Multiple sequence alignment - TraesCS4D01G265100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G265100 chr4D 100.000 2567 0 0 1 2567 435232732 435230166 0.000000e+00 4741.0
1 TraesCS4D01G265100 chr4D 84.230 818 86 24 779 1574 435411348 435410552 0.000000e+00 756.0
2 TraesCS4D01G265100 chr4A 92.946 1120 45 8 512 1621 36671881 36670786 0.000000e+00 1600.0
3 TraesCS4D01G265100 chr4A 88.388 577 55 6 1010 1574 36795347 36794771 0.000000e+00 684.0
4 TraesCS4D01G265100 chr4A 89.434 265 22 2 2303 2561 36669563 36669299 1.900000e-86 329.0
5 TraesCS4D01G265100 chr4B 91.971 959 56 13 702 1650 535747033 535747980 0.000000e+00 1325.0
6 TraesCS4D01G265100 chr4B 89.465 579 58 2 999 1574 536412572 536411994 0.000000e+00 728.0
7 TraesCS4D01G265100 chr4B 88.475 564 62 1 1010 1570 535715714 535716277 0.000000e+00 678.0
8 TraesCS4D01G265100 chr4B 88.475 564 62 1 1010 1570 535728700 535729263 0.000000e+00 678.0
9 TraesCS4D01G265100 chr4B 85.034 441 43 18 254 675 535721373 535721809 6.560000e-116 427.0
10 TraesCS4D01G265100 chr4B 84.977 426 50 9 1880 2297 536089053 536089472 1.100000e-113 420.0
11 TraesCS4D01G265100 chr4B 84.340 447 35 21 254 675 535734357 535734793 3.080000e-109 405.0
12 TraesCS4D01G265100 chr4B 86.142 267 35 2 2303 2567 536102476 536102742 1.160000e-73 287.0
13 TraesCS4D01G265100 chr4B 86.093 151 20 1 1676 1825 277582527 277582677 7.350000e-36 161.0
14 TraesCS4D01G265100 chr4B 85.714 119 17 0 120 238 65594562 65594680 2.680000e-25 126.0
15 TraesCS4D01G265100 chr1B 90.041 241 13 7 1 240 513429518 513429288 4.150000e-78 302.0
16 TraesCS4D01G265100 chr1B 86.777 121 16 0 120 240 440744432 440744312 4.460000e-28 135.0
17 TraesCS4D01G265100 chr1B 84.000 75 11 1 392 465 93451276 93451202 1.270000e-08 71.3
18 TraesCS4D01G265100 chr7B 89.583 240 14 7 1 239 681751762 681751533 6.950000e-76 294.0
19 TraesCS4D01G265100 chr7B 89.583 240 14 7 1 239 681781155 681780926 6.950000e-76 294.0
20 TraesCS4D01G265100 chr7B 77.703 148 28 5 12 158 633861476 633861619 4.550000e-13 86.1
21 TraesCS4D01G265100 chr7B 85.294 68 9 1 399 465 272068938 272068871 4.580000e-08 69.4
22 TraesCS4D01G265100 chrUn 86.842 228 22 2 25 244 89036158 89036385 5.480000e-62 248.0
23 TraesCS4D01G265100 chr5B 84.459 148 21 2 1 147 460657769 460657915 7.400000e-31 145.0
24 TraesCS4D01G265100 chr5B 76.871 147 32 2 1679 1825 407123422 407123278 5.890000e-12 82.4
25 TraesCS4D01G265100 chr1A 83.766 154 21 3 6 158 471466640 471466790 2.660000e-30 143.0
26 TraesCS4D01G265100 chr1A 86.765 68 8 1 399 465 579210139 579210072 9.850000e-10 75.0
27 TraesCS4D01G265100 chr5D 82.803 157 26 1 1679 1835 517343064 517342909 3.440000e-29 139.0
28 TraesCS4D01G265100 chr7A 84.783 138 17 4 103 239 157601950 157602084 4.460000e-28 135.0
29 TraesCS4D01G265100 chr7A 86.667 120 16 0 120 239 62730541 62730660 1.600000e-27 134.0
30 TraesCS4D01G265100 chr6B 82.781 151 24 2 1676 1825 533596305 533596156 1.600000e-27 134.0
31 TraesCS4D01G265100 chr2A 84.173 139 20 2 120 257 475141523 475141660 1.600000e-27 134.0
32 TraesCS4D01G265100 chr2B 86.765 68 8 1 399 465 93628586 93628519 9.850000e-10 75.0
33 TraesCS4D01G265100 chr6A 85.294 68 9 1 399 465 151509281 151509214 4.580000e-08 69.4
34 TraesCS4D01G265100 chr6A 85.294 68 9 1 399 465 556036406 556036339 4.580000e-08 69.4
35 TraesCS4D01G265100 chr2D 84.507 71 10 1 396 465 62155780 62155850 4.580000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G265100 chr4D 435230166 435232732 2566 True 4741.0 4741 100.000 1 2567 1 chr4D.!!$R1 2566
1 TraesCS4D01G265100 chr4D 435410552 435411348 796 True 756.0 756 84.230 779 1574 1 chr4D.!!$R2 795
2 TraesCS4D01G265100 chr4A 36669299 36671881 2582 True 964.5 1600 91.190 512 2561 2 chr4A.!!$R2 2049
3 TraesCS4D01G265100 chr4A 36794771 36795347 576 True 684.0 684 88.388 1010 1574 1 chr4A.!!$R1 564
4 TraesCS4D01G265100 chr4B 535747033 535747980 947 False 1325.0 1325 91.971 702 1650 1 chr4B.!!$F7 948
5 TraesCS4D01G265100 chr4B 536411994 536412572 578 True 728.0 728 89.465 999 1574 1 chr4B.!!$R1 575
6 TraesCS4D01G265100 chr4B 535715714 535716277 563 False 678.0 678 88.475 1010 1570 1 chr4B.!!$F3 560
7 TraesCS4D01G265100 chr4B 535728700 535729263 563 False 678.0 678 88.475 1010 1570 1 chr4B.!!$F5 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.03918 TTGGCTGAGACGAGGGACTA 59.961 55.0 0.0 0.0 41.55 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1721 1919 0.321298 TCGAACTTAAGTGGGCTGGC 60.321 55.0 9.34 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.961294 ATGATGAATAGGAGAGAGAACTTTTG 57.039 34.615 0.00 0.00 0.00 2.44
26 27 6.820656 TGATGAATAGGAGAGAGAACTTTTGC 59.179 38.462 0.00 0.00 0.00 3.68
27 28 5.491982 TGAATAGGAGAGAGAACTTTTGCC 58.508 41.667 0.00 0.00 0.00 4.52
28 29 5.013079 TGAATAGGAGAGAGAACTTTTGCCA 59.987 40.000 0.00 0.00 0.00 4.92
29 30 3.133141 AGGAGAGAGAACTTTTGCCAC 57.867 47.619 0.00 0.00 0.00 5.01
30 31 1.801178 GGAGAGAGAACTTTTGCCACG 59.199 52.381 0.00 0.00 0.00 4.94
31 32 2.484889 GAGAGAGAACTTTTGCCACGT 58.515 47.619 0.00 0.00 0.00 4.49
32 33 2.476997 GAGAGAGAACTTTTGCCACGTC 59.523 50.000 0.00 0.00 0.00 4.34
33 34 2.158957 AGAGAGAACTTTTGCCACGTCA 60.159 45.455 0.00 0.00 0.00 4.35
34 35 2.213499 AGAGAACTTTTGCCACGTCAG 58.787 47.619 0.00 0.00 0.00 3.51
35 36 0.663153 AGAACTTTTGCCACGTCAGC 59.337 50.000 0.04 0.04 0.00 4.26
36 37 0.657368 GAACTTTTGCCACGTCAGCG 60.657 55.000 2.87 0.00 44.93 5.18
37 38 1.092921 AACTTTTGCCACGTCAGCGA 61.093 50.000 2.87 0.00 42.00 4.93
38 39 1.092921 ACTTTTGCCACGTCAGCGAA 61.093 50.000 5.79 5.79 42.00 4.70
39 40 0.384725 CTTTTGCCACGTCAGCGAAG 60.385 55.000 9.18 8.52 42.00 3.79
40 41 0.812014 TTTTGCCACGTCAGCGAAGA 60.812 50.000 9.18 0.91 42.00 2.87
41 42 1.495584 TTTGCCACGTCAGCGAAGAC 61.496 55.000 5.79 0.00 42.00 3.01
42 43 3.112709 GCCACGTCAGCGAAGACC 61.113 66.667 0.00 0.00 42.00 3.85
43 44 2.805353 CCACGTCAGCGAAGACCG 60.805 66.667 0.00 0.00 42.00 4.79
44 45 2.805353 CACGTCAGCGAAGACCGG 60.805 66.667 0.00 0.00 42.00 5.28
52 53 1.572941 GCGAAGACCGGTCAAAACC 59.427 57.895 35.00 17.32 42.66 3.27
62 63 2.750301 GGTCAAAACCGTGTTGAGTC 57.250 50.000 4.25 0.00 35.71 3.36
63 64 2.011222 GGTCAAAACCGTGTTGAGTCA 58.989 47.619 4.25 0.00 35.71 3.41
64 65 2.031683 GGTCAAAACCGTGTTGAGTCAG 59.968 50.000 4.25 0.00 35.71 3.51
65 66 1.668751 TCAAAACCGTGTTGAGTCAGC 59.331 47.619 0.00 0.00 31.45 4.26
66 67 1.400142 CAAAACCGTGTTGAGTCAGCA 59.600 47.619 5.45 5.45 0.00 4.41
67 68 1.967319 AAACCGTGTTGAGTCAGCAT 58.033 45.000 13.12 0.00 0.00 3.79
68 69 1.512926 AACCGTGTTGAGTCAGCATC 58.487 50.000 13.12 6.27 0.00 3.91
69 70 0.392706 ACCGTGTTGAGTCAGCATCA 59.607 50.000 13.12 0.00 0.00 3.07
70 71 1.073964 CCGTGTTGAGTCAGCATCAG 58.926 55.000 13.12 7.80 0.00 2.90
71 72 1.606480 CCGTGTTGAGTCAGCATCAGT 60.606 52.381 13.12 0.00 0.00 3.41
72 73 2.352715 CCGTGTTGAGTCAGCATCAGTA 60.353 50.000 13.12 0.00 0.00 2.74
73 74 2.663602 CGTGTTGAGTCAGCATCAGTAC 59.336 50.000 13.12 0.00 0.00 2.73
74 75 3.612717 CGTGTTGAGTCAGCATCAGTACT 60.613 47.826 13.12 0.00 0.00 2.73
75 76 3.677121 GTGTTGAGTCAGCATCAGTACTG 59.323 47.826 17.17 17.17 35.15 2.74
76 77 3.257393 GTTGAGTCAGCATCAGTACTGG 58.743 50.000 22.48 8.81 34.57 4.00
77 78 1.205655 TGAGTCAGCATCAGTACTGGC 59.794 52.381 22.48 18.01 38.82 4.85
78 79 1.566211 AGTCAGCATCAGTACTGGCT 58.434 50.000 22.48 19.90 43.82 4.75
79 80 1.905215 AGTCAGCATCAGTACTGGCTT 59.095 47.619 22.48 6.96 46.37 4.35
80 81 2.005451 GTCAGCATCAGTACTGGCTTG 58.995 52.381 22.48 17.30 35.62 4.01
81 82 1.065926 TCAGCATCAGTACTGGCTTGG 60.066 52.381 22.48 12.63 33.60 3.61
82 83 0.393537 AGCATCAGTACTGGCTTGGC 60.394 55.000 22.48 17.13 31.34 4.52
83 84 0.393537 GCATCAGTACTGGCTTGGCT 60.394 55.000 22.48 0.00 0.00 4.75
84 85 1.376543 CATCAGTACTGGCTTGGCTG 58.623 55.000 22.48 5.83 0.00 4.85
85 86 1.065926 CATCAGTACTGGCTTGGCTGA 60.066 52.381 22.48 0.45 39.98 4.26
86 87 0.610174 TCAGTACTGGCTTGGCTGAG 59.390 55.000 22.48 0.00 33.05 3.35
87 88 0.610174 CAGTACTGGCTTGGCTGAGA 59.390 55.000 15.49 0.00 0.00 3.27
88 89 0.610687 AGTACTGGCTTGGCTGAGAC 59.389 55.000 0.00 5.70 0.00 3.36
89 90 0.737715 GTACTGGCTTGGCTGAGACG 60.738 60.000 7.94 0.00 0.00 4.18
90 91 0.898326 TACTGGCTTGGCTGAGACGA 60.898 55.000 7.94 0.00 0.00 4.20
91 92 1.447489 CTGGCTTGGCTGAGACGAG 60.447 63.158 0.00 0.00 0.00 4.18
92 93 2.125350 GGCTTGGCTGAGACGAGG 60.125 66.667 4.39 0.00 0.00 4.63
93 94 2.125350 GCTTGGCTGAGACGAGGG 60.125 66.667 4.39 0.00 0.00 4.30
94 95 2.650116 GCTTGGCTGAGACGAGGGA 61.650 63.158 4.39 0.00 0.00 4.20
95 96 1.216710 CTTGGCTGAGACGAGGGAC 59.783 63.158 0.00 0.00 0.00 4.46
97 98 0.039180 TTGGCTGAGACGAGGGACTA 59.961 55.000 0.00 0.00 41.55 2.59
98 99 0.039180 TGGCTGAGACGAGGGACTAA 59.961 55.000 0.00 0.00 41.55 2.24
99 100 1.183549 GGCTGAGACGAGGGACTAAA 58.816 55.000 0.00 0.00 41.55 1.85
100 101 1.135053 GGCTGAGACGAGGGACTAAAC 60.135 57.143 0.00 0.00 41.55 2.01
101 102 1.819903 GCTGAGACGAGGGACTAAACT 59.180 52.381 0.00 0.00 41.55 2.66
102 103 2.231721 GCTGAGACGAGGGACTAAACTT 59.768 50.000 0.00 0.00 41.55 2.66
103 104 3.442977 GCTGAGACGAGGGACTAAACTTA 59.557 47.826 0.00 0.00 41.55 2.24
104 105 4.674885 GCTGAGACGAGGGACTAAACTTAC 60.675 50.000 0.00 0.00 41.55 2.34
105 106 4.660168 TGAGACGAGGGACTAAACTTACT 58.340 43.478 0.00 0.00 41.55 2.24
106 107 4.699257 TGAGACGAGGGACTAAACTTACTC 59.301 45.833 0.00 0.00 41.55 2.59
108 109 3.417690 CGAGGGACTAAACTTACTCGG 57.582 52.381 0.00 0.00 41.55 4.63
109 110 2.751806 CGAGGGACTAAACTTACTCGGT 59.248 50.000 0.00 0.00 41.55 4.69
110 111 3.192212 CGAGGGACTAAACTTACTCGGTT 59.808 47.826 0.00 0.00 41.55 4.44
111 112 4.321527 CGAGGGACTAAACTTACTCGGTTT 60.322 45.833 0.00 0.00 41.55 3.27
112 113 4.891260 AGGGACTAAACTTACTCGGTTTG 58.109 43.478 0.00 0.00 36.02 2.93
113 114 4.590222 AGGGACTAAACTTACTCGGTTTGA 59.410 41.667 0.00 0.00 36.02 2.69
114 115 5.070847 AGGGACTAAACTTACTCGGTTTGAA 59.929 40.000 0.00 0.00 36.02 2.69
115 116 5.407691 GGGACTAAACTTACTCGGTTTGAAG 59.592 44.000 0.00 0.00 37.45 3.02
116 117 6.218746 GGACTAAACTTACTCGGTTTGAAGA 58.781 40.000 0.00 0.00 37.45 2.87
117 118 6.365518 GGACTAAACTTACTCGGTTTGAAGAG 59.634 42.308 0.00 0.00 37.45 2.85
119 120 7.270779 ACTAAACTTACTCGGTTTGAAGAGTT 58.729 34.615 3.37 0.00 44.46 3.01
120 121 5.986004 AACTTACTCGGTTTGAAGAGTTG 57.014 39.130 3.37 1.19 44.46 3.16
121 122 5.272283 ACTTACTCGGTTTGAAGAGTTGA 57.728 39.130 3.37 0.00 44.46 3.18
122 123 5.290386 ACTTACTCGGTTTGAAGAGTTGAG 58.710 41.667 3.37 5.56 44.46 3.02
123 124 3.113260 ACTCGGTTTGAAGAGTTGAGG 57.887 47.619 0.00 0.00 44.46 3.86
124 125 2.224305 ACTCGGTTTGAAGAGTTGAGGG 60.224 50.000 0.00 0.00 44.46 4.30
125 126 2.037251 CTCGGTTTGAAGAGTTGAGGGA 59.963 50.000 0.00 0.00 0.00 4.20
126 127 2.143925 CGGTTTGAAGAGTTGAGGGAC 58.856 52.381 0.00 0.00 0.00 4.46
128 129 3.006537 CGGTTTGAAGAGTTGAGGGACTA 59.993 47.826 0.00 0.00 41.55 2.59
129 130 4.502604 CGGTTTGAAGAGTTGAGGGACTAA 60.503 45.833 0.00 0.00 41.55 2.24
130 131 5.374071 GGTTTGAAGAGTTGAGGGACTAAA 58.626 41.667 0.00 0.00 41.55 1.85
138 139 3.593096 GTTGAGGGACTAAACTTACCCG 58.407 50.000 0.00 0.00 46.14 5.28
139 140 2.181975 TGAGGGACTAAACTTACCCGG 58.818 52.381 0.00 0.00 46.13 5.73
140 141 2.182827 GAGGGACTAAACTTACCCGGT 58.817 52.381 0.00 0.00 46.13 5.28
141 142 2.568956 GAGGGACTAAACTTACCCGGTT 59.431 50.000 0.00 0.00 46.13 4.44
142 143 2.981784 AGGGACTAAACTTACCCGGTTT 59.018 45.455 0.00 0.00 46.13 3.27
143 144 3.076621 GGGACTAAACTTACCCGGTTTG 58.923 50.000 0.00 0.00 37.45 2.93
144 145 3.244526 GGGACTAAACTTACCCGGTTTGA 60.245 47.826 0.00 0.00 37.45 2.69
145 146 4.388485 GGACTAAACTTACCCGGTTTGAA 58.612 43.478 0.00 0.00 37.45 2.69
146 147 4.453478 GGACTAAACTTACCCGGTTTGAAG 59.547 45.833 0.00 0.00 37.45 3.02
147 148 5.294734 ACTAAACTTACCCGGTTTGAAGA 57.705 39.130 0.00 0.00 37.45 2.87
148 149 5.303165 ACTAAACTTACCCGGTTTGAAGAG 58.697 41.667 0.00 0.00 37.45 2.85
149 150 3.851458 AACTTACCCGGTTTGAAGAGT 57.149 42.857 0.00 0.00 0.00 3.24
150 151 3.851458 ACTTACCCGGTTTGAAGAGTT 57.149 42.857 0.00 0.00 0.00 3.01
151 152 3.473625 ACTTACCCGGTTTGAAGAGTTG 58.526 45.455 0.00 0.00 0.00 3.16
152 153 3.135167 ACTTACCCGGTTTGAAGAGTTGA 59.865 43.478 0.00 0.00 0.00 3.18
153 154 2.256117 ACCCGGTTTGAAGAGTTGAG 57.744 50.000 0.00 0.00 0.00 3.02
154 155 1.202770 ACCCGGTTTGAAGAGTTGAGG 60.203 52.381 0.00 0.00 0.00 3.86
155 156 1.523758 CCGGTTTGAAGAGTTGAGGG 58.476 55.000 0.00 0.00 0.00 4.30
156 157 1.071699 CCGGTTTGAAGAGTTGAGGGA 59.928 52.381 0.00 0.00 0.00 4.20
157 158 2.143925 CGGTTTGAAGAGTTGAGGGAC 58.856 52.381 0.00 0.00 0.00 4.46
159 160 3.006537 CGGTTTGAAGAGTTGAGGGACTA 59.993 47.826 0.00 0.00 41.55 2.59
160 161 4.502604 CGGTTTGAAGAGTTGAGGGACTAA 60.503 45.833 0.00 0.00 41.55 2.24
161 162 4.998033 GGTTTGAAGAGTTGAGGGACTAAG 59.002 45.833 0.00 0.00 41.55 2.18
162 163 5.454897 GGTTTGAAGAGTTGAGGGACTAAGT 60.455 44.000 0.00 0.00 41.55 2.24
163 164 6.239515 GGTTTGAAGAGTTGAGGGACTAAGTA 60.240 42.308 0.00 0.00 41.55 2.24
164 165 7.387643 GTTTGAAGAGTTGAGGGACTAAGTAT 58.612 38.462 0.00 0.00 41.55 2.12
165 166 7.554959 TTGAAGAGTTGAGGGACTAAGTATT 57.445 36.000 0.00 0.00 41.55 1.89
166 167 6.936279 TGAAGAGTTGAGGGACTAAGTATTG 58.064 40.000 0.00 0.00 41.55 1.90
167 168 5.346181 AGAGTTGAGGGACTAAGTATTGC 57.654 43.478 0.00 0.00 41.55 3.56
168 169 4.162509 AGAGTTGAGGGACTAAGTATTGCC 59.837 45.833 0.00 0.00 41.55 4.52
169 170 3.118738 AGTTGAGGGACTAAGTATTGCCG 60.119 47.826 0.00 0.00 41.55 5.69
170 171 1.760613 TGAGGGACTAAGTATTGCCGG 59.239 52.381 0.00 0.00 41.55 6.13
171 172 1.761198 GAGGGACTAAGTATTGCCGGT 59.239 52.381 1.90 0.00 41.55 5.28
172 173 2.169978 GAGGGACTAAGTATTGCCGGTT 59.830 50.000 1.90 0.00 41.55 4.44
173 174 2.574824 AGGGACTAAGTATTGCCGGTTT 59.425 45.455 1.90 0.00 36.02 3.27
174 175 3.009805 AGGGACTAAGTATTGCCGGTTTT 59.990 43.478 1.90 0.00 36.02 2.43
175 176 4.225717 AGGGACTAAGTATTGCCGGTTTTA 59.774 41.667 1.90 0.00 36.02 1.52
176 177 4.943093 GGGACTAAGTATTGCCGGTTTTAA 59.057 41.667 1.90 0.00 0.00 1.52
177 178 5.415389 GGGACTAAGTATTGCCGGTTTTAAA 59.585 40.000 1.90 0.00 0.00 1.52
178 179 6.403964 GGGACTAAGTATTGCCGGTTTTAAAG 60.404 42.308 1.90 0.00 0.00 1.85
179 180 6.149973 GGACTAAGTATTGCCGGTTTTAAAGT 59.850 38.462 1.90 0.00 0.00 2.66
180 181 7.308770 GGACTAAGTATTGCCGGTTTTAAAGTT 60.309 37.037 1.90 0.00 0.00 2.66
181 182 8.620116 ACTAAGTATTGCCGGTTTTAAAGTTA 57.380 30.769 1.90 0.00 0.00 2.24
182 183 9.065798 ACTAAGTATTGCCGGTTTTAAAGTTAA 57.934 29.630 1.90 0.00 0.00 2.01
183 184 9.550811 CTAAGTATTGCCGGTTTTAAAGTTAAG 57.449 33.333 1.90 0.00 0.00 1.85
184 185 6.916440 AGTATTGCCGGTTTTAAAGTTAAGG 58.084 36.000 1.90 0.00 0.00 2.69
185 186 4.587584 TTGCCGGTTTTAAAGTTAAGGG 57.412 40.909 1.90 0.00 0.00 3.95
186 187 3.830121 TGCCGGTTTTAAAGTTAAGGGA 58.170 40.909 1.90 0.00 0.00 4.20
187 188 3.569277 TGCCGGTTTTAAAGTTAAGGGAC 59.431 43.478 1.90 0.00 0.00 4.46
189 190 5.003160 GCCGGTTTTAAAGTTAAGGGACTA 58.997 41.667 1.90 0.00 38.49 2.59
190 191 5.473162 GCCGGTTTTAAAGTTAAGGGACTAA 59.527 40.000 1.90 0.00 38.49 2.24
191 192 6.016360 GCCGGTTTTAAAGTTAAGGGACTAAA 60.016 38.462 1.90 0.00 38.49 1.85
192 193 7.309377 GCCGGTTTTAAAGTTAAGGGACTAAAT 60.309 37.037 1.90 0.00 38.49 1.40
193 194 8.239314 CCGGTTTTAAAGTTAAGGGACTAAATC 58.761 37.037 0.00 0.00 38.49 2.17
194 195 9.006839 CGGTTTTAAAGTTAAGGGACTAAATCT 57.993 33.333 0.00 0.00 38.49 2.40
203 204 9.433153 AGTTAAGGGACTAAATCTAAACTTTCG 57.567 33.333 0.00 0.00 38.49 3.46
204 205 9.428097 GTTAAGGGACTAAATCTAAACTTTCGA 57.572 33.333 0.00 0.00 38.49 3.71
206 207 8.913487 AAGGGACTAAATCTAAACTTTCGAAA 57.087 30.769 10.71 10.71 38.49 3.46
207 208 8.549338 AGGGACTAAATCTAAACTTTCGAAAG 57.451 34.615 31.29 31.29 38.53 2.62
208 209 8.373220 AGGGACTAAATCTAAACTTTCGAAAGA 58.627 33.333 37.54 20.03 36.71 2.52
209 210 8.657729 GGGACTAAATCTAAACTTTCGAAAGAG 58.342 37.037 37.54 25.96 43.69 2.85
210 211 9.205719 GGACTAAATCTAAACTTTCGAAAGAGT 57.794 33.333 37.54 26.86 43.69 3.24
215 216 7.659652 ATCTAAACTTTCGAAAGAGTTGAGG 57.340 36.000 37.54 23.03 43.69 3.86
216 217 5.989777 TCTAAACTTTCGAAAGAGTTGAGGG 59.010 40.000 37.54 21.32 43.69 4.30
217 218 4.417426 AACTTTCGAAAGAGTTGAGGGA 57.583 40.909 37.54 1.20 43.69 4.20
218 219 3.729966 ACTTTCGAAAGAGTTGAGGGAC 58.270 45.455 37.54 0.00 43.69 4.46
219 220 2.433868 TTCGAAAGAGTTGAGGGACG 57.566 50.000 0.00 0.00 43.69 4.79
220 221 1.612676 TCGAAAGAGTTGAGGGACGA 58.387 50.000 0.00 0.00 34.84 4.20
221 222 1.958579 TCGAAAGAGTTGAGGGACGAA 59.041 47.619 0.00 0.00 34.84 3.85
222 223 2.363038 TCGAAAGAGTTGAGGGACGAAA 59.637 45.455 0.00 0.00 34.84 3.46
223 224 3.128349 CGAAAGAGTTGAGGGACGAAAA 58.872 45.455 0.00 0.00 0.00 2.29
224 225 3.558418 CGAAAGAGTTGAGGGACGAAAAA 59.442 43.478 0.00 0.00 0.00 1.94
225 226 4.213482 CGAAAGAGTTGAGGGACGAAAAAT 59.787 41.667 0.00 0.00 0.00 1.82
226 227 5.407387 CGAAAGAGTTGAGGGACGAAAAATA 59.593 40.000 0.00 0.00 0.00 1.40
227 228 6.092259 CGAAAGAGTTGAGGGACGAAAAATAT 59.908 38.462 0.00 0.00 0.00 1.28
228 229 7.277098 CGAAAGAGTTGAGGGACGAAAAATATA 59.723 37.037 0.00 0.00 0.00 0.86
229 230 7.845066 AAGAGTTGAGGGACGAAAAATATAC 57.155 36.000 0.00 0.00 0.00 1.47
230 231 7.184067 AGAGTTGAGGGACGAAAAATATACT 57.816 36.000 0.00 0.00 0.00 2.12
231 232 7.621796 AGAGTTGAGGGACGAAAAATATACTT 58.378 34.615 0.00 0.00 0.00 2.24
232 233 8.101419 AGAGTTGAGGGACGAAAAATATACTTT 58.899 33.333 0.00 0.00 0.00 2.66
233 234 8.631480 AGTTGAGGGACGAAAAATATACTTTT 57.369 30.769 0.00 0.00 0.00 2.27
234 235 9.074576 AGTTGAGGGACGAAAAATATACTTTTT 57.925 29.630 0.00 0.48 34.64 1.94
235 236 9.338291 GTTGAGGGACGAAAAATATACTTTTTC 57.662 33.333 15.69 15.69 42.10 2.29
236 237 8.047413 TGAGGGACGAAAAATATACTTTTTCC 57.953 34.615 17.78 11.61 42.38 3.13
237 238 7.886446 TGAGGGACGAAAAATATACTTTTTCCT 59.114 33.333 17.78 12.04 42.38 3.36
238 239 8.645814 AGGGACGAAAAATATACTTTTTCCTT 57.354 30.769 17.78 7.66 42.38 3.36
239 240 9.085645 AGGGACGAAAAATATACTTTTTCCTTT 57.914 29.630 17.78 9.45 42.38 3.11
240 241 9.701098 GGGACGAAAAATATACTTTTTCCTTTT 57.299 29.630 17.78 1.30 42.38 2.27
270 271 9.929180 TGTATTATTCATAAGGTGTAGATGAGC 57.071 33.333 0.00 0.00 31.50 4.26
273 274 4.837896 TCATAAGGTGTAGATGAGCTCG 57.162 45.455 9.64 0.00 0.00 5.03
274 275 3.570125 TCATAAGGTGTAGATGAGCTCGG 59.430 47.826 9.64 0.00 0.00 4.63
275 276 1.115467 AAGGTGTAGATGAGCTCGGG 58.885 55.000 9.64 0.00 0.00 5.14
276 277 0.259065 AGGTGTAGATGAGCTCGGGA 59.741 55.000 9.64 0.00 0.00 5.14
277 278 1.112113 GGTGTAGATGAGCTCGGGAA 58.888 55.000 9.64 0.00 0.00 3.97
278 279 1.202428 GGTGTAGATGAGCTCGGGAAC 60.202 57.143 9.64 5.73 0.00 3.62
302 303 6.648725 CGAATCGGATATTTGGTTATCTCC 57.351 41.667 0.00 0.00 0.00 3.71
303 304 6.398918 CGAATCGGATATTTGGTTATCTCCT 58.601 40.000 0.00 0.00 0.00 3.69
304 305 6.311445 CGAATCGGATATTTGGTTATCTCCTG 59.689 42.308 0.00 0.00 0.00 3.86
305 306 6.688073 ATCGGATATTTGGTTATCTCCTGT 57.312 37.500 0.00 0.00 0.00 4.00
306 307 6.097915 TCGGATATTTGGTTATCTCCTGTC 57.902 41.667 0.00 0.00 0.00 3.51
307 308 5.011738 TCGGATATTTGGTTATCTCCTGTCC 59.988 44.000 0.00 0.00 0.00 4.02
308 309 5.561679 GGATATTTGGTTATCTCCTGTCCC 58.438 45.833 0.00 0.00 0.00 4.46
309 310 5.310857 GGATATTTGGTTATCTCCTGTCCCT 59.689 44.000 0.00 0.00 0.00 4.20
310 311 6.183361 GGATATTTGGTTATCTCCTGTCCCTT 60.183 42.308 0.00 0.00 0.00 3.95
311 312 4.569719 TTTGGTTATCTCCTGTCCCTTC 57.430 45.455 0.00 0.00 0.00 3.46
312 313 3.491766 TGGTTATCTCCTGTCCCTTCT 57.508 47.619 0.00 0.00 0.00 2.85
313 314 3.803340 TGGTTATCTCCTGTCCCTTCTT 58.197 45.455 0.00 0.00 0.00 2.52
314 315 4.955335 TGGTTATCTCCTGTCCCTTCTTA 58.045 43.478 0.00 0.00 0.00 2.10
315 316 4.715297 TGGTTATCTCCTGTCCCTTCTTAC 59.285 45.833 0.00 0.00 0.00 2.34
316 317 4.963628 GGTTATCTCCTGTCCCTTCTTACT 59.036 45.833 0.00 0.00 0.00 2.24
317 318 6.134754 GGTTATCTCCTGTCCCTTCTTACTA 58.865 44.000 0.00 0.00 0.00 1.82
318 319 6.610425 GGTTATCTCCTGTCCCTTCTTACTAA 59.390 42.308 0.00 0.00 0.00 2.24
319 320 7.290481 GGTTATCTCCTGTCCCTTCTTACTAAT 59.710 40.741 0.00 0.00 0.00 1.73
320 321 9.364653 GTTATCTCCTGTCCCTTCTTACTAATA 57.635 37.037 0.00 0.00 0.00 0.98
324 325 9.947189 TCTCCTGTCCCTTCTTACTAATATTAA 57.053 33.333 0.00 0.00 0.00 1.40
350 351 9.726438 ATGAGTTAAATGAGTAACTTGTTAGCT 57.274 29.630 0.00 0.00 42.94 3.32
351 352 9.204570 TGAGTTAAATGAGTAACTTGTTAGCTC 57.795 33.333 0.00 12.08 42.94 4.09
352 353 8.240883 AGTTAAATGAGTAACTTGTTAGCTCG 57.759 34.615 0.00 0.00 40.63 5.03
353 354 8.086522 AGTTAAATGAGTAACTTGTTAGCTCGA 58.913 33.333 0.00 0.00 40.63 4.04
354 355 6.952935 AAATGAGTAACTTGTTAGCTCGAG 57.047 37.500 8.45 8.45 0.00 4.04
355 356 5.646577 ATGAGTAACTTGTTAGCTCGAGT 57.353 39.130 15.13 3.51 33.93 4.18
356 357 5.044428 TGAGTAACTTGTTAGCTCGAGTC 57.956 43.478 15.13 6.52 31.59 3.36
357 358 4.517832 TGAGTAACTTGTTAGCTCGAGTCA 59.482 41.667 15.13 6.02 31.59 3.41
358 359 5.183331 TGAGTAACTTGTTAGCTCGAGTCAT 59.817 40.000 15.13 3.22 31.59 3.06
359 360 6.026947 AGTAACTTGTTAGCTCGAGTCATT 57.973 37.500 15.13 0.32 31.59 2.57
360 361 7.094506 TGAGTAACTTGTTAGCTCGAGTCATTA 60.095 37.037 15.13 0.00 31.59 1.90
361 362 7.600065 AGTAACTTGTTAGCTCGAGTCATTAA 58.400 34.615 15.13 5.63 31.59 1.40
362 363 6.952935 AACTTGTTAGCTCGAGTCATTAAG 57.047 37.500 15.13 14.90 31.59 1.85
363 364 4.865365 ACTTGTTAGCTCGAGTCATTAAGC 59.135 41.667 15.13 0.00 34.95 3.09
364 365 4.720649 TGTTAGCTCGAGTCATTAAGCT 57.279 40.909 15.13 5.51 46.35 3.74
365 366 5.073311 TGTTAGCTCGAGTCATTAAGCTT 57.927 39.130 15.13 3.48 42.23 3.74
366 367 6.203808 TGTTAGCTCGAGTCATTAAGCTTA 57.796 37.500 15.13 0.86 42.23 3.09
367 368 6.806751 TGTTAGCTCGAGTCATTAAGCTTAT 58.193 36.000 15.13 0.00 42.23 1.73
368 369 7.265673 TGTTAGCTCGAGTCATTAAGCTTATT 58.734 34.615 15.13 0.48 42.23 1.40
369 370 7.764443 TGTTAGCTCGAGTCATTAAGCTTATTT 59.236 33.333 15.13 0.00 42.23 1.40
370 371 8.604890 GTTAGCTCGAGTCATTAAGCTTATTTT 58.395 33.333 15.13 0.00 42.23 1.82
371 372 7.009568 AGCTCGAGTCATTAAGCTTATTTTG 57.990 36.000 15.13 6.17 42.23 2.44
372 373 6.595716 AGCTCGAGTCATTAAGCTTATTTTGT 59.404 34.615 15.13 0.00 42.23 2.83
373 374 7.119846 AGCTCGAGTCATTAAGCTTATTTTGTT 59.880 33.333 15.13 0.37 42.23 2.83
374 375 8.388103 GCTCGAGTCATTAAGCTTATTTTGTTA 58.612 33.333 15.13 0.00 0.00 2.41
377 378 8.985694 CGAGTCATTAAGCTTATTTTGTTAACG 58.014 33.333 7.08 2.69 0.00 3.18
380 381 8.786028 GTCATTAAGCTTATTTTGTTAACGAGC 58.214 33.333 7.08 0.00 0.00 5.03
381 382 8.726988 TCATTAAGCTTATTTTGTTAACGAGCT 58.273 29.630 7.08 1.05 40.41 4.09
382 383 9.000018 CATTAAGCTTATTTTGTTAACGAGCTC 58.000 33.333 7.08 2.73 37.97 4.09
383 384 5.204673 AGCTTATTTTGTTAACGAGCTCG 57.795 39.130 33.45 33.45 46.33 5.03
384 385 4.092968 AGCTTATTTTGTTAACGAGCTCGG 59.907 41.667 36.93 20.54 44.95 4.63
385 386 4.092383 GCTTATTTTGTTAACGAGCTCGGA 59.908 41.667 36.93 23.21 44.95 4.55
386 387 5.220605 GCTTATTTTGTTAACGAGCTCGGAT 60.221 40.000 36.93 27.27 44.95 4.18
387 388 6.674760 GCTTATTTTGTTAACGAGCTCGGATT 60.675 38.462 36.93 25.66 44.95 3.01
388 389 7.464977 GCTTATTTTGTTAACGAGCTCGGATTA 60.465 37.037 36.93 24.64 44.95 1.75
389 390 5.520022 TTTTGTTAACGAGCTCGGATTAC 57.480 39.130 36.93 27.14 44.95 1.89
390 391 3.853831 TGTTAACGAGCTCGGATTACA 57.146 42.857 36.93 29.05 44.95 2.41
391 392 4.380841 TGTTAACGAGCTCGGATTACAT 57.619 40.909 36.93 14.11 44.95 2.29
392 393 4.357142 TGTTAACGAGCTCGGATTACATC 58.643 43.478 36.93 19.29 44.95 3.06
393 394 2.121116 AACGAGCTCGGATTACATCG 57.879 50.000 36.93 11.94 44.95 3.84
394 395 1.306148 ACGAGCTCGGATTACATCGA 58.694 50.000 36.93 0.00 44.95 3.59
395 396 1.002684 ACGAGCTCGGATTACATCGAC 60.003 52.381 36.93 0.00 44.95 4.20
396 397 1.264557 CGAGCTCGGATTACATCGACT 59.735 52.381 28.40 0.00 35.37 4.18
397 398 2.656085 GAGCTCGGATTACATCGACTG 58.344 52.381 0.00 0.00 0.00 3.51
398 399 1.338337 AGCTCGGATTACATCGACTGG 59.662 52.381 0.00 0.00 0.00 4.00
399 400 1.337071 GCTCGGATTACATCGACTGGA 59.663 52.381 0.00 0.00 0.00 3.86
400 401 2.859032 GCTCGGATTACATCGACTGGAC 60.859 54.545 0.00 0.00 0.00 4.02
401 402 2.619177 CTCGGATTACATCGACTGGACT 59.381 50.000 0.00 0.00 0.00 3.85
402 403 2.617308 TCGGATTACATCGACTGGACTC 59.383 50.000 0.00 0.00 0.00 3.36
403 404 2.602456 CGGATTACATCGACTGGACTCG 60.602 54.545 0.00 0.00 34.83 4.18
404 405 2.358267 GGATTACATCGACTGGACTCGT 59.642 50.000 0.00 0.00 35.10 4.18
405 406 3.181489 GGATTACATCGACTGGACTCGTT 60.181 47.826 0.00 0.00 35.10 3.85
406 407 4.036027 GGATTACATCGACTGGACTCGTTA 59.964 45.833 0.00 0.00 35.10 3.18
407 408 4.611310 TTACATCGACTGGACTCGTTAG 57.389 45.455 0.00 0.00 35.10 2.34
408 409 2.434428 ACATCGACTGGACTCGTTAGT 58.566 47.619 0.00 0.00 39.21 2.24
421 422 3.713858 TCGTTAGTCCACGAGTTCAAA 57.286 42.857 0.00 0.00 44.18 2.69
422 423 3.374745 TCGTTAGTCCACGAGTTCAAAC 58.625 45.455 0.00 0.00 44.18 2.93
423 424 2.473984 CGTTAGTCCACGAGTTCAAACC 59.526 50.000 0.00 0.00 43.15 3.27
424 425 3.460103 GTTAGTCCACGAGTTCAAACCA 58.540 45.455 0.00 0.00 0.00 3.67
425 426 2.240493 AGTCCACGAGTTCAAACCAG 57.760 50.000 0.00 0.00 0.00 4.00
426 427 1.485066 AGTCCACGAGTTCAAACCAGT 59.515 47.619 0.00 0.00 0.00 4.00
427 428 1.865340 GTCCACGAGTTCAAACCAGTC 59.135 52.381 0.00 0.00 0.00 3.51
428 429 0.859232 CCACGAGTTCAAACCAGTCG 59.141 55.000 0.00 0.00 36.71 4.18
429 430 1.537348 CCACGAGTTCAAACCAGTCGA 60.537 52.381 9.20 0.00 34.72 4.20
430 431 1.521423 CACGAGTTCAAACCAGTCGAC 59.479 52.381 7.70 7.70 34.72 4.20
431 432 1.137513 CGAGTTCAAACCAGTCGACC 58.862 55.000 13.01 0.00 32.32 4.79
432 433 1.509703 GAGTTCAAACCAGTCGACCC 58.490 55.000 13.01 0.00 0.00 4.46
433 434 0.834612 AGTTCAAACCAGTCGACCCA 59.165 50.000 13.01 0.00 0.00 4.51
434 435 1.210967 AGTTCAAACCAGTCGACCCAA 59.789 47.619 13.01 0.00 0.00 4.12
435 436 1.602377 GTTCAAACCAGTCGACCCAAG 59.398 52.381 13.01 0.79 0.00 3.61
436 437 0.834612 TCAAACCAGTCGACCCAAGT 59.165 50.000 13.01 1.48 0.00 3.16
437 438 1.202604 TCAAACCAGTCGACCCAAGTC 60.203 52.381 13.01 0.00 39.83 3.01
438 439 0.834612 AAACCAGTCGACCCAAGTCA 59.165 50.000 13.01 0.00 43.73 3.41
439 440 0.106149 AACCAGTCGACCCAAGTCAC 59.894 55.000 13.01 0.00 43.73 3.67
440 441 1.372997 CCAGTCGACCCAAGTCACG 60.373 63.158 13.01 0.00 43.73 4.35
441 442 1.658114 CAGTCGACCCAAGTCACGA 59.342 57.895 13.01 0.00 43.73 4.35
442 443 0.387367 CAGTCGACCCAAGTCACGAG 60.387 60.000 13.01 0.00 43.73 4.18
443 444 1.733399 GTCGACCCAAGTCACGAGC 60.733 63.158 3.51 0.00 43.73 5.03
444 445 1.901948 TCGACCCAAGTCACGAGCT 60.902 57.895 0.00 0.00 43.73 4.09
445 446 0.607217 TCGACCCAAGTCACGAGCTA 60.607 55.000 0.00 0.00 43.73 3.32
446 447 0.456312 CGACCCAAGTCACGAGCTAC 60.456 60.000 0.00 0.00 43.73 3.58
447 448 0.889306 GACCCAAGTCACGAGCTACT 59.111 55.000 0.00 0.00 42.99 2.57
448 449 0.889306 ACCCAAGTCACGAGCTACTC 59.111 55.000 0.00 0.00 0.00 2.59
449 450 4.632855 GACCCAAGTCACGAGCTACTCG 62.633 59.091 14.96 14.96 45.17 4.18
480 481 8.715191 CTCATGAGCTAATTAGAGTTCAGTTT 57.285 34.615 16.85 0.08 39.63 2.66
481 482 8.709386 TCATGAGCTAATTAGAGTTCAGTTTC 57.291 34.615 16.85 0.00 39.63 2.78
482 483 7.766278 TCATGAGCTAATTAGAGTTCAGTTTCC 59.234 37.037 16.85 0.00 39.63 3.13
483 484 7.004555 TGAGCTAATTAGAGTTCAGTTTCCA 57.995 36.000 16.85 0.00 32.41 3.53
484 485 7.099764 TGAGCTAATTAGAGTTCAGTTTCCAG 58.900 38.462 16.85 0.00 32.41 3.86
485 486 7.039011 TGAGCTAATTAGAGTTCAGTTTCCAGA 60.039 37.037 16.85 0.00 32.41 3.86
486 487 7.100409 AGCTAATTAGAGTTCAGTTTCCAGAC 58.900 38.462 16.85 0.00 0.00 3.51
487 488 6.314152 GCTAATTAGAGTTCAGTTTCCAGACC 59.686 42.308 16.85 0.00 0.00 3.85
488 489 6.441088 AATTAGAGTTCAGTTTCCAGACCT 57.559 37.500 0.00 0.00 0.00 3.85
489 490 7.554959 AATTAGAGTTCAGTTTCCAGACCTA 57.445 36.000 0.00 0.00 0.00 3.08
490 491 6.989155 TTAGAGTTCAGTTTCCAGACCTAA 57.011 37.500 0.00 0.00 0.00 2.69
491 492 7.554959 TTAGAGTTCAGTTTCCAGACCTAAT 57.445 36.000 0.00 0.00 0.00 1.73
492 493 6.043854 AGAGTTCAGTTTCCAGACCTAATC 57.956 41.667 0.00 0.00 0.00 1.75
493 494 5.544176 AGAGTTCAGTTTCCAGACCTAATCA 59.456 40.000 0.00 0.00 0.00 2.57
494 495 5.799213 AGTTCAGTTTCCAGACCTAATCAG 58.201 41.667 0.00 0.00 0.00 2.90
496 497 4.425772 TCAGTTTCCAGACCTAATCAGGA 58.574 43.478 0.00 0.00 45.91 3.86
497 498 4.223032 TCAGTTTCCAGACCTAATCAGGAC 59.777 45.833 0.00 0.00 45.91 3.85
498 499 3.195825 AGTTTCCAGACCTAATCAGGACG 59.804 47.826 0.00 0.00 45.91 4.79
499 500 2.820728 TCCAGACCTAATCAGGACGA 57.179 50.000 0.00 0.00 45.91 4.20
500 501 3.095912 TCCAGACCTAATCAGGACGAA 57.904 47.619 0.00 0.00 45.91 3.85
501 502 3.643237 TCCAGACCTAATCAGGACGAAT 58.357 45.455 0.00 0.00 45.91 3.34
502 503 3.384789 TCCAGACCTAATCAGGACGAATG 59.615 47.826 0.00 0.00 45.91 2.67
503 504 3.493350 CCAGACCTAATCAGGACGAATGG 60.493 52.174 0.00 0.00 45.91 3.16
504 505 2.700897 AGACCTAATCAGGACGAATGGG 59.299 50.000 0.00 0.00 45.91 4.00
505 506 2.434702 GACCTAATCAGGACGAATGGGT 59.565 50.000 0.00 0.00 45.91 4.51
506 507 2.844348 ACCTAATCAGGACGAATGGGTT 59.156 45.455 0.00 0.00 45.91 4.11
507 508 3.206150 CCTAATCAGGACGAATGGGTTG 58.794 50.000 0.00 0.00 45.91 3.77
508 509 1.463674 AATCAGGACGAATGGGTTGC 58.536 50.000 0.00 0.00 0.00 4.17
509 510 0.620556 ATCAGGACGAATGGGTTGCT 59.379 50.000 0.00 0.00 0.00 3.91
510 511 0.400213 TCAGGACGAATGGGTTGCTT 59.600 50.000 0.00 0.00 0.00 3.91
536 537 2.512286 CATGCACCTGCCGATCGT 60.512 61.111 15.09 0.00 41.18 3.73
540 541 2.579787 CACCTGCCGATCGTCGTC 60.580 66.667 15.09 0.80 38.40 4.20
595 596 4.943705 TGCAGAGAATTTCTTATGGTGACC 59.056 41.667 0.00 0.00 32.41 4.02
627 628 3.870606 CGAAATTCGCCGACCACT 58.129 55.556 1.35 0.00 31.14 4.00
628 629 3.038946 CGAAATTCGCCGACCACTA 57.961 52.632 1.35 0.00 31.14 2.74
700 701 5.508200 ACGGTAGAGATCTCATTTCTCAC 57.492 43.478 24.39 9.60 41.72 3.51
776 778 2.223572 GGTCAAAATGGGATGCTTAGCG 60.224 50.000 0.00 0.00 0.00 4.26
1019 1056 1.732259 CATGGTGCAACTCCTCGTAAC 59.268 52.381 2.04 0.00 36.74 2.50
1628 1824 4.384846 CCGCATAGTCACGGTGTAATTATC 59.615 45.833 8.17 0.00 44.46 1.75
1629 1825 4.384846 CGCATAGTCACGGTGTAATTATCC 59.615 45.833 8.17 0.00 0.00 2.59
1642 1838 6.423001 GGTGTAATTATCCGTTAGTGTCATCC 59.577 42.308 0.00 0.00 0.00 3.51
1646 1842 5.925506 TTATCCGTTAGTGTCATCCTCAA 57.074 39.130 0.00 0.00 0.00 3.02
1653 1849 5.006068 CGTTAGTGTCATCCTCAACATCATG 59.994 44.000 0.00 0.00 0.00 3.07
1654 1850 4.564782 AGTGTCATCCTCAACATCATGT 57.435 40.909 0.00 0.00 0.00 3.21
1655 1851 5.682234 AGTGTCATCCTCAACATCATGTA 57.318 39.130 0.00 0.00 0.00 2.29
1656 1852 5.668471 AGTGTCATCCTCAACATCATGTAG 58.332 41.667 0.00 0.00 0.00 2.74
1687 1885 2.614829 AATAAATCACGAGGACGGGG 57.385 50.000 0.00 0.00 43.75 5.73
1688 1886 0.106149 ATAAATCACGAGGACGGGGC 59.894 55.000 0.00 0.00 43.75 5.80
1689 1887 2.287457 TAAATCACGAGGACGGGGCG 62.287 60.000 0.00 0.00 43.75 6.13
1704 1902 3.499737 GCGTCGGCCCATTGTCTG 61.500 66.667 0.00 0.00 0.00 3.51
1705 1903 2.819595 CGTCGGCCCATTGTCTGG 60.820 66.667 0.00 0.00 45.51 3.86
1712 1910 3.599584 CCATTGTCTGGGCAGCTG 58.400 61.111 10.11 10.11 41.82 4.24
1713 1911 2.050350 CCATTGTCTGGGCAGCTGG 61.050 63.158 17.12 0.00 41.82 4.85
1714 1912 1.303888 CATTGTCTGGGCAGCTGGT 60.304 57.895 17.12 0.00 0.00 4.00
1715 1913 1.303888 ATTGTCTGGGCAGCTGGTG 60.304 57.895 17.12 1.76 0.00 4.17
1716 1914 2.072874 ATTGTCTGGGCAGCTGGTGT 62.073 55.000 17.12 0.00 0.00 4.16
1717 1915 2.113986 GTCTGGGCAGCTGGTGTT 59.886 61.111 17.12 0.00 0.00 3.32
1718 1916 2.113774 TCTGGGCAGCTGGTGTTG 59.886 61.111 17.12 0.00 0.00 3.33
1727 1925 3.677648 CTGGTGTTGCTGCCAGCC 61.678 66.667 15.29 0.00 44.65 4.85
1730 1928 3.982241 GTGTTGCTGCCAGCCCAC 61.982 66.667 15.29 16.52 41.51 4.61
1731 1929 4.208403 TGTTGCTGCCAGCCCACT 62.208 61.111 15.29 0.00 41.51 4.00
1732 1930 2.914097 GTTGCTGCCAGCCCACTT 60.914 61.111 15.29 0.00 41.51 3.16
1733 1931 1.603455 GTTGCTGCCAGCCCACTTA 60.603 57.895 15.29 0.00 41.51 2.24
1734 1932 1.152599 TTGCTGCCAGCCCACTTAA 59.847 52.632 15.29 0.00 41.51 1.85
1735 1933 0.895100 TTGCTGCCAGCCCACTTAAG 60.895 55.000 15.29 0.00 41.51 1.85
1736 1934 1.303643 GCTGCCAGCCCACTTAAGT 60.304 57.895 5.06 1.12 34.48 2.24
1737 1935 0.895559 GCTGCCAGCCCACTTAAGTT 60.896 55.000 5.06 0.00 34.48 2.66
1738 1936 1.168714 CTGCCAGCCCACTTAAGTTC 58.831 55.000 5.07 0.00 0.00 3.01
1739 1937 0.605319 TGCCAGCCCACTTAAGTTCG 60.605 55.000 5.07 0.00 0.00 3.95
1740 1938 0.321298 GCCAGCCCACTTAAGTTCGA 60.321 55.000 5.07 0.00 0.00 3.71
1741 1939 1.726853 CCAGCCCACTTAAGTTCGAG 58.273 55.000 5.07 0.00 0.00 4.04
1742 1940 1.002087 CCAGCCCACTTAAGTTCGAGT 59.998 52.381 5.07 0.00 0.00 4.18
1743 1941 2.338500 CAGCCCACTTAAGTTCGAGTC 58.662 52.381 5.07 0.00 0.00 3.36
1744 1942 1.275573 AGCCCACTTAAGTTCGAGTCC 59.724 52.381 5.07 0.00 0.00 3.85
1745 1943 1.275573 GCCCACTTAAGTTCGAGTCCT 59.724 52.381 5.07 0.00 0.00 3.85
1746 1944 2.931320 GCCCACTTAAGTTCGAGTCCTG 60.931 54.545 5.07 0.00 0.00 3.86
1747 1945 2.353803 CCCACTTAAGTTCGAGTCCTGG 60.354 54.545 5.07 0.63 0.00 4.45
1748 1946 2.299297 CCACTTAAGTTCGAGTCCTGGT 59.701 50.000 5.07 0.00 0.00 4.00
1749 1947 3.244112 CCACTTAAGTTCGAGTCCTGGTT 60.244 47.826 5.07 0.00 0.00 3.67
1750 1948 4.377897 CACTTAAGTTCGAGTCCTGGTTT 58.622 43.478 5.07 0.00 0.00 3.27
1751 1949 4.211374 CACTTAAGTTCGAGTCCTGGTTTG 59.789 45.833 5.07 0.00 0.00 2.93
1752 1950 2.256117 AAGTTCGAGTCCTGGTTTGG 57.744 50.000 0.00 0.00 0.00 3.28
1753 1951 1.420430 AGTTCGAGTCCTGGTTTGGA 58.580 50.000 0.00 0.00 0.00 3.53
1759 1957 2.280524 TCCTGGTTTGGACACGCG 60.281 61.111 3.53 3.53 0.00 6.01
1760 1958 2.280524 CCTGGTTTGGACACGCGA 60.281 61.111 15.93 0.00 0.00 5.87
1761 1959 1.671054 CCTGGTTTGGACACGCGAT 60.671 57.895 15.93 0.00 0.00 4.58
1762 1960 1.497278 CTGGTTTGGACACGCGATG 59.503 57.895 15.93 10.38 0.00 3.84
1763 1961 2.175811 GGTTTGGACACGCGATGC 59.824 61.111 15.93 6.38 0.00 3.91
1764 1962 2.325082 GGTTTGGACACGCGATGCT 61.325 57.895 15.93 0.00 0.00 3.79
1765 1963 1.132640 GTTTGGACACGCGATGCTC 59.867 57.895 15.93 7.74 0.00 4.26
1766 1964 2.379634 TTTGGACACGCGATGCTCG 61.380 57.895 15.93 1.80 43.89 5.03
1767 1965 3.567478 TTGGACACGCGATGCTCGT 62.567 57.895 15.93 0.00 42.81 4.18
1773 1971 2.507102 CGCGATGCTCGTGGAGTT 60.507 61.111 0.00 0.00 45.61 3.01
1774 1972 2.094659 CGCGATGCTCGTGGAGTTT 61.095 57.895 0.00 0.00 45.61 2.66
1775 1973 1.710339 GCGATGCTCGTGGAGTTTC 59.290 57.895 7.27 0.00 42.81 2.78
1776 1974 0.737715 GCGATGCTCGTGGAGTTTCT 60.738 55.000 7.27 0.00 42.81 2.52
1777 1975 1.272781 CGATGCTCGTGGAGTTTCTC 58.727 55.000 0.00 0.00 34.72 2.87
1817 2015 1.237661 AGGTTAACCCTTGGGTTGGT 58.762 50.000 28.76 10.10 42.73 3.67
1818 2016 1.146359 AGGTTAACCCTTGGGTTGGTC 59.854 52.381 28.76 18.92 42.73 4.02
1819 2017 1.146359 GGTTAACCCTTGGGTTGGTCT 59.854 52.381 28.76 9.41 32.40 3.85
1820 2018 2.511659 GTTAACCCTTGGGTTGGTCTC 58.488 52.381 28.76 13.30 32.40 3.36
1821 2019 1.822425 TAACCCTTGGGTTGGTCTCA 58.178 50.000 28.76 9.44 32.40 3.27
1822 2020 1.158007 AACCCTTGGGTTGGTCTCAT 58.842 50.000 22.01 0.00 32.40 2.90
1823 2021 1.158007 ACCCTTGGGTTGGTCTCATT 58.842 50.000 5.34 0.00 0.00 2.57
1824 2022 1.503347 ACCCTTGGGTTGGTCTCATTT 59.497 47.619 5.34 0.00 0.00 2.32
1825 2023 2.719705 ACCCTTGGGTTGGTCTCATTTA 59.280 45.455 5.34 0.00 0.00 1.40
1826 2024 3.336694 ACCCTTGGGTTGGTCTCATTTAT 59.663 43.478 5.34 0.00 0.00 1.40
1827 2025 4.542525 ACCCTTGGGTTGGTCTCATTTATA 59.457 41.667 5.34 0.00 0.00 0.98
1828 2026 5.015817 ACCCTTGGGTTGGTCTCATTTATAA 59.984 40.000 5.34 0.00 0.00 0.98
1829 2027 5.955355 CCCTTGGGTTGGTCTCATTTATAAA 59.045 40.000 0.00 0.00 0.00 1.40
1830 2028 6.611236 CCCTTGGGTTGGTCTCATTTATAAAT 59.389 38.462 4.81 4.81 0.00 1.40
1831 2029 7.782644 CCCTTGGGTTGGTCTCATTTATAAATA 59.217 37.037 10.34 0.00 0.00 1.40
1832 2030 9.196139 CCTTGGGTTGGTCTCATTTATAAATAA 57.804 33.333 10.34 0.00 0.00 1.40
1862 2060 4.084849 CGACATATTTCTCGTGATTCCTGC 60.085 45.833 0.00 0.00 0.00 4.85
1876 2074 5.005779 GTGATTCCTGCTATTACACTTCGTG 59.994 44.000 0.00 0.00 39.75 4.35
1895 2096 9.229784 ACTTCGTGTATATCAATAAAGTACGTG 57.770 33.333 0.00 0.00 0.00 4.49
1911 2112 8.516811 AAAGTACGTGCTAGCAATGTATATAC 57.483 34.615 25.33 18.23 0.00 1.47
1912 2113 7.210718 AGTACGTGCTAGCAATGTATATACA 57.789 36.000 25.33 17.65 40.98 2.29
1921 2122 4.133820 GCAATGTATATACACAGCCACCA 58.866 43.478 17.69 0.00 39.30 4.17
1923 2124 5.067153 GCAATGTATATACACAGCCACCAAA 59.933 40.000 17.69 0.00 39.30 3.28
1927 2128 8.988546 ATGTATATACACAGCCACCAAATTTA 57.011 30.769 17.69 0.00 39.30 1.40
1935 2161 3.763360 CAGCCACCAAATTTAGGACATGA 59.237 43.478 0.00 0.00 0.00 3.07
1936 2162 4.403432 CAGCCACCAAATTTAGGACATGAT 59.597 41.667 0.00 0.00 0.00 2.45
1954 2180 7.201785 GGACATGATTCCGGTTACAAATATGTT 60.202 37.037 0.00 0.00 41.05 2.71
1964 2190 8.176365 CCGGTTACAAATATGTTCGAACATTTA 58.824 33.333 39.86 27.39 46.95 1.40
1965 2191 9.710979 CGGTTACAAATATGTTCGAACATTTAT 57.289 29.630 39.86 28.21 46.95 1.40
2054 2281 8.568732 ACCAGAATAAAACATAAACAAACACG 57.431 30.769 0.00 0.00 0.00 4.49
2062 2289 8.568732 AAAACATAAACAAACACGAGTTATGG 57.431 30.769 0.00 0.00 36.84 2.74
2063 2290 7.499321 AACATAAACAAACACGAGTTATGGA 57.501 32.000 0.00 0.00 36.84 3.41
2066 2293 8.573035 ACATAAACAAACACGAGTTATGGAAAT 58.427 29.630 0.00 0.00 36.84 2.17
2068 2295 9.974980 ATAAACAAACACGAGTTATGGAAATTT 57.025 25.926 0.00 0.00 36.84 1.82
2071 2298 7.081976 ACAAACACGAGTTATGGAAATTTAGC 58.918 34.615 0.00 0.00 36.84 3.09
2072 2299 5.813080 ACACGAGTTATGGAAATTTAGCC 57.187 39.130 0.00 0.00 0.00 3.93
2073 2300 5.497474 ACACGAGTTATGGAAATTTAGCCT 58.503 37.500 0.00 0.00 0.00 4.58
2078 2305 6.079712 AGTTATGGAAATTTAGCCTGGACT 57.920 37.500 0.00 0.00 0.00 3.85
2112 2339 1.523758 AGAAGGTGTGGCTAAAAGCG 58.476 50.000 0.00 0.00 43.62 4.68
2127 2354 3.988379 AAAGCGTTGACATGTGACAAT 57.012 38.095 1.15 0.00 32.94 2.71
2128 2355 2.975410 AGCGTTGACATGTGACAATG 57.025 45.000 1.15 9.08 38.87 2.82
2132 2359 3.665409 GCGTTGACATGTGACAATGAAAG 59.335 43.478 18.75 5.18 38.39 2.62
2133 2360 3.665409 CGTTGACATGTGACAATGAAAGC 59.335 43.478 1.15 0.00 38.39 3.51
2135 2362 4.492791 TGACATGTGACAATGAAAGCTG 57.507 40.909 1.15 0.00 0.00 4.24
2140 2367 4.754372 TGTGACAATGAAAGCTGATGTC 57.246 40.909 9.42 9.42 40.53 3.06
2141 2368 4.392047 TGTGACAATGAAAGCTGATGTCT 58.608 39.130 14.61 0.00 40.70 3.41
2154 2381 0.315568 GATGTCTTCGGGCGCTAGAT 59.684 55.000 7.64 0.00 0.00 1.98
2173 2401 8.237267 CGCTAGATTTATTCTTTGAAACCTTGT 58.763 33.333 0.00 0.00 35.79 3.16
2174 2402 9.561270 GCTAGATTTATTCTTTGAAACCTTGTC 57.439 33.333 0.00 0.00 35.79 3.18
2195 2423 2.893489 CTCTCGGTCATCCCATCATACA 59.107 50.000 0.00 0.00 0.00 2.29
2202 2430 4.446167 GGTCATCCCATCATACACAATGGA 60.446 45.833 2.98 0.00 44.37 3.41
2204 2432 4.413189 TCATCCCATCATACACAATGGACT 59.587 41.667 2.98 0.00 44.37 3.85
2209 2437 6.772233 TCCCATCATACACAATGGACTTATTG 59.228 38.462 2.98 0.00 44.37 1.90
2212 2440 7.201848 CCATCATACACAATGGACTTATTGCTT 60.202 37.037 0.00 0.00 44.37 3.91
2215 2443 9.237187 TCATACACAATGGACTTATTGCTTTTA 57.763 29.630 0.00 0.00 40.80 1.52
2218 2446 6.719370 ACACAATGGACTTATTGCTTTTAGGA 59.281 34.615 0.00 0.00 40.80 2.94
2219 2447 7.232534 ACACAATGGACTTATTGCTTTTAGGAA 59.767 33.333 0.00 0.00 40.80 3.36
2220 2448 8.087750 CACAATGGACTTATTGCTTTTAGGAAA 58.912 33.333 0.00 0.00 40.80 3.13
2260 2488 8.774586 CACCAATTTAATAAGATTAGGTCGAGG 58.225 37.037 0.00 0.00 0.00 4.63
2353 3122 1.725164 GCTAAGTTCCTTTGGTCGACG 59.275 52.381 9.92 0.00 0.00 5.12
2355 3124 1.861971 AAGTTCCTTTGGTCGACGAC 58.138 50.000 19.70 19.70 0.00 4.34
2398 3167 5.710984 ACTTGTACATTCTGTAGAGAACCG 58.289 41.667 4.15 2.12 41.12 4.44
2399 3168 5.475909 ACTTGTACATTCTGTAGAGAACCGA 59.524 40.000 4.15 0.00 41.12 4.69
2406 3175 5.723672 TTCTGTAGAGAACCGAAAGATGT 57.276 39.130 0.00 0.00 32.98 3.06
2412 3181 0.721718 GAACCGAAAGATGTGAGCCG 59.278 55.000 0.00 0.00 0.00 5.52
2424 3193 2.554142 TGTGAGCCGCATCTTATTCAG 58.446 47.619 0.00 0.00 0.00 3.02
2426 3195 2.939103 GTGAGCCGCATCTTATTCAGTT 59.061 45.455 0.00 0.00 0.00 3.16
2427 3196 4.119862 GTGAGCCGCATCTTATTCAGTTA 58.880 43.478 0.00 0.00 0.00 2.24
2429 3198 4.751600 TGAGCCGCATCTTATTCAGTTATG 59.248 41.667 0.00 0.00 0.00 1.90
2430 3199 3.499918 AGCCGCATCTTATTCAGTTATGC 59.500 43.478 0.00 0.00 39.59 3.14
2442 3211 3.331150 TCAGTTATGCGTCGACCAAATT 58.669 40.909 10.58 0.00 0.00 1.82
2446 3215 5.062934 CAGTTATGCGTCGACCAAATTTCTA 59.937 40.000 10.58 0.00 0.00 2.10
2447 3216 5.815740 AGTTATGCGTCGACCAAATTTCTAT 59.184 36.000 10.58 0.00 0.00 1.98
2453 3222 4.630069 CGTCGACCAAATTTCTATGGAGTT 59.370 41.667 10.58 0.00 39.12 3.01
2480 3249 1.546029 GGGAGAGATTTGGGTGCAAAC 59.454 52.381 0.00 0.00 0.00 2.93
2481 3250 2.238521 GGAGAGATTTGGGTGCAAACA 58.761 47.619 0.00 0.00 0.00 2.83
2486 3255 1.963515 GATTTGGGTGCAAACAGGACT 59.036 47.619 0.00 0.00 38.81 3.85
2519 3293 2.368221 AGGATCTAGAGTTGCTCATGGC 59.632 50.000 0.00 0.00 42.22 4.40
2524 3298 5.420725 TCTAGAGTTGCTCATGGCTTTAA 57.579 39.130 7.54 0.00 42.39 1.52
2525 3299 5.994250 TCTAGAGTTGCTCATGGCTTTAAT 58.006 37.500 7.54 0.00 42.39 1.40
2529 3304 2.497273 GTTGCTCATGGCTTTAATGGGT 59.503 45.455 7.54 0.00 42.39 4.51
2555 3330 3.282885 CCCTAGAATGGCTTGAAAGGAC 58.717 50.000 0.00 0.00 0.00 3.85
2561 3336 1.774110 TGGCTTGAAAGGACTTTGCA 58.226 45.000 1.43 0.00 32.11 4.08
2562 3337 2.106566 TGGCTTGAAAGGACTTTGCAA 58.893 42.857 1.43 0.00 32.11 4.08
2563 3338 2.159114 TGGCTTGAAAGGACTTTGCAAC 60.159 45.455 0.00 0.00 32.11 4.17
2564 3339 2.101415 GGCTTGAAAGGACTTTGCAACT 59.899 45.455 0.00 0.00 32.11 3.16
2565 3340 3.430790 GGCTTGAAAGGACTTTGCAACTT 60.431 43.478 0.00 0.00 32.11 2.66
2566 3341 4.183865 GCTTGAAAGGACTTTGCAACTTT 58.816 39.130 11.35 11.35 35.99 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.498570 GCAAAAGTTCTCTCTCCTATTCATCAT 59.501 37.037 0.00 0.00 0.00 2.45
1 2 6.820656 GCAAAAGTTCTCTCTCCTATTCATCA 59.179 38.462 0.00 0.00 0.00 3.07
2 3 6.259829 GGCAAAAGTTCTCTCTCCTATTCATC 59.740 42.308 0.00 0.00 0.00 2.92
3 4 6.118852 GGCAAAAGTTCTCTCTCCTATTCAT 58.881 40.000 0.00 0.00 0.00 2.57
4 5 5.013079 TGGCAAAAGTTCTCTCTCCTATTCA 59.987 40.000 0.00 0.00 0.00 2.57
5 6 5.352846 GTGGCAAAAGTTCTCTCTCCTATTC 59.647 44.000 0.00 0.00 0.00 1.75
6 7 5.249420 GTGGCAAAAGTTCTCTCTCCTATT 58.751 41.667 0.00 0.00 0.00 1.73
7 8 4.621747 CGTGGCAAAAGTTCTCTCTCCTAT 60.622 45.833 0.00 0.00 0.00 2.57
8 9 3.306088 CGTGGCAAAAGTTCTCTCTCCTA 60.306 47.826 0.00 0.00 0.00 2.94
9 10 2.548920 CGTGGCAAAAGTTCTCTCTCCT 60.549 50.000 0.00 0.00 0.00 3.69
10 11 1.801178 CGTGGCAAAAGTTCTCTCTCC 59.199 52.381 0.00 0.00 0.00 3.71
11 12 2.476997 GACGTGGCAAAAGTTCTCTCTC 59.523 50.000 0.00 0.00 0.00 3.20
12 13 2.158957 TGACGTGGCAAAAGTTCTCTCT 60.159 45.455 0.00 0.00 0.00 3.10
13 14 2.210116 TGACGTGGCAAAAGTTCTCTC 58.790 47.619 0.00 0.00 0.00 3.20
14 15 2.213499 CTGACGTGGCAAAAGTTCTCT 58.787 47.619 0.00 0.00 0.00 3.10
15 16 1.334149 GCTGACGTGGCAAAAGTTCTC 60.334 52.381 0.00 0.00 0.00 2.87
16 17 0.663153 GCTGACGTGGCAAAAGTTCT 59.337 50.000 0.00 0.00 0.00 3.01
17 18 0.657368 CGCTGACGTGGCAAAAGTTC 60.657 55.000 0.00 0.00 33.53 3.01
18 19 1.092921 TCGCTGACGTGGCAAAAGTT 61.093 50.000 0.00 0.00 41.18 2.66
19 20 1.092921 TTCGCTGACGTGGCAAAAGT 61.093 50.000 0.00 0.00 41.18 2.66
20 21 0.384725 CTTCGCTGACGTGGCAAAAG 60.385 55.000 0.00 0.47 41.18 2.27
21 22 0.812014 TCTTCGCTGACGTGGCAAAA 60.812 50.000 0.00 0.00 41.18 2.44
22 23 1.227409 TCTTCGCTGACGTGGCAAA 60.227 52.632 0.00 0.00 41.18 3.68
23 24 1.954146 GTCTTCGCTGACGTGGCAA 60.954 57.895 0.00 0.00 41.18 4.52
24 25 2.355837 GTCTTCGCTGACGTGGCA 60.356 61.111 0.00 0.00 41.18 4.92
25 26 3.112709 GGTCTTCGCTGACGTGGC 61.113 66.667 0.00 0.00 41.18 5.01
26 27 2.805353 CGGTCTTCGCTGACGTGG 60.805 66.667 0.00 0.00 41.18 4.94
27 28 2.805353 CCGGTCTTCGCTGACGTG 60.805 66.667 0.00 0.00 41.18 4.49
28 29 3.264866 GACCGGTCTTCGCTGACGT 62.265 63.158 27.64 0.00 41.18 4.34
29 30 2.504244 GACCGGTCTTCGCTGACG 60.504 66.667 27.64 0.00 37.81 4.35
30 31 0.599204 TTTGACCGGTCTTCGCTGAC 60.599 55.000 33.39 6.67 37.59 3.51
31 32 0.105224 TTTTGACCGGTCTTCGCTGA 59.895 50.000 33.39 10.38 37.59 4.26
32 33 0.234884 GTTTTGACCGGTCTTCGCTG 59.765 55.000 33.39 0.00 37.59 5.18
33 34 0.883370 GGTTTTGACCGGTCTTCGCT 60.883 55.000 33.39 0.00 37.59 4.93
34 35 1.572941 GGTTTTGACCGGTCTTCGC 59.427 57.895 33.39 20.45 37.59 4.70
43 44 2.011222 TGACTCAACACGGTTTTGACC 58.989 47.619 5.65 2.59 0.00 4.02
44 45 2.538939 GCTGACTCAACACGGTTTTGAC 60.539 50.000 5.65 0.00 0.00 3.18
45 46 1.668751 GCTGACTCAACACGGTTTTGA 59.331 47.619 9.18 9.18 0.00 2.69
46 47 1.400142 TGCTGACTCAACACGGTTTTG 59.600 47.619 0.61 0.61 0.00 2.44
47 48 1.745232 TGCTGACTCAACACGGTTTT 58.255 45.000 0.00 0.00 0.00 2.43
48 49 1.873591 GATGCTGACTCAACACGGTTT 59.126 47.619 0.00 0.00 0.00 3.27
49 50 1.202639 TGATGCTGACTCAACACGGTT 60.203 47.619 0.00 0.00 0.00 4.44
50 51 0.392706 TGATGCTGACTCAACACGGT 59.607 50.000 0.00 0.00 0.00 4.83
51 52 1.073964 CTGATGCTGACTCAACACGG 58.926 55.000 0.00 0.00 0.00 4.94
52 53 1.788258 ACTGATGCTGACTCAACACG 58.212 50.000 0.00 0.00 0.00 4.49
53 54 3.677121 CAGTACTGATGCTGACTCAACAC 59.323 47.826 18.45 0.00 40.79 3.32
54 55 3.306294 CCAGTACTGATGCTGACTCAACA 60.306 47.826 24.68 0.00 40.79 3.33
55 56 3.257393 CCAGTACTGATGCTGACTCAAC 58.743 50.000 24.68 0.00 40.79 3.18
56 57 2.354103 GCCAGTACTGATGCTGACTCAA 60.354 50.000 24.68 0.00 40.79 3.02
57 58 1.205655 GCCAGTACTGATGCTGACTCA 59.794 52.381 24.68 0.00 40.79 3.41
58 59 1.480137 AGCCAGTACTGATGCTGACTC 59.520 52.381 24.68 2.01 40.79 3.36
59 60 1.566211 AGCCAGTACTGATGCTGACT 58.434 50.000 24.68 6.65 40.79 3.41
60 61 2.005451 CAAGCCAGTACTGATGCTGAC 58.995 52.381 24.68 4.54 40.79 3.51
61 62 1.065926 CCAAGCCAGTACTGATGCTGA 60.066 52.381 24.68 0.00 40.79 4.26
62 63 1.376543 CCAAGCCAGTACTGATGCTG 58.623 55.000 24.68 16.80 38.23 4.41
63 64 0.393537 GCCAAGCCAGTACTGATGCT 60.394 55.000 24.68 20.80 35.08 3.79
64 65 0.393537 AGCCAAGCCAGTACTGATGC 60.394 55.000 24.68 18.90 0.00 3.91
65 66 1.065926 TCAGCCAAGCCAGTACTGATG 60.066 52.381 24.68 17.88 32.65 3.07
66 67 1.209019 CTCAGCCAAGCCAGTACTGAT 59.791 52.381 24.68 9.53 36.82 2.90
67 68 0.610174 CTCAGCCAAGCCAGTACTGA 59.390 55.000 24.68 0.00 36.08 3.41
68 69 0.610174 TCTCAGCCAAGCCAGTACTG 59.390 55.000 16.34 16.34 0.00 2.74
69 70 0.610687 GTCTCAGCCAAGCCAGTACT 59.389 55.000 0.00 0.00 0.00 2.73
70 71 0.737715 CGTCTCAGCCAAGCCAGTAC 60.738 60.000 0.00 0.00 0.00 2.73
71 72 0.898326 TCGTCTCAGCCAAGCCAGTA 60.898 55.000 0.00 0.00 0.00 2.74
72 73 2.164865 CTCGTCTCAGCCAAGCCAGT 62.165 60.000 0.00 0.00 0.00 4.00
73 74 1.447489 CTCGTCTCAGCCAAGCCAG 60.447 63.158 0.00 0.00 0.00 4.85
74 75 2.659016 CTCGTCTCAGCCAAGCCA 59.341 61.111 0.00 0.00 0.00 4.75
75 76 2.125350 CCTCGTCTCAGCCAAGCC 60.125 66.667 0.00 0.00 0.00 4.35
76 77 2.125350 CCCTCGTCTCAGCCAAGC 60.125 66.667 0.00 0.00 0.00 4.01
77 78 1.216710 GTCCCTCGTCTCAGCCAAG 59.783 63.158 0.00 0.00 0.00 3.61
78 79 0.039180 TAGTCCCTCGTCTCAGCCAA 59.961 55.000 0.00 0.00 0.00 4.52
79 80 0.039180 TTAGTCCCTCGTCTCAGCCA 59.961 55.000 0.00 0.00 0.00 4.75
80 81 1.135053 GTTTAGTCCCTCGTCTCAGCC 60.135 57.143 0.00 0.00 0.00 4.85
81 82 1.819903 AGTTTAGTCCCTCGTCTCAGC 59.180 52.381 0.00 0.00 0.00 4.26
82 83 4.701171 AGTAAGTTTAGTCCCTCGTCTCAG 59.299 45.833 0.00 0.00 0.00 3.35
83 84 4.660168 AGTAAGTTTAGTCCCTCGTCTCA 58.340 43.478 0.00 0.00 0.00 3.27
84 85 4.201802 CGAGTAAGTTTAGTCCCTCGTCTC 60.202 50.000 0.00 0.00 37.59 3.36
85 86 3.688673 CGAGTAAGTTTAGTCCCTCGTCT 59.311 47.826 0.00 0.00 37.59 4.18
86 87 3.181502 CCGAGTAAGTTTAGTCCCTCGTC 60.182 52.174 0.00 0.00 39.96 4.20
87 88 2.751806 CCGAGTAAGTTTAGTCCCTCGT 59.248 50.000 0.00 0.00 39.96 4.18
88 89 2.751806 ACCGAGTAAGTTTAGTCCCTCG 59.248 50.000 0.00 0.00 40.93 4.63
89 90 4.797800 AACCGAGTAAGTTTAGTCCCTC 57.202 45.455 2.08 0.00 30.95 4.30
90 91 4.590222 TCAAACCGAGTAAGTTTAGTCCCT 59.410 41.667 2.08 0.00 35.71 4.20
91 92 4.886579 TCAAACCGAGTAAGTTTAGTCCC 58.113 43.478 2.08 0.00 35.71 4.46
92 93 6.218746 TCTTCAAACCGAGTAAGTTTAGTCC 58.781 40.000 2.08 0.00 35.71 3.85
93 94 6.922407 ACTCTTCAAACCGAGTAAGTTTAGTC 59.078 38.462 0.00 0.00 38.63 2.59
94 95 6.814043 ACTCTTCAAACCGAGTAAGTTTAGT 58.186 36.000 0.00 0.00 38.63 2.24
95 96 7.437267 TCAACTCTTCAAACCGAGTAAGTTTAG 59.563 37.037 0.00 0.00 39.44 1.85
96 97 7.267128 TCAACTCTTCAAACCGAGTAAGTTTA 58.733 34.615 0.00 0.00 39.44 2.01
97 98 6.110707 TCAACTCTTCAAACCGAGTAAGTTT 58.889 36.000 0.00 0.00 39.44 2.66
98 99 5.667466 TCAACTCTTCAAACCGAGTAAGTT 58.333 37.500 0.00 0.00 39.44 2.66
99 100 5.272283 TCAACTCTTCAAACCGAGTAAGT 57.728 39.130 0.00 0.00 39.44 2.24
100 101 4.686554 CCTCAACTCTTCAAACCGAGTAAG 59.313 45.833 0.00 0.00 39.44 2.34
101 102 4.502604 CCCTCAACTCTTCAAACCGAGTAA 60.503 45.833 0.00 0.00 39.44 2.24
102 103 3.006537 CCCTCAACTCTTCAAACCGAGTA 59.993 47.826 0.00 0.00 39.44 2.59
103 104 2.224305 CCCTCAACTCTTCAAACCGAGT 60.224 50.000 0.00 0.00 41.97 4.18
104 105 2.037251 TCCCTCAACTCTTCAAACCGAG 59.963 50.000 0.00 0.00 0.00 4.63
105 106 2.043992 TCCCTCAACTCTTCAAACCGA 58.956 47.619 0.00 0.00 0.00 4.69
106 107 2.143925 GTCCCTCAACTCTTCAAACCG 58.856 52.381 0.00 0.00 0.00 4.44
107 108 3.493767 AGTCCCTCAACTCTTCAAACC 57.506 47.619 0.00 0.00 0.00 3.27
108 109 6.056236 AGTTTAGTCCCTCAACTCTTCAAAC 58.944 40.000 0.00 0.00 29.86 2.93
109 110 6.248569 AGTTTAGTCCCTCAACTCTTCAAA 57.751 37.500 0.00 0.00 0.00 2.69
110 111 5.888982 AGTTTAGTCCCTCAACTCTTCAA 57.111 39.130 0.00 0.00 0.00 2.69
111 112 5.888982 AAGTTTAGTCCCTCAACTCTTCA 57.111 39.130 0.00 0.00 28.15 3.02
112 113 6.164876 GGTAAGTTTAGTCCCTCAACTCTTC 58.835 44.000 0.00 0.00 28.15 2.87
113 114 5.012871 GGGTAAGTTTAGTCCCTCAACTCTT 59.987 44.000 0.00 0.00 37.18 2.85
114 115 4.531339 GGGTAAGTTTAGTCCCTCAACTCT 59.469 45.833 0.00 0.00 37.18 3.24
115 116 4.620097 CGGGTAAGTTTAGTCCCTCAACTC 60.620 50.000 0.00 0.00 37.92 3.01
116 117 3.260128 CGGGTAAGTTTAGTCCCTCAACT 59.740 47.826 0.00 0.00 37.92 3.16
117 118 3.593096 CGGGTAAGTTTAGTCCCTCAAC 58.407 50.000 0.00 0.00 37.92 3.18
118 119 2.568509 CCGGGTAAGTTTAGTCCCTCAA 59.431 50.000 0.00 0.00 37.92 3.02
119 120 2.181975 CCGGGTAAGTTTAGTCCCTCA 58.818 52.381 0.00 0.00 37.92 3.86
120 121 2.182827 ACCGGGTAAGTTTAGTCCCTC 58.817 52.381 6.32 0.00 37.92 4.30
121 122 2.332332 ACCGGGTAAGTTTAGTCCCT 57.668 50.000 6.32 0.00 37.92 4.20
122 123 3.076621 CAAACCGGGTAAGTTTAGTCCC 58.923 50.000 6.32 0.00 35.71 4.46
123 124 4.006780 TCAAACCGGGTAAGTTTAGTCC 57.993 45.455 6.32 0.00 35.71 3.85
124 125 5.299949 TCTTCAAACCGGGTAAGTTTAGTC 58.700 41.667 6.32 0.00 35.71 2.59
125 126 5.163269 ACTCTTCAAACCGGGTAAGTTTAGT 60.163 40.000 6.32 0.00 35.71 2.24
126 127 5.303165 ACTCTTCAAACCGGGTAAGTTTAG 58.697 41.667 6.32 0.00 35.71 1.85
127 128 5.294734 ACTCTTCAAACCGGGTAAGTTTA 57.705 39.130 6.32 0.00 35.71 2.01
128 129 4.160642 ACTCTTCAAACCGGGTAAGTTT 57.839 40.909 6.32 0.00 37.93 2.66
129 130 3.851458 ACTCTTCAAACCGGGTAAGTT 57.149 42.857 6.32 0.00 0.00 2.66
130 131 3.135167 TCAACTCTTCAAACCGGGTAAGT 59.865 43.478 6.32 0.00 0.00 2.24
131 132 3.735591 TCAACTCTTCAAACCGGGTAAG 58.264 45.455 6.32 0.00 0.00 2.34
132 133 3.495453 CCTCAACTCTTCAAACCGGGTAA 60.495 47.826 6.32 0.00 0.00 2.85
133 134 2.038033 CCTCAACTCTTCAAACCGGGTA 59.962 50.000 6.32 0.00 0.00 3.69
134 135 1.202770 CCTCAACTCTTCAAACCGGGT 60.203 52.381 6.32 0.00 0.00 5.28
135 136 1.523758 CCTCAACTCTTCAAACCGGG 58.476 55.000 6.32 0.00 0.00 5.73
136 137 1.071699 TCCCTCAACTCTTCAAACCGG 59.928 52.381 0.00 0.00 0.00 5.28
137 138 2.143925 GTCCCTCAACTCTTCAAACCG 58.856 52.381 0.00 0.00 0.00 4.44
138 139 3.493767 AGTCCCTCAACTCTTCAAACC 57.506 47.619 0.00 0.00 0.00 3.27
139 140 5.612351 ACTTAGTCCCTCAACTCTTCAAAC 58.388 41.667 0.00 0.00 0.00 2.93
140 141 5.888982 ACTTAGTCCCTCAACTCTTCAAA 57.111 39.130 0.00 0.00 0.00 2.69
141 142 7.386851 CAATACTTAGTCCCTCAACTCTTCAA 58.613 38.462 0.00 0.00 0.00 2.69
142 143 6.574465 GCAATACTTAGTCCCTCAACTCTTCA 60.574 42.308 0.00 0.00 0.00 3.02
143 144 5.813157 GCAATACTTAGTCCCTCAACTCTTC 59.187 44.000 0.00 0.00 0.00 2.87
144 145 5.338463 GGCAATACTTAGTCCCTCAACTCTT 60.338 44.000 0.00 0.00 0.00 2.85
145 146 4.162509 GGCAATACTTAGTCCCTCAACTCT 59.837 45.833 0.00 0.00 0.00 3.24
146 147 4.443621 GGCAATACTTAGTCCCTCAACTC 58.556 47.826 0.00 0.00 0.00 3.01
147 148 3.118738 CGGCAATACTTAGTCCCTCAACT 60.119 47.826 0.00 0.00 0.00 3.16
148 149 3.195661 CGGCAATACTTAGTCCCTCAAC 58.804 50.000 0.00 0.00 0.00 3.18
149 150 2.169769 CCGGCAATACTTAGTCCCTCAA 59.830 50.000 0.00 0.00 0.00 3.02
150 151 1.760613 CCGGCAATACTTAGTCCCTCA 59.239 52.381 0.00 0.00 0.00 3.86
151 152 1.761198 ACCGGCAATACTTAGTCCCTC 59.239 52.381 0.00 0.00 0.00 4.30
152 153 1.875488 ACCGGCAATACTTAGTCCCT 58.125 50.000 0.00 0.00 0.00 4.20
153 154 2.704464 AACCGGCAATACTTAGTCCC 57.296 50.000 0.00 0.00 0.00 4.46
154 155 6.149973 ACTTTAAAACCGGCAATACTTAGTCC 59.850 38.462 0.00 0.00 0.00 3.85
155 156 7.137490 ACTTTAAAACCGGCAATACTTAGTC 57.863 36.000 0.00 0.00 0.00 2.59
156 157 7.514784 AACTTTAAAACCGGCAATACTTAGT 57.485 32.000 0.00 0.00 0.00 2.24
157 158 9.550811 CTTAACTTTAAAACCGGCAATACTTAG 57.449 33.333 0.00 0.00 0.00 2.18
158 159 8.513774 CCTTAACTTTAAAACCGGCAATACTTA 58.486 33.333 0.00 0.00 0.00 2.24
159 160 7.372714 CCTTAACTTTAAAACCGGCAATACTT 58.627 34.615 0.00 0.00 0.00 2.24
160 161 6.071784 CCCTTAACTTTAAAACCGGCAATACT 60.072 38.462 0.00 0.00 0.00 2.12
161 162 6.072008 TCCCTTAACTTTAAAACCGGCAATAC 60.072 38.462 0.00 0.00 0.00 1.89
162 163 6.008960 TCCCTTAACTTTAAAACCGGCAATA 58.991 36.000 0.00 0.00 0.00 1.90
163 164 4.833938 TCCCTTAACTTTAAAACCGGCAAT 59.166 37.500 0.00 0.00 0.00 3.56
164 165 4.037803 GTCCCTTAACTTTAAAACCGGCAA 59.962 41.667 0.00 0.00 0.00 4.52
165 166 3.569277 GTCCCTTAACTTTAAAACCGGCA 59.431 43.478 0.00 0.00 0.00 5.69
166 167 3.822735 AGTCCCTTAACTTTAAAACCGGC 59.177 43.478 0.00 0.00 0.00 6.13
167 168 7.509141 TTTAGTCCCTTAACTTTAAAACCGG 57.491 36.000 0.00 0.00 0.00 5.28
168 169 9.006839 AGATTTAGTCCCTTAACTTTAAAACCG 57.993 33.333 0.00 0.00 0.00 4.44
177 178 9.433153 CGAAAGTTTAGATTTAGTCCCTTAACT 57.567 33.333 0.00 0.00 0.00 2.24
178 179 9.428097 TCGAAAGTTTAGATTTAGTCCCTTAAC 57.572 33.333 0.00 0.00 0.00 2.01
181 182 8.913487 TTTCGAAAGTTTAGATTTAGTCCCTT 57.087 30.769 6.47 0.00 0.00 3.95
182 183 8.373220 TCTTTCGAAAGTTTAGATTTAGTCCCT 58.627 33.333 31.29 0.00 37.31 4.20
183 184 8.543862 TCTTTCGAAAGTTTAGATTTAGTCCC 57.456 34.615 31.29 0.00 37.31 4.46
184 185 9.205719 ACTCTTTCGAAAGTTTAGATTTAGTCC 57.794 33.333 31.29 0.00 37.31 3.85
189 190 8.560374 CCTCAACTCTTTCGAAAGTTTAGATTT 58.440 33.333 31.29 13.88 37.31 2.17
190 191 7.173390 CCCTCAACTCTTTCGAAAGTTTAGATT 59.827 37.037 31.29 17.24 37.31 2.40
191 192 6.651225 CCCTCAACTCTTTCGAAAGTTTAGAT 59.349 38.462 31.29 17.03 37.31 1.98
192 193 5.989777 CCCTCAACTCTTTCGAAAGTTTAGA 59.010 40.000 31.29 23.50 37.31 2.10
193 194 5.989777 TCCCTCAACTCTTTCGAAAGTTTAG 59.010 40.000 31.29 24.54 37.31 1.85
194 195 5.756833 GTCCCTCAACTCTTTCGAAAGTTTA 59.243 40.000 31.29 15.82 37.31 2.01
195 196 4.575236 GTCCCTCAACTCTTTCGAAAGTTT 59.425 41.667 31.29 23.41 37.31 2.66
196 197 4.127907 GTCCCTCAACTCTTTCGAAAGTT 58.872 43.478 31.29 20.60 37.31 2.66
197 198 3.729966 GTCCCTCAACTCTTTCGAAAGT 58.270 45.455 31.29 16.12 37.31 2.66
198 199 2.731976 CGTCCCTCAACTCTTTCGAAAG 59.268 50.000 28.26 28.26 37.36 2.62
199 200 2.363038 TCGTCCCTCAACTCTTTCGAAA 59.637 45.455 10.71 10.71 0.00 3.46
200 201 1.958579 TCGTCCCTCAACTCTTTCGAA 59.041 47.619 0.00 0.00 0.00 3.71
201 202 1.612676 TCGTCCCTCAACTCTTTCGA 58.387 50.000 0.00 0.00 0.00 3.71
202 203 2.433868 TTCGTCCCTCAACTCTTTCG 57.566 50.000 0.00 0.00 0.00 3.46
203 204 5.690997 ATTTTTCGTCCCTCAACTCTTTC 57.309 39.130 0.00 0.00 0.00 2.62
204 205 8.101419 AGTATATTTTTCGTCCCTCAACTCTTT 58.899 33.333 0.00 0.00 0.00 2.52
205 206 7.621796 AGTATATTTTTCGTCCCTCAACTCTT 58.378 34.615 0.00 0.00 0.00 2.85
206 207 7.184067 AGTATATTTTTCGTCCCTCAACTCT 57.816 36.000 0.00 0.00 0.00 3.24
207 208 7.845066 AAGTATATTTTTCGTCCCTCAACTC 57.155 36.000 0.00 0.00 0.00 3.01
208 209 8.631480 AAAAGTATATTTTTCGTCCCTCAACT 57.369 30.769 0.41 0.00 0.00 3.16
209 210 9.338291 GAAAAAGTATATTTTTCGTCCCTCAAC 57.662 33.333 6.44 0.00 38.24 3.18
210 211 8.517056 GGAAAAAGTATATTTTTCGTCCCTCAA 58.483 33.333 15.68 0.00 44.81 3.02
211 212 7.886446 AGGAAAAAGTATATTTTTCGTCCCTCA 59.114 33.333 15.41 0.00 44.81 3.86
212 213 8.277490 AGGAAAAAGTATATTTTTCGTCCCTC 57.723 34.615 15.41 6.39 44.81 4.30
213 214 8.645814 AAGGAAAAAGTATATTTTTCGTCCCT 57.354 30.769 16.64 12.11 44.81 4.20
214 215 9.701098 AAAAGGAAAAAGTATATTTTTCGTCCC 57.299 29.630 16.64 10.71 44.81 4.46
244 245 9.929180 GCTCATCTACACCTTATGAATAATACA 57.071 33.333 0.00 0.00 0.00 2.29
247 248 8.031864 CGAGCTCATCTACACCTTATGAATAAT 58.968 37.037 15.40 0.00 0.00 1.28
248 249 7.371159 CGAGCTCATCTACACCTTATGAATAA 58.629 38.462 15.40 0.00 0.00 1.40
249 250 6.071896 CCGAGCTCATCTACACCTTATGAATA 60.072 42.308 15.40 0.00 0.00 1.75
250 251 5.279206 CCGAGCTCATCTACACCTTATGAAT 60.279 44.000 15.40 0.00 0.00 2.57
251 252 4.038042 CCGAGCTCATCTACACCTTATGAA 59.962 45.833 15.40 0.00 0.00 2.57
252 253 3.570125 CCGAGCTCATCTACACCTTATGA 59.430 47.826 15.40 0.00 0.00 2.15
253 254 3.305676 CCCGAGCTCATCTACACCTTATG 60.306 52.174 15.40 0.00 0.00 1.90
254 255 2.894126 CCCGAGCTCATCTACACCTTAT 59.106 50.000 15.40 0.00 0.00 1.73
255 256 2.092049 TCCCGAGCTCATCTACACCTTA 60.092 50.000 15.40 0.00 0.00 2.69
256 257 1.115467 CCCGAGCTCATCTACACCTT 58.885 55.000 15.40 0.00 0.00 3.50
257 258 0.259065 TCCCGAGCTCATCTACACCT 59.741 55.000 15.40 0.00 0.00 4.00
258 259 1.112113 TTCCCGAGCTCATCTACACC 58.888 55.000 15.40 0.00 0.00 4.16
259 260 1.202428 GGTTCCCGAGCTCATCTACAC 60.202 57.143 15.40 2.02 0.00 2.90
260 261 1.112113 GGTTCCCGAGCTCATCTACA 58.888 55.000 15.40 0.00 0.00 2.74
261 262 3.969995 GGTTCCCGAGCTCATCTAC 57.030 57.895 15.40 6.04 0.00 2.59
279 280 6.311445 CAGGAGATAACCAAATATCCGATTCG 59.689 42.308 0.00 0.00 41.28 3.34
280 281 7.162082 ACAGGAGATAACCAAATATCCGATTC 58.838 38.462 0.00 0.00 41.28 2.52
281 282 7.079451 ACAGGAGATAACCAAATATCCGATT 57.921 36.000 0.00 0.00 41.28 3.34
282 283 6.295916 GGACAGGAGATAACCAAATATCCGAT 60.296 42.308 0.00 0.00 41.28 4.18
283 284 5.011738 GGACAGGAGATAACCAAATATCCGA 59.988 44.000 0.00 0.00 41.28 4.55
284 285 5.238583 GGACAGGAGATAACCAAATATCCG 58.761 45.833 0.00 0.00 41.28 4.18
285 286 5.310857 AGGGACAGGAGATAACCAAATATCC 59.689 44.000 0.00 0.00 37.49 2.59
286 287 6.441088 AGGGACAGGAGATAACCAAATATC 57.559 41.667 0.00 0.00 33.35 1.63
287 288 6.621514 AGAAGGGACAGGAGATAACCAAATAT 59.378 38.462 0.00 0.00 0.00 1.28
288 289 5.970640 AGAAGGGACAGGAGATAACCAAATA 59.029 40.000 0.00 0.00 0.00 1.40
289 290 4.790790 AGAAGGGACAGGAGATAACCAAAT 59.209 41.667 0.00 0.00 0.00 2.32
290 291 4.175962 AGAAGGGACAGGAGATAACCAAA 58.824 43.478 0.00 0.00 0.00 3.28
291 292 3.803340 AGAAGGGACAGGAGATAACCAA 58.197 45.455 0.00 0.00 0.00 3.67
292 293 3.491766 AGAAGGGACAGGAGATAACCA 57.508 47.619 0.00 0.00 0.00 3.67
293 294 4.963628 AGTAAGAAGGGACAGGAGATAACC 59.036 45.833 0.00 0.00 0.00 2.85
294 295 7.657023 TTAGTAAGAAGGGACAGGAGATAAC 57.343 40.000 0.00 0.00 0.00 1.89
298 299 9.947189 TTAATATTAGTAAGAAGGGACAGGAGA 57.053 33.333 0.00 0.00 0.00 3.71
324 325 9.726438 AGCTAACAAGTTACTCATTTAACTCAT 57.274 29.630 0.00 0.00 40.69 2.90
325 326 9.204570 GAGCTAACAAGTTACTCATTTAACTCA 57.795 33.333 13.06 0.00 40.69 3.41
326 327 8.373992 CGAGCTAACAAGTTACTCATTTAACTC 58.626 37.037 15.83 0.00 40.69 3.01
327 328 8.086522 TCGAGCTAACAAGTTACTCATTTAACT 58.913 33.333 15.83 0.00 42.91 2.24
328 329 8.236084 TCGAGCTAACAAGTTACTCATTTAAC 57.764 34.615 15.83 0.00 32.88 2.01
329 330 8.086522 ACTCGAGCTAACAAGTTACTCATTTAA 58.913 33.333 13.61 0.00 0.00 1.52
330 331 7.600065 ACTCGAGCTAACAAGTTACTCATTTA 58.400 34.615 13.61 0.00 0.00 1.40
331 332 6.456501 ACTCGAGCTAACAAGTTACTCATTT 58.543 36.000 13.61 0.00 0.00 2.32
332 333 6.026947 ACTCGAGCTAACAAGTTACTCATT 57.973 37.500 13.61 0.00 0.00 2.57
333 334 5.183331 TGACTCGAGCTAACAAGTTACTCAT 59.817 40.000 13.61 0.00 0.00 2.90
334 335 4.517832 TGACTCGAGCTAACAAGTTACTCA 59.482 41.667 13.61 0.57 0.00 3.41
335 336 5.044428 TGACTCGAGCTAACAAGTTACTC 57.956 43.478 13.61 0.00 0.00 2.59
336 337 5.646577 ATGACTCGAGCTAACAAGTTACT 57.353 39.130 13.61 0.00 0.00 2.24
337 338 7.462988 GCTTAATGACTCGAGCTAACAAGTTAC 60.463 40.741 13.61 0.00 32.54 2.50
338 339 6.530534 GCTTAATGACTCGAGCTAACAAGTTA 59.469 38.462 13.61 2.64 32.54 2.24
339 340 5.348997 GCTTAATGACTCGAGCTAACAAGTT 59.651 40.000 13.61 3.51 32.54 2.66
340 341 4.865365 GCTTAATGACTCGAGCTAACAAGT 59.135 41.667 13.61 3.86 32.54 3.16
341 342 5.105752 AGCTTAATGACTCGAGCTAACAAG 58.894 41.667 13.61 11.72 43.21 3.16
342 343 5.073311 AGCTTAATGACTCGAGCTAACAA 57.927 39.130 13.61 0.73 43.21 2.83
343 344 4.720649 AGCTTAATGACTCGAGCTAACA 57.279 40.909 13.61 8.43 43.21 2.41
344 345 7.701809 AATAAGCTTAATGACTCGAGCTAAC 57.298 36.000 13.61 2.45 44.17 2.34
345 346 8.604035 CAAAATAAGCTTAATGACTCGAGCTAA 58.396 33.333 13.61 4.67 44.17 3.09
346 347 7.764443 ACAAAATAAGCTTAATGACTCGAGCTA 59.236 33.333 13.61 1.35 44.17 3.32
347 348 6.595716 ACAAAATAAGCTTAATGACTCGAGCT 59.404 34.615 13.61 0.00 46.71 4.09
348 349 6.776094 ACAAAATAAGCTTAATGACTCGAGC 58.224 36.000 13.61 6.11 35.42 5.03
351 352 8.985694 CGTTAACAAAATAAGCTTAATGACTCG 58.014 33.333 10.85 10.59 0.00 4.18
354 355 8.786028 GCTCGTTAACAAAATAAGCTTAATGAC 58.214 33.333 10.85 4.43 0.00 3.06
355 356 8.726988 AGCTCGTTAACAAAATAAGCTTAATGA 58.273 29.630 10.85 3.38 0.00 2.57
356 357 8.895932 AGCTCGTTAACAAAATAAGCTTAATG 57.104 30.769 10.85 12.16 0.00 1.90
357 358 7.903431 CGAGCTCGTTAACAAAATAAGCTTAAT 59.097 33.333 27.79 0.00 34.11 1.40
358 359 7.231607 CGAGCTCGTTAACAAAATAAGCTTAA 58.768 34.615 27.79 0.00 34.11 1.85
359 360 6.183360 CCGAGCTCGTTAACAAAATAAGCTTA 60.183 38.462 32.41 8.99 37.74 3.09
360 361 5.390567 CCGAGCTCGTTAACAAAATAAGCTT 60.391 40.000 32.41 3.48 37.74 3.74
361 362 4.092968 CCGAGCTCGTTAACAAAATAAGCT 59.907 41.667 32.41 8.93 37.74 3.74
362 363 4.092383 TCCGAGCTCGTTAACAAAATAAGC 59.908 41.667 32.41 4.53 37.74 3.09
363 364 5.773239 TCCGAGCTCGTTAACAAAATAAG 57.227 39.130 32.41 13.77 37.74 1.73
364 365 6.730960 AATCCGAGCTCGTTAACAAAATAA 57.269 33.333 32.41 5.40 37.74 1.40
365 366 6.812656 TGTAATCCGAGCTCGTTAACAAAATA 59.187 34.615 32.41 10.73 37.74 1.40
366 367 5.640357 TGTAATCCGAGCTCGTTAACAAAAT 59.360 36.000 32.41 11.02 37.74 1.82
367 368 4.989797 TGTAATCCGAGCTCGTTAACAAAA 59.010 37.500 32.41 10.04 37.74 2.44
368 369 4.558178 TGTAATCCGAGCTCGTTAACAAA 58.442 39.130 32.41 11.36 37.74 2.83
369 370 4.177165 TGTAATCCGAGCTCGTTAACAA 57.823 40.909 32.41 12.84 37.74 2.83
370 371 3.853831 TGTAATCCGAGCTCGTTAACA 57.146 42.857 32.41 25.37 37.74 2.41
371 372 3.421231 CGATGTAATCCGAGCTCGTTAAC 59.579 47.826 32.41 23.39 41.39 2.01
372 373 3.313249 TCGATGTAATCCGAGCTCGTTAA 59.687 43.478 32.41 18.85 41.39 2.01
373 374 2.874086 TCGATGTAATCCGAGCTCGTTA 59.126 45.455 32.41 22.39 41.39 3.18
374 375 1.674441 TCGATGTAATCCGAGCTCGTT 59.326 47.619 32.41 23.41 41.39 3.85
375 376 1.002684 GTCGATGTAATCCGAGCTCGT 60.003 52.381 32.41 18.26 41.39 4.18
376 377 1.264557 AGTCGATGTAATCCGAGCTCG 59.735 52.381 29.06 29.06 41.39 5.03
377 378 2.605823 CCAGTCGATGTAATCCGAGCTC 60.606 54.545 2.73 2.73 41.39 4.09
378 379 1.338337 CCAGTCGATGTAATCCGAGCT 59.662 52.381 0.00 0.00 41.39 4.09
379 380 1.337071 TCCAGTCGATGTAATCCGAGC 59.663 52.381 0.00 0.00 41.39 5.03
380 381 2.619177 AGTCCAGTCGATGTAATCCGAG 59.381 50.000 0.00 0.00 41.39 4.63
381 382 2.617308 GAGTCCAGTCGATGTAATCCGA 59.383 50.000 0.00 0.00 41.39 4.55
382 383 2.602456 CGAGTCCAGTCGATGTAATCCG 60.602 54.545 0.00 0.00 41.39 4.18
383 384 2.358267 ACGAGTCCAGTCGATGTAATCC 59.642 50.000 10.75 0.00 41.39 3.01
384 385 3.694535 ACGAGTCCAGTCGATGTAATC 57.305 47.619 10.75 0.00 42.85 1.75
385 386 4.639310 ACTAACGAGTCCAGTCGATGTAAT 59.361 41.667 10.75 0.00 42.85 1.89
386 387 4.005650 ACTAACGAGTCCAGTCGATGTAA 58.994 43.478 10.75 0.00 42.85 2.41
387 388 3.603532 ACTAACGAGTCCAGTCGATGTA 58.396 45.455 10.75 0.06 42.85 2.29
388 389 2.419324 GACTAACGAGTCCAGTCGATGT 59.581 50.000 10.75 5.96 45.61 3.06
389 390 3.054276 GACTAACGAGTCCAGTCGATG 57.946 52.381 10.75 3.15 45.61 3.84
402 403 2.473984 GGTTTGAACTCGTGGACTAACG 59.526 50.000 0.00 0.00 44.92 3.18
403 404 3.460103 TGGTTTGAACTCGTGGACTAAC 58.540 45.455 0.00 0.00 0.00 2.34
404 405 3.133362 ACTGGTTTGAACTCGTGGACTAA 59.867 43.478 0.00 0.00 0.00 2.24
405 406 2.696707 ACTGGTTTGAACTCGTGGACTA 59.303 45.455 0.00 0.00 0.00 2.59
406 407 1.485066 ACTGGTTTGAACTCGTGGACT 59.515 47.619 0.00 0.00 0.00 3.85
407 408 1.865340 GACTGGTTTGAACTCGTGGAC 59.135 52.381 0.00 0.00 0.00 4.02
408 409 1.537348 CGACTGGTTTGAACTCGTGGA 60.537 52.381 0.00 0.00 0.00 4.02
409 410 0.859232 CGACTGGTTTGAACTCGTGG 59.141 55.000 0.00 0.00 0.00 4.94
410 411 1.521423 GTCGACTGGTTTGAACTCGTG 59.479 52.381 8.70 0.00 0.00 4.35
411 412 1.537562 GGTCGACTGGTTTGAACTCGT 60.538 52.381 16.46 0.00 0.00 4.18
412 413 1.137513 GGTCGACTGGTTTGAACTCG 58.862 55.000 16.46 0.00 0.00 4.18
413 414 1.202604 TGGGTCGACTGGTTTGAACTC 60.203 52.381 16.46 0.00 0.00 3.01
414 415 0.834612 TGGGTCGACTGGTTTGAACT 59.165 50.000 16.46 0.00 0.00 3.01
415 416 1.602377 CTTGGGTCGACTGGTTTGAAC 59.398 52.381 16.46 0.00 0.00 3.18
416 417 1.210967 ACTTGGGTCGACTGGTTTGAA 59.789 47.619 16.46 0.00 0.00 2.69
417 418 0.834612 ACTTGGGTCGACTGGTTTGA 59.165 50.000 16.46 0.00 0.00 2.69
418 419 1.226746 GACTTGGGTCGACTGGTTTG 58.773 55.000 16.46 4.13 32.47 2.93
419 420 0.834612 TGACTTGGGTCGACTGGTTT 59.165 50.000 16.46 0.00 44.83 3.27
420 421 0.106149 GTGACTTGGGTCGACTGGTT 59.894 55.000 16.46 0.00 44.83 3.67
421 422 1.746517 GTGACTTGGGTCGACTGGT 59.253 57.895 16.46 9.00 44.83 4.00
422 423 1.372997 CGTGACTTGGGTCGACTGG 60.373 63.158 16.46 5.86 44.83 4.00
423 424 0.387367 CTCGTGACTTGGGTCGACTG 60.387 60.000 16.46 6.22 44.83 3.51
424 425 1.957562 CTCGTGACTTGGGTCGACT 59.042 57.895 16.46 0.00 44.83 4.18
425 426 1.733399 GCTCGTGACTTGGGTCGAC 60.733 63.158 7.13 7.13 44.83 4.20
426 427 0.607217 TAGCTCGTGACTTGGGTCGA 60.607 55.000 0.00 0.00 44.83 4.20
427 428 0.456312 GTAGCTCGTGACTTGGGTCG 60.456 60.000 0.00 0.00 44.83 4.79
428 429 0.889306 AGTAGCTCGTGACTTGGGTC 59.111 55.000 0.00 0.00 42.42 4.46
429 430 0.889306 GAGTAGCTCGTGACTTGGGT 59.111 55.000 0.00 0.00 0.00 4.51
430 431 3.723554 GAGTAGCTCGTGACTTGGG 57.276 57.895 0.00 0.00 0.00 4.12
455 456 8.715191 AAACTGAACTCTAATTAGCTCATGAG 57.285 34.615 18.84 18.84 0.00 2.90
456 457 7.766278 GGAAACTGAACTCTAATTAGCTCATGA 59.234 37.037 7.67 0.00 0.00 3.07
457 458 7.550551 TGGAAACTGAACTCTAATTAGCTCATG 59.449 37.037 7.67 7.08 0.00 3.07
458 459 7.624549 TGGAAACTGAACTCTAATTAGCTCAT 58.375 34.615 7.67 0.00 0.00 2.90
459 460 7.004555 TGGAAACTGAACTCTAATTAGCTCA 57.995 36.000 7.67 9.01 0.00 4.26
460 461 7.276878 GTCTGGAAACTGAACTCTAATTAGCTC 59.723 40.741 7.67 5.12 40.22 4.09
461 462 7.100409 GTCTGGAAACTGAACTCTAATTAGCT 58.900 38.462 7.67 0.00 40.22 3.32
462 463 6.314152 GGTCTGGAAACTGAACTCTAATTAGC 59.686 42.308 7.67 0.00 42.26 3.09
463 464 7.835634 GGTCTGGAAACTGAACTCTAATTAG 57.164 40.000 6.11 6.11 42.26 1.73
472 473 4.938226 CCTGATTAGGTCTGGAAACTGAAC 59.062 45.833 0.00 0.00 46.01 3.18
473 474 5.165961 CCTGATTAGGTCTGGAAACTGAA 57.834 43.478 0.00 0.00 46.01 3.02
474 475 4.826274 CCTGATTAGGTCTGGAAACTGA 57.174 45.455 0.00 0.00 46.01 3.41
481 482 3.493350 CCATTCGTCCTGATTAGGTCTGG 60.493 52.174 3.04 0.00 44.88 3.86
482 483 3.493350 CCCATTCGTCCTGATTAGGTCTG 60.493 52.174 3.04 0.00 44.88 3.51
483 484 2.700897 CCCATTCGTCCTGATTAGGTCT 59.299 50.000 3.04 0.00 44.88 3.85
484 485 2.434702 ACCCATTCGTCCTGATTAGGTC 59.565 50.000 3.04 0.00 44.88 3.85
485 486 2.478292 ACCCATTCGTCCTGATTAGGT 58.522 47.619 3.04 0.00 44.88 3.08
486 487 3.206150 CAACCCATTCGTCCTGATTAGG 58.794 50.000 0.00 0.00 46.06 2.69
487 488 2.614057 GCAACCCATTCGTCCTGATTAG 59.386 50.000 0.00 0.00 0.00 1.73
488 489 2.238646 AGCAACCCATTCGTCCTGATTA 59.761 45.455 0.00 0.00 0.00 1.75
489 490 1.004745 AGCAACCCATTCGTCCTGATT 59.995 47.619 0.00 0.00 0.00 2.57
490 491 0.620556 AGCAACCCATTCGTCCTGAT 59.379 50.000 0.00 0.00 0.00 2.90
491 492 0.400213 AAGCAACCCATTCGTCCTGA 59.600 50.000 0.00 0.00 0.00 3.86
492 493 0.804989 GAAGCAACCCATTCGTCCTG 59.195 55.000 0.00 0.00 0.00 3.86
493 494 0.673644 CGAAGCAACCCATTCGTCCT 60.674 55.000 0.00 0.00 42.47 3.85
494 495 1.644786 CCGAAGCAACCCATTCGTCC 61.645 60.000 6.58 0.00 45.17 4.79
495 496 1.794222 CCGAAGCAACCCATTCGTC 59.206 57.895 6.58 0.00 45.17 4.20
496 497 2.332654 GCCGAAGCAACCCATTCGT 61.333 57.895 6.58 0.00 45.17 3.85
497 498 2.485122 GCCGAAGCAACCCATTCG 59.515 61.111 0.57 0.57 45.96 3.34
529 530 0.102481 AAATGGAGGACGACGATCGG 59.898 55.000 20.98 4.82 45.59 4.18
610 611 0.643820 GTAGTGGTCGGCGAATTTCG 59.356 55.000 12.92 14.33 43.89 3.46
611 612 1.717194 TGTAGTGGTCGGCGAATTTC 58.283 50.000 12.92 0.00 0.00 2.17
612 613 2.277084 GATGTAGTGGTCGGCGAATTT 58.723 47.619 12.92 0.00 0.00 1.82
613 614 1.801395 CGATGTAGTGGTCGGCGAATT 60.801 52.381 12.92 0.00 34.39 2.17
614 615 0.248907 CGATGTAGTGGTCGGCGAAT 60.249 55.000 12.92 0.00 34.39 3.34
615 616 1.138036 CGATGTAGTGGTCGGCGAA 59.862 57.895 12.92 0.00 34.39 4.70
616 617 1.588824 AACGATGTAGTGGTCGGCGA 61.589 55.000 4.99 4.99 41.87 5.54
617 618 0.734942 AAACGATGTAGTGGTCGGCG 60.735 55.000 0.00 0.00 41.87 6.46
618 619 0.997196 GAAACGATGTAGTGGTCGGC 59.003 55.000 0.00 0.00 41.87 5.54
619 620 1.265568 CGAAACGATGTAGTGGTCGG 58.734 55.000 0.00 0.00 41.87 4.79
620 621 1.973138 ACGAAACGATGTAGTGGTCG 58.027 50.000 0.00 0.00 43.13 4.79
621 622 3.663493 GCAAACGAAACGATGTAGTGGTC 60.663 47.826 0.00 0.00 0.00 4.02
622 623 2.222445 GCAAACGAAACGATGTAGTGGT 59.778 45.455 0.00 0.00 0.00 4.16
623 624 2.412325 GGCAAACGAAACGATGTAGTGG 60.412 50.000 0.00 0.00 0.00 4.00
624 625 2.478894 AGGCAAACGAAACGATGTAGTG 59.521 45.455 0.00 0.00 0.00 2.74
625 626 2.478894 CAGGCAAACGAAACGATGTAGT 59.521 45.455 0.00 0.00 0.00 2.73
626 627 2.734606 TCAGGCAAACGAAACGATGTAG 59.265 45.455 0.00 0.00 0.00 2.74
627 628 2.477375 GTCAGGCAAACGAAACGATGTA 59.523 45.455 0.00 0.00 0.00 2.29
628 629 1.263217 GTCAGGCAAACGAAACGATGT 59.737 47.619 0.00 0.00 0.00 3.06
700 701 1.670087 GGATGAGTGAGTGACCACGTG 60.670 57.143 9.08 9.08 41.67 4.49
776 778 1.065709 TGACGGCCAGTTATCCCTTTC 60.066 52.381 2.24 0.00 0.00 2.62
1618 1672 7.208080 AGGATGACACTAACGGATAATTACAC 58.792 38.462 0.00 0.00 0.00 2.90
1628 1824 3.313012 TGTTGAGGATGACACTAACGG 57.687 47.619 0.00 0.00 0.00 4.44
1629 1825 4.494484 TGATGTTGAGGATGACACTAACG 58.506 43.478 0.00 0.00 0.00 3.18
1664 1862 5.786311 CCCCGTCCTCGTGATTTATTTATA 58.214 41.667 0.00 0.00 35.01 0.98
1687 1885 3.499737 CAGACAATGGGCCGACGC 61.500 66.667 0.00 0.00 0.00 5.19
1688 1886 2.819595 CCAGACAATGGGCCGACG 60.820 66.667 0.00 0.00 46.36 5.12
1696 1894 1.303888 ACCAGCTGCCCAGACAATG 60.304 57.895 8.66 0.00 0.00 2.82
1697 1895 1.303888 CACCAGCTGCCCAGACAAT 60.304 57.895 8.66 0.00 0.00 2.71
1698 1896 2.113774 CACCAGCTGCCCAGACAA 59.886 61.111 8.66 0.00 0.00 3.18
1699 1897 2.756042 AACACCAGCTGCCCAGACA 61.756 57.895 8.66 0.00 0.00 3.41
1700 1898 2.113986 AACACCAGCTGCCCAGAC 59.886 61.111 8.66 0.00 0.00 3.51
1701 1899 2.113774 CAACACCAGCTGCCCAGA 59.886 61.111 8.66 0.00 0.00 3.86
1702 1900 3.677648 GCAACACCAGCTGCCCAG 61.678 66.667 8.66 0.00 30.67 4.45
1703 1901 4.208403 AGCAACACCAGCTGCCCA 62.208 61.111 8.66 0.00 41.61 5.36
1708 1906 2.596631 CTGGCAGCAACACCAGCT 60.597 61.111 0.00 0.00 46.50 4.24
1713 1911 3.982241 GTGGGCTGGCAGCAACAC 61.982 66.667 34.57 34.57 44.75 3.32
1714 1912 2.350511 TAAGTGGGCTGGCAGCAACA 62.351 55.000 37.49 31.18 44.75 3.33
1715 1913 1.178534 TTAAGTGGGCTGGCAGCAAC 61.179 55.000 37.49 32.02 44.75 4.17
1716 1914 0.895100 CTTAAGTGGGCTGGCAGCAA 60.895 55.000 37.49 23.99 44.75 3.91
1717 1915 1.303561 CTTAAGTGGGCTGGCAGCA 60.304 57.895 37.49 18.52 44.75 4.41
1718 1916 0.895559 AACTTAAGTGGGCTGGCAGC 60.896 55.000 30.93 30.93 41.46 5.25
1719 1917 1.168714 GAACTTAAGTGGGCTGGCAG 58.831 55.000 10.94 10.94 0.00 4.85
1720 1918 0.605319 CGAACTTAAGTGGGCTGGCA 60.605 55.000 9.34 0.00 0.00 4.92
1721 1919 0.321298 TCGAACTTAAGTGGGCTGGC 60.321 55.000 9.34 0.00 0.00 4.85
1722 1920 1.002087 ACTCGAACTTAAGTGGGCTGG 59.998 52.381 9.34 0.00 0.00 4.85
1723 1921 2.338500 GACTCGAACTTAAGTGGGCTG 58.662 52.381 9.34 1.99 0.00 4.85
1724 1922 1.275573 GGACTCGAACTTAAGTGGGCT 59.724 52.381 9.34 0.00 0.00 5.19
1725 1923 1.275573 AGGACTCGAACTTAAGTGGGC 59.724 52.381 9.34 2.38 0.00 5.36
1726 1924 2.353803 CCAGGACTCGAACTTAAGTGGG 60.354 54.545 9.34 4.36 0.00 4.61
1727 1925 2.299297 ACCAGGACTCGAACTTAAGTGG 59.701 50.000 9.34 5.20 0.00 4.00
1728 1926 3.662247 ACCAGGACTCGAACTTAAGTG 57.338 47.619 9.34 0.00 0.00 3.16
1729 1927 4.377897 CAAACCAGGACTCGAACTTAAGT 58.622 43.478 1.12 1.12 0.00 2.24
1730 1928 3.746492 CCAAACCAGGACTCGAACTTAAG 59.254 47.826 0.00 0.00 0.00 1.85
1731 1929 3.388676 TCCAAACCAGGACTCGAACTTAA 59.611 43.478 0.00 0.00 31.23 1.85
1732 1930 2.967201 TCCAAACCAGGACTCGAACTTA 59.033 45.455 0.00 0.00 31.23 2.24
1733 1931 1.766496 TCCAAACCAGGACTCGAACTT 59.234 47.619 0.00 0.00 31.23 2.66
1734 1932 1.420430 TCCAAACCAGGACTCGAACT 58.580 50.000 0.00 0.00 31.23 3.01
1742 1940 2.107041 ATCGCGTGTCCAAACCAGGA 62.107 55.000 5.77 0.00 34.64 3.86
1743 1941 1.671054 ATCGCGTGTCCAAACCAGG 60.671 57.895 5.77 0.00 0.00 4.45
1744 1942 1.497278 CATCGCGTGTCCAAACCAG 59.503 57.895 5.77 0.00 0.00 4.00
1745 1943 2.612567 GCATCGCGTGTCCAAACCA 61.613 57.895 5.77 0.00 0.00 3.67
1746 1944 2.175811 GCATCGCGTGTCCAAACC 59.824 61.111 5.77 0.00 0.00 3.27
1747 1945 1.132640 GAGCATCGCGTGTCCAAAC 59.867 57.895 5.77 0.00 0.00 2.93
1748 1946 3.561429 GAGCATCGCGTGTCCAAA 58.439 55.556 5.77 0.00 0.00 3.28
1805 2003 2.309136 AAATGAGACCAACCCAAGGG 57.691 50.000 2.91 2.91 42.03 3.95
1806 2004 7.660030 ATTTATAAATGAGACCAACCCAAGG 57.340 36.000 9.93 0.00 0.00 3.61
1876 2074 8.738199 TGCTAGCACGTACTTTATTGATATAC 57.262 34.615 14.93 0.00 0.00 1.47
1895 2096 5.120830 GTGGCTGTGTATATACATTGCTAGC 59.879 44.000 26.98 23.21 38.63 3.42
1911 2112 2.890311 TGTCCTAAATTTGGTGGCTGTG 59.110 45.455 0.00 0.00 0.00 3.66
1912 2113 3.237268 TGTCCTAAATTTGGTGGCTGT 57.763 42.857 0.00 0.00 0.00 4.40
1921 2122 6.887545 TGTAACCGGAATCATGTCCTAAATTT 59.112 34.615 9.46 0.00 35.31 1.82
1923 2124 5.996644 TGTAACCGGAATCATGTCCTAAAT 58.003 37.500 9.46 0.00 35.31 1.40
1927 2128 3.992943 TTGTAACCGGAATCATGTCCT 57.007 42.857 9.46 0.00 35.31 3.85
1935 2161 6.372103 TGTTCGAACATATTTGTAACCGGAAT 59.628 34.615 26.53 0.00 34.06 3.01
1936 2162 5.699915 TGTTCGAACATATTTGTAACCGGAA 59.300 36.000 26.53 0.00 34.06 4.30
2031 2258 9.445786 ACTCGTGTTTGTTTATGTTTTATTCTG 57.554 29.630 0.00 0.00 0.00 3.02
2036 2263 9.666626 CCATAACTCGTGTTTGTTTATGTTTTA 57.333 29.630 8.32 0.00 37.59 1.52
2047 2274 6.526674 GGCTAAATTTCCATAACTCGTGTTTG 59.473 38.462 8.32 6.82 37.59 2.93
2054 2281 6.122964 AGTCCAGGCTAAATTTCCATAACTC 58.877 40.000 0.00 0.00 0.00 3.01
2062 2289 3.129462 GCTCCAAGTCCAGGCTAAATTTC 59.871 47.826 0.00 0.00 0.00 2.17
2063 2290 3.092301 GCTCCAAGTCCAGGCTAAATTT 58.908 45.455 0.00 0.00 0.00 1.82
2066 2293 0.328258 GGCTCCAAGTCCAGGCTAAA 59.672 55.000 0.00 0.00 32.47 1.85
2068 2295 1.995626 GGGCTCCAAGTCCAGGCTA 60.996 63.158 0.00 0.00 40.51 3.93
2069 2296 3.334054 GGGCTCCAAGTCCAGGCT 61.334 66.667 0.00 0.00 40.51 4.58
2093 2320 1.202770 ACGCTTTTAGCCACACCTTCT 60.203 47.619 0.00 0.00 38.18 2.85
2094 2321 1.235724 ACGCTTTTAGCCACACCTTC 58.764 50.000 0.00 0.00 38.18 3.46
2095 2322 1.336755 CAACGCTTTTAGCCACACCTT 59.663 47.619 0.00 0.00 38.18 3.50
2097 2324 0.948678 TCAACGCTTTTAGCCACACC 59.051 50.000 0.00 0.00 38.18 4.16
2099 2326 1.669604 TGTCAACGCTTTTAGCCACA 58.330 45.000 0.00 0.00 38.18 4.17
2112 2339 4.678287 CAGCTTTCATTGTCACATGTCAAC 59.322 41.667 0.00 0.00 0.00 3.18
2127 2354 1.945819 GCCCGAAGACATCAGCTTTCA 60.946 52.381 0.00 0.00 0.00 2.69
2128 2355 0.729690 GCCCGAAGACATCAGCTTTC 59.270 55.000 0.00 0.00 0.00 2.62
2132 2359 2.629050 TAGCGCCCGAAGACATCAGC 62.629 60.000 2.29 0.00 0.00 4.26
2133 2360 0.596083 CTAGCGCCCGAAGACATCAG 60.596 60.000 2.29 0.00 0.00 2.90
2135 2362 0.315568 ATCTAGCGCCCGAAGACATC 59.684 55.000 2.29 0.00 0.00 3.06
2140 2367 3.654414 AGAATAAATCTAGCGCCCGAAG 58.346 45.455 2.29 0.00 36.32 3.79
2141 2368 3.746045 AGAATAAATCTAGCGCCCGAA 57.254 42.857 2.29 0.00 36.32 4.30
2154 2381 7.041372 CCGAGAGACAAGGTTTCAAAGAATAAA 60.041 37.037 0.00 0.00 0.00 1.40
2173 2401 2.388526 ATGATGGGATGACCGAGAGA 57.611 50.000 0.00 0.00 44.64 3.10
2174 2402 2.893489 TGTATGATGGGATGACCGAGAG 59.107 50.000 0.00 0.00 44.64 3.20
2195 2423 7.775053 TTCCTAAAAGCAATAAGTCCATTGT 57.225 32.000 0.00 0.00 38.04 2.71
2220 2448 2.838637 TTGGTGGTGAGTCCCTTTTT 57.161 45.000 0.00 0.00 34.77 1.94
2230 2458 9.403583 GACCTAATCTTATTAAATTGGTGGTGA 57.596 33.333 0.00 0.00 0.00 4.02
2233 2461 8.671384 TCGACCTAATCTTATTAAATTGGTGG 57.329 34.615 0.00 0.00 0.00 4.61
2276 2504 6.207810 TGGTATTTGTGTTTTATGGTGTCTCC 59.792 38.462 0.00 0.00 0.00 3.71
2353 3122 2.213499 CCATCGCCAAGAGGTATTGTC 58.787 52.381 0.00 0.00 37.19 3.18
2355 3124 2.332063 ACCATCGCCAAGAGGTATTG 57.668 50.000 0.00 0.00 37.19 1.90
2406 3175 2.988010 ACTGAATAAGATGCGGCTCA 57.012 45.000 0.00 0.00 0.00 4.26
2412 3181 4.444388 TCGACGCATAACTGAATAAGATGC 59.556 41.667 0.00 0.00 39.59 3.91
2424 3193 4.336532 AGAAATTTGGTCGACGCATAAC 57.663 40.909 9.92 0.00 0.00 1.89
2426 3195 4.509970 CCATAGAAATTTGGTCGACGCATA 59.490 41.667 9.92 4.70 0.00 3.14
2427 3196 3.312421 CCATAGAAATTTGGTCGACGCAT 59.688 43.478 9.92 0.00 0.00 4.73
2429 3198 2.933906 TCCATAGAAATTTGGTCGACGC 59.066 45.455 9.92 3.20 34.48 5.19
2430 3199 4.181578 ACTCCATAGAAATTTGGTCGACG 58.818 43.478 9.92 0.00 34.48 5.12
2442 3211 4.968719 TCTCCCTAATGCAACTCCATAGAA 59.031 41.667 0.00 0.00 0.00 2.10
2446 3215 3.387962 TCTCTCCCTAATGCAACTCCAT 58.612 45.455 0.00 0.00 0.00 3.41
2447 3216 2.832838 TCTCTCCCTAATGCAACTCCA 58.167 47.619 0.00 0.00 0.00 3.86
2453 3222 2.852449 ACCCAAATCTCTCCCTAATGCA 59.148 45.455 0.00 0.00 0.00 3.96
2480 3249 1.824230 CCTGAGAAGAGTGGAGTCCTG 59.176 57.143 11.33 0.00 0.00 3.86
2481 3250 1.713647 TCCTGAGAAGAGTGGAGTCCT 59.286 52.381 11.33 0.00 0.00 3.85
2486 3255 4.476846 ACTCTAGATCCTGAGAAGAGTGGA 59.523 45.833 16.48 0.00 43.90 4.02
2529 3304 5.714806 CCTTTCAAGCCATTCTAGGGTTTTA 59.285 40.000 0.00 0.00 46.59 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.