41.91 2.71
5495 6423 4.130118 TCTTCTGACTTCTCAAACTTGGC 58.870 43.478 0.00 0.00 0.00 4.52
5500 6428 2.213499 ACTTCTCAAACTTGGCTCACG 58.787 47.619 0.00 0.00 0.00 4.35
5515 6443 2.002586 CTCACGTTGGCCTGTATTCAG 58.997 52.381 3.32 0.00 41.01 3.02
5518 6446 1.009829 CGTTGGCCTGTATTCAGCTC 58.990 55.000 3.32 0.00 40.09 4.09
5519 6447 1.675714 CGTTGGCCTGTATTCAGCTCA 60.676 52.381 3.32 0.00 40.09 4.26
5520 6448 1.740025 GTTGGCCTGTATTCAGCTCAC 59.260 52.381 3.32 0.00 40.09 3.51
5521 6449 0.253044 TGGCCTGTATTCAGCTCACC 59.747 55.000 3.32 0.00 40.09 4.02
5522 6450 0.811616 GGCCTGTATTCAGCTCACCG 60.812 60.000 0.00 0.00 40.09 4.94
5524 6452 0.811616 CCTGTATTCAGCTCACCGGC 60.812 60.000 0.00 0.00 40.09 6.13
5526 6454 0.175760 TGTATTCAGCTCACCGGCTC 59.824 55.000 0.00 0.00 41.00 4.70
5527 6455 0.461961 GTATTCAGCTCACCGGCTCT 59.538 55.000 0.00 0.00 41.00 4.09
5528 6456 0.461548 TATTCAGCTCACCGGCTCTG 59.538 55.000 0.00 3.76 41.00 3.35
5529 6457 2.249413 ATTCAGCTCACCGGCTCTGG 62.249 60.000 0.00 0.00 41.00 3.86
5531 6459 3.386237 AGCTCACCGGCTCTGGAC 61.386 66.667 0.00 0.00 38.24 4.02
5569 6504 4.187694 GCTCACACCCTCTAGAAAATCTG 58.812 47.826 0.00 0.00 0.00 2.90
5578 6513 6.071728 ACCCTCTAGAAAATCTGTTGCAAATG 60.072 38.462 0.00 0.00 0.00 2.32
5579 6514 6.327934 CCTCTAGAAAATCTGTTGCAAATGG 58.672 40.000 0.00 0.00 0.00 3.16
5580 6515 6.151648 CCTCTAGAAAATCTGTTGCAAATGGA 59.848 38.462 0.00 0.00 0.00 3.41
5581 6516 7.147949 CCTCTAGAAAATCTGTTGCAAATGGAT 60.148 37.037 0.00 2.39 0.00 3.41
5582 6517 8.125978 TCTAGAAAATCTGTTGCAAATGGATT 57.874 30.769 0.00 8.68 33.57 3.01
5583 6518 8.587608 TCTAGAAAATCTGTTGCAAATGGATTT 58.412 29.630 20.23 20.23 39.59 2.17
5584 6519 9.859427 CTAGAAAATCTGTTGCAAATGGATTTA 57.141 29.630 23.39 14.13 38.18 1.40
5586 6521 9.158233 AGAAAATCTGTTGCAAATGGATTTATG 57.842 29.630 23.39 1.72 38.18 1.90
5587 6522 7.852971 AAATCTGTTGCAAATGGATTTATGG 57.147 32.000 22.55 0.00 37.75 2.74
5588 6523 4.757594 TCTGTTGCAAATGGATTTATGGC 58.242 39.130 0.00 0.00 0.00 4.40
5589 6524 3.871485 TGTTGCAAATGGATTTATGGCC 58.129 40.909 0.00 0.00 0.00 5.36
5590 6525 3.518705 TGTTGCAAATGGATTTATGGCCT 59.481 39.130 3.32 0.00 0.00 5.19
5591 6526 3.823281 TGCAAATGGATTTATGGCCTG 57.177 42.857 3.32 0.00 0.00 4.85
5592 6527 2.435069 TGCAAATGGATTTATGGCCTGG 59.565 45.455 3.32 0.00 0.00 4.45
5593 6528 2.699846 GCAAATGGATTTATGGCCTGGA 59.300 45.455 3.32 0.00 0.00 3.86
5594 6529 3.134442 GCAAATGGATTTATGGCCTGGAA 59.866 43.478 3.32 0.00 0.00 3.53
5595 6530 4.383989 GCAAATGGATTTATGGCCTGGAAA 60.384 41.667 3.32 1.67 0.00 3.13
5596 6531 5.743117 CAAATGGATTTATGGCCTGGAAAA 58.257 37.500 3.32 0.00 0.00 2.29
5597 6532 6.358991 CAAATGGATTTATGGCCTGGAAAAT 58.641 36.000 3.32 4.61 0.00 1.82
5598 6533 6.579850 AATGGATTTATGGCCTGGAAAATT 57.420 33.333 3.32 0.00 0.00 1.82
5599 6534 6.579850 ATGGATTTATGGCCTGGAAAATTT 57.420 33.333 3.32 0.00 0.00 1.82
5600 6535 6.385766 TGGATTTATGGCCTGGAAAATTTT 57.614 33.333 3.32 2.28 0.00 1.82
5601 6536 6.179040 TGGATTTATGGCCTGGAAAATTTTG 58.821 36.000 8.47 0.00 0.00 2.44
5602 6537 5.589855 GGATTTATGGCCTGGAAAATTTTGG 59.410 40.000 8.47 4.79 0.00 3.28
5603 6538 5.574970 TTTATGGCCTGGAAAATTTTGGT 57.425 34.783 8.47 0.00 0.00 3.67
5604 6539 5.574970 TTATGGCCTGGAAAATTTTGGTT 57.425 34.783 8.47 0.00 0.00 3.67
5605 6540 3.205784 TGGCCTGGAAAATTTTGGTTG 57.794 42.857 8.47 0.00 0.00 3.77
5606 6541 2.774234 TGGCCTGGAAAATTTTGGTTGA 59.226 40.909 8.47 0.00 0.00 3.18
5607 6542 3.393941 TGGCCTGGAAAATTTTGGTTGAT 59.606 39.130 8.47 0.00 0.00 2.57
5608 6543 4.594920 TGGCCTGGAAAATTTTGGTTGATA 59.405 37.500 8.47 0.00 0.00 2.15
5609 6544 5.250313 TGGCCTGGAAAATTTTGGTTGATAT 59.750 36.000 8.47 0.00 0.00 1.63
5610 6545 6.179756 GGCCTGGAAAATTTTGGTTGATATT 58.820 36.000 8.47 0.00 0.00 1.28
5611 6546 6.316140 GGCCTGGAAAATTTTGGTTGATATTC 59.684 38.462 8.47 0.00 0.00 1.75
5612 6547 6.035975 GCCTGGAAAATTTTGGTTGATATTCG 59.964 38.462 8.47 0.00 0.00 3.34
5613 6548 7.319646 CCTGGAAAATTTTGGTTGATATTCGA 58.680 34.615 8.47 0.00 0.00 3.71
5614 6549 7.981225 CCTGGAAAATTTTGGTTGATATTCGAT 59.019 33.333 8.47 0.00 0.00 3.59
5615 6550 9.369904 CTGGAAAATTTTGGTTGATATTCGATT 57.630 29.630 8.47 0.00 0.00 3.34
5616 6551 9.149225 TGGAAAATTTTGGTTGATATTCGATTG 57.851 29.630 8.47 0.00 0.00 2.67
5617 6552 8.603181 GGAAAATTTTGGTTGATATTCGATTGG 58.397 33.333 8.47 0.00 0.00 3.16
5618 6553 9.364989 GAAAATTTTGGTTGATATTCGATTGGA 57.635 29.630 8.47 0.00 0.00 3.53
5619 6554 9.889128 AAAATTTTGGTTGATATTCGATTGGAT 57.111 25.926 1.75 0.00 0.00 3.41
5623 6558 6.741992 TGGTTGATATTCGATTGGATATGC 57.258 37.500 0.00 0.00 0.00 3.14
5624 6559 5.351189 TGGTTGATATTCGATTGGATATGCG 59.649 40.000 0.00 0.00 0.00 4.73
5625 6560 5.258622 GTTGATATTCGATTGGATATGCGC 58.741 41.667 0.00 0.00 0.00 6.09
5626 6561 4.502962 TGATATTCGATTGGATATGCGCA 58.497 39.130 14.96 14.96 0.00 6.09
5627 6562 4.934602 TGATATTCGATTGGATATGCGCAA 59.065 37.500 17.11 4.13 0.00 4.85
5628 6563 5.585844 TGATATTCGATTGGATATGCGCAAT 59.414 36.000 17.11 9.69 0.00 3.56
5629 6564 6.760770 TGATATTCGATTGGATATGCGCAATA 59.239 34.615 17.11 8.17 0.00 1.90
5630 6565 7.442062 TGATATTCGATTGGATATGCGCAATAT 59.558 33.333 17.11 13.01 33.94 1.28
5631 6566 4.863152 TCGATTGGATATGCGCAATATG 57.137 40.909 17.11 0.00 31.22 1.78
5632 6567 4.502962 TCGATTGGATATGCGCAATATGA 58.497 39.130 17.11 0.83 31.22 2.15
5633 6568 4.567959 TCGATTGGATATGCGCAATATGAG 59.432 41.667 17.11 0.64 31.22 2.90
5634 6569 4.595116 GATTGGATATGCGCAATATGAGC 58.405 43.478 17.11 0.00 43.64 4.26
5646 6581 4.683832 GCAATATGAGCGGTATAGTAGGG 58.316 47.826 0.00 0.00 0.00 3.53
5647 6582 4.683832 CAATATGAGCGGTATAGTAGGGC 58.316 47.826 0.00 0.00 0.00 5.19
5648 6583 2.304221 ATGAGCGGTATAGTAGGGCA 57.696 50.000 0.00 0.00 0.00 5.36
5649 6584 2.304221 TGAGCGGTATAGTAGGGCAT 57.696 50.000 0.00 0.00 0.00 4.40
5650 6585 2.605257 TGAGCGGTATAGTAGGGCATT 58.395 47.619 0.00 0.00 0.00 3.56
5651 6586 2.969950 TGAGCGGTATAGTAGGGCATTT 59.030 45.455 0.00 0.00 0.00 2.32
5652 6587 4.154176 TGAGCGGTATAGTAGGGCATTTA 58.846 43.478 0.00 0.00 0.00 1.40
5653 6588 4.219944 TGAGCGGTATAGTAGGGCATTTAG 59.780 45.833 0.00 0.00 0.00 1.85
5654 6589 3.514309 AGCGGTATAGTAGGGCATTTAGG 59.486 47.826 0.00 0.00 0.00 2.69
5655 6590 3.260128 GCGGTATAGTAGGGCATTTAGGT 59.740 47.826 0.00 0.00 0.00 3.08
5656 6591 4.262765 GCGGTATAGTAGGGCATTTAGGTT 60.263 45.833 0.00 0.00 0.00 3.50
5657 6592 5.047092 GCGGTATAGTAGGGCATTTAGGTTA 60.047 44.000 0.00 0.00 0.00 2.85
5658 6593 6.393171 CGGTATAGTAGGGCATTTAGGTTAC 58.607 44.000 0.00 0.00 0.00 2.50
5659 6594 6.393171 GGTATAGTAGGGCATTTAGGTTACG 58.607 44.000 0.00 0.00 0.00 3.18
5660 6595 3.832615 AGTAGGGCATTTAGGTTACGG 57.167 47.619 0.00 0.00 0.00 4.02
5661 6596 2.158856 AGTAGGGCATTTAGGTTACGGC 60.159 50.000 0.00 0.00 0.00 5.68
5662 6597 0.463116 AGGGCATTTAGGTTACGGCG 60.463 55.000 4.80 4.80 0.00 6.46
5663 6598 1.354155 GGCATTTAGGTTACGGCGC 59.646 57.895 6.90 0.00 0.00 6.53
5664 6599 1.354155 GCATTTAGGTTACGGCGCC 59.646 57.895 19.07 19.07 0.00 6.53
5665 6600 1.639534 CATTTAGGTTACGGCGCCG 59.360 57.895 44.88 44.88 46.03 6.46
5666 6601 2.175621 ATTTAGGTTACGGCGCCGC 61.176 57.895 46.22 30.60 44.19 6.53
5667 6602 2.582734 ATTTAGGTTACGGCGCCGCT 62.583 55.000 46.22 35.08 44.19 5.52
5668 6603 1.943116 TTTAGGTTACGGCGCCGCTA 61.943 55.000 46.22 33.99 44.19 4.26
5669 6604 2.612219 TTAGGTTACGGCGCCGCTAC 62.612 60.000 46.22 38.85 44.19 3.58
5713 6648 3.688553 GGAGAGCCGTTGGATTAGG 57.311 57.895 0.00 0.00 0.00 2.69
5719 6654 2.780595 CCGTTGGATTAGGCACCTG 58.219 57.895 0.00 0.00 0.00 4.00
5725 6660 0.543749 GGATTAGGCACCTGACAGCT 59.456 55.000 0.00 0.00 0.00 4.24
5728 6663 0.764890 TTAGGCACCTGACAGCTGTT 59.235 50.000 22.65 0.92 0.00 3.16
5739 6674 1.210931 CAGCTGTTGGATGCAACCG 59.789 57.895 25.01 20.22 34.37 4.44
5741 6676 2.629656 GCTGTTGGATGCAACCGCT 61.630 57.895 29.96 0.00 40.51 5.52
5742 6677 1.959085 CTGTTGGATGCAACCGCTT 59.041 52.632 25.01 0.00 39.64 4.68
5743 6678 0.314935 CTGTTGGATGCAACCGCTTT 59.685 50.000 25.01 0.00 39.64 3.51
5744 6679 1.539388 CTGTTGGATGCAACCGCTTTA 59.461 47.619 25.01 6.51 39.64 1.85
5745 6680 1.957177 TGTTGGATGCAACCGCTTTAA 59.043 42.857 25.01 3.91 39.64 1.52
5746 6681 2.287909 TGTTGGATGCAACCGCTTTAAC 60.288 45.455 25.01 7.29 39.64 2.01
5780 6728 2.057137 TTTCCTGCAACAGCTTCAGT 57.943 45.000 0.00 0.00 0.00 3.41
5797 6758 2.571653 TCAGTAACAGAATCCCACCAGG 59.428 50.000 0.00 0.00 0.00 4.45
5799 6760 0.251916 TAACAGAATCCCACCAGGCG 59.748 55.000 0.00 0.00 34.51 5.52
5800 6761 2.825836 CAGAATCCCACCAGGCGC 60.826 66.667 0.00 0.00 34.51 6.53
5802 6763 2.361104 GAATCCCACCAGGCGCAA 60.361 61.111 10.83 0.00 34.51 4.85
5850 6849 1.406860 GGGGGCCTTCAGTGCAAAAA 61.407 55.000 0.84 0.00 0.00 1.94
5853 6852 1.620323 GGGCCTTCAGTGCAAAAATCT 59.380 47.619 0.84 0.00 0.00 2.40
5914 6913 1.729470 ATCCGACGCAGATCGAGCTT 61.729 55.000 0.00 2.26 45.13 3.74
5917 6916 1.518133 GACGCAGATCGAGCTTGCT 60.518 57.895 18.26 0.00 41.67 3.91
5932 6931 4.432741 GCTGGGGGCCACCTCTTC 62.433 72.222 28.32 7.67 38.43 2.87
5942 6941 0.390472 CCACCTCTTCGAGAACAGCC 60.390 60.000 0.00 0.00 0.00 4.85
5955 6960 2.049156 CAGCCGTCGTTCTCAGCA 60.049 61.111 0.00 0.00 0.00 4.41
5958 6963 2.805353 CCGTCGTTCTCAGCACCG 60.805 66.667 0.00 0.00 0.00 4.94
5988 6993 4.821589 GGGCTTCCTCCGTGAGCG 62.822 72.222 0.00 0.00 37.29 5.03
5999 7004 3.967886 CGTGAGCGGGAGTATCATT 57.032 52.632 0.00 0.00 36.25 2.57
6015 7049 9.606631 GGAGTATCATTCTGAAACAACTTCTAT 57.393 33.333 0.00 0.00 36.25 1.98
6034 7068 3.947612 ATCAGATCAAATCAGGGCAGT 57.052 42.857 0.00 0.00 0.00 4.40
6048 7082 0.178990 GGCAGTTGGGTGAGTTTCCT 60.179 55.000 0.00 0.00 0.00 3.36
6149 7355 6.707440 TTCTATTTGTTTCATGTGTGTGGT 57.293 33.333 0.00 0.00 0.00 4.16
6164 7370 6.237901 TGTGTGTGGTAGCTAGAAATTCAAT 58.762 36.000 0.00 0.00 0.00 2.57
6210 7416 1.272212 CAAGGCAAATACCCACACACC 59.728 52.381 0.00 0.00 0.00 4.16
6245 7451 6.128063 GCTATATCTCTGCAAAACATGATCCC 60.128 42.308 0.00 0.00 0.00 3.85
6254 7460 4.142381 GCAAAACATGATCCCCTCTGTTAC 60.142 45.833 0.00 0.00 31.88 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.934507 AGACAAGATAGAAGAAAATTCCTACG 57.065 34.615 0.00 0.00 0.00 3.51
35 36 4.569719 ACGGAGGGAGTACATGATTTTT 57.430 40.909 0.00 0.00 0.00 1.94
36 37 4.019681 TGAACGGAGGGAGTACATGATTTT 60.020 41.667 0.00 0.00 0.00 1.82
37 38 3.517901 TGAACGGAGGGAGTACATGATTT 59.482 43.478 0.00 0.00 0.00 2.17
38 39 3.104512 TGAACGGAGGGAGTACATGATT 58.895 45.455 0.00 0.00 0.00 2.57
39 40 2.431057 GTGAACGGAGGGAGTACATGAT 59.569 50.000 0.00 0.00 0.00 2.45
40 41 1.822990 GTGAACGGAGGGAGTACATGA 59.177 52.381 0.00 0.00 0.00 3.07
41 42 1.825474 AGTGAACGGAGGGAGTACATG 59.175 52.381 0.00 0.00 0.00 3.21
42 43 2.233305 AGTGAACGGAGGGAGTACAT 57.767 50.000 0.00 0.00 0.00 2.29
43 44 2.005370 AAGTGAACGGAGGGAGTACA 57.995 50.000 0.00 0.00 0.00 2.90
44 45 3.064931 CAAAAGTGAACGGAGGGAGTAC 58.935 50.000 0.00 0.00 0.00 2.73
45 46 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
46 47 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
47 48 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
48 49 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
49 50 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
50 51 4.124238 TGACTTACAAAAGTGAACGGAGG 58.876 43.478 0.00 0.00 46.09 4.30
51 52 5.924475 ATGACTTACAAAAGTGAACGGAG 57.076 39.130 0.00 0.00 46.09 4.63
52 53 6.316640 TGAAATGACTTACAAAAGTGAACGGA 59.683 34.615 0.00 0.00 46.09 4.69
53 54 6.491394 TGAAATGACTTACAAAAGTGAACGG 58.509 36.000 0.00 0.00 46.09 4.44
54 55 7.373441 GTCTGAAATGACTTACAAAAGTGAACG 59.627 37.037 0.00 0.00 46.09 3.95
55 56 8.181573 TGTCTGAAATGACTTACAAAAGTGAAC 58.818 33.333 0.00 0.00 46.09 3.18
56 57 8.275015 TGTCTGAAATGACTTACAAAAGTGAA 57.725 30.769 0.00 0.00 46.09 3.18
57 58 7.857734 TGTCTGAAATGACTTACAAAAGTGA 57.142 32.000 0.00 0.00 46.09 3.41
58 59 8.184192 AGTTGTCTGAAATGACTTACAAAAGTG 58.816 33.333 0.00 0.00 46.09 3.16
60 61 8.397906 TGAGTTGTCTGAAATGACTTACAAAAG 58.602 33.333 0.00 0.00 37.79 2.27
61 62 8.275015 TGAGTTGTCTGAAATGACTTACAAAA 57.725 30.769 0.00 0.00 37.79 2.44
62 63 7.857734 TGAGTTGTCTGAAATGACTTACAAA 57.142 32.000 0.00 0.00 37.79 2.83
63 64 7.857734 TTGAGTTGTCTGAAATGACTTACAA 57.142 32.000 0.00 0.00 37.79 2.41
64 65 7.857734 TTTGAGTTGTCTGAAATGACTTACA 57.142 32.000 0.00 0.00 37.79 2.41
67 68 8.571336 CCTATTTTGAGTTGTCTGAAATGACTT 58.429 33.333 0.00 0.00 37.79 3.01
68 69 7.721399 ACCTATTTTGAGTTGTCTGAAATGACT 59.279 33.333 0.00 0.00 37.79 3.41
69 70 7.875971 ACCTATTTTGAGTTGTCTGAAATGAC 58.124 34.615 0.00 0.00 37.47 3.06
70 71 8.352201 CAACCTATTTTGAGTTGTCTGAAATGA 58.648 33.333 0.00 0.00 36.87 2.57
71 72 8.511465 CAACCTATTTTGAGTTGTCTGAAATG 57.489 34.615 0.00 0.00 36.87 2.32
80 81 6.312426 TGTGCAAAACAACCTATTTTGAGTTG 59.688 34.615 13.00 0.00 45.75 3.16
81 82 6.402222 TGTGCAAAACAACCTATTTTGAGTT 58.598 32.000 13.00 0.00 45.75 3.01
82 83 5.971763 TGTGCAAAACAACCTATTTTGAGT 58.028 33.333 13.00 0.00 45.75 3.41
83 84 7.011295 ACAATGTGCAAAACAACCTATTTTGAG 59.989 33.333 13.00 0.44 45.75 3.02
84 85 6.820656 ACAATGTGCAAAACAACCTATTTTGA 59.179 30.769 13.00 0.00 45.75 2.69
85 86 7.014092 ACAATGTGCAAAACAACCTATTTTG 57.986 32.000 5.96 5.96 45.68 2.44
86 87 7.622893 AACAATGTGCAAAACAACCTATTTT 57.377 28.000 0.00 0.00 43.61 1.82
87 88 7.335422 TCAAACAATGTGCAAAACAACCTATTT 59.665 29.630 0.00 0.00 43.61 1.40
88 89 6.820656 TCAAACAATGTGCAAAACAACCTATT 59.179 30.769 0.00 0.00 43.61 1.73
89 90 6.344500 TCAAACAATGTGCAAAACAACCTAT 58.656 32.000 0.00 0.00 43.61 2.57
90 91 5.724328 TCAAACAATGTGCAAAACAACCTA 58.276 33.333 0.00 0.00 43.61 3.08
91 92 4.573900 TCAAACAATGTGCAAAACAACCT 58.426 34.783 0.00 0.00 43.61 3.50
92 93 4.935885 TCAAACAATGTGCAAAACAACC 57.064 36.364 0.00 0.00 43.61 3.77
93 94 9.157259 GATAATTCAAACAATGTGCAAAACAAC 57.843 29.630 0.00 0.00 43.61 3.32
94 95 9.107177 AGATAATTCAAACAATGTGCAAAACAA 57.893 25.926 0.00 0.00 43.61 2.83
95 96 8.659925 AGATAATTCAAACAATGTGCAAAACA 57.340 26.923 0.00 0.00 44.79 2.83
96 97 8.223100 GGAGATAATTCAAACAATGTGCAAAAC 58.777 33.333 0.00 0.00 0.00 2.43
97 98 7.930325 TGGAGATAATTCAAACAATGTGCAAAA 59.070 29.630 0.00 0.00 0.00 2.44
98 99 7.440198 TGGAGATAATTCAAACAATGTGCAAA 58.560 30.769 0.00 0.00 0.00 3.68
99 100 6.990798 TGGAGATAATTCAAACAATGTGCAA 58.009 32.000 0.00 0.00 0.00 4.08
100 101 6.587206 TGGAGATAATTCAAACAATGTGCA 57.413 33.333 0.00 0.00 0.00 4.57
101 102 6.532657 CCTTGGAGATAATTCAAACAATGTGC 59.467 38.462 0.00 0.00 0.00 4.57
102 103 7.605449 ACCTTGGAGATAATTCAAACAATGTG 58.395 34.615 0.00 0.00 0.00 3.21
103 104 7.671398 AGACCTTGGAGATAATTCAAACAATGT 59.329 33.333 0.00 0.00 0.00 2.71
104 105 8.059798 AGACCTTGGAGATAATTCAAACAATG 57.940 34.615 0.00 0.00 0.00 2.82
105 106 7.890127 TGAGACCTTGGAGATAATTCAAACAAT 59.110 33.333 0.00 0.00 0.00 2.71
106 107 7.230747 TGAGACCTTGGAGATAATTCAAACAA 58.769 34.615 0.00 0.00 0.00 2.83
107 108 6.778821 TGAGACCTTGGAGATAATTCAAACA 58.221 36.000 0.00 0.00 0.00 2.83
108 109 7.872113 ATGAGACCTTGGAGATAATTCAAAC 57.128 36.000 0.00 0.00 0.00 2.93
109 110 9.973661 TTTATGAGACCTTGGAGATAATTCAAA 57.026 29.630 0.00 0.00 0.00 2.69
110 111 9.973661 TTTTATGAGACCTTGGAGATAATTCAA 57.026 29.630 0.00 0.00 0.00 2.69
111 112 9.618890 CTTTTATGAGACCTTGGAGATAATTCA 57.381 33.333 0.00 0.00 0.00 2.57
112 113 9.620259 ACTTTTATGAGACCTTGGAGATAATTC 57.380 33.333 0.00 0.00 0.00 2.17
113 114 9.401058 CACTTTTATGAGACCTTGGAGATAATT 57.599 33.333 0.00 0.00 0.00 1.40
114 115 8.772250 TCACTTTTATGAGACCTTGGAGATAAT 58.228 33.333 0.00 0.00 0.00 1.28
115 116 8.146053 TCACTTTTATGAGACCTTGGAGATAA 57.854 34.615 0.00 0.00 0.00 1.75
116 117 7.733773 TCACTTTTATGAGACCTTGGAGATA 57.266 36.000 0.00 0.00 0.00 1.98
117 118 6.627087 TCACTTTTATGAGACCTTGGAGAT 57.373 37.500 0.00 0.00 0.00 2.75
118 119 6.183361 TGTTCACTTTTATGAGACCTTGGAGA 60.183 38.462 0.00 0.00 0.00 3.71
119 120 5.997746 TGTTCACTTTTATGAGACCTTGGAG 59.002 40.000 0.00 0.00 0.00 3.86
120 121 5.935945 TGTTCACTTTTATGAGACCTTGGA 58.064 37.500 0.00 0.00 0.00 3.53
121 122 5.997746 TCTGTTCACTTTTATGAGACCTTGG 59.002 40.000 0.00 0.00 0.00 3.61
122 123 6.148480 CCTCTGTTCACTTTTATGAGACCTTG 59.852 42.308 0.00 0.00 0.00 3.61
123 124 6.234177 CCTCTGTTCACTTTTATGAGACCTT 58.766 40.000 0.00 0.00 0.00 3.50
124 125 5.280215 CCCTCTGTTCACTTTTATGAGACCT 60.280 44.000 0.00 0.00 0.00 3.85
125 126 4.938226 CCCTCTGTTCACTTTTATGAGACC 59.062 45.833 0.00 0.00 0.00 3.85
126 127 5.794894 TCCCTCTGTTCACTTTTATGAGAC 58.205 41.667 0.00 0.00 0.00 3.36
127 128 5.544176 ACTCCCTCTGTTCACTTTTATGAGA 59.456 40.000 0.00 0.00 0.00 3.27
128 129 5.799213 ACTCCCTCTGTTCACTTTTATGAG 58.201 41.667 0.00 0.00 0.00 2.90
129 130 5.825593 ACTCCCTCTGTTCACTTTTATGA 57.174 39.130 0.00 0.00 0.00 2.15
130 131 6.702329 AGTACTCCCTCTGTTCACTTTTATG 58.298 40.000 0.00 0.00 0.00 1.90
131 132 6.726764 AGAGTACTCCCTCTGTTCACTTTTAT 59.273 38.462 19.38 0.00 40.30 1.40
132 133 6.075984 AGAGTACTCCCTCTGTTCACTTTTA 58.924 40.000 19.38 0.00 40.30 1.52
133 134 4.902448 AGAGTACTCCCTCTGTTCACTTTT 59.098 41.667 19.38 0.00 40.30 2.27
134 135 4.484912 AGAGTACTCCCTCTGTTCACTTT 58.515 43.478 19.38 0.00 40.30 2.66
135 136 4.120946 AGAGTACTCCCTCTGTTCACTT 57.879 45.455 19.38 0.00 40.30 3.16
136 137 3.818295 AGAGTACTCCCTCTGTTCACT 57.182 47.619 19.38 0.00 40.30 3.41
139 140 9.316730 CGTATATATAGAGTACTCCCTCTGTTC 57.683 40.741 19.38 4.71 41.81 3.18
140 141 7.769970 GCGTATATATAGAGTACTCCCTCTGTT 59.230 40.741 19.38 1.50 41.81 3.16
141 142 7.274447 GCGTATATATAGAGTACTCCCTCTGT 58.726 42.308 19.38 2.25 41.81 3.41
142 143 6.707161 GGCGTATATATAGAGTACTCCCTCTG 59.293 46.154 19.38 2.50 41.81 3.35
143 144 6.183361 GGGCGTATATATAGAGTACTCCCTCT 60.183 46.154 19.38 3.39 44.00 3.69
144 145 5.997129 GGGCGTATATATAGAGTACTCCCTC 59.003 48.000 19.38 0.00 39.28 4.30
145 146 5.431073 TGGGCGTATATATAGAGTACTCCCT 59.569 44.000 19.38 9.43 41.67 4.20
146 147 5.530543 GTGGGCGTATATATAGAGTACTCCC 59.469 48.000 19.38 9.81 41.55 4.30
147 148 6.118170 TGTGGGCGTATATATAGAGTACTCC 58.882 44.000 19.38 1.81 0.00 3.85
148 149 7.201714 CCTTGTGGGCGTATATATAGAGTACTC 60.202 44.444 15.41 15.41 0.00 2.59
149 150 6.602406 CCTTGTGGGCGTATATATAGAGTACT 59.398 42.308 0.00 0.00 0.00 2.73
198 199 6.683537 TGTAGGAGGATTAGAGAGGAATTGA 58.316 40.000 0.00 0.00 0.00 2.57
249 250 1.506309 AAGACAAGCACATTCGCGCA 61.506 50.000 8.75 0.00 36.85 6.09
253 254 3.003689 AGTTGGAAAGACAAGCACATTCG 59.996 43.478 0.00 0.00 0.00 3.34
261 262 7.388776 TGTTGATGATCTAGTTGGAAAGACAAG 59.611 37.037 0.00 0.00 0.00 3.16
276 277 5.417754 TTTCTCAGCTCTGTTGATGATCT 57.582 39.130 0.00 0.00 31.69 2.75
346 348 7.917003 TGGAGATTAAACAGCCATGCTATATA 58.083 34.615 0.00 0.00 36.40 0.86
353 355 6.458210 AGTTTTTGGAGATTAAACAGCCATG 58.542 36.000 0.00 0.00 34.93 3.66
444 448 0.239879 GTTTACACACACCGCCCATG 59.760 55.000 0.00 0.00 0.00 3.66
448 452 0.733729 TGTTGTTTACACACACCGCC 59.266 50.000 0.00 0.00 30.32 6.13
520 524 9.486497 GGAGTAGCAAATATACCTTTTACTACC 57.514 37.037 0.00 0.00 31.55 3.18
521 525 9.486497 GGGAGTAGCAAATATACCTTTTACTAC 57.514 37.037 0.00 0.00 31.45 2.73
523 527 8.333226 AGGGAGTAGCAAATATACCTTTTACT 57.667 34.615 0.00 0.00 0.00 2.24
541 545 2.425143 ATACGTGAACGGAGGGAGTA 57.575 50.000 7.86 0.00 44.95 2.59
543 547 2.667473 AAATACGTGAACGGAGGGAG 57.333 50.000 7.86 0.00 44.95 4.30
545 549 2.414138 GTCAAAATACGTGAACGGAGGG 59.586 50.000 7.86 0.00 44.95 4.30
546 550 3.061322 TGTCAAAATACGTGAACGGAGG 58.939 45.455 7.86 0.00 44.95 4.30
547 551 3.739300 AGTGTCAAAATACGTGAACGGAG 59.261 43.478 7.86 0.00 44.95 4.63
549 553 4.682860 ACTAGTGTCAAAATACGTGAACGG 59.317 41.667 7.86 0.00 44.95 4.44
550 554 5.174398 ACACTAGTGTCAAAATACGTGAACG 59.826 40.000 22.95 0.40 40.24 3.95
552 556 7.380333 CAGTACACTAGTGTCAAAATACGTGAA 59.620 37.037 31.11 6.98 43.74 3.18
554 558 6.859508 TCAGTACACTAGTGTCAAAATACGTG 59.140 38.462 31.11 19.33 43.74 4.49
555 559 6.973843 TCAGTACACTAGTGTCAAAATACGT 58.026 36.000 31.11 10.25 43.74 3.57
556 560 7.862741 TTCAGTACACTAGTGTCAAAATACG 57.137 36.000 31.11 17.18 43.74 3.06
557 561 8.584600 CGATTCAGTACACTAGTGTCAAAATAC 58.415 37.037 31.11 21.52 43.74 1.89
558 562 8.517056 TCGATTCAGTACACTAGTGTCAAAATA 58.483 33.333 31.11 10.81 43.74 1.40
560 564 6.741109 TCGATTCAGTACACTAGTGTCAAAA 58.259 36.000 31.11 20.12 43.74 2.44
562 566 5.704053 TCTCGATTCAGTACACTAGTGTCAA 59.296 40.000 31.11 19.00 43.74 3.18
563 567 5.243207 TCTCGATTCAGTACACTAGTGTCA 58.757 41.667 31.11 15.13 43.74 3.58
564 568 5.798015 TCTCGATTCAGTACACTAGTGTC 57.202 43.478 31.11 21.22 43.74 3.67
566 570 6.260271 TGGTATCTCGATTCAGTACACTAGTG 59.740 42.308 21.44 21.44 0.00 2.74
567 571 6.354938 TGGTATCTCGATTCAGTACACTAGT 58.645 40.000 0.00 0.00 0.00 2.57
568 572 6.862711 TGGTATCTCGATTCAGTACACTAG 57.137 41.667 0.00 0.00 0.00 2.57
569 573 7.415989 GGTTTGGTATCTCGATTCAGTACACTA 60.416 40.741 0.00 0.00 0.00 2.74
570 574 6.331061 GTTTGGTATCTCGATTCAGTACACT 58.669 40.000 0.00 0.00 0.00 3.55
571 575 5.519206 GGTTTGGTATCTCGATTCAGTACAC 59.481 44.000 0.00 0.00 0.00 2.90
572 576 5.394883 GGGTTTGGTATCTCGATTCAGTACA 60.395 44.000 0.00 0.00 0.00 2.90
573 577 5.048507 GGGTTTGGTATCTCGATTCAGTAC 58.951 45.833 0.00 0.00 0.00 2.73
606 889 2.036089 GGGATGGAAGATGGTCTCGTAC 59.964 54.545 0.00 0.00 0.00 3.67
614 897 1.072159 GGCTCGGGATGGAAGATGG 59.928 63.158 0.00 0.00 0.00 3.51
649 933 4.522789 TCCTCGAATTGAAAAAGAAAGGGG 59.477 41.667 0.00 0.00 0.00 4.79
681 965 2.226437 GTGTGTGTATGGCTTGTCCTTG 59.774 50.000 0.00 0.00 35.26 3.61
740 1030 1.449778 GGTTCTACAAGGGCTCCGC 60.450 63.158 0.00 0.00 0.00 5.54
802 1092 2.433664 GCGGGAGTTGTACACGGG 60.434 66.667 0.00 0.00 0.00 5.28
1173 1510 0.614979 TGGGGGACTTCTTCCTCTCG 60.615 60.000 0.00 0.00 45.81 4.04
1177 1514 1.489560 CGGTTGGGGGACTTCTTCCT 61.490 60.000 0.00 0.00 45.09 3.36
1309 1646 0.108186 ATGAATCGCGCAGGAACAGA 60.108 50.000 8.75 0.00 0.00 3.41
1343 1680 4.094590 CCAACTCAGCACTCAGATTTCATC 59.905 45.833 0.00 0.00 0.00 2.92
1344 1681 4.008330 CCAACTCAGCACTCAGATTTCAT 58.992 43.478 0.00 0.00 0.00 2.57
1413 1751 0.179100 CGGTACCATGAGCTCACCAG 60.179 60.000 20.97 13.10 0.00 4.00
1482 1820 5.451242 CCAGAGCTTACAGGACAGATTAGAC 60.451 48.000 0.00 0.00 0.00 2.59
1525 1863 1.740296 CCTAAATATCCGCGGCCCG 60.740 63.158 23.51 0.00 0.00 6.13
1597 1935 3.655777 ACCCAGAACCCTGTTGAATCTAA 59.344 43.478 0.00 0.00 38.74 2.10
1610 1948 5.469479 CAAATATGTTTGTGACCCAGAACC 58.531 41.667 6.76 0.00 39.85 3.62
1636 2098 0.626916 CCCGACCCTTAAATCCCCAA 59.373 55.000 0.00 0.00 0.00 4.12
1715 2178 2.872028 GCAGTGTTGCGGAACAAAG 58.128 52.632 24.60 19.24 43.77 2.77
1825 2315 5.250200 CCAAGTGCCCACAGTTATTAACTA 58.750 41.667 8.71 0.00 40.46 2.24
1853 2343 7.829706 AGGGTACATGAGAAAGATAAGGTTTTC 59.170 37.037 0.00 0.00 34.34 2.29
1878 2382 8.519526 TGTGCTTTGGTATTGTTAAGGAAATAG 58.480 33.333 0.00 0.00 0.00 1.73
1879 2383 8.410673 TGTGCTTTGGTATTGTTAAGGAAATA 57.589 30.769 0.00 0.00 0.00 1.40
1880 2384 7.296628 TGTGCTTTGGTATTGTTAAGGAAAT 57.703 32.000 0.00 0.00 0.00 2.17
1881 2385 6.716934 TGTGCTTTGGTATTGTTAAGGAAA 57.283 33.333 0.00 0.00 0.00 3.13
1882 2386 6.716934 TTGTGCTTTGGTATTGTTAAGGAA 57.283 33.333 0.00 0.00 0.00 3.36
1883 2387 6.266558 ACATTGTGCTTTGGTATTGTTAAGGA 59.733 34.615 0.00 0.00 0.00 3.36
1884 2388 6.454795 ACATTGTGCTTTGGTATTGTTAAGG 58.545 36.000 0.00 0.00 0.00 2.69
1885 2389 9.638239 ATTACATTGTGCTTTGGTATTGTTAAG 57.362 29.630 0.00 0.00 0.00 1.85
1886 2390 9.988815 AATTACATTGTGCTTTGGTATTGTTAA 57.011 25.926 0.00 0.00 0.00 2.01
2054 2694 9.784531 CCACAGATAAAGGATACATAATTCAGT 57.215 33.333 0.00 0.00 41.41 3.41
2090 2733 9.696917 AAGGTTGCATACTTCAAGAAAAATAAG 57.303 29.630 0.00 0.00 0.00 1.73
2283 2938 2.142356 ATTTCACATCGGGGCATTGA 57.858 45.000 0.00 0.00 0.00 2.57
2292 2947 1.257936 CGCTTCCCGTATTTCACATCG 59.742 52.381 0.00 0.00 0.00 3.84
2501 3159 7.175119 AGTTTCACTTAAATAAGTCAAGAGGGC 59.825 37.037 2.88 0.00 44.19 5.19
2528 3186 9.131791 ACTCCACTCATAAACAAAGTTGTAAAT 57.868 29.630 0.00 0.00 41.31 1.40
2604 3269 6.116126 AGACTTGGGAAATCAGCAGTTATAC 58.884 40.000 0.00 0.00 0.00 1.47
2662 3470 6.308766 GCAATCTAACTTAAATGTGGCACAAG 59.691 38.462 25.95 19.14 44.16 3.16
2663 3471 6.015519 AGCAATCTAACTTAAATGTGGCACAA 60.016 34.615 25.95 5.23 44.16 3.33
2667 3475 4.800471 GCAGCAATCTAACTTAAATGTGGC 59.200 41.667 0.00 0.00 0.00 5.01
2670 3478 8.244113 GGTTTAGCAGCAATCTAACTTAAATGT 58.756 33.333 0.00 0.00 0.00 2.71
2671 3479 8.462016 AGGTTTAGCAGCAATCTAACTTAAATG 58.538 33.333 0.00 0.00 0.00 2.32
2674 3482 7.996098 AAGGTTTAGCAGCAATCTAACTTAA 57.004 32.000 0.00 0.00 0.00 1.85
2675 3483 7.996098 AAAGGTTTAGCAGCAATCTAACTTA 57.004 32.000 0.00 0.00 0.00 2.24
2676 3484 6.901081 AAAGGTTTAGCAGCAATCTAACTT 57.099 33.333 0.00 0.00 0.00 2.66
2678 3486 9.129209 CTTAAAAAGGTTTAGCAGCAATCTAAC 57.871 33.333 0.00 0.00 30.92 2.34
2679 3487 9.073475 TCTTAAAAAGGTTTAGCAGCAATCTAA 57.927 29.630 0.00 0.00 30.92 2.10
2680 3488 8.630054 TCTTAAAAAGGTTTAGCAGCAATCTA 57.370 30.769 0.00 0.00 30.92 1.98
2681 3489 7.524717 TCTTAAAAAGGTTTAGCAGCAATCT 57.475 32.000 0.00 0.00 30.92 2.40
2682 3490 8.763049 ATTCTTAAAAAGGTTTAGCAGCAATC 57.237 30.769 0.00 0.00 30.92 2.67
2683 3491 7.819415 GGATTCTTAAAAAGGTTTAGCAGCAAT 59.181 33.333 0.00 0.00 30.92 3.56
2684 3492 7.015195 AGGATTCTTAAAAAGGTTTAGCAGCAA 59.985 33.333 0.00 0.00 30.92 3.91
2685 3493 6.493458 AGGATTCTTAAAAAGGTTTAGCAGCA 59.507 34.615 0.00 0.00 30.92 4.41
2686 3494 6.925211 AGGATTCTTAAAAAGGTTTAGCAGC 58.075 36.000 0.00 0.00 30.92 5.25
2687 3495 7.814587 CCAAGGATTCTTAAAAAGGTTTAGCAG 59.185 37.037 0.00 0.00 30.92 4.24
2698 3506 7.234577 ACAAAGGCATACCAAGGATTCTTAAAA 59.765 33.333 0.00 0.00 39.06 1.52
2700 3508 6.252995 ACAAAGGCATACCAAGGATTCTTAA 58.747 36.000 0.00 0.00 39.06 1.85
2744 3552 9.998106 ACTAAGTAAAGAAAGCAGATTGTAGAA 57.002 29.630 0.00 0.00 0.00 2.10
2786 3617 8.376203 CACAAGACGAAGACAATATTAGTGAAG 58.624 37.037 0.00 0.00 0.00 3.02
2873 3704 0.830648 CGCTTCTCATTCCACCCCTA 59.169 55.000 0.00 0.00 0.00 3.53
2891 3722 6.528423 CAGTCTCTATAACTTTGAACTCCACG 59.472 42.308 0.00 0.00 0.00 4.94
3197 4028 4.261072 CCATTGATCAGGAAGAAGAATGCG 60.261 45.833 0.00 0.00 31.95 4.73
3209 4040 2.148446 TTTCTGGGCCATTGATCAGG 57.852 50.000 6.72 0.00 0.00 3.86
3473 4304 3.118956 ACCTACCAAATCTTCTGAGAGCG 60.119 47.826 0.00 0.00 34.85 5.03
3600 4431 8.343366 ACGAGAAAAGTTAAAAGATGAAGAACC 58.657 33.333 0.00 0.00 0.00 3.62
3982 4843 5.534654 TGGGAACTTCAACAACCTGATTAAG 59.465 40.000 0.00 0.00 0.00 1.85
3984 4845 5.055265 TGGGAACTTCAACAACCTGATTA 57.945 39.130 0.00 0.00 0.00 1.75
4103 4967 5.163447 ACACAAGTTACAGCTAGAACACAGA 60.163 40.000 11.37 0.00 0.00 3.41
4210 5074 5.256474 CCATAGAACAGAACACCTTTGGAT 58.744 41.667 0.00 0.00 32.00 3.41
4566 5462 4.225942 TCCATCTCAGTCAATAGCTGGTTT 59.774 41.667 0.00 0.00 32.14 3.27
4575 5471 3.137728 TCATGCCATCCATCTCAGTCAAT 59.862 43.478 0.00 0.00 29.71 2.57
4576 5472 2.506644 TCATGCCATCCATCTCAGTCAA 59.493 45.455 0.00 0.00 29.71 3.18
4665 5561 2.932130 GATCAAGACGCCCTGGCCTC 62.932 65.000 3.32 0.56 37.98 4.70
4827 5723 0.675633 AAGCACGCTGGCAAATTTCT 59.324 45.000 0.00 0.00 35.83 2.52
4895 5792 6.714810 ACTAAATACTGCAGGTCAATTCACAA 59.285 34.615 19.93 0.00 0.00 3.33
4935 5860 5.302360 ACAACGAGTATAAAAACAGAGCCA 58.698 37.500 0.00 0.00 0.00 4.75
4936 5861 5.638234 AGACAACGAGTATAAAAACAGAGCC 59.362 40.000 0.00 0.00 0.00 4.70
4937 5862 6.707599 AGACAACGAGTATAAAAACAGAGC 57.292 37.500 0.00 0.00 0.00 4.09
5022 5950 1.866269 TCCACCTCATCCTCCTCCATA 59.134 52.381 0.00 0.00 0.00 2.74
5115 6043 0.537188 CCTGGTACTTGCGGATGTCT 59.463 55.000 0.00 0.00 0.00 3.41
5229 6157 1.678970 AGCGGATGCAAAAGGGTCC 60.679 57.895 0.00 0.00 46.23 4.46
5303 6231 2.667473 AGGAAATCACGGGTAAGTCG 57.333 50.000 0.00 0.00 0.00 4.18
5383 6311 8.896744 CGAATATCAGTGCATCCCAATAATAAT 58.103 33.333 0.00 0.00 0.00 1.28
5427 6355 7.199078 CACGAGAGATGAAAAGATACAGATGA 58.801 38.462 0.00 0.00 0.00 2.92
5430 6358 5.126222 AGCACGAGAGATGAAAAGATACAGA 59.874 40.000 0.00 0.00 0.00 3.41
5461 6389 5.469421 AGAAGTCAGAAGAGCAAAACATGAG 59.531 40.000 0.00 0.00 0.00 2.90
5462 6390 5.371526 AGAAGTCAGAAGAGCAAAACATGA 58.628 37.500 0.00 0.00 0.00 3.07
5463 6391 5.237996 TGAGAAGTCAGAAGAGCAAAACATG 59.762 40.000 0.00 0.00 0.00 3.21
5464 6392 5.371526 TGAGAAGTCAGAAGAGCAAAACAT 58.628 37.500 0.00 0.00 0.00 2.71
5465 6393 4.769688 TGAGAAGTCAGAAGAGCAAAACA 58.230 39.130 0.00 0.00 0.00 2.83
5466 6394 5.741388 TTGAGAAGTCAGAAGAGCAAAAC 57.259 39.130 0.00 0.00 32.98 2.43
5467 6395 5.882557 AGTTTGAGAAGTCAGAAGAGCAAAA 59.117 36.000 0.00 0.00 32.98 2.44
5468 6396 5.431765 AGTTTGAGAAGTCAGAAGAGCAAA 58.568 37.500 0.00 0.00 32.98 3.68
5495 6423 2.002586 CTGAATACAGGCCAACGTGAG 58.997 52.381 5.01 0.00 40.14 3.51
5500 6428 1.740025 GTGAGCTGAATACAGGCCAAC 59.260 52.381 5.01 0.00 43.62 3.77
5515 6443 2.010582 CTAGTCCAGAGCCGGTGAGC 62.011 65.000 1.90 0.00 0.00 4.26
5518 6446 2.111162 CTCTAGTCCAGAGCCGGTG 58.889 63.158 1.90 0.00 44.34 4.94
5519 6447 4.668151 CTCTAGTCCAGAGCCGGT 57.332 61.111 1.90 0.00 44.34 5.28
5526 6454 2.613977 CCACCAAACTGCTCTAGTCCAG 60.614 54.545 9.75 9.75 39.18 3.86
5527 6455 1.347707 CCACCAAACTGCTCTAGTCCA 59.652 52.381 0.00 0.00 39.18 4.02
5528 6456 1.946283 GCCACCAAACTGCTCTAGTCC 60.946 57.143 0.00 0.00 39.18 3.85
5529 6457 1.002544 AGCCACCAAACTGCTCTAGTC 59.997 52.381 0.00 0.00 39.18 2.59
5531 6459 1.731720 GAGCCACCAAACTGCTCTAG 58.268 55.000 3.61 0.00 46.19 2.43
5554 6489 5.964958 TTTGCAACAGATTTTCTAGAGGG 57.035 39.130 0.00 0.00 0.00 4.30
5558 6493 8.767478 AAATCCATTTGCAACAGATTTTCTAG 57.233 30.769 18.16 0.00 34.37 2.43
5569 6504 3.872771 CAGGCCATAAATCCATTTGCAAC 59.127 43.478 5.01 0.00 0.00 4.17
5578 6513 5.589855 CCAAAATTTTCCAGGCCATAAATCC 59.410 40.000 5.01 0.00 0.00 3.01
5579 6514 6.179756 ACCAAAATTTTCCAGGCCATAAATC 58.820 36.000 5.01 0.00 0.00 2.17
5580 6515 6.138391 ACCAAAATTTTCCAGGCCATAAAT 57.862 33.333 5.01 1.94 0.00 1.40
5581 6516 5.574970 ACCAAAATTTTCCAGGCCATAAA 57.425 34.783 5.01 0.00 0.00 1.40
5582 6517 5.072329 TCAACCAAAATTTTCCAGGCCATAA 59.928 36.000 5.01 0.00 0.00 1.90
5583 6518 4.594920 TCAACCAAAATTTTCCAGGCCATA 59.405 37.500 5.01 0.00 0.00 2.74
5584 6519 3.393941 TCAACCAAAATTTTCCAGGCCAT 59.606 39.130 5.01 0.00 0.00 4.40
5585 6520 2.774234 TCAACCAAAATTTTCCAGGCCA 59.226 40.909 5.01 0.00 0.00 5.36
5586 6521 3.483808 TCAACCAAAATTTTCCAGGCC 57.516 42.857 0.00 0.00 0.00 5.19
5587 6522 6.035975 CGAATATCAACCAAAATTTTCCAGGC 59.964 38.462 0.00 0.00 0.00 4.85
5588 6523 7.319646 TCGAATATCAACCAAAATTTTCCAGG 58.680 34.615 0.00 2.34 0.00 4.45
5589 6524 8.931385 ATCGAATATCAACCAAAATTTTCCAG 57.069 30.769 0.00 0.00 0.00 3.86
5590 6525 9.149225 CAATCGAATATCAACCAAAATTTTCCA 57.851 29.630 0.00 0.00 0.00 3.53
5591 6526 8.603181 CCAATCGAATATCAACCAAAATTTTCC 58.397 33.333 0.00 0.00 0.00 3.13
5592 6527 9.364989 TCCAATCGAATATCAACCAAAATTTTC 57.635 29.630 0.00 0.00 0.00 2.29
5593 6528 9.889128 ATCCAATCGAATATCAACCAAAATTTT 57.111 25.926 0.00 0.00 0.00 1.82
5597 6532 8.081633 GCATATCCAATCGAATATCAACCAAAA 58.918 33.333 0.00 0.00 0.00 2.44
5598 6533 7.572910 CGCATATCCAATCGAATATCAACCAAA 60.573 37.037 0.00 0.00 0.00 3.28
5599 6534 6.128309 CGCATATCCAATCGAATATCAACCAA 60.128 38.462 0.00 0.00 0.00 3.67
5600 6535 5.351189 CGCATATCCAATCGAATATCAACCA 59.649 40.000 0.00 0.00 0.00 3.67
5601 6536 5.727791 GCGCATATCCAATCGAATATCAACC 60.728 44.000 0.30 0.00 0.00 3.77
5602 6537 5.163864 TGCGCATATCCAATCGAATATCAAC 60.164 40.000 5.66 0.00 0.00 3.18
5603 6538 4.934602 TGCGCATATCCAATCGAATATCAA 59.065 37.500 5.66 0.00 0.00 2.57
5604 6539 4.502962 TGCGCATATCCAATCGAATATCA 58.497 39.130 5.66 0.00 0.00 2.15
5605 6540 5.469373 TTGCGCATATCCAATCGAATATC 57.531 39.130 12.75 0.00 0.00 1.63
5606 6541 7.442062 TCATATTGCGCATATCCAATCGAATAT 59.558 33.333 12.75 3.82 33.93 1.28
5607 6542 6.760770 TCATATTGCGCATATCCAATCGAATA 59.239 34.615 12.75 1.12 33.93 1.75
5608 6543 5.585844 TCATATTGCGCATATCCAATCGAAT 59.414 36.000 12.75 0.00 33.93 3.34
5609 6544 4.934602 TCATATTGCGCATATCCAATCGAA 59.065 37.500 12.75 0.00 33.93 3.71
5610 6545 4.502962 TCATATTGCGCATATCCAATCGA 58.497 39.130 12.75 0.00 33.93 3.59
5611 6546 4.784394 GCTCATATTGCGCATATCCAATCG 60.784 45.833 12.75 0.00 33.93 3.34
5612 6547 4.595116 GCTCATATTGCGCATATCCAATC 58.405 43.478 12.75 0.00 33.93 2.67
5613 6548 3.064408 CGCTCATATTGCGCATATCCAAT 59.936 43.478 12.75 2.41 46.72 3.16
5614 6549 2.416202 CGCTCATATTGCGCATATCCAA 59.584 45.455 12.75 0.00 46.72 3.53
5615 6550 2.001872 CGCTCATATTGCGCATATCCA 58.998 47.619 12.75 0.00 46.72 3.41
5616 6551 2.726555 CGCTCATATTGCGCATATCC 57.273 50.000 12.75 0.00 46.72 2.59
5624 6559 4.683832 CCCTACTATACCGCTCATATTGC 58.316 47.826 0.00 0.00 0.00 3.56
5625 6560 4.159693 TGCCCTACTATACCGCTCATATTG 59.840 45.833 0.00 0.00 0.00 1.90
5626 6561 4.350245 TGCCCTACTATACCGCTCATATT 58.650 43.478 0.00 0.00 0.00 1.28
5627 6562 3.977312 TGCCCTACTATACCGCTCATAT 58.023 45.455 0.00 0.00 0.00 1.78
5628 6563 3.444792 TGCCCTACTATACCGCTCATA 57.555 47.619 0.00 0.00 0.00 2.15
5629 6564 2.304221 TGCCCTACTATACCGCTCAT 57.696 50.000 0.00 0.00 0.00 2.90
5630 6565 2.304221 ATGCCCTACTATACCGCTCA 57.696 50.000 0.00 0.00 0.00 4.26
5631 6566 3.679824 AAATGCCCTACTATACCGCTC 57.320 47.619 0.00 0.00 0.00 5.03
5632 6567 3.514309 CCTAAATGCCCTACTATACCGCT 59.486 47.826 0.00 0.00 0.00 5.52
5633 6568 3.260128 ACCTAAATGCCCTACTATACCGC 59.740 47.826 0.00 0.00 0.00 5.68
5634 6569 5.479124 AACCTAAATGCCCTACTATACCG 57.521 43.478 0.00 0.00 0.00 4.02
5635 6570 6.393171 CGTAACCTAAATGCCCTACTATACC 58.607 44.000 0.00 0.00 0.00 2.73
5636 6571 6.393171 CCGTAACCTAAATGCCCTACTATAC 58.607 44.000 0.00 0.00 0.00 1.47
5637 6572 5.047092 GCCGTAACCTAAATGCCCTACTATA 60.047 44.000 0.00 0.00 0.00 1.31
5638 6573 4.262765 GCCGTAACCTAAATGCCCTACTAT 60.263 45.833 0.00 0.00 0.00 2.12
5639 6574 3.070015 GCCGTAACCTAAATGCCCTACTA 59.930 47.826 0.00 0.00 0.00 1.82
5640 6575 2.158856 GCCGTAACCTAAATGCCCTACT 60.159 50.000 0.00 0.00 0.00 2.57
5641 6576 2.216046 GCCGTAACCTAAATGCCCTAC 58.784 52.381 0.00 0.00 0.00 3.18
5642 6577 1.202557 CGCCGTAACCTAAATGCCCTA 60.203 52.381 0.00 0.00 0.00 3.53
5643 6578 0.463116 CGCCGTAACCTAAATGCCCT 60.463 55.000 0.00 0.00 0.00 5.19
5644 6579 2.019337 CGCCGTAACCTAAATGCCC 58.981 57.895 0.00 0.00 0.00 5.36
5645 6580 1.354155 GCGCCGTAACCTAAATGCC 59.646 57.895 0.00 0.00 0.00 4.40
5646 6581 1.354155 GGCGCCGTAACCTAAATGC 59.646 57.895 12.58 0.00 0.00 3.56
5647 6582 1.639534 CGGCGCCGTAACCTAAATG 59.360 57.895 39.71 8.03 34.35 2.32
5648 6583 2.175621 GCGGCGCCGTAACCTAAAT 61.176 57.895 45.02 0.00 42.09 1.40
5649 6584 1.943116 TAGCGGCGCCGTAACCTAAA 61.943 55.000 45.02 19.95 42.09 1.85
5650 6585 2.413963 TAGCGGCGCCGTAACCTAA 61.414 57.895 45.02 22.27 42.09 2.69
5651 6586 2.828095 TAGCGGCGCCGTAACCTA 60.828 61.111 45.02 33.85 42.09 3.08
5652 6587 4.503314 GTAGCGGCGCCGTAACCT 62.503 66.667 45.02 34.90 42.09 3.50
5680 6615 4.147449 TCCGAGCACATCCGCCAG 62.147 66.667 0.00 0.00 0.00 4.85
5681 6616 4.147449 CTCCGAGCACATCCGCCA 62.147 66.667 0.00 0.00 0.00 5.69
5682 6617 3.781770 CTCTCCGAGCACATCCGCC 62.782 68.421 0.00 0.00 0.00 6.13
5683 6618 2.279120 CTCTCCGAGCACATCCGC 60.279 66.667 0.00 0.00 0.00 5.54
5713 6648 0.607489 ATCCAACAGCTGTCAGGTGC 60.607 55.000 27.78 3.15 46.94 5.01
5728 6663 1.539388 CAGTTAAAGCGGTTGCATCCA 59.461 47.619 14.13 0.00 46.23 3.41
5739 6674 2.165319 ACGACCTGGTCAGTTAAAGC 57.835 50.000 25.42 0.00 32.09 3.51
5741 6676 5.702209 GGAAATAACGACCTGGTCAGTTAAA 59.298 40.000 29.63 19.74 36.27 1.52
5742 6677 5.012354 AGGAAATAACGACCTGGTCAGTTAA 59.988 40.000 29.63 20.38 36.27 2.01
5743 6678 4.529377 AGGAAATAACGACCTGGTCAGTTA 59.471 41.667 28.85 28.85 36.68 2.24
5744 6679 3.326880 AGGAAATAACGACCTGGTCAGTT 59.673 43.478 27.32 27.32 35.17 3.16
5745 6680 2.904434 AGGAAATAACGACCTGGTCAGT 59.096 45.455 25.42 19.90 32.39 3.41
5746 6681 3.262420 CAGGAAATAACGACCTGGTCAG 58.738 50.000 25.42 19.31 44.96 3.51
5780 6728 0.251916 CGCCTGGTGGGATTCTGTTA 59.748 55.000 0.00 0.00 37.23 2.41
5797 6758 3.747976 AATTGGGCGGAGTTGCGC 61.748 61.111 9.62 9.62 46.92 6.09
5799 6760 2.125952 GCAATTGGGCGGAGTTGC 60.126 61.111 7.72 0.74 39.94 4.17
5800 6761 1.213537 CAGCAATTGGGCGGAGTTG 59.786 57.895 7.72 0.00 39.27 3.16
5802 6763 3.064324 GCAGCAATTGGGCGGAGT 61.064 61.111 7.72 0.00 39.27 3.85
5850 6849 0.388907 GCGCCATGTTGTTGCAAGAT 60.389 50.000 0.00 0.00 0.00 2.40
5853 6852 1.591059 GTGCGCCATGTTGTTGCAA 60.591 52.632 4.18 0.00 37.30 4.08
5881 6880 2.281345 GGATCCCAGCATCTGCCG 60.281 66.667 0.00 0.00 43.38 5.69
5917 6916 4.649705 TCGAAGAGGTGGCCCCCA 62.650 66.667 7.14 0.00 0.00 4.96
5932 6931 3.449042 GAACGACGGCTGTTCTCG 58.551 61.111 15.67 0.93 41.89 4.04
5942 6941 2.081212 GTCGGTGCTGAGAACGACG 61.081 63.158 6.71 0.00 44.76 5.12
5983 6988 2.666317 TCAGAATGATACTCCCGCTCA 58.334 47.619 0.00 0.00 42.56 4.26
5999 7004 9.730705 ATTTGATCTGATAGAAGTTGTTTCAGA 57.269 29.630 20.25 20.25 44.83 3.27
6015 7049 3.349927 CAACTGCCCTGATTTGATCTGA 58.650 45.455 0.00 0.00 0.00 3.27
6034 7068 2.104792 CAGAGTCAGGAAACTCACCCAA 59.895 50.000 6.79 0.00 46.65 4.12
6062 7096 2.036475 AGAGACTCGCAAGTGTTCATGT 59.964 45.455 0.00 0.00 45.24 3.21
6075 7109 3.857549 TCCATGAGTTTCAGAGACTCG 57.142 47.619 14.74 3.51 45.05 4.18
6077 7111 4.349342 AGGTTTCCATGAGTTTCAGAGACT 59.651 41.667 0.00 0.00 0.00 3.24
6138 7344 5.643348 TGAATTTCTAGCTACCACACACATG 59.357 40.000 0.00 0.00 0.00 3.21
6164 7370 4.460731 TCCACTCACACACATGAAACAAAA 59.539 37.500 0.00 0.00 0.00 2.44
6210 7416 3.493877 GCAGAGATATAGCAAGCACACAG 59.506 47.826 0.00 0.00 0.00 3.66
6223 7429 5.075493 GGGGATCATGTTTTGCAGAGATAT 58.925 41.667 0.00 0.00 0.00 1.63
6245 7451 9.449719 AGGTTGATAAATAACAAGTAACAGAGG 57.550 33.333 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.