Multiple sequence alignment - TraesCS4D01G259600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G259600 chr4D 100.000 4370 0 0 1 4370 428950469 428946100 0.000000e+00 8070.0
1 TraesCS4D01G259600 chr4D 88.235 51 6 0 1 51 121808881 121808831 1.310000e-05 62.1
2 TraesCS4D01G259600 chr4A 97.350 2604 63 5 1319 3921 37310782 37313380 0.000000e+00 4421.0
3 TraesCS4D01G259600 chr4A 97.297 407 11 0 873 1279 37310109 37310515 0.000000e+00 691.0
4 TraesCS4D01G259600 chr4A 87.879 528 40 11 246 755 37309478 37309999 2.250000e-167 599.0
5 TraesCS4D01G259600 chr4A 85.385 260 23 6 4113 4370 37313377 37313623 5.610000e-64 255.0
6 TraesCS4D01G259600 chr4A 97.059 34 1 0 18 51 60737279 60737312 1.700000e-04 58.4
7 TraesCS4D01G259600 chr4B 96.399 2527 80 8 1398 3921 526267992 526270510 0.000000e+00 4152.0
8 TraesCS4D01G259600 chr4B 96.552 435 14 1 862 1295 526267102 526267536 0.000000e+00 719.0
9 TraesCS4D01G259600 chr4B 83.832 501 47 7 61 552 526266325 526266800 3.100000e-121 446.0
10 TraesCS4D01G259600 chr4B 92.199 141 9 2 3975 4115 604533764 604533626 9.590000e-47 198.0
11 TraesCS4D01G259600 chr4B 82.684 231 11 8 535 755 526266813 526267024 1.250000e-40 178.0
12 TraesCS4D01G259600 chr4B 90.385 52 4 1 4319 4370 526270817 526270867 2.820000e-07 67.6
13 TraesCS4D01G259600 chr6D 99.167 120 1 0 3974 4093 136474597 136474716 2.650000e-52 217.0
14 TraesCS4D01G259600 chr3B 99.167 120 1 0 3973 4092 556520784 556520665 2.650000e-52 217.0
15 TraesCS4D01G259600 chr3B 83.065 124 15 3 401 524 158707616 158707499 1.660000e-19 108.0
16 TraesCS4D01G259600 chr2D 100.000 117 0 0 3975 4091 95519658 95519542 2.650000e-52 217.0
17 TraesCS4D01G259600 chr2D 97.600 125 3 0 3967 4091 572692610 572692734 9.520000e-52 215.0
18 TraesCS4D01G259600 chr7B 99.160 119 1 0 3974 4092 252178173 252178055 9.520000e-52 215.0
19 TraesCS4D01G259600 chr7B 93.617 141 7 1 3972 4112 506726672 506726810 4.430000e-50 209.0
20 TraesCS4D01G259600 chr2B 96.825 126 3 1 3967 4092 576683188 576683064 4.430000e-50 209.0
21 TraesCS4D01G259600 chr2B 78.882 161 26 4 364 524 566624968 566624816 7.730000e-18 102.0
22 TraesCS4D01G259600 chr5B 91.275 149 10 3 3974 4119 270679532 270679384 2.670000e-47 200.0
23 TraesCS4D01G259600 chr7D 82.209 163 22 3 363 524 265692987 265692831 2.740000e-27 134.0
24 TraesCS4D01G259600 chr7D 85.000 120 18 0 117 236 561665407 561665288 5.940000e-24 122.0
25 TraesCS4D01G259600 chr6B 84.553 123 11 4 383 505 345218691 345218577 9.930000e-22 115.0
26 TraesCS4D01G259600 chr7A 81.022 137 25 1 100 236 706266396 706266531 1.660000e-19 108.0
27 TraesCS4D01G259600 chr5A 82.677 127 13 6 382 507 706500504 706500386 2.150000e-18 104.0
28 TraesCS4D01G259600 chr1D 80.556 144 19 5 382 525 372837351 372837485 7.730000e-18 102.0
29 TraesCS4D01G259600 chr2A 77.640 161 28 3 364 524 625025812 625025660 1.670000e-14 91.6
30 TraesCS4D01G259600 chr1B 90.566 53 1 2 1 51 6458795 6458745 2.820000e-07 67.6
31 TraesCS4D01G259600 chr1B 97.436 39 1 0 3919 3957 127297161 127297199 2.820000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G259600 chr4D 428946100 428950469 4369 True 8070.00 8070 100.00000 1 4370 1 chr4D.!!$R2 4369
1 TraesCS4D01G259600 chr4A 37309478 37313623 4145 False 1491.50 4421 91.97775 246 4370 4 chr4A.!!$F2 4124
2 TraesCS4D01G259600 chr4B 526266325 526270867 4542 False 1112.52 4152 89.97040 61 4370 5 chr4B.!!$F1 4309

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
857 1031 0.119155 ACCATGTCCTCTCTTCCCCA 59.881 55.000 0.0 0.0 0.0 4.96 F
858 1032 0.835941 CCATGTCCTCTCTTCCCCAG 59.164 60.000 0.0 0.0 0.0 4.45 F
2041 2568 1.003118 TGTTGCCTGATGTAGTGACCC 59.997 52.381 0.0 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2286 2813 2.029560 TGCAAATGCTTTGGCGACATTA 60.030 40.909 6.97 0.0 40.71 1.90 R
2449 2976 3.276857 CTGTGCCATAGCTGACTTCATT 58.723 45.455 0.00 0.0 40.80 2.57 R
3971 4500 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.000 9.76 0.0 39.76 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.599343 CTCAATTGAATGTCGACCCTCA 58.401 45.455 14.12 12.58 0.00 3.86
22 23 4.002982 CTCAATTGAATGTCGACCCTCAA 58.997 43.478 23.66 23.66 32.67 3.02
23 24 4.393834 TCAATTGAATGTCGACCCTCAAA 58.606 39.130 24.65 12.08 31.94 2.69
24 25 4.824537 TCAATTGAATGTCGACCCTCAAAA 59.175 37.500 24.65 14.85 31.94 2.44
25 26 5.300539 TCAATTGAATGTCGACCCTCAAAAA 59.699 36.000 24.65 14.61 31.94 1.94
26 27 4.561735 TTGAATGTCGACCCTCAAAAAC 57.438 40.909 20.87 2.84 0.00 2.43
27 28 3.815809 TGAATGTCGACCCTCAAAAACT 58.184 40.909 14.12 0.00 0.00 2.66
28 29 4.963373 TGAATGTCGACCCTCAAAAACTA 58.037 39.130 14.12 0.00 0.00 2.24
29 30 4.994852 TGAATGTCGACCCTCAAAAACTAG 59.005 41.667 14.12 0.00 0.00 2.57
30 31 3.396260 TGTCGACCCTCAAAAACTAGG 57.604 47.619 14.12 0.00 0.00 3.02
39 40 5.167303 CCTCAAAAACTAGGGAGCTTAGT 57.833 43.478 0.00 0.00 32.90 2.24
40 41 4.938226 CCTCAAAAACTAGGGAGCTTAGTG 59.062 45.833 0.00 0.00 31.96 2.74
41 42 5.513267 CCTCAAAAACTAGGGAGCTTAGTGT 60.513 44.000 0.00 0.00 31.96 3.55
42 43 5.937111 TCAAAAACTAGGGAGCTTAGTGTT 58.063 37.500 0.00 0.00 31.46 3.32
43 44 7.069877 TCAAAAACTAGGGAGCTTAGTGTTA 57.930 36.000 0.82 0.00 30.31 2.41
44 45 7.686434 TCAAAAACTAGGGAGCTTAGTGTTAT 58.314 34.615 0.82 0.00 30.31 1.89
45 46 8.818860 TCAAAAACTAGGGAGCTTAGTGTTATA 58.181 33.333 0.82 0.00 30.31 0.98
46 47 9.444600 CAAAAACTAGGGAGCTTAGTGTTATAA 57.555 33.333 0.82 0.00 30.31 0.98
48 49 9.668497 AAAACTAGGGAGCTTAGTGTTATAAAG 57.332 33.333 0.00 0.00 29.02 1.85
49 50 7.362802 ACTAGGGAGCTTAGTGTTATAAAGG 57.637 40.000 0.00 0.00 30.46 3.11
50 51 7.130775 ACTAGGGAGCTTAGTGTTATAAAGGA 58.869 38.462 0.00 0.00 30.46 3.36
51 52 6.236558 AGGGAGCTTAGTGTTATAAAGGAC 57.763 41.667 0.00 0.00 0.00 3.85
52 53 5.965091 AGGGAGCTTAGTGTTATAAAGGACT 59.035 40.000 0.00 0.00 0.00 3.85
53 54 6.444171 AGGGAGCTTAGTGTTATAAAGGACTT 59.556 38.462 0.00 0.00 0.00 3.01
54 55 6.539103 GGGAGCTTAGTGTTATAAAGGACTTG 59.461 42.308 0.00 0.00 0.00 3.16
55 56 7.328737 GGAGCTTAGTGTTATAAAGGACTTGA 58.671 38.462 0.00 0.00 0.00 3.02
56 57 7.988028 GGAGCTTAGTGTTATAAAGGACTTGAT 59.012 37.037 0.00 0.00 0.00 2.57
57 58 8.723942 AGCTTAGTGTTATAAAGGACTTGATG 57.276 34.615 0.00 0.00 0.00 3.07
58 59 8.540388 AGCTTAGTGTTATAAAGGACTTGATGA 58.460 33.333 0.00 0.00 0.00 2.92
59 60 8.604890 GCTTAGTGTTATAAAGGACTTGATGAC 58.395 37.037 0.00 0.00 0.00 3.06
69 70 4.248859 AGGACTTGATGACTCACAAATCG 58.751 43.478 0.00 0.00 0.00 3.34
84 85 8.033038 ACTCACAAATCGAAGTAGTTATTAGCA 58.967 33.333 0.00 0.00 0.00 3.49
139 141 1.212616 GAAGACGCCTTCATCATCCG 58.787 55.000 6.60 0.00 46.18 4.18
146 148 0.671781 CCTTCATCATCCGATCCCGC 60.672 60.000 0.00 0.00 0.00 6.13
159 161 1.340248 GATCCCGCGAATCTGAGGTTA 59.660 52.381 8.23 0.00 0.00 2.85
170 172 0.175989 CTGAGGTTACCTTCCGGAGC 59.824 60.000 4.99 0.00 31.76 4.70
176 178 2.529389 ACCTTCCGGAGCCAAGGT 60.529 61.111 18.18 18.18 46.41 3.50
178 180 2.125512 CTTCCGGAGCCAAGGTCG 60.126 66.667 3.34 0.00 0.00 4.79
179 181 4.388499 TTCCGGAGCCAAGGTCGC 62.388 66.667 3.34 0.00 0.00 5.19
190 192 4.698625 AGGTCGCGGGAAGAGGGT 62.699 66.667 6.13 0.00 0.00 4.34
191 193 2.757099 GGTCGCGGGAAGAGGGTA 60.757 66.667 6.13 0.00 0.00 3.69
194 196 2.441532 CGCGGGAAGAGGGTAGGA 60.442 66.667 0.00 0.00 0.00 2.94
225 231 2.079158 TCAGCGATGCTTCCAAGAAAG 58.921 47.619 0.00 0.00 36.40 2.62
227 233 2.095532 CAGCGATGCTTCCAAGAAAGAG 59.904 50.000 0.00 0.00 36.40 2.85
234 240 4.152625 CCAAGAAAGAGCGCGGCG 62.153 66.667 19.62 19.62 0.00 6.46
394 422 6.397831 TTGTTCACCGTTATAAGATGTTCG 57.602 37.500 0.00 0.00 0.00 3.95
396 424 6.334989 TGTTCACCGTTATAAGATGTTCGAT 58.665 36.000 0.00 0.00 0.00 3.59
397 425 6.814644 TGTTCACCGTTATAAGATGTTCGATT 59.185 34.615 0.00 0.00 0.00 3.34
495 528 7.944061 TGCAGTCCATATTGAAATATCCAAAG 58.056 34.615 0.00 0.00 29.35 2.77
499 532 9.812347 AGTCCATATTGAAATATCCAAAGCATA 57.188 29.630 0.00 0.00 29.35 3.14
648 711 3.099141 CAACCAGCCTCCATAATTTGGT 58.901 45.455 6.57 0.00 46.52 3.67
735 812 2.161609 GGTAGCGTGGTCCAATTTCTTG 59.838 50.000 0.00 0.00 0.00 3.02
767 941 1.181786 GGAGTCCACCAGAGTCTCAG 58.818 60.000 3.60 0.00 43.52 3.35
770 944 0.902516 GTCCACCAGAGTCTCAGGCT 60.903 60.000 11.09 0.00 0.00 4.58
774 948 0.407528 ACCAGAGTCTCAGGCTCTCA 59.592 55.000 5.58 0.00 40.97 3.27
776 950 0.457035 CAGAGTCTCAGGCTCTCAGC 59.543 60.000 5.58 0.00 40.97 4.26
777 951 1.031571 AGAGTCTCAGGCTCTCAGCG 61.032 60.000 1.76 0.00 43.62 5.18
778 952 2.003658 GAGTCTCAGGCTCTCAGCGG 62.004 65.000 0.00 0.00 43.62 5.52
779 953 2.757508 TCTCAGGCTCTCAGCGGG 60.758 66.667 0.00 0.00 43.62 6.13
780 954 4.527583 CTCAGGCTCTCAGCGGGC 62.528 72.222 0.00 0.00 43.62 6.13
782 956 4.093291 CAGGCTCTCAGCGGGCTT 62.093 66.667 0.00 0.00 43.62 4.35
783 957 3.780173 AGGCTCTCAGCGGGCTTC 61.780 66.667 0.00 0.00 43.62 3.86
784 958 4.087892 GGCTCTCAGCGGGCTTCA 62.088 66.667 0.00 0.00 43.62 3.02
785 959 2.817396 GCTCTCAGCGGGCTTCAC 60.817 66.667 0.00 0.00 0.00 3.18
786 960 2.125350 CTCTCAGCGGGCTTCACC 60.125 66.667 0.00 0.00 37.93 4.02
787 961 2.604686 TCTCAGCGGGCTTCACCT 60.605 61.111 0.00 0.00 39.10 4.00
788 962 2.177594 CTCTCAGCGGGCTTCACCTT 62.178 60.000 0.00 0.00 39.10 3.50
789 963 1.743252 CTCAGCGGGCTTCACCTTC 60.743 63.158 0.00 0.00 39.10 3.46
790 964 2.032528 CAGCGGGCTTCACCTTCA 59.967 61.111 0.00 0.00 39.10 3.02
791 965 1.377725 CAGCGGGCTTCACCTTCAT 60.378 57.895 0.00 0.00 39.10 2.57
792 966 1.377725 AGCGGGCTTCACCTTCATG 60.378 57.895 0.00 0.00 39.10 3.07
793 967 1.675641 GCGGGCTTCACCTTCATGT 60.676 57.895 0.00 0.00 39.10 3.21
794 968 1.648467 GCGGGCTTCACCTTCATGTC 61.648 60.000 0.00 0.00 39.10 3.06
795 969 1.026718 CGGGCTTCACCTTCATGTCC 61.027 60.000 0.00 0.00 39.10 4.02
796 970 0.329596 GGGCTTCACCTTCATGTCCT 59.670 55.000 0.00 0.00 39.10 3.85
797 971 1.680249 GGGCTTCACCTTCATGTCCTC 60.680 57.143 0.00 0.00 39.10 3.71
798 972 1.280421 GGCTTCACCTTCATGTCCTCT 59.720 52.381 0.00 0.00 34.51 3.69
799 973 2.626840 GCTTCACCTTCATGTCCTCTC 58.373 52.381 0.00 0.00 0.00 3.20
800 974 2.235898 GCTTCACCTTCATGTCCTCTCT 59.764 50.000 0.00 0.00 0.00 3.10
801 975 3.307339 GCTTCACCTTCATGTCCTCTCTT 60.307 47.826 0.00 0.00 0.00 2.85
802 976 4.805609 GCTTCACCTTCATGTCCTCTCTTT 60.806 45.833 0.00 0.00 0.00 2.52
803 977 4.982241 TCACCTTCATGTCCTCTCTTTT 57.018 40.909 0.00 0.00 0.00 2.27
804 978 4.899502 TCACCTTCATGTCCTCTCTTTTC 58.100 43.478 0.00 0.00 0.00 2.29
805 979 4.006319 CACCTTCATGTCCTCTCTTTTCC 58.994 47.826 0.00 0.00 0.00 3.13
806 980 3.009584 ACCTTCATGTCCTCTCTTTTCCC 59.990 47.826 0.00 0.00 0.00 3.97
807 981 3.615155 CTTCATGTCCTCTCTTTTCCCC 58.385 50.000 0.00 0.00 0.00 4.81
808 982 1.555075 TCATGTCCTCTCTTTTCCCCG 59.445 52.381 0.00 0.00 0.00 5.73
809 983 0.253327 ATGTCCTCTCTTTTCCCCGC 59.747 55.000 0.00 0.00 0.00 6.13
810 984 1.078356 GTCCTCTCTTTTCCCCGCC 60.078 63.158 0.00 0.00 0.00 6.13
811 985 2.125106 CCTCTCTTTTCCCCGCCG 60.125 66.667 0.00 0.00 0.00 6.46
812 986 2.663196 CTCTCTTTTCCCCGCCGT 59.337 61.111 0.00 0.00 0.00 5.68
813 987 1.003718 CTCTCTTTTCCCCGCCGTT 60.004 57.895 0.00 0.00 0.00 4.44
814 988 1.298859 CTCTCTTTTCCCCGCCGTTG 61.299 60.000 0.00 0.00 0.00 4.10
815 989 2.281900 TCTTTTCCCCGCCGTTGG 60.282 61.111 0.00 0.00 0.00 3.77
834 1008 3.297620 CCACAGCCCACAGCCAAC 61.298 66.667 0.00 0.00 45.47 3.77
835 1009 2.519063 CACAGCCCACAGCCAACA 60.519 61.111 0.00 0.00 45.47 3.33
836 1010 2.519302 ACAGCCCACAGCCAACAC 60.519 61.111 0.00 0.00 45.47 3.32
837 1011 3.297620 CAGCCCACAGCCAACACC 61.298 66.667 0.00 0.00 45.47 4.16
838 1012 3.819652 AGCCCACAGCCAACACCA 61.820 61.111 0.00 0.00 45.47 4.17
839 1013 3.605664 GCCCACAGCCAACACCAC 61.606 66.667 0.00 0.00 34.35 4.16
840 1014 2.912025 CCCACAGCCAACACCACC 60.912 66.667 0.00 0.00 0.00 4.61
841 1015 2.123939 CCACAGCCAACACCACCA 60.124 61.111 0.00 0.00 0.00 4.17
842 1016 1.531365 CCACAGCCAACACCACCAT 60.531 57.895 0.00 0.00 0.00 3.55
843 1017 1.661480 CACAGCCAACACCACCATG 59.339 57.895 0.00 0.00 0.00 3.66
844 1018 1.108727 CACAGCCAACACCACCATGT 61.109 55.000 0.00 0.00 0.00 3.21
845 1019 0.823356 ACAGCCAACACCACCATGTC 60.823 55.000 0.00 0.00 30.55 3.06
846 1020 1.228552 AGCCAACACCACCATGTCC 60.229 57.895 0.00 0.00 30.55 4.02
847 1021 1.228552 GCCAACACCACCATGTCCT 60.229 57.895 0.00 0.00 30.55 3.85
848 1022 1.244019 GCCAACACCACCATGTCCTC 61.244 60.000 0.00 0.00 30.55 3.71
849 1023 0.401738 CCAACACCACCATGTCCTCT 59.598 55.000 0.00 0.00 30.55 3.69
850 1024 1.611673 CCAACACCACCATGTCCTCTC 60.612 57.143 0.00 0.00 30.55 3.20
851 1025 1.349026 CAACACCACCATGTCCTCTCT 59.651 52.381 0.00 0.00 30.55 3.10
852 1026 1.734655 ACACCACCATGTCCTCTCTT 58.265 50.000 0.00 0.00 0.00 2.85
853 1027 1.625818 ACACCACCATGTCCTCTCTTC 59.374 52.381 0.00 0.00 0.00 2.87
854 1028 1.065854 CACCACCATGTCCTCTCTTCC 60.066 57.143 0.00 0.00 0.00 3.46
855 1029 0.543749 CCACCATGTCCTCTCTTCCC 59.456 60.000 0.00 0.00 0.00 3.97
856 1030 0.543749 CACCATGTCCTCTCTTCCCC 59.456 60.000 0.00 0.00 0.00 4.81
857 1031 0.119155 ACCATGTCCTCTCTTCCCCA 59.881 55.000 0.00 0.00 0.00 4.96
858 1032 0.835941 CCATGTCCTCTCTTCCCCAG 59.164 60.000 0.00 0.00 0.00 4.45
859 1033 1.577736 CATGTCCTCTCTTCCCCAGT 58.422 55.000 0.00 0.00 0.00 4.00
860 1034 1.912043 CATGTCCTCTCTTCCCCAGTT 59.088 52.381 0.00 0.00 0.00 3.16
861 1035 2.118403 TGTCCTCTCTTCCCCAGTTT 57.882 50.000 0.00 0.00 0.00 2.66
862 1036 1.978580 TGTCCTCTCTTCCCCAGTTTC 59.021 52.381 0.00 0.00 0.00 2.78
863 1037 1.279558 GTCCTCTCTTCCCCAGTTTCC 59.720 57.143 0.00 0.00 0.00 3.13
867 1041 2.361230 CTTCCCCAGTTTCCCCGC 60.361 66.667 0.00 0.00 0.00 6.13
953 1127 2.272471 CCGCTTCCCTCCTTTCCC 59.728 66.667 0.00 0.00 0.00 3.97
1299 1473 4.862823 CTCCTCCCCGTCCTCCCC 62.863 77.778 0.00 0.00 0.00 4.81
1301 1475 3.436028 CCTCCCCGTCCTCCCCTA 61.436 72.222 0.00 0.00 0.00 3.53
1302 1476 2.123382 CTCCCCGTCCTCCCCTAC 60.123 72.222 0.00 0.00 0.00 3.18
1303 1477 3.752816 CTCCCCGTCCTCCCCTACC 62.753 73.684 0.00 0.00 0.00 3.18
1308 1482 3.468140 GTCCTCCCCTACCGCCAC 61.468 72.222 0.00 0.00 0.00 5.01
1309 1483 4.791069 TCCTCCCCTACCGCCACC 62.791 72.222 0.00 0.00 0.00 4.61
1310 1484 4.798682 CCTCCCCTACCGCCACCT 62.799 72.222 0.00 0.00 0.00 4.00
1311 1485 3.155167 CTCCCCTACCGCCACCTC 61.155 72.222 0.00 0.00 0.00 3.85
1312 1486 3.680196 TCCCCTACCGCCACCTCT 61.680 66.667 0.00 0.00 0.00 3.69
1313 1487 2.687566 CCCCTACCGCCACCTCTT 60.688 66.667 0.00 0.00 0.00 2.85
1314 1488 2.732619 CCCCTACCGCCACCTCTTC 61.733 68.421 0.00 0.00 0.00 2.87
1315 1489 2.732619 CCCTACCGCCACCTCTTCC 61.733 68.421 0.00 0.00 0.00 3.46
1316 1490 2.732619 CCTACCGCCACCTCTTCCC 61.733 68.421 0.00 0.00 0.00 3.97
1317 1491 3.072468 TACCGCCACCTCTTCCCG 61.072 66.667 0.00 0.00 0.00 5.14
1704 2231 4.431131 ATGCAGGGGTTCGGCCTG 62.431 66.667 0.00 0.00 35.67 4.85
1811 2338 5.454471 CGAGAATGAAGAAAGAGGGGATCAT 60.454 44.000 0.00 0.00 0.00 2.45
2041 2568 1.003118 TGTTGCCTGATGTAGTGACCC 59.997 52.381 0.00 0.00 0.00 4.46
2130 2657 1.072505 GCGTGAGAAGGGGGTGAAA 59.927 57.895 0.00 0.00 0.00 2.69
2286 2813 4.326255 GCATACTGCAAGGCTGGT 57.674 55.556 0.00 0.00 44.26 4.00
2331 2858 2.748209 TGGATGAGATGGTCGGTAGA 57.252 50.000 0.00 0.00 0.00 2.59
2352 2879 4.141158 AGAGGACTCAAATTGGACACCTTT 60.141 41.667 1.75 0.00 0.00 3.11
2364 2891 5.410355 TGGACACCTTTACGCTTAATACT 57.590 39.130 0.00 0.00 0.00 2.12
2421 2948 1.451028 GGCTCAAGGGCTGCTACAG 60.451 63.158 0.00 0.00 37.53 2.74
2937 3464 2.610976 GGATGTTGATGCTGCTTTGCAA 60.611 45.455 0.00 0.00 46.61 4.08
2941 3468 3.878103 TGTTGATGCTGCTTTGCAATTTT 59.122 34.783 0.00 0.00 46.61 1.82
2971 3498 0.179936 GGAGGTCAGAGGATTGCAGG 59.820 60.000 0.00 0.00 0.00 4.85
3080 3607 4.560128 TCTGAGAGTGGAAAATTGTCTCG 58.440 43.478 0.00 0.00 37.13 4.04
3112 3639 1.209261 CTCCCCTCTTGAAGCCTTCTC 59.791 57.143 5.96 0.00 0.00 2.87
3198 3725 3.173151 TCCACAAGATAGTGCTCTGGAA 58.827 45.455 0.00 0.00 38.18 3.53
3410 3937 2.490509 CTGCTCTTTGATGTGGCATCAA 59.509 45.455 17.42 17.42 36.37 2.57
3474 4001 0.039764 TCGGAGGAGTGTGATGGACT 59.960 55.000 0.00 0.00 0.00 3.85
3483 4010 6.601332 AGGAGTGTGATGGACTTAAAAGAAA 58.399 36.000 0.00 0.00 0.00 2.52
3555 4083 7.199766 TGTTAGTTTTTCAGTTGCAATACCAG 58.800 34.615 0.59 0.00 0.00 4.00
3563 4091 5.565509 TCAGTTGCAATACCAGGTAAATCA 58.434 37.500 0.59 0.00 0.00 2.57
3574 4102 6.976934 ACCAGGTAAATCAATTTCACAGTT 57.023 33.333 0.00 0.00 0.00 3.16
3623 4151 7.526608 TGCTATTGCAGTTTAAGTACATGTTC 58.473 34.615 2.30 0.00 45.31 3.18
3626 4154 5.839262 TGCAGTTTAAGTACATGTTCTCG 57.161 39.130 2.30 0.00 0.00 4.04
3635 4163 9.925268 TTTAAGTACATGTTCTCGAAACTTTTC 57.075 29.630 2.30 0.00 0.00 2.29
3672 4200 0.107945 GCTAGGTTCTCAGCCAGTGG 60.108 60.000 4.20 4.20 0.00 4.00
3682 4210 2.226315 AGCCAGTGGGTGATGCAGA 61.226 57.895 14.44 0.00 36.17 4.26
3683 4211 1.077212 GCCAGTGGGTGATGCAGAT 60.077 57.895 12.15 0.00 36.17 2.90
3686 4214 1.474677 CCAGTGGGTGATGCAGATCTC 60.475 57.143 0.00 0.00 0.00 2.75
3712 4240 1.681264 GCCACCTGCACTGTAGTTTTT 59.319 47.619 0.00 0.00 40.77 1.94
3812 4340 5.418840 ACATGCTTTCTAAAATCCGTCCAAT 59.581 36.000 0.00 0.00 0.00 3.16
3879 4408 3.370061 GCTCTGGACCGTAATTGTTGTAC 59.630 47.826 0.00 0.00 0.00 2.90
3917 4446 3.181438 TGGTTGCCAACATACTTACCTGT 60.181 43.478 10.18 0.00 0.00 4.00
3921 4450 4.581868 TGCCAACATACTTACCTGTTACC 58.418 43.478 0.00 0.00 33.96 2.85
3922 4451 3.943381 GCCAACATACTTACCTGTTACCC 59.057 47.826 0.00 0.00 33.96 3.69
3923 4452 4.520179 CCAACATACTTACCTGTTACCCC 58.480 47.826 0.00 0.00 33.96 4.95
3924 4453 4.520179 CAACATACTTACCTGTTACCCCC 58.480 47.826 0.00 0.00 33.96 5.40
3927 4456 1.962558 ACTTACCTGTTACCCCCTCC 58.037 55.000 0.00 0.00 0.00 4.30
3930 4459 2.185663 TACCTGTTACCCCCTCCATC 57.814 55.000 0.00 0.00 0.00 3.51
3931 4460 0.623617 ACCTGTTACCCCCTCCATCC 60.624 60.000 0.00 0.00 0.00 3.51
3932 4461 1.353394 CCTGTTACCCCCTCCATCCC 61.353 65.000 0.00 0.00 0.00 3.85
3933 4462 0.623324 CTGTTACCCCCTCCATCCCA 60.623 60.000 0.00 0.00 0.00 4.37
3934 4463 0.917333 TGTTACCCCCTCCATCCCAC 60.917 60.000 0.00 0.00 0.00 4.61
3935 4464 0.917333 GTTACCCCCTCCATCCCACA 60.917 60.000 0.00 0.00 0.00 4.17
3936 4465 0.178828 TTACCCCCTCCATCCCACAA 60.179 55.000 0.00 0.00 0.00 3.33
3937 4466 0.047176 TACCCCCTCCATCCCACAAT 59.953 55.000 0.00 0.00 0.00 2.71
3938 4467 0.855400 ACCCCCTCCATCCCACAATT 60.855 55.000 0.00 0.00 0.00 2.32
3939 4468 0.339510 CCCCCTCCATCCCACAATTT 59.660 55.000 0.00 0.00 0.00 1.82
3940 4469 1.573376 CCCCCTCCATCCCACAATTTA 59.427 52.381 0.00 0.00 0.00 1.40
3941 4470 2.023501 CCCCCTCCATCCCACAATTTAA 60.024 50.000 0.00 0.00 0.00 1.52
3942 4471 3.299503 CCCCTCCATCCCACAATTTAAG 58.700 50.000 0.00 0.00 0.00 1.85
3943 4472 3.052944 CCCCTCCATCCCACAATTTAAGA 60.053 47.826 0.00 0.00 0.00 2.10
3944 4473 3.954258 CCCTCCATCCCACAATTTAAGAC 59.046 47.826 0.00 0.00 0.00 3.01
3945 4474 3.627577 CCTCCATCCCACAATTTAAGACG 59.372 47.826 0.00 0.00 0.00 4.18
3946 4475 4.261801 CTCCATCCCACAATTTAAGACGT 58.738 43.478 0.00 0.00 0.00 4.34
3947 4476 4.658063 TCCATCCCACAATTTAAGACGTT 58.342 39.130 0.00 0.00 0.00 3.99
3948 4477 5.074115 TCCATCCCACAATTTAAGACGTTT 58.926 37.500 0.00 0.00 0.00 3.60
3949 4478 5.536916 TCCATCCCACAATTTAAGACGTTTT 59.463 36.000 0.00 0.00 0.00 2.43
3950 4479 6.041069 TCCATCCCACAATTTAAGACGTTTTT 59.959 34.615 0.00 0.00 0.00 1.94
3951 4480 6.145371 CCATCCCACAATTTAAGACGTTTTTG 59.855 38.462 0.00 0.00 0.00 2.44
3952 4481 5.044558 TCCCACAATTTAAGACGTTTTTGC 58.955 37.500 0.00 0.00 0.00 3.68
3953 4482 4.806247 CCCACAATTTAAGACGTTTTTGCA 59.194 37.500 0.00 0.00 0.00 4.08
3954 4483 5.292101 CCCACAATTTAAGACGTTTTTGCAA 59.708 36.000 0.00 0.00 0.00 4.08
3955 4484 6.410038 CCACAATTTAAGACGTTTTTGCAAG 58.590 36.000 0.00 0.00 0.00 4.01
3956 4485 5.895889 CACAATTTAAGACGTTTTTGCAAGC 59.104 36.000 0.00 0.00 0.00 4.01
3957 4486 5.810074 ACAATTTAAGACGTTTTTGCAAGCT 59.190 32.000 0.00 0.00 0.00 3.74
3958 4487 6.019881 ACAATTTAAGACGTTTTTGCAAGCTC 60.020 34.615 0.00 0.00 0.00 4.09
3959 4488 4.624336 TTAAGACGTTTTTGCAAGCTCA 57.376 36.364 0.00 0.00 0.00 4.26
3960 4489 3.502191 AAGACGTTTTTGCAAGCTCAA 57.498 38.095 0.00 0.00 0.00 3.02
3961 4490 2.797491 AGACGTTTTTGCAAGCTCAAC 58.203 42.857 0.00 1.34 0.00 3.18
3962 4491 2.423538 AGACGTTTTTGCAAGCTCAACT 59.576 40.909 0.00 0.00 0.00 3.16
3963 4492 3.625764 AGACGTTTTTGCAAGCTCAACTA 59.374 39.130 0.00 0.00 0.00 2.24
3964 4493 3.952535 ACGTTTTTGCAAGCTCAACTAG 58.047 40.909 0.00 0.00 0.00 2.57
3979 4508 5.873732 CTCAACTAGCTTGCAAAATACTCC 58.126 41.667 0.00 0.00 0.00 3.85
3980 4509 4.700213 TCAACTAGCTTGCAAAATACTCCC 59.300 41.667 0.00 0.00 0.00 4.30
3981 4510 4.576330 ACTAGCTTGCAAAATACTCCCT 57.424 40.909 0.00 0.00 0.00 4.20
3982 4511 4.518249 ACTAGCTTGCAAAATACTCCCTC 58.482 43.478 0.00 0.00 0.00 4.30
3983 4512 2.728007 AGCTTGCAAAATACTCCCTCC 58.272 47.619 0.00 0.00 0.00 4.30
3984 4513 1.401905 GCTTGCAAAATACTCCCTCCG 59.598 52.381 0.00 0.00 0.00 4.63
3985 4514 2.711542 CTTGCAAAATACTCCCTCCGT 58.288 47.619 0.00 0.00 0.00 4.69
3986 4515 2.396590 TGCAAAATACTCCCTCCGTC 57.603 50.000 0.00 0.00 0.00 4.79
3987 4516 1.065709 TGCAAAATACTCCCTCCGTCC 60.066 52.381 0.00 0.00 0.00 4.79
3988 4517 1.935933 CAAAATACTCCCTCCGTCCG 58.064 55.000 0.00 0.00 0.00 4.79
3989 4518 0.828677 AAAATACTCCCTCCGTCCGG 59.171 55.000 0.00 0.00 0.00 5.14
3990 4519 0.032813 AAATACTCCCTCCGTCCGGA 60.033 55.000 0.00 0.00 42.90 5.14
3991 4520 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3992 4521 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
3993 4522 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3994 4523 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3995 4524 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3996 4525 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3997 4526 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3998 4527 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3999 4528 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4000 4529 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4001 4530 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4002 4531 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
4003 4532 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
4004 4533 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
4005 4534 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
4006 4535 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
4007 4536 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
4008 4537 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
4009 4538 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
4010 4539 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
4011 4540 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
4012 4541 5.368989 GAAATACTTGTCGGAGGAATGGAT 58.631 41.667 0.00 0.00 0.00 3.41
4013 4542 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
4014 4543 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
4015 4544 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
4016 4545 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
4017 4546 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
4018 4547 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
4019 4548 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
4020 4549 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
4021 4550 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
4022 4551 5.010933 TCGGAGGAATGGATGTATCTAGAC 58.989 45.833 0.00 0.00 0.00 2.59
4023 4552 4.767409 CGGAGGAATGGATGTATCTAGACA 59.233 45.833 0.00 0.00 0.00 3.41
4024 4553 5.420421 CGGAGGAATGGATGTATCTAGACAT 59.580 44.000 0.00 0.00 42.82 3.06
4025 4554 6.603599 CGGAGGAATGGATGTATCTAGACATA 59.396 42.308 0.00 0.00 40.18 2.29
4026 4555 7.286546 CGGAGGAATGGATGTATCTAGACATAT 59.713 40.741 0.00 0.00 40.18 1.78
4027 4556 8.986991 GGAGGAATGGATGTATCTAGACATATT 58.013 37.037 0.00 0.00 40.18 1.28
4056 4585 9.851686 AGTTCTAGATACATCCATTTTTATGCA 57.148 29.630 0.00 0.00 0.00 3.96
4063 4592 9.415544 GATACATCCATTTTTATGCATTTCTCC 57.584 33.333 3.54 0.00 0.00 3.71
4064 4593 6.275335 ACATCCATTTTTATGCATTTCTCCG 58.725 36.000 3.54 0.00 0.00 4.63
4065 4594 6.096705 ACATCCATTTTTATGCATTTCTCCGA 59.903 34.615 3.54 0.00 0.00 4.55
4066 4595 5.890334 TCCATTTTTATGCATTTCTCCGAC 58.110 37.500 3.54 0.00 0.00 4.79
4067 4596 5.417266 TCCATTTTTATGCATTTCTCCGACA 59.583 36.000 3.54 0.00 0.00 4.35
4068 4597 6.071672 TCCATTTTTATGCATTTCTCCGACAA 60.072 34.615 3.54 0.00 0.00 3.18
4069 4598 6.254157 CCATTTTTATGCATTTCTCCGACAAG 59.746 38.462 3.54 0.00 0.00 3.16
4070 4599 5.957842 TTTTATGCATTTCTCCGACAAGT 57.042 34.783 3.54 0.00 0.00 3.16
4071 4600 7.441890 TTTTTATGCATTTCTCCGACAAGTA 57.558 32.000 3.54 0.00 0.00 2.24
4072 4601 7.624360 TTTTATGCATTTCTCCGACAAGTAT 57.376 32.000 3.54 0.00 0.00 2.12
4073 4602 7.624360 TTTATGCATTTCTCCGACAAGTATT 57.376 32.000 3.54 0.00 0.00 1.89
4074 4603 7.624360 TTATGCATTTCTCCGACAAGTATTT 57.376 32.000 3.54 0.00 0.00 1.40
4075 4604 5.545658 TGCATTTCTCCGACAAGTATTTC 57.454 39.130 0.00 0.00 0.00 2.17
4076 4605 4.394920 TGCATTTCTCCGACAAGTATTTCC 59.605 41.667 0.00 0.00 0.00 3.13
4077 4606 4.494199 GCATTTCTCCGACAAGTATTTCCG 60.494 45.833 0.00 0.00 0.00 4.30
4078 4607 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
4079 4608 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
4080 4609 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
4081 4610 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
4082 4611 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
4083 4612 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
4084 4613 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
4085 4614 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4086 4615 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4087 4616 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4088 4617 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4089 4618 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4090 4619 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4091 4620 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
4092 4621 2.044650 CCGGACGGAGGGAGTACA 60.045 66.667 4.40 0.00 37.50 2.90
4093 4622 1.455217 CCGGACGGAGGGAGTACAT 60.455 63.158 4.40 0.00 37.50 2.29
4094 4623 1.041447 CCGGACGGAGGGAGTACATT 61.041 60.000 4.40 0.00 37.50 2.71
4095 4624 0.102481 CGGACGGAGGGAGTACATTG 59.898 60.000 0.00 0.00 0.00 2.82
4096 4625 1.192428 GGACGGAGGGAGTACATTGT 58.808 55.000 0.00 0.00 0.00 2.71
4097 4626 1.134788 GGACGGAGGGAGTACATTGTG 60.135 57.143 0.00 0.00 0.00 3.33
4098 4627 0.902531 ACGGAGGGAGTACATTGTGG 59.097 55.000 0.00 0.00 0.00 4.17
4099 4628 0.178068 CGGAGGGAGTACATTGTGGG 59.822 60.000 0.00 0.00 0.00 4.61
4100 4629 1.580059 GGAGGGAGTACATTGTGGGA 58.420 55.000 0.00 0.00 0.00 4.37
4101 4630 1.209747 GGAGGGAGTACATTGTGGGAC 59.790 57.143 0.00 0.00 0.00 4.46
4102 4631 0.902531 AGGGAGTACATTGTGGGACG 59.097 55.000 0.00 0.00 0.00 4.79
4103 4632 0.107848 GGGAGTACATTGTGGGACGG 60.108 60.000 0.00 0.00 0.00 4.79
4104 4633 0.899720 GGAGTACATTGTGGGACGGA 59.100 55.000 0.00 0.00 0.00 4.69
4105 4634 1.134788 GGAGTACATTGTGGGACGGAG 60.135 57.143 0.00 0.00 0.00 4.63
4106 4635 0.902531 AGTACATTGTGGGACGGAGG 59.097 55.000 0.00 0.00 0.00 4.30
4107 4636 0.107848 GTACATTGTGGGACGGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
4108 4637 0.252330 TACATTGTGGGACGGAGGGA 60.252 55.000 0.00 0.00 0.00 4.20
4109 4638 1.221840 CATTGTGGGACGGAGGGAG 59.778 63.158 0.00 0.00 0.00 4.30
4110 4639 1.229529 ATTGTGGGACGGAGGGAGT 60.230 57.895 0.00 0.00 0.00 3.85
4111 4640 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
4112 4641 0.613853 TTGTGGGACGGAGGGAGTAG 60.614 60.000 0.00 0.00 0.00 2.57
4113 4642 1.000107 GTGGGACGGAGGGAGTAGT 60.000 63.158 0.00 0.00 0.00 2.73
4114 4643 0.257039 GTGGGACGGAGGGAGTAGTA 59.743 60.000 0.00 0.00 0.00 1.82
4115 4644 0.257039 TGGGACGGAGGGAGTAGTAC 59.743 60.000 0.00 0.00 0.00 2.73
4116 4645 0.550432 GGGACGGAGGGAGTAGTACT 59.450 60.000 1.37 1.37 0.00 2.73
4117 4646 1.064091 GGGACGGAGGGAGTAGTACTT 60.064 57.143 0.00 0.00 0.00 2.24
4118 4647 2.622714 GGGACGGAGGGAGTAGTACTTT 60.623 54.545 0.00 0.00 0.00 2.66
4119 4648 2.426381 GGACGGAGGGAGTAGTACTTTG 59.574 54.545 0.00 0.00 0.00 2.77
4120 4649 3.087781 GACGGAGGGAGTAGTACTTTGT 58.912 50.000 0.00 0.00 0.00 2.83
4121 4650 3.087781 ACGGAGGGAGTAGTACTTTGTC 58.912 50.000 0.00 1.69 0.00 3.18
4122 4651 3.087031 CGGAGGGAGTAGTACTTTGTCA 58.913 50.000 0.00 0.00 0.00 3.58
4123 4652 3.508793 CGGAGGGAGTAGTACTTTGTCAA 59.491 47.826 0.00 0.00 0.00 3.18
4124 4653 4.021719 CGGAGGGAGTAGTACTTTGTCAAA 60.022 45.833 0.00 0.00 0.00 2.69
4125 4654 5.480205 GGAGGGAGTAGTACTTTGTCAAAG 58.520 45.833 21.34 21.34 44.10 2.77
4126 4655 5.480205 GAGGGAGTAGTACTTTGTCAAAGG 58.520 45.833 25.38 10.66 42.82 3.11
4143 4672 6.152379 GTCAAAGGAAAATGGATGTCAACTC 58.848 40.000 0.00 0.00 0.00 3.01
4158 4687 3.126000 GTCAACTCTTGCATGTTCTAGGC 59.874 47.826 0.00 0.00 36.42 3.93
4165 4700 6.098982 ACTCTTGCATGTTCTAGGCTATAGTT 59.901 38.462 0.84 0.00 36.92 2.24
4166 4701 6.283694 TCTTGCATGTTCTAGGCTATAGTTG 58.716 40.000 0.84 0.00 36.92 3.16
4168 4703 4.141733 TGCATGTTCTAGGCTATAGTTGCA 60.142 41.667 12.38 12.38 36.92 4.08
4171 4706 3.706594 TGTTCTAGGCTATAGTTGCAGCT 59.293 43.478 8.54 8.54 37.91 4.24
4187 4722 3.376234 TGCAGCTATTTGTCTCAATGCTC 59.624 43.478 0.00 0.00 33.68 4.26
4217 4753 6.184789 TCTTAAGCAAAGGGGTAATTGTAGG 58.815 40.000 0.00 0.00 35.75 3.18
4232 4768 9.376075 GGTAATTGTAGGTAGAAAAGGTCTTAC 57.624 37.037 0.00 0.00 37.84 2.34
4233 4769 9.376075 GTAATTGTAGGTAGAAAAGGTCTTACC 57.624 37.037 0.00 0.00 37.84 2.85
4255 4791 6.269974 ACCTAACCTAGTTTAGATCCTTGGT 58.730 40.000 8.54 0.00 38.24 3.67
4286 4822 5.496556 TGTGCTACCACACTAATATTTGCT 58.503 37.500 0.00 0.00 46.51 3.91
4295 4831 6.093909 CCACACTAATATTTGCTGTCATGTGA 59.906 38.462 13.64 0.00 36.65 3.58
4297 4833 6.881065 ACACTAATATTTGCTGTCATGTGACT 59.119 34.615 13.71 0.00 44.99 3.41
4299 4835 8.331022 CACTAATATTTGCTGTCATGTGACTAC 58.669 37.037 13.71 6.82 44.99 2.73
4302 4838 4.607293 TTTGCTGTCATGTGACTACTCT 57.393 40.909 13.71 0.00 44.99 3.24
4316 4852 7.859540 TGTGACTACTCTAGTAACATACTCCT 58.140 38.462 0.00 0.00 43.57 3.69
4317 4853 8.985922 TGTGACTACTCTAGTAACATACTCCTA 58.014 37.037 0.00 0.00 43.57 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.599343 TGAGGGTCGACATTCAATTGAG 58.401 45.455 18.91 0.49 0.00 3.02
1 2 3.694043 TGAGGGTCGACATTCAATTGA 57.306 42.857 18.91 3.38 0.00 2.57
2 3 4.764679 TTTGAGGGTCGACATTCAATTG 57.235 40.909 25.09 0.00 30.45 2.32
3 4 5.301805 AGTTTTTGAGGGTCGACATTCAATT 59.698 36.000 25.09 13.92 30.45 2.32
4 5 4.827284 AGTTTTTGAGGGTCGACATTCAAT 59.173 37.500 25.09 13.63 30.45 2.57
5 6 4.204012 AGTTTTTGAGGGTCGACATTCAA 58.796 39.130 22.43 22.43 0.00 2.69
6 7 3.815809 AGTTTTTGAGGGTCGACATTCA 58.184 40.909 18.91 16.55 0.00 2.57
7 8 4.392138 CCTAGTTTTTGAGGGTCGACATTC 59.608 45.833 18.91 14.10 0.00 2.67
8 9 4.324267 CCTAGTTTTTGAGGGTCGACATT 58.676 43.478 18.91 4.09 0.00 2.71
9 10 3.307480 CCCTAGTTTTTGAGGGTCGACAT 60.307 47.826 18.91 4.87 46.57 3.06
10 11 2.038033 CCCTAGTTTTTGAGGGTCGACA 59.962 50.000 18.91 0.00 46.57 4.35
11 12 2.696506 CCCTAGTTTTTGAGGGTCGAC 58.303 52.381 7.13 7.13 46.57 4.20
17 18 4.938226 CACTAAGCTCCCTAGTTTTTGAGG 59.062 45.833 0.00 0.00 0.00 3.86
18 19 5.552178 ACACTAAGCTCCCTAGTTTTTGAG 58.448 41.667 0.00 0.00 0.00 3.02
19 20 5.562298 ACACTAAGCTCCCTAGTTTTTGA 57.438 39.130 0.00 0.00 0.00 2.69
20 21 7.923414 ATAACACTAAGCTCCCTAGTTTTTG 57.077 36.000 1.82 0.00 0.00 2.44
22 23 9.668497 CTTTATAACACTAAGCTCCCTAGTTTT 57.332 33.333 0.00 0.00 0.00 2.43
23 24 8.265764 CCTTTATAACACTAAGCTCCCTAGTTT 58.734 37.037 0.00 0.00 0.00 2.66
24 25 7.622479 TCCTTTATAACACTAAGCTCCCTAGTT 59.378 37.037 0.00 0.00 0.00 2.24
25 26 7.069702 GTCCTTTATAACACTAAGCTCCCTAGT 59.930 40.741 0.00 0.00 0.00 2.57
26 27 7.288158 AGTCCTTTATAACACTAAGCTCCCTAG 59.712 40.741 0.00 0.00 0.00 3.02
27 28 7.130775 AGTCCTTTATAACACTAAGCTCCCTA 58.869 38.462 0.00 0.00 0.00 3.53
28 29 5.965091 AGTCCTTTATAACACTAAGCTCCCT 59.035 40.000 0.00 0.00 0.00 4.20
29 30 6.236558 AGTCCTTTATAACACTAAGCTCCC 57.763 41.667 0.00 0.00 0.00 4.30
30 31 7.328737 TCAAGTCCTTTATAACACTAAGCTCC 58.671 38.462 0.00 0.00 0.00 4.70
31 32 8.821894 CATCAAGTCCTTTATAACACTAAGCTC 58.178 37.037 0.00 0.00 0.00 4.09
32 33 8.540388 TCATCAAGTCCTTTATAACACTAAGCT 58.460 33.333 0.00 0.00 0.00 3.74
33 34 8.604890 GTCATCAAGTCCTTTATAACACTAAGC 58.395 37.037 0.00 0.00 0.00 3.09
34 35 9.877178 AGTCATCAAGTCCTTTATAACACTAAG 57.123 33.333 0.00 0.00 0.00 2.18
35 36 9.871238 GAGTCATCAAGTCCTTTATAACACTAA 57.129 33.333 0.00 0.00 0.00 2.24
36 37 9.031537 TGAGTCATCAAGTCCTTTATAACACTA 57.968 33.333 0.00 0.00 30.61 2.74
37 38 7.819900 GTGAGTCATCAAGTCCTTTATAACACT 59.180 37.037 0.00 0.00 37.14 3.55
38 39 7.602644 TGTGAGTCATCAAGTCCTTTATAACAC 59.397 37.037 0.00 0.00 37.14 3.32
39 40 7.676004 TGTGAGTCATCAAGTCCTTTATAACA 58.324 34.615 0.00 0.00 37.14 2.41
40 41 8.547967 TTGTGAGTCATCAAGTCCTTTATAAC 57.452 34.615 0.00 0.00 37.14 1.89
41 42 9.739276 ATTTGTGAGTCATCAAGTCCTTTATAA 57.261 29.630 0.00 0.00 37.14 0.98
42 43 9.383519 GATTTGTGAGTCATCAAGTCCTTTATA 57.616 33.333 14.43 0.00 37.14 0.98
43 44 7.065085 CGATTTGTGAGTCATCAAGTCCTTTAT 59.935 37.037 17.18 6.12 37.14 1.40
44 45 6.368791 CGATTTGTGAGTCATCAAGTCCTTTA 59.631 38.462 17.18 2.88 37.14 1.85
45 46 5.180117 CGATTTGTGAGTCATCAAGTCCTTT 59.820 40.000 17.18 2.16 37.14 3.11
46 47 4.692625 CGATTTGTGAGTCATCAAGTCCTT 59.307 41.667 17.18 0.00 37.14 3.36
47 48 4.021104 TCGATTTGTGAGTCATCAAGTCCT 60.021 41.667 17.18 4.75 37.14 3.85
48 49 4.245660 TCGATTTGTGAGTCATCAAGTCC 58.754 43.478 17.18 8.27 37.14 3.85
49 50 5.406780 ACTTCGATTTGTGAGTCATCAAGTC 59.593 40.000 14.95 14.95 37.14 3.01
50 51 5.300752 ACTTCGATTTGTGAGTCATCAAGT 58.699 37.500 0.00 0.00 37.14 3.16
51 52 5.852738 ACTTCGATTTGTGAGTCATCAAG 57.147 39.130 0.00 0.15 37.14 3.02
52 53 6.455647 ACTACTTCGATTTGTGAGTCATCAA 58.544 36.000 0.00 0.00 37.14 2.57
53 54 6.025749 ACTACTTCGATTTGTGAGTCATCA 57.974 37.500 0.00 0.00 0.00 3.07
54 55 6.952935 AACTACTTCGATTTGTGAGTCATC 57.047 37.500 0.00 0.00 0.00 2.92
56 57 9.569167 CTAATAACTACTTCGATTTGTGAGTCA 57.431 33.333 0.00 0.00 0.00 3.41
57 58 8.533153 GCTAATAACTACTTCGATTTGTGAGTC 58.467 37.037 0.00 0.00 0.00 3.36
58 59 8.033038 TGCTAATAACTACTTCGATTTGTGAGT 58.967 33.333 0.00 0.00 0.00 3.41
59 60 8.407457 TGCTAATAACTACTTCGATTTGTGAG 57.593 34.615 0.00 0.00 0.00 3.51
69 70 4.515567 GGGGCACATGCTAATAACTACTTC 59.484 45.833 3.48 0.00 41.70 3.01
98 100 1.073284 CGGTTTTCTTCCTCCTTGGGA 59.927 52.381 0.00 0.00 36.20 4.37
100 102 1.880027 CACGGTTTTCTTCCTCCTTGG 59.120 52.381 0.00 0.00 37.10 3.61
114 116 4.355925 GAAGGCGTCTTCACGGTT 57.644 55.556 24.39 0.00 46.80 4.44
135 137 1.179174 TCAGATTCGCGGGATCGGAT 61.179 55.000 17.08 0.00 36.79 4.18
139 141 0.105039 AACCTCAGATTCGCGGGATC 59.895 55.000 6.13 10.77 0.00 3.36
146 148 2.810650 CGGAAGGTAACCTCAGATTCG 58.189 52.381 0.00 0.00 30.89 3.34
170 172 2.125512 CTCTTCCCGCGACCTTGG 60.126 66.667 8.23 0.00 0.00 3.61
176 178 2.294170 ATCCTACCCTCTTCCCGCGA 62.294 60.000 8.23 0.00 0.00 5.87
178 180 0.759436 TGATCCTACCCTCTTCCCGC 60.759 60.000 0.00 0.00 0.00 6.13
179 181 1.041437 GTGATCCTACCCTCTTCCCG 58.959 60.000 0.00 0.00 0.00 5.14
190 192 1.136891 CGCTGATGTGTGGTGATCCTA 59.863 52.381 0.00 0.00 34.23 2.94
191 193 0.107993 CGCTGATGTGTGGTGATCCT 60.108 55.000 0.00 0.00 34.23 3.24
194 196 1.660167 CATCGCTGATGTGTGGTGAT 58.340 50.000 9.48 0.00 35.54 3.06
234 240 1.714899 ATACAACGATGGCCGCAAGC 61.715 55.000 0.00 0.00 43.32 4.01
235 241 0.732571 AATACAACGATGGCCGCAAG 59.267 50.000 0.00 0.00 43.32 4.01
238 244 2.353579 ACTTAAATACAACGATGGCCGC 59.646 45.455 0.00 0.00 43.32 6.53
239 245 4.609691 AACTTAAATACAACGATGGCCG 57.390 40.909 0.00 0.00 45.44 6.13
242 248 8.789881 TTGTTCAAACTTAAATACAACGATGG 57.210 30.769 0.00 0.00 0.00 3.51
371 399 6.157904 TCGAACATCTTATAACGGTGAACAA 58.842 36.000 0.00 0.00 0.00 2.83
373 401 6.823678 ATCGAACATCTTATAACGGTGAAC 57.176 37.500 0.00 0.00 0.00 3.18
454 486 6.413892 TGGACTGCATACATACTGAAATGAA 58.586 36.000 0.00 0.00 0.00 2.57
465 497 9.182214 GGATATTTCAATATGGACTGCATACAT 57.818 33.333 0.00 0.00 31.96 2.29
472 504 7.944061 TGCTTTGGATATTTCAATATGGACTG 58.056 34.615 0.00 0.00 31.96 3.51
495 528 9.509855 CTCTCTCCGTTCACTATTATAATATGC 57.490 37.037 5.64 0.00 0.00 3.14
585 648 6.146347 GTCACTTTGAGTACTTCATCTGTTCC 59.854 42.308 0.00 0.00 35.27 3.62
648 711 5.565509 TCCAGGTTGCATACAAAATAGTGA 58.434 37.500 0.00 0.00 37.58 3.41
749 826 1.181786 CCTGAGACTCTGGTGGACTC 58.818 60.000 17.96 0.00 31.65 3.36
767 941 4.087892 TGAAGCCCGCTGAGAGCC 62.088 66.667 0.00 0.00 38.18 4.70
770 944 2.172483 GAAGGTGAAGCCCGCTGAGA 62.172 60.000 0.00 0.00 38.26 3.27
774 948 1.377725 CATGAAGGTGAAGCCCGCT 60.378 57.895 0.00 0.00 38.26 5.52
776 950 1.026718 GGACATGAAGGTGAAGCCCG 61.027 60.000 0.00 0.00 38.26 6.13
777 951 0.329596 AGGACATGAAGGTGAAGCCC 59.670 55.000 0.00 0.00 38.26 5.19
778 952 1.280421 AGAGGACATGAAGGTGAAGCC 59.720 52.381 0.00 0.00 37.58 4.35
779 953 2.235898 AGAGAGGACATGAAGGTGAAGC 59.764 50.000 0.00 0.00 0.00 3.86
780 954 4.550076 AAGAGAGGACATGAAGGTGAAG 57.450 45.455 0.00 0.00 0.00 3.02
781 955 4.982241 AAAGAGAGGACATGAAGGTGAA 57.018 40.909 0.00 0.00 0.00 3.18
782 956 4.263068 GGAAAAGAGAGGACATGAAGGTGA 60.263 45.833 0.00 0.00 0.00 4.02
783 957 4.006319 GGAAAAGAGAGGACATGAAGGTG 58.994 47.826 0.00 0.00 0.00 4.00
784 958 3.009584 GGGAAAAGAGAGGACATGAAGGT 59.990 47.826 0.00 0.00 0.00 3.50
785 959 3.615155 GGGAAAAGAGAGGACATGAAGG 58.385 50.000 0.00 0.00 0.00 3.46
786 960 3.615155 GGGGAAAAGAGAGGACATGAAG 58.385 50.000 0.00 0.00 0.00 3.02
787 961 2.027192 CGGGGAAAAGAGAGGACATGAA 60.027 50.000 0.00 0.00 0.00 2.57
788 962 1.555075 CGGGGAAAAGAGAGGACATGA 59.445 52.381 0.00 0.00 0.00 3.07
789 963 2.014068 GCGGGGAAAAGAGAGGACATG 61.014 57.143 0.00 0.00 0.00 3.21
790 964 0.253327 GCGGGGAAAAGAGAGGACAT 59.747 55.000 0.00 0.00 0.00 3.06
791 965 1.677552 GCGGGGAAAAGAGAGGACA 59.322 57.895 0.00 0.00 0.00 4.02
792 966 1.078356 GGCGGGGAAAAGAGAGGAC 60.078 63.158 0.00 0.00 0.00 3.85
793 967 2.656069 CGGCGGGGAAAAGAGAGGA 61.656 63.158 0.00 0.00 0.00 3.71
794 968 2.125106 CGGCGGGGAAAAGAGAGG 60.125 66.667 0.00 0.00 0.00 3.69
795 969 1.003718 AACGGCGGGGAAAAGAGAG 60.004 57.895 13.24 0.00 0.00 3.20
796 970 1.302192 CAACGGCGGGGAAAAGAGA 60.302 57.895 13.24 0.00 0.00 3.10
797 971 2.332654 CCAACGGCGGGGAAAAGAG 61.333 63.158 13.24 0.00 0.00 2.85
798 972 2.281900 CCAACGGCGGGGAAAAGA 60.282 61.111 13.24 0.00 0.00 2.52
817 991 3.297620 GTTGGCTGTGGGCTGTGG 61.298 66.667 0.00 0.00 41.46 4.17
818 992 2.519063 TGTTGGCTGTGGGCTGTG 60.519 61.111 0.00 0.00 41.46 3.66
819 993 2.519302 GTGTTGGCTGTGGGCTGT 60.519 61.111 0.00 0.00 41.46 4.40
820 994 3.297620 GGTGTTGGCTGTGGGCTG 61.298 66.667 0.00 0.00 41.46 4.85
821 995 3.819652 TGGTGTTGGCTGTGGGCT 61.820 61.111 0.00 0.00 41.46 5.19
822 996 3.605664 GTGGTGTTGGCTGTGGGC 61.606 66.667 0.00 0.00 40.90 5.36
823 997 2.912025 GGTGGTGTTGGCTGTGGG 60.912 66.667 0.00 0.00 0.00 4.61
824 998 1.531365 ATGGTGGTGTTGGCTGTGG 60.531 57.895 0.00 0.00 0.00 4.17
825 999 1.108727 ACATGGTGGTGTTGGCTGTG 61.109 55.000 0.00 0.00 0.00 3.66
826 1000 0.823356 GACATGGTGGTGTTGGCTGT 60.823 55.000 0.00 0.00 31.16 4.40
827 1001 1.526575 GGACATGGTGGTGTTGGCTG 61.527 60.000 0.00 0.00 31.16 4.85
828 1002 1.228552 GGACATGGTGGTGTTGGCT 60.229 57.895 0.00 0.00 31.16 4.75
829 1003 1.228552 AGGACATGGTGGTGTTGGC 60.229 57.895 0.00 0.00 31.16 4.52
830 1004 0.401738 AGAGGACATGGTGGTGTTGG 59.598 55.000 0.00 0.00 31.16 3.77
831 1005 1.349026 AGAGAGGACATGGTGGTGTTG 59.651 52.381 0.00 0.00 31.16 3.33
832 1006 1.734655 AGAGAGGACATGGTGGTGTT 58.265 50.000 0.00 0.00 31.16 3.32
833 1007 1.625818 GAAGAGAGGACATGGTGGTGT 59.374 52.381 0.00 0.00 34.39 4.16
834 1008 1.065854 GGAAGAGAGGACATGGTGGTG 60.066 57.143 0.00 0.00 0.00 4.17
835 1009 1.280457 GGAAGAGAGGACATGGTGGT 58.720 55.000 0.00 0.00 0.00 4.16
836 1010 0.543749 GGGAAGAGAGGACATGGTGG 59.456 60.000 0.00 0.00 0.00 4.61
837 1011 0.543749 GGGGAAGAGAGGACATGGTG 59.456 60.000 0.00 0.00 0.00 4.17
838 1012 0.119155 TGGGGAAGAGAGGACATGGT 59.881 55.000 0.00 0.00 0.00 3.55
839 1013 0.835941 CTGGGGAAGAGAGGACATGG 59.164 60.000 0.00 0.00 0.00 3.66
840 1014 1.577736 ACTGGGGAAGAGAGGACATG 58.422 55.000 0.00 0.00 0.00 3.21
841 1015 2.350863 AACTGGGGAAGAGAGGACAT 57.649 50.000 0.00 0.00 0.00 3.06
842 1016 1.978580 GAAACTGGGGAAGAGAGGACA 59.021 52.381 0.00 0.00 0.00 4.02
843 1017 1.279558 GGAAACTGGGGAAGAGAGGAC 59.720 57.143 0.00 0.00 0.00 3.85
844 1018 1.657804 GGAAACTGGGGAAGAGAGGA 58.342 55.000 0.00 0.00 0.00 3.71
845 1019 0.621082 GGGAAACTGGGGAAGAGAGG 59.379 60.000 0.00 0.00 0.00 3.69
846 1020 0.621082 GGGGAAACTGGGGAAGAGAG 59.379 60.000 0.00 0.00 0.00 3.20
847 1021 1.198759 CGGGGAAACTGGGGAAGAGA 61.199 60.000 0.00 0.00 0.00 3.10
848 1022 1.299976 CGGGGAAACTGGGGAAGAG 59.700 63.158 0.00 0.00 0.00 2.85
849 1023 2.902457 GCGGGGAAACTGGGGAAGA 61.902 63.158 0.00 0.00 0.00 2.87
850 1024 2.361230 GCGGGGAAACTGGGGAAG 60.361 66.667 0.00 0.00 0.00 3.46
851 1025 3.974293 GGCGGGGAAACTGGGGAA 61.974 66.667 0.00 0.00 0.00 3.97
991 1165 1.697754 GGGTGTCCATGGGGAGGAT 60.698 63.158 13.02 0.00 46.12 3.24
1295 1469 3.248248 AAGAGGTGGCGGTAGGGGA 62.248 63.158 0.00 0.00 0.00 4.81
1296 1470 2.687566 AAGAGGTGGCGGTAGGGG 60.688 66.667 0.00 0.00 0.00 4.79
1297 1471 2.732619 GGAAGAGGTGGCGGTAGGG 61.733 68.421 0.00 0.00 0.00 3.53
1298 1472 2.732619 GGGAAGAGGTGGCGGTAGG 61.733 68.421 0.00 0.00 0.00 3.18
1299 1473 2.901042 GGGAAGAGGTGGCGGTAG 59.099 66.667 0.00 0.00 0.00 3.18
1300 1474 3.072468 CGGGAAGAGGTGGCGGTA 61.072 66.667 0.00 0.00 0.00 4.02
1305 1479 3.672295 GAGCAGCGGGAAGAGGTGG 62.672 68.421 0.00 0.00 37.55 4.61
1306 1480 2.125350 GAGCAGCGGGAAGAGGTG 60.125 66.667 0.00 0.00 39.81 4.00
1307 1481 3.394836 GGAGCAGCGGGAAGAGGT 61.395 66.667 0.00 0.00 0.00 3.85
1308 1482 3.080121 AGGAGCAGCGGGAAGAGG 61.080 66.667 0.00 0.00 0.00 3.69
1309 1483 2.015227 GAGAGGAGCAGCGGGAAGAG 62.015 65.000 0.00 0.00 0.00 2.85
1310 1484 2.038007 AGAGGAGCAGCGGGAAGA 59.962 61.111 0.00 0.00 0.00 2.87
1311 1485 2.498726 GAGAGGAGCAGCGGGAAG 59.501 66.667 0.00 0.00 0.00 3.46
1312 1486 3.077556 GGAGAGGAGCAGCGGGAA 61.078 66.667 0.00 0.00 0.00 3.97
1313 1487 3.608759 AAGGAGAGGAGCAGCGGGA 62.609 63.158 0.00 0.00 0.00 5.14
1314 1488 3.080121 AAGGAGAGGAGCAGCGGG 61.080 66.667 0.00 0.00 0.00 6.13
1315 1489 2.498726 GAAGGAGAGGAGCAGCGG 59.501 66.667 0.00 0.00 0.00 5.52
1316 1490 2.103934 CGAAGGAGAGGAGCAGCG 59.896 66.667 0.00 0.00 0.00 5.18
1317 1491 1.140804 GACGAAGGAGAGGAGCAGC 59.859 63.158 0.00 0.00 0.00 5.25
1509 2036 4.736896 GCGGAGAGGACGGCGTTT 62.737 66.667 16.19 5.73 0.00 3.60
2041 2568 2.726555 GCATCAGCGAGTGTATTGTG 57.273 50.000 0.00 0.00 0.00 3.33
2130 2657 3.135994 GTTATGTGTGACCAAAGTCGGT 58.864 45.455 0.00 0.00 46.74 4.69
2286 2813 2.029560 TGCAAATGCTTTGGCGACATTA 60.030 40.909 6.97 0.00 40.71 1.90
2331 2858 3.884037 AAGGTGTCCAATTTGAGTCCT 57.116 42.857 0.00 0.00 0.00 3.85
2364 2891 6.041979 TCTCCTTGCACAGATTATATAGCACA 59.958 38.462 0.00 0.00 0.00 4.57
2449 2976 3.276857 CTGTGCCATAGCTGACTTCATT 58.723 45.455 0.00 0.00 40.80 2.57
2937 3464 4.780815 TGACCTCCATATCAGCGAAAAAT 58.219 39.130 0.00 0.00 0.00 1.82
2941 3468 2.625314 CTCTGACCTCCATATCAGCGAA 59.375 50.000 0.00 0.00 41.82 4.70
2971 3498 1.421382 TTGTAGGTAAACGCGTCAGC 58.579 50.000 14.44 13.75 40.74 4.26
3036 3563 7.986889 TCAGATAACTTATGCAGCATACTTTGA 59.013 33.333 15.05 9.06 0.00 2.69
3039 3566 7.730084 TCTCAGATAACTTATGCAGCATACTT 58.270 34.615 15.05 11.32 0.00 2.24
3112 3639 4.382470 CCCTGACTCTGTTTCATCTACAGG 60.382 50.000 0.00 0.00 42.53 4.00
3410 3937 5.189145 ACCAGATTTATGACTAAACTCCGGT 59.811 40.000 0.00 0.00 29.85 5.28
3441 3968 2.625314 TCCTCCGAGATATCAAGCACTG 59.375 50.000 5.32 0.00 0.00 3.66
3474 4001 6.073440 GCAGATCACGTACCTGTTTCTTTTAA 60.073 38.462 11.11 0.00 0.00 1.52
3483 4010 2.171840 AGAAGCAGATCACGTACCTGT 58.828 47.619 11.11 0.00 0.00 4.00
3623 4151 1.508632 TCAGGCGGAAAAGTTTCGAG 58.491 50.000 1.22 0.00 38.06 4.04
3626 4154 3.915437 TTCATCAGGCGGAAAAGTTTC 57.085 42.857 0.00 0.00 36.46 2.78
3635 4163 2.292267 AGCAGTAAATTCATCAGGCGG 58.708 47.619 0.00 0.00 0.00 6.13
3682 4210 3.790437 CAGGTGGCCAGCGGAGAT 61.790 66.667 28.24 8.62 0.00 2.75
3719 4247 5.074804 GCTGGTAAAGAAAAGGAAACCCTA 58.925 41.667 0.00 0.00 32.65 3.53
3793 4321 7.367285 TGTTTCATTGGACGGATTTTAGAAAG 58.633 34.615 0.00 0.00 0.00 2.62
3803 4331 2.270352 AAGCTGTTTCATTGGACGGA 57.730 45.000 0.00 0.00 0.00 4.69
3861 4390 2.067766 GCGTACAACAATTACGGTCCA 58.932 47.619 4.27 0.00 42.11 4.02
3867 4396 4.148891 GCTGTTCAGCGTACAACAATTAC 58.851 43.478 9.04 0.00 32.16 1.89
3879 4408 2.138596 ACCAAAAATGCTGTTCAGCG 57.861 45.000 17.95 6.26 37.69 5.18
3892 4421 4.896482 AGGTAAGTATGTTGGCAACCAAAA 59.104 37.500 26.31 9.22 45.73 2.44
3917 4446 0.178828 TTGTGGGATGGAGGGGGTAA 60.179 55.000 0.00 0.00 0.00 2.85
3921 4450 3.052944 TCTTAAATTGTGGGATGGAGGGG 60.053 47.826 0.00 0.00 0.00 4.79
3922 4451 3.954258 GTCTTAAATTGTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
3923 4452 3.627577 CGTCTTAAATTGTGGGATGGAGG 59.372 47.826 0.00 0.00 0.00 4.30
3924 4453 4.261801 ACGTCTTAAATTGTGGGATGGAG 58.738 43.478 0.00 0.00 0.00 3.86
3927 4456 6.346518 GCAAAAACGTCTTAAATTGTGGGATG 60.347 38.462 0.00 0.00 0.00 3.51
3930 4459 4.806247 TGCAAAAACGTCTTAAATTGTGGG 59.194 37.500 0.00 0.00 0.00 4.61
3931 4460 5.957910 TGCAAAAACGTCTTAAATTGTGG 57.042 34.783 0.00 0.00 0.00 4.17
3932 4461 5.895889 GCTTGCAAAAACGTCTTAAATTGTG 59.104 36.000 0.00 0.00 0.00 3.33
3933 4462 5.810074 AGCTTGCAAAAACGTCTTAAATTGT 59.190 32.000 0.00 0.00 0.00 2.71
3934 4463 6.019961 TGAGCTTGCAAAAACGTCTTAAATTG 60.020 34.615 0.00 0.00 0.00 2.32
3935 4464 6.039616 TGAGCTTGCAAAAACGTCTTAAATT 58.960 32.000 0.00 0.00 0.00 1.82
3936 4465 5.587289 TGAGCTTGCAAAAACGTCTTAAAT 58.413 33.333 0.00 0.00 0.00 1.40
3937 4466 4.987832 TGAGCTTGCAAAAACGTCTTAAA 58.012 34.783 0.00 0.00 0.00 1.52
3938 4467 4.624336 TGAGCTTGCAAAAACGTCTTAA 57.376 36.364 0.00 0.00 0.00 1.85
3939 4468 4.095782 AGTTGAGCTTGCAAAAACGTCTTA 59.904 37.500 0.00 0.00 0.00 2.10
3940 4469 3.119495 AGTTGAGCTTGCAAAAACGTCTT 60.119 39.130 0.00 0.00 0.00 3.01
3941 4470 2.423538 AGTTGAGCTTGCAAAAACGTCT 59.576 40.909 0.00 0.00 0.00 4.18
3942 4471 2.797491 AGTTGAGCTTGCAAAAACGTC 58.203 42.857 0.00 0.00 0.00 4.34
3943 4472 2.939460 AGTTGAGCTTGCAAAAACGT 57.061 40.000 0.00 0.00 0.00 3.99
3956 4485 5.163713 GGGAGTATTTTGCAAGCTAGTTGAG 60.164 44.000 0.00 0.00 38.60 3.02
3957 4486 4.700213 GGGAGTATTTTGCAAGCTAGTTGA 59.300 41.667 0.00 0.00 38.60 3.18
3958 4487 4.702131 AGGGAGTATTTTGCAAGCTAGTTG 59.298 41.667 0.00 0.00 39.41 3.16
3959 4488 4.923415 AGGGAGTATTTTGCAAGCTAGTT 58.077 39.130 0.00 0.00 0.00 2.24
3960 4489 4.518249 GAGGGAGTATTTTGCAAGCTAGT 58.482 43.478 0.00 0.00 0.00 2.57
3961 4490 3.879892 GGAGGGAGTATTTTGCAAGCTAG 59.120 47.826 0.00 0.00 0.00 3.42
3962 4491 3.681594 CGGAGGGAGTATTTTGCAAGCTA 60.682 47.826 0.00 0.00 0.00 3.32
3963 4492 2.728007 GGAGGGAGTATTTTGCAAGCT 58.272 47.619 0.00 0.00 0.00 3.74
3964 4493 1.401905 CGGAGGGAGTATTTTGCAAGC 59.598 52.381 0.00 0.00 0.00 4.01
3965 4494 2.678336 GACGGAGGGAGTATTTTGCAAG 59.322 50.000 0.00 0.00 0.00 4.01
3966 4495 2.617021 GGACGGAGGGAGTATTTTGCAA 60.617 50.000 0.00 0.00 0.00 4.08
3967 4496 1.065709 GGACGGAGGGAGTATTTTGCA 60.066 52.381 0.00 0.00 0.00 4.08
3968 4497 1.664873 GGACGGAGGGAGTATTTTGC 58.335 55.000 0.00 0.00 0.00 3.68
3969 4498 1.472728 CCGGACGGAGGGAGTATTTTG 60.473 57.143 4.40 0.00 37.50 2.44
3970 4499 0.828677 CCGGACGGAGGGAGTATTTT 59.171 55.000 4.40 0.00 37.50 1.82
3971 4500 0.032813 TCCGGACGGAGGGAGTATTT 60.033 55.000 9.76 0.00 39.76 1.40
3972 4501 0.032813 TTCCGGACGGAGGGAGTATT 60.033 55.000 13.64 0.00 46.06 1.89
3973 4502 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
3974 4503 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3975 4504 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3976 4505 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3977 4506 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3978 4507 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3979 4508 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3980 4509 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3981 4510 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
3982 4511 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
3983 4512 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
3984 4513 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
3985 4514 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
3986 4515 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
3987 4516 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
3988 4517 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
3989 4518 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
3990 4519 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
3991 4520 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
3992 4521 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
3993 4522 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
3994 4523 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
3995 4524 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
3996 4525 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
3997 4526 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
3998 4527 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
3999 4528 5.010933 GTCTAGATACATCCATTCCTCCGA 58.989 45.833 0.00 0.00 0.00 4.55
4000 4529 4.767409 TGTCTAGATACATCCATTCCTCCG 59.233 45.833 0.00 0.00 0.00 4.63
4001 4530 6.865834 ATGTCTAGATACATCCATTCCTCC 57.134 41.667 0.00 0.00 35.08 4.30
4030 4559 9.851686 TGCATAAAAATGGATGTATCTAGAACT 57.148 29.630 0.00 0.00 0.00 3.01
4037 4566 9.415544 GGAGAAATGCATAAAAATGGATGTATC 57.584 33.333 0.00 0.00 32.82 2.24
4038 4567 8.084073 CGGAGAAATGCATAAAAATGGATGTAT 58.916 33.333 0.00 0.00 32.82 2.29
4039 4568 7.284261 TCGGAGAAATGCATAAAAATGGATGTA 59.716 33.333 0.00 0.00 32.82 2.29
4040 4569 6.096705 TCGGAGAAATGCATAAAAATGGATGT 59.903 34.615 0.00 0.00 32.82 3.06
4041 4570 6.418819 GTCGGAGAAATGCATAAAAATGGATG 59.581 38.462 0.00 0.00 39.69 3.51
4042 4571 6.096705 TGTCGGAGAAATGCATAAAAATGGAT 59.903 34.615 0.00 0.00 39.69 3.41
4043 4572 5.417266 TGTCGGAGAAATGCATAAAAATGGA 59.583 36.000 0.00 0.00 39.69 3.41
4044 4573 5.649557 TGTCGGAGAAATGCATAAAAATGG 58.350 37.500 0.00 0.00 39.69 3.16
4045 4574 6.808212 ACTTGTCGGAGAAATGCATAAAAATG 59.192 34.615 0.00 0.00 39.69 2.32
4046 4575 6.924111 ACTTGTCGGAGAAATGCATAAAAAT 58.076 32.000 0.00 0.00 39.69 1.82
4047 4576 6.325919 ACTTGTCGGAGAAATGCATAAAAA 57.674 33.333 0.00 0.00 39.69 1.94
4048 4577 5.957842 ACTTGTCGGAGAAATGCATAAAA 57.042 34.783 0.00 0.00 39.69 1.52
4049 4578 7.624360 AATACTTGTCGGAGAAATGCATAAA 57.376 32.000 0.00 0.00 39.69 1.40
4050 4579 7.201696 GGAAATACTTGTCGGAGAAATGCATAA 60.202 37.037 0.00 0.00 39.69 1.90
4051 4580 6.260050 GGAAATACTTGTCGGAGAAATGCATA 59.740 38.462 0.00 0.00 39.69 3.14
4052 4581 5.066505 GGAAATACTTGTCGGAGAAATGCAT 59.933 40.000 0.00 0.00 39.69 3.96
4053 4582 4.394920 GGAAATACTTGTCGGAGAAATGCA 59.605 41.667 0.00 0.00 39.69 3.96
4054 4583 4.494199 CGGAAATACTTGTCGGAGAAATGC 60.494 45.833 0.00 0.00 39.69 3.56
4055 4584 4.034048 CCGGAAATACTTGTCGGAGAAATG 59.966 45.833 0.00 0.00 42.94 2.32
4056 4585 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
4057 4586 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
4058 4587 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
4059 4588 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
4060 4589 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
4061 4590 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
4062 4591 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
4063 4592 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4064 4593 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4065 4594 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4066 4595 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4067 4596 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4068 4597 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4069 4598 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4070 4599 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4071 4600 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4072 4601 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4073 4602 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4074 4603 1.929860 ATGTACTCCCTCCGTCCGGA 61.930 60.000 0.00 0.00 42.90 5.14
4075 4604 1.041447 AATGTACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
4076 4605 0.102481 CAATGTACTCCCTCCGTCCG 59.898 60.000 0.00 0.00 0.00 4.79
4077 4606 1.134788 CACAATGTACTCCCTCCGTCC 60.135 57.143 0.00 0.00 0.00 4.79
4078 4607 1.134788 CCACAATGTACTCCCTCCGTC 60.135 57.143 0.00 0.00 0.00 4.79
4079 4608 0.902531 CCACAATGTACTCCCTCCGT 59.097 55.000 0.00 0.00 0.00 4.69
4080 4609 0.178068 CCCACAATGTACTCCCTCCG 59.822 60.000 0.00 0.00 0.00 4.63
4081 4610 1.209747 GTCCCACAATGTACTCCCTCC 59.790 57.143 0.00 0.00 0.00 4.30
4082 4611 1.134788 CGTCCCACAATGTACTCCCTC 60.135 57.143 0.00 0.00 0.00 4.30
4083 4612 0.902531 CGTCCCACAATGTACTCCCT 59.097 55.000 0.00 0.00 0.00 4.20
4084 4613 0.107848 CCGTCCCACAATGTACTCCC 60.108 60.000 0.00 0.00 0.00 4.30
4085 4614 0.899720 TCCGTCCCACAATGTACTCC 59.100 55.000 0.00 0.00 0.00 3.85
4086 4615 1.134788 CCTCCGTCCCACAATGTACTC 60.135 57.143 0.00 0.00 0.00 2.59
4087 4616 0.902531 CCTCCGTCCCACAATGTACT 59.097 55.000 0.00 0.00 0.00 2.73
4088 4617 0.107848 CCCTCCGTCCCACAATGTAC 60.108 60.000 0.00 0.00 0.00 2.90
4089 4618 0.252330 TCCCTCCGTCCCACAATGTA 60.252 55.000 0.00 0.00 0.00 2.29
4090 4619 1.537889 TCCCTCCGTCCCACAATGT 60.538 57.895 0.00 0.00 0.00 2.71
4091 4620 1.221840 CTCCCTCCGTCCCACAATG 59.778 63.158 0.00 0.00 0.00 2.82
4092 4621 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
4093 4622 0.613853 CTACTCCCTCCGTCCCACAA 60.614 60.000 0.00 0.00 0.00 3.33
4094 4623 1.000019 CTACTCCCTCCGTCCCACA 60.000 63.158 0.00 0.00 0.00 4.17
4095 4624 0.257039 TACTACTCCCTCCGTCCCAC 59.743 60.000 0.00 0.00 0.00 4.61
4096 4625 0.257039 GTACTACTCCCTCCGTCCCA 59.743 60.000 0.00 0.00 0.00 4.37
4097 4626 0.550432 AGTACTACTCCCTCCGTCCC 59.450 60.000 0.00 0.00 0.00 4.46
4098 4627 2.426381 CAAAGTACTACTCCCTCCGTCC 59.574 54.545 0.00 0.00 0.00 4.79
4099 4628 3.087781 ACAAAGTACTACTCCCTCCGTC 58.912 50.000 0.00 0.00 0.00 4.79
4100 4629 3.087781 GACAAAGTACTACTCCCTCCGT 58.912 50.000 0.00 0.00 0.00 4.69
4101 4630 3.087031 TGACAAAGTACTACTCCCTCCG 58.913 50.000 0.00 0.00 0.00 4.63
4102 4631 5.479124 TTTGACAAAGTACTACTCCCTCC 57.521 43.478 0.00 0.00 0.00 4.30
4103 4632 5.245526 TCCTTTGACAAAGTACTACTCCCTC 59.754 44.000 23.07 0.00 36.77 4.30
4104 4633 5.152934 TCCTTTGACAAAGTACTACTCCCT 58.847 41.667 23.07 0.00 36.77 4.20
4105 4634 5.479124 TCCTTTGACAAAGTACTACTCCC 57.521 43.478 23.07 0.00 36.77 4.30
4106 4635 7.797038 TTTTCCTTTGACAAAGTACTACTCC 57.203 36.000 23.07 0.00 36.77 3.85
4107 4636 8.290325 CCATTTTCCTTTGACAAAGTACTACTC 58.710 37.037 23.07 0.00 36.77 2.59
4108 4637 7.996644 TCCATTTTCCTTTGACAAAGTACTACT 59.003 33.333 23.07 4.32 36.77 2.57
4109 4638 8.161699 TCCATTTTCCTTTGACAAAGTACTAC 57.838 34.615 23.07 0.00 36.77 2.73
4110 4639 8.792633 CATCCATTTTCCTTTGACAAAGTACTA 58.207 33.333 23.07 9.13 36.77 1.82
4111 4640 7.287696 ACATCCATTTTCCTTTGACAAAGTACT 59.712 33.333 23.07 0.00 36.77 2.73
4112 4641 7.433680 ACATCCATTTTCCTTTGACAAAGTAC 58.566 34.615 23.07 0.00 36.77 2.73
4113 4642 7.286546 TGACATCCATTTTCCTTTGACAAAGTA 59.713 33.333 23.07 8.07 36.77 2.24
4114 4643 6.098124 TGACATCCATTTTCCTTTGACAAAGT 59.902 34.615 23.07 4.90 36.77 2.66
4115 4644 6.514947 TGACATCCATTTTCCTTTGACAAAG 58.485 36.000 19.20 19.20 38.24 2.77
4116 4645 6.477053 TGACATCCATTTTCCTTTGACAAA 57.523 33.333 0.00 0.00 0.00 2.83
4117 4646 6.098124 AGTTGACATCCATTTTCCTTTGACAA 59.902 34.615 0.00 0.00 0.00 3.18
4118 4647 5.598005 AGTTGACATCCATTTTCCTTTGACA 59.402 36.000 0.00 0.00 0.00 3.58
4119 4648 6.015940 AGAGTTGACATCCATTTTCCTTTGAC 60.016 38.462 0.00 0.00 0.00 3.18
4120 4649 6.070656 AGAGTTGACATCCATTTTCCTTTGA 58.929 36.000 0.00 0.00 0.00 2.69
4121 4650 6.336842 AGAGTTGACATCCATTTTCCTTTG 57.663 37.500 0.00 0.00 0.00 2.77
4122 4651 6.739565 GCAAGAGTTGACATCCATTTTCCTTT 60.740 38.462 0.00 0.00 0.00 3.11
4123 4652 5.279156 GCAAGAGTTGACATCCATTTTCCTT 60.279 40.000 0.00 0.00 0.00 3.36
4124 4653 4.219288 GCAAGAGTTGACATCCATTTTCCT 59.781 41.667 0.00 0.00 0.00 3.36
4125 4654 4.022068 TGCAAGAGTTGACATCCATTTTCC 60.022 41.667 0.00 0.00 0.00 3.13
4126 4655 5.125100 TGCAAGAGTTGACATCCATTTTC 57.875 39.130 0.00 0.00 0.00 2.29
4143 4672 5.049818 GCAACTATAGCCTAGAACATGCAAG 60.050 44.000 0.00 0.00 0.00 4.01
4158 4687 7.776933 TTGAGACAAATAGCTGCAACTATAG 57.223 36.000 9.98 8.57 32.49 1.31
4165 4700 3.349927 AGCATTGAGACAAATAGCTGCA 58.650 40.909 1.02 0.00 0.00 4.41
4166 4701 3.626670 AGAGCATTGAGACAAATAGCTGC 59.373 43.478 0.00 0.00 29.75 5.25
4168 4703 5.095145 TGAGAGCATTGAGACAAATAGCT 57.905 39.130 0.00 0.00 31.20 3.32
4171 4706 6.705302 AGAGTTGAGAGCATTGAGACAAATA 58.295 36.000 0.00 0.00 0.00 1.40
4187 4722 3.756117 ACCCCTTTGCTTAAGAGTTGAG 58.244 45.455 6.67 0.00 35.80 3.02
4232 4768 6.156429 ACACCAAGGATCTAAACTAGGTTAGG 59.844 42.308 24.15 11.89 32.81 2.69
4233 4769 7.184067 ACACCAAGGATCTAAACTAGGTTAG 57.816 40.000 19.79 19.79 33.16 2.34
4234 4770 8.669055 TTACACCAAGGATCTAAACTAGGTTA 57.331 34.615 0.00 0.00 0.00 2.85
4235 4771 7.563724 TTACACCAAGGATCTAAACTAGGTT 57.436 36.000 0.00 0.00 0.00 3.50
4236 4772 7.182206 ACATTACACCAAGGATCTAAACTAGGT 59.818 37.037 0.00 0.00 0.00 3.08
4255 4791 4.079980 AGTGTGGTAGCACAACATTACA 57.920 40.909 28.02 1.26 41.52 2.41
4286 4822 7.939784 ATGTTACTAGAGTAGTCACATGACA 57.060 36.000 14.23 0.09 46.32 3.58
4316 4852 6.719370 CAGGGCAGGCCATAAATTATTAACTA 59.281 38.462 16.94 0.00 37.98 2.24
4317 4853 5.539955 CAGGGCAGGCCATAAATTATTAACT 59.460 40.000 16.94 0.00 37.98 2.24
4325 4980 2.135189 TCTACAGGGCAGGCCATAAAT 58.865 47.619 16.94 0.00 37.98 1.40
4328 4983 0.031111 AGTCTACAGGGCAGGCCATA 60.031 55.000 16.94 6.31 37.98 2.74
4331 4986 1.553690 TTCAGTCTACAGGGCAGGCC 61.554 60.000 4.33 4.33 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.