Multiple sequence alignment - TraesCS4D01G256800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G256800 chr4D 100.000 6185 0 0 1 6185 426610306 426604122 0.000000e+00 11422.0
1 TraesCS4D01G256800 chr4D 100.000 641 0 0 6379 7019 426603928 426603288 0.000000e+00 1184.0
2 TraesCS4D01G256800 chr4B 90.238 2018 126 35 635 2602 522419374 522417378 0.000000e+00 2569.0
3 TraesCS4D01G256800 chr4B 92.028 991 64 14 2618 3598 522416001 522415016 0.000000e+00 1378.0
4 TraesCS4D01G256800 chr4B 91.143 971 56 7 4386 5333 522413886 522412923 0.000000e+00 1290.0
5 TraesCS4D01G256800 chr4B 91.119 822 51 15 3590 4389 522414730 522413909 0.000000e+00 1094.0
6 TraesCS4D01G256800 chr4B 86.299 635 22 28 1 599 522420182 522419577 1.280000e-176 630.0
7 TraesCS4D01G256800 chr4B 90.854 328 12 8 5838 6159 522412519 522412204 2.340000e-114 424.0
8 TraesCS4D01G256800 chr4B 77.969 640 68 37 6414 7019 522412209 522411609 4.060000e-87 333.0
9 TraesCS4D01G256800 chr4B 83.544 316 31 7 5385 5693 522412926 522412625 6.940000e-70 276.0
10 TraesCS4D01G256800 chr4B 100.000 31 0 0 596 626 522419539 522419509 2.730000e-04 58.4
11 TraesCS4D01G256800 chr4A 90.188 1753 128 20 1666 3406 38819595 38821315 0.000000e+00 2244.0
12 TraesCS4D01G256800 chr4A 88.850 1713 106 37 4479 6161 38822260 38823917 0.000000e+00 2026.0
13 TraesCS4D01G256800 chr4A 91.676 925 58 14 3489 4396 38821310 38822232 0.000000e+00 1264.0
14 TraesCS4D01G256800 chr4A 87.446 932 52 24 718 1608 38818671 38819578 0.000000e+00 1013.0
15 TraesCS4D01G256800 chr4A 92.368 380 23 3 1 378 38816062 38816437 2.880000e-148 536.0
16 TraesCS4D01G256800 chr4A 86.913 298 21 10 6737 7019 38823941 38824235 1.140000e-82 318.0
17 TraesCS4D01G256800 chr4A 100.000 32 0 0 6414 6445 38823912 38823943 7.600000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G256800 chr4D 426603288 426610306 7018 True 6303.000000 11422 100.000000 1 7019 2 chr4D.!!$R1 7018
1 TraesCS4D01G256800 chr4B 522411609 522420182 8573 True 894.711111 2569 89.243778 1 7019 9 chr4B.!!$R1 7018
2 TraesCS4D01G256800 chr4A 38816062 38824235 8173 False 1065.885714 2244 91.063000 1 7019 7 chr4A.!!$F1 7018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 3074 0.107654 AGAAATCTGGCCGTAGCACC 60.108 55.000 0.00 0.00 42.56 5.01 F
1664 3971 1.142870 TGGGACCTTCACTCCAGTTTG 59.857 52.381 0.00 0.00 0.00 2.93 F
2157 4464 0.179936 ATGAGCAGTCTTAGCCCAGC 59.820 55.000 0.00 0.00 0.00 4.85 F
2202 4509 1.152830 GGGTCAGGGGCAAACAGAA 59.847 57.895 0.00 0.00 0.00 3.02 F
3049 6721 0.313987 AAAACCGTGCTTTGGCTAGC 59.686 50.000 6.04 6.04 41.59 3.42 F
3063 6739 1.064685 GGCTAGCCTGGTACACCATTT 60.065 52.381 27.17 0.00 46.46 2.32 F
4897 8927 1.067565 TGCTGCTCTCAGTTTACTCGG 60.068 52.381 0.00 0.00 42.29 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 4370 0.042131 TACGGGATCCCAGTGACCTT 59.958 55.000 30.42 8.64 35.37 3.50 R
3036 6708 0.035439 TACCAGGCTAGCCAAAGCAC 60.035 55.000 34.70 6.66 44.64 4.40 R
3038 6710 0.035439 TGTACCAGGCTAGCCAAAGC 60.035 55.000 34.70 19.84 41.99 3.51 R
4041 8019 0.179018 ACACACTGGCACCTTTCTCC 60.179 55.000 0.00 0.00 0.00 3.71 R
4951 8984 1.888215 AGCATGCTCCCGATAATGTG 58.112 50.000 16.30 0.00 0.00 3.21 R
5007 9048 2.756400 TGCCCTACCAAGGTGCAG 59.244 61.111 1.07 0.00 41.39 4.41 R
6392 10481 0.029567 GGCGATCCACTCACTACTCG 59.970 60.000 0.00 0.00 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 88 1.664151 GTTACAACCATCGTAGCCAGC 59.336 52.381 0.00 0.00 0.00 4.85
86 89 1.191535 TACAACCATCGTAGCCAGCT 58.808 50.000 0.00 0.00 0.00 4.24
87 90 1.191535 ACAACCATCGTAGCCAGCTA 58.808 50.000 0.00 0.00 0.00 3.32
158 172 0.610687 GGAGGTCCTGGTGAAGTCAG 59.389 60.000 0.00 0.00 0.00 3.51
196 211 0.329261 CTGGGGCAAGTTGGAGATGA 59.671 55.000 4.75 0.00 0.00 2.92
272 287 0.883833 CGAGGGCTTGCAGTTTGATT 59.116 50.000 0.00 0.00 0.00 2.57
292 307 7.991084 TGATTGTTGAAACTGATTCTGAGAT 57.009 32.000 0.00 0.00 38.92 2.75
293 308 7.813645 TGATTGTTGAAACTGATTCTGAGATG 58.186 34.615 0.00 0.00 38.92 2.90
332 347 1.293179 CAGGGACGATCACTGTGCA 59.707 57.895 2.12 0.00 42.79 4.57
337 352 1.135915 GGACGATCACTGTGCAGAGAT 59.864 52.381 19.13 10.96 40.59 2.75
345 360 2.106566 ACTGTGCAGAGATCAGTAGGG 58.893 52.381 19.13 0.00 40.06 3.53
427 2295 1.254026 GGTACCAAGGAAGGCCAAAC 58.746 55.000 7.15 0.00 36.29 2.93
453 2324 3.928375 CACATTATTGTGCCAAAGGAAGC 59.072 43.478 4.90 0.00 46.20 3.86
455 2326 2.300956 TATTGTGCCAAAGGAAGCCA 57.699 45.000 0.00 0.00 0.00 4.75
456 2327 1.422531 ATTGTGCCAAAGGAAGCCAA 58.577 45.000 0.00 0.00 0.00 4.52
457 2328 0.752054 TTGTGCCAAAGGAAGCCAAG 59.248 50.000 0.00 0.00 0.00 3.61
458 2329 1.114722 TGTGCCAAAGGAAGCCAAGG 61.115 55.000 0.00 0.00 0.00 3.61
459 2330 2.209315 TGCCAAAGGAAGCCAAGGC 61.209 57.895 2.02 2.02 37.44 4.35
460 2331 2.947532 GCCAAAGGAAGCCAAGGCC 61.948 63.158 7.62 0.00 43.17 5.19
629 2691 3.325716 AGCAAACTACTCCCTCCGTAAAA 59.674 43.478 0.00 0.00 0.00 1.52
684 2748 6.492007 ACAGATCATGCGATATTTTCCATC 57.508 37.500 0.00 0.00 29.66 3.51
711 2775 3.363341 TCGAATTTTGTGGTTTCTGCC 57.637 42.857 0.00 0.00 0.00 4.85
786 3020 0.868406 GTGGCTTTCTTCAGACACGG 59.132 55.000 0.00 0.00 43.02 4.94
796 3030 4.008933 AGACACGGCAGGCAGGTC 62.009 66.667 6.85 6.85 0.00 3.85
822 3064 1.276421 AGTGGTCCGTCAGAAATCTGG 59.724 52.381 10.37 0.00 43.91 3.86
832 3074 0.107654 AGAAATCTGGCCGTAGCACC 60.108 55.000 0.00 0.00 42.56 5.01
918 3166 3.537874 CGGACGGTCTCCCATCCC 61.538 72.222 8.23 0.00 35.21 3.85
919 3167 3.537874 GGACGGTCTCCCATCCCG 61.538 72.222 8.23 0.00 46.93 5.14
920 3168 4.222847 GACGGTCTCCCATCCCGC 62.223 72.222 0.00 0.00 45.49 6.13
924 3172 4.176752 GTCTCCCATCCCGCCACC 62.177 72.222 0.00 0.00 0.00 4.61
926 3174 4.489771 CTCCCATCCCGCCACCAC 62.490 72.222 0.00 0.00 0.00 4.16
929 3177 3.716195 CCATCCCGCCACCACTCA 61.716 66.667 0.00 0.00 0.00 3.41
930 3178 2.436646 CATCCCGCCACCACTCAC 60.437 66.667 0.00 0.00 0.00 3.51
932 3180 2.224159 ATCCCGCCACCACTCACTT 61.224 57.895 0.00 0.00 0.00 3.16
934 3182 2.358737 CCGCCACCACTCACTTCC 60.359 66.667 0.00 0.00 0.00 3.46
937 3185 1.507141 CGCCACCACTCACTTCCAAC 61.507 60.000 0.00 0.00 0.00 3.77
1097 3366 3.726517 CAGGAAGCCGGTGCGTTG 61.727 66.667 1.90 0.00 44.33 4.10
1105 3374 4.287967 CGGTGCGTTGCGTTCGTT 62.288 61.111 0.00 0.00 0.00 3.85
1131 3400 2.302733 CCAAAATTTCCCACTTCCCAGG 59.697 50.000 0.00 0.00 0.00 4.45
1245 3516 5.236478 ACCACTTCTTTGTTGATTAGACGTG 59.764 40.000 0.00 0.00 37.70 4.49
1382 3654 1.836166 CTTCTGATTGGAGCTCCCTCA 59.164 52.381 29.95 27.29 39.96 3.86
1390 3662 1.909302 TGGAGCTCCCTCAACCTTTAG 59.091 52.381 29.95 0.00 39.96 1.85
1408 3714 6.780522 ACCTTTAGCTTTGGATTTAAGGAACA 59.219 34.615 0.00 0.00 35.71 3.18
1412 3718 9.747898 TTTAGCTTTGGATTTAAGGAACATAGA 57.252 29.630 0.00 0.00 0.00 1.98
1438 3744 8.999431 ACATTTTCGAGCTATAACTTTCTGAAA 58.001 29.630 2.44 2.44 0.00 2.69
1441 3747 9.825972 TTTTCGAGCTATAACTTTCTGAAATTG 57.174 29.630 2.88 0.00 0.00 2.32
1466 3772 6.296803 GGAGGTCTAAAAAGTTTCCTGAAGA 58.703 40.000 0.00 0.00 0.00 2.87
1473 3779 8.770828 TCTAAAAAGTTTCCTGAAGATGTAACG 58.229 33.333 0.00 0.00 0.00 3.18
1498 3805 6.463614 GCCCTTTTCTCTTCTCATATCTGCTA 60.464 42.308 0.00 0.00 0.00 3.49
1608 3915 6.349300 GGGTATTCATACTTCTTTCTCTGCA 58.651 40.000 0.00 0.00 33.81 4.41
1610 3917 7.041508 GGGTATTCATACTTCTTTCTCTGCATG 60.042 40.741 0.00 0.00 33.81 4.06
1611 3918 7.712639 GGTATTCATACTTCTTTCTCTGCATGA 59.287 37.037 0.00 0.00 33.81 3.07
1664 3971 1.142870 TGGGACCTTCACTCCAGTTTG 59.857 52.381 0.00 0.00 0.00 2.93
1676 3983 8.795842 TTCACTCCAGTTTGTTTAGTAGAAAA 57.204 30.769 0.00 0.00 0.00 2.29
1712 4019 4.882842 TTCACTGGTGAATGCTACTGTA 57.117 40.909 11.53 0.00 43.90 2.74
1713 4020 4.456280 TCACTGGTGAATGCTACTGTAG 57.544 45.455 10.48 10.48 36.53 2.74
1714 4021 3.832490 TCACTGGTGAATGCTACTGTAGT 59.168 43.478 15.71 0.00 36.53 2.73
1715 4022 4.283467 TCACTGGTGAATGCTACTGTAGTT 59.717 41.667 15.71 3.78 36.53 2.24
1716 4023 4.997395 CACTGGTGAATGCTACTGTAGTTT 59.003 41.667 15.71 10.04 0.00 2.66
1721 4028 8.039603 TGGTGAATGCTACTGTAGTTTAAATG 57.960 34.615 15.71 0.00 0.00 2.32
1759 4066 6.260936 GCTTCAGCTGTATGTATGGTGTATTT 59.739 38.462 14.67 0.00 38.21 1.40
1771 4078 4.032960 TGGTGTATTTGCTCAGTTCCAT 57.967 40.909 0.00 0.00 0.00 3.41
1789 4096 7.655328 CAGTTCCATCTTCTTGGAGTATATGTC 59.345 40.741 0.00 0.00 46.22 3.06
1796 4103 7.717568 TCTTCTTGGAGTATATGTCAGCTTAC 58.282 38.462 0.00 0.00 0.00 2.34
1826 4133 7.543520 GCTTCTTTTTATTTGTAATGCAGCTCT 59.456 33.333 0.00 0.00 0.00 4.09
1841 4148 2.096565 CAGCTCTGTGTTTGATGTCACG 60.097 50.000 0.00 0.00 37.38 4.35
1920 4227 7.595130 GGTTGCCATTTTATACTAAAGCTATGC 59.405 37.037 0.00 0.00 0.00 3.14
1932 4239 4.382345 AAAGCTATGCTCCAAATTCTGC 57.618 40.909 0.00 0.00 38.25 4.26
1959 4266 8.455682 TGTCGTAAACAGAAGATTTCAGTTTTT 58.544 29.630 14.58 0.00 43.86 1.94
2006 4313 6.811253 TGTTTCGTTACCTCTATGCAAATT 57.189 33.333 0.00 0.00 0.00 1.82
2063 4370 6.742559 ACTTGAAGAGGTCCTACTTTAACA 57.257 37.500 0.00 0.00 0.00 2.41
2072 4379 4.995487 GGTCCTACTTTAACAAGGTCACTG 59.005 45.833 0.00 0.00 33.82 3.66
2083 4390 0.397254 AGGTCACTGGGATCCCGTAG 60.397 60.000 26.03 20.23 39.42 3.51
2157 4464 0.179936 ATGAGCAGTCTTAGCCCAGC 59.820 55.000 0.00 0.00 0.00 4.85
2163 4470 1.483827 CAGTCTTAGCCCAGCTGATGA 59.516 52.381 17.39 0.00 40.10 2.92
2187 4494 3.306472 TTTAAACTTCTGGTGCTGGGT 57.694 42.857 0.00 0.00 0.00 4.51
2202 4509 1.152830 GGGTCAGGGGCAAACAGAA 59.847 57.895 0.00 0.00 0.00 3.02
2203 4510 1.179174 GGGTCAGGGGCAAACAGAAC 61.179 60.000 0.00 0.00 0.00 3.01
2220 4527 5.459505 ACAGAACCATAGCCTAGTCTATGT 58.540 41.667 17.24 2.44 42.59 2.29
2224 4531 8.589338 CAGAACCATAGCCTAGTCTATGTTAAT 58.411 37.037 17.24 3.22 42.59 1.40
2314 4621 4.569719 ACGACATTTCCTTAACAGGGAT 57.430 40.909 0.00 0.00 41.25 3.85
2482 4789 8.408043 TGACCTTCATCAAATTTACACAATCT 57.592 30.769 0.00 0.00 0.00 2.40
2579 4887 6.408092 GTTCATCCAACTACATATGGGACAGA 60.408 42.308 7.80 3.33 34.74 3.41
2602 4910 4.768968 AGGAAACAGCAACAGAAAGCATAT 59.231 37.500 0.00 0.00 0.00 1.78
2603 4911 4.860907 GGAAACAGCAACAGAAAGCATATG 59.139 41.667 0.00 0.00 0.00 1.78
2604 4912 5.458041 AAACAGCAACAGAAAGCATATGT 57.542 34.783 4.29 0.00 0.00 2.29
2605 4913 4.430137 ACAGCAACAGAAAGCATATGTG 57.570 40.909 4.29 0.00 0.00 3.21
2606 4914 3.822735 ACAGCAACAGAAAGCATATGTGT 59.177 39.130 4.29 0.00 0.00 3.72
2607 4915 5.003160 ACAGCAACAGAAAGCATATGTGTA 58.997 37.500 4.29 0.00 0.00 2.90
2609 4917 6.823182 ACAGCAACAGAAAGCATATGTGTATA 59.177 34.615 4.29 0.00 0.00 1.47
2610 4918 7.500227 ACAGCAACAGAAAGCATATGTGTATAT 59.500 33.333 4.29 0.00 0.00 0.86
2611 4919 8.347771 CAGCAACAGAAAGCATATGTGTATATT 58.652 33.333 4.29 0.00 0.00 1.28
2612 4920 8.347771 AGCAACAGAAAGCATATGTGTATATTG 58.652 33.333 4.29 3.49 0.00 1.90
2613 4921 7.592533 GCAACAGAAAGCATATGTGTATATTGG 59.407 37.037 4.29 0.00 0.00 3.16
2614 4922 7.750229 ACAGAAAGCATATGTGTATATTGGG 57.250 36.000 4.29 0.00 0.00 4.12
2615 4923 7.290061 ACAGAAAGCATATGTGTATATTGGGT 58.710 34.615 4.29 0.00 0.00 4.51
2616 4924 8.436778 ACAGAAAGCATATGTGTATATTGGGTA 58.563 33.333 4.29 0.00 0.00 3.69
2639 6308 9.601217 GGTATATAACTTATGGGTCATGATGAC 57.399 37.037 16.95 16.95 46.23 3.06
2657 6326 5.243730 TGATGACGGAGCAATATATCAGTGA 59.756 40.000 0.00 0.00 0.00 3.41
2663 6332 6.258727 ACGGAGCAATATATCAGTGAAAAGTG 59.741 38.462 0.00 0.00 0.00 3.16
2688 6357 7.171508 TGCTTTGATATTAGGATCAAACTAGCG 59.828 37.037 7.33 0.81 46.12 4.26
2767 6436 9.882996 AAATAGGTTTTTACTACTTGTTAACGC 57.117 29.630 0.26 0.00 0.00 4.84
2783 6452 6.771076 TGTTAACGCAACTCTATTGCTTATG 58.229 36.000 9.72 0.00 42.87 1.90
2802 6471 8.141268 TGCTTATGGTTTTAAAATATAGCTGGC 58.859 33.333 3.52 9.31 0.00 4.85
2804 6473 8.540507 TTATGGTTTTAAAATATAGCTGGCCA 57.459 30.769 4.71 4.71 0.00 5.36
2861 6531 3.661944 CTGCATCATGATAGTCTGGACC 58.338 50.000 8.15 0.00 0.00 4.46
2882 6552 6.541278 GGACCCACCAAAATAAGTGTATAGAC 59.459 42.308 0.00 0.00 38.79 2.59
2883 6553 7.266905 ACCCACCAAAATAAGTGTATAGACT 57.733 36.000 0.00 0.00 31.88 3.24
2921 6593 8.782144 CCAATTAAGATGAGATTTTCTAGCCTC 58.218 37.037 0.00 0.00 0.00 4.70
2922 6594 9.334947 CAATTAAGATGAGATTTTCTAGCCTCA 57.665 33.333 0.00 0.00 39.60 3.86
2988 6660 5.413309 AGTTCTGTACTTCTGCATTAGCT 57.587 39.130 0.00 0.00 36.04 3.32
2995 6667 3.960571 ACTTCTGCATTAGCTCCATTGT 58.039 40.909 0.00 0.00 42.74 2.71
3036 6708 6.475727 ACATATGTATCGTCTCTTCAAAACCG 59.524 38.462 6.56 0.00 0.00 4.44
3037 6709 4.247267 TGTATCGTCTCTTCAAAACCGT 57.753 40.909 0.00 0.00 0.00 4.83
3038 6710 3.985279 TGTATCGTCTCTTCAAAACCGTG 59.015 43.478 0.00 0.00 0.00 4.94
3039 6711 1.214367 TCGTCTCTTCAAAACCGTGC 58.786 50.000 0.00 0.00 0.00 5.34
3040 6712 1.202486 TCGTCTCTTCAAAACCGTGCT 60.202 47.619 0.00 0.00 0.00 4.40
3047 6719 1.681538 TCAAAACCGTGCTTTGGCTA 58.318 45.000 0.00 0.00 39.59 3.93
3048 6720 1.606668 TCAAAACCGTGCTTTGGCTAG 59.393 47.619 0.00 0.00 39.59 3.42
3049 6721 0.313987 AAAACCGTGCTTTGGCTAGC 59.686 50.000 6.04 6.04 41.59 3.42
3052 6728 2.401766 CCGTGCTTTGGCTAGCCTG 61.402 63.158 33.07 22.82 40.49 4.85
3063 6739 1.064685 GGCTAGCCTGGTACACCATTT 60.065 52.381 27.17 0.00 46.46 2.32
3110 6786 5.336451 GCTCAAGGTGGTTAAATTTACCTGG 60.336 44.000 10.47 8.20 42.47 4.45
3111 6787 5.954757 TCAAGGTGGTTAAATTTACCTGGA 58.045 37.500 10.47 10.18 42.47 3.86
3117 6793 8.154203 AGGTGGTTAAATTTACCTGGATTTTTG 58.846 33.333 9.17 0.00 41.76 2.44
3131 6807 5.083122 TGGATTTTTGAATAAGGAGTGGCA 58.917 37.500 0.00 0.00 0.00 4.92
3161 6838 6.180472 GGGACAGAATGAGGAAAATAAGTCA 58.820 40.000 0.00 0.00 39.69 3.41
3205 6883 5.048224 GCATCCTTGAGATATGACATTTGGG 60.048 44.000 0.00 0.00 32.37 4.12
3248 6926 6.150140 GGGCTTGGATCAGTAGCTAATTAATG 59.850 42.308 0.00 0.00 35.30 1.90
3298 6976 8.322906 TGAAAATCAACACATAAGAGTAGTGG 57.677 34.615 0.00 0.00 37.58 4.00
3371 7050 7.682787 AGTAAAGAGAGGTGATGGTGATATT 57.317 36.000 0.00 0.00 0.00 1.28
3380 7059 5.104360 AGGTGATGGTGATATTACTGCAGTT 60.104 40.000 27.06 10.85 0.00 3.16
3449 7128 5.880332 CAGCTAACTAAATTTCAGCTACCCA 59.120 40.000 13.14 0.00 40.50 4.51
3467 7146 8.170061 AGCTACCCATATCTAATTGCCAAATAA 58.830 33.333 0.00 0.00 0.00 1.40
3531 7210 1.606668 ACTGGCGGTAATTGTTGTGTG 59.393 47.619 0.00 0.00 0.00 3.82
3539 7218 4.095632 CGGTAATTGTTGTGTGCATCCATA 59.904 41.667 0.00 0.00 0.00 2.74
3540 7219 5.392487 CGGTAATTGTTGTGTGCATCCATAA 60.392 40.000 0.00 0.00 0.00 1.90
3673 7646 3.199880 AGCATGGAGGTACAAGCATAC 57.800 47.619 0.00 0.00 37.52 2.39
3691 7664 9.683069 CAAGCATACCTTACCAATGATTTAATC 57.317 33.333 0.00 0.00 27.35 1.75
3872 7846 7.387119 TGATCAAAGAGAAAGATGATTGGTG 57.613 36.000 0.00 0.00 32.90 4.17
3892 7866 9.798994 ATTGGTGTTAGTATAGTTAAGAAGTCG 57.201 33.333 0.00 0.00 0.00 4.18
3893 7867 8.565896 TGGTGTTAGTATAGTTAAGAAGTCGA 57.434 34.615 0.00 0.00 0.00 4.20
3894 7868 9.182214 TGGTGTTAGTATAGTTAAGAAGTCGAT 57.818 33.333 0.00 0.00 0.00 3.59
3896 7870 9.448294 GTGTTAGTATAGTTAAGAAGTCGATGG 57.552 37.037 0.00 0.00 0.00 3.51
3996 7974 3.211045 GGTCAGTTGCTGAACCTGTTTA 58.789 45.455 2.96 0.00 41.87 2.01
4036 8014 9.844257 ATTAATAGTTGGATCTTTCTTCTCCAG 57.156 33.333 0.00 0.00 40.06 3.86
4038 8016 7.979786 ATAGTTGGATCTTTCTTCTCCAGTA 57.020 36.000 0.00 0.00 40.06 2.74
4039 8017 6.688073 AGTTGGATCTTTCTTCTCCAGTAA 57.312 37.500 0.00 0.00 40.06 2.24
4040 8018 7.264294 AGTTGGATCTTTCTTCTCCAGTAAT 57.736 36.000 0.00 0.00 40.06 1.89
4041 8019 7.108847 AGTTGGATCTTTCTTCTCCAGTAATG 58.891 38.462 0.00 0.00 40.06 1.90
4042 8020 5.994250 TGGATCTTTCTTCTCCAGTAATGG 58.006 41.667 1.82 1.82 34.17 3.16
4043 8021 5.726308 TGGATCTTTCTTCTCCAGTAATGGA 59.274 40.000 12.11 12.11 34.17 3.41
4055 8047 3.012518 CAGTAATGGAGAAAGGTGCCAG 58.987 50.000 0.00 0.00 34.74 4.85
4065 8057 2.256117 AAGGTGCCAGTGTGTAGAAC 57.744 50.000 0.00 0.00 0.00 3.01
4087 8079 6.530913 ACATATGTATGTCAACGCTGAATC 57.469 37.500 6.56 0.00 42.96 2.52
4117 8110 2.582052 TGAATGAAAAGGTCGCAGGTT 58.418 42.857 0.00 0.00 0.00 3.50
4134 8127 3.307242 CAGGTTGCTACAATCTTAGTCGC 59.693 47.826 0.00 0.00 0.00 5.19
4157 8151 9.603298 TCGCGTGTATATTTTATTGAGTAGTAG 57.397 33.333 5.77 0.00 0.00 2.57
4178 8172 3.262405 AGTGATTAAGGCCGGTAACTTGA 59.738 43.478 15.43 9.61 0.00 3.02
4186 8180 1.664151 GCCGGTAACTTGATACACTGC 59.336 52.381 1.90 0.00 0.00 4.40
4264 8258 2.158475 TGTTCCCTTCCTTGTTGCTGAT 60.158 45.455 0.00 0.00 0.00 2.90
4380 8401 6.968263 TCCATTGTTGGTTGATCAAAGTTA 57.032 33.333 10.35 0.00 44.06 2.24
4454 8475 8.552083 TGGTATCATCTGCATGTGTTATTATC 57.448 34.615 0.00 0.00 0.00 1.75
4627 8657 8.470002 GTGGATCATTTGATAAAAGCTTACCTT 58.530 33.333 0.00 0.00 34.37 3.50
4740 8770 7.743116 TCCTACAAAATATCTGAAGGGTGTA 57.257 36.000 0.00 0.00 0.00 2.90
4896 8926 2.257894 CTGCTGCTCTCAGTTTACTCG 58.742 52.381 0.00 0.00 42.29 4.18
4897 8927 1.067565 TGCTGCTCTCAGTTTACTCGG 60.068 52.381 0.00 0.00 42.29 4.63
4918 8951 3.127030 GGTCTTTCTTAAATGGCTCGTGG 59.873 47.826 0.00 0.00 0.00 4.94
4919 8952 3.127030 GTCTTTCTTAAATGGCTCGTGGG 59.873 47.826 0.00 0.00 0.00 4.61
4931 8964 1.471287 GCTCGTGGGTAATTTGGTTCC 59.529 52.381 0.00 0.00 0.00 3.62
4951 8984 3.625764 TCCGACCGAAATTCATGGAATTC 59.374 43.478 4.81 0.00 40.77 2.17
5007 9048 4.662145 GGCAGTTCTGCATACAAACATAC 58.338 43.478 23.23 1.30 36.33 2.39
5133 9179 4.209911 GTGACGGTTTTGTACTAACCTCAC 59.790 45.833 24.87 24.87 42.31 3.51
5172 9218 0.035152 ATTGCTCGGCCTGACAATGA 60.035 50.000 11.76 0.00 31.50 2.57
5334 9384 0.252696 TGGGGCTACTGTCCACTGAT 60.253 55.000 0.00 0.00 40.42 2.90
5347 9397 0.459237 CACTGATCTGTCTCCCGCAC 60.459 60.000 1.69 0.00 0.00 5.34
5350 9400 0.247460 TGATCTGTCTCCCGCACTTG 59.753 55.000 0.00 0.00 0.00 3.16
5366 9416 3.390135 CACTTGTTCTCGTCCTTGCTTA 58.610 45.455 0.00 0.00 0.00 3.09
5378 9428 2.499289 TCCTTGCTTAGAGAGAGCCTTG 59.501 50.000 0.00 0.00 39.38 3.61
5392 9442 0.902531 GCCTTGGACCTACTGTAGCA 59.097 55.000 9.35 0.00 0.00 3.49
5423 9473 3.150903 ATGGGTGCTTGGCAGTGGT 62.151 57.895 0.00 0.00 40.08 4.16
5424 9474 1.788518 ATGGGTGCTTGGCAGTGGTA 61.789 55.000 0.00 0.00 40.08 3.25
5425 9475 1.000896 GGGTGCTTGGCAGTGGTAT 60.001 57.895 0.00 0.00 40.08 2.73
5470 9520 0.175760 TATGCCGGTGCTTCTCTGTC 59.824 55.000 1.90 0.00 38.71 3.51
5503 9553 0.843309 TGACTTGTGGCTTTCCTGGA 59.157 50.000 0.00 0.00 0.00 3.86
5540 9590 5.811100 GCTAGGCCCATAAATTCGATAGTAC 59.189 44.000 0.00 0.00 37.40 2.73
5565 9615 6.804770 AGTATACGCAGATGTAGAACCTAG 57.195 41.667 0.00 0.00 0.00 3.02
5570 9621 2.036604 GCAGATGTAGAACCTAGGAGCC 59.963 54.545 17.98 3.67 0.00 4.70
5575 9626 2.832129 TGTAGAACCTAGGAGCCTTGTG 59.168 50.000 17.98 0.00 0.00 3.33
5578 9629 2.711547 AGAACCTAGGAGCCTTGTGTTT 59.288 45.455 17.98 0.00 0.00 2.83
5580 9631 2.339769 ACCTAGGAGCCTTGTGTTTCT 58.660 47.619 17.98 0.00 0.00 2.52
5582 9633 3.908103 ACCTAGGAGCCTTGTGTTTCTTA 59.092 43.478 17.98 0.00 0.00 2.10
5583 9634 4.536489 ACCTAGGAGCCTTGTGTTTCTTAT 59.464 41.667 17.98 0.00 0.00 1.73
5592 9643 1.892474 TGTGTTTCTTATGGGCTTGCC 59.108 47.619 2.49 2.49 0.00 4.52
5608 9659 0.754957 TGCCAGGCCCATAAATTCGG 60.755 55.000 9.64 0.00 0.00 4.30
5609 9660 0.467290 GCCAGGCCCATAAATTCGGA 60.467 55.000 0.00 0.00 0.00 4.55
5612 9663 2.558359 CCAGGCCCATAAATTCGGAATC 59.442 50.000 0.00 0.00 0.00 2.52
5614 9665 3.828451 CAGGCCCATAAATTCGGAATCAT 59.172 43.478 0.00 0.00 0.00 2.45
5615 9666 5.009631 CAGGCCCATAAATTCGGAATCATA 58.990 41.667 0.00 1.60 0.00 2.15
5616 9667 5.124457 CAGGCCCATAAATTCGGAATCATAG 59.876 44.000 0.00 0.00 0.00 2.23
5619 9670 6.316390 GGCCCATAAATTCGGAATCATAGTAG 59.684 42.308 3.28 0.00 0.00 2.57
5623 9679 8.950210 CCATAAATTCGGAATCATAGTAGCATT 58.050 33.333 3.28 0.00 0.00 3.56
5639 9695 7.813852 AGTAGCATTATCGGTCGAATTTATC 57.186 36.000 0.00 0.00 0.00 1.75
5693 9750 8.993121 CAATACAGAGTTGAACTAGAATGTGTT 58.007 33.333 0.00 3.63 0.00 3.32
5697 9754 9.209175 ACAGAGTTGAACTAGAATGTGTTAATC 57.791 33.333 0.00 0.00 0.00 1.75
5698 9755 9.429359 CAGAGTTGAACTAGAATGTGTTAATCT 57.571 33.333 0.00 0.00 0.00 2.40
5699 9756 9.429359 AGAGTTGAACTAGAATGTGTTAATCTG 57.571 33.333 0.00 0.00 0.00 2.90
5700 9757 9.209175 GAGTTGAACTAGAATGTGTTAATCTGT 57.791 33.333 0.00 0.00 0.00 3.41
5701 9758 8.993121 AGTTGAACTAGAATGTGTTAATCTGTG 58.007 33.333 0.00 0.00 0.00 3.66
5702 9759 8.774586 GTTGAACTAGAATGTGTTAATCTGTGT 58.225 33.333 0.00 0.00 0.00 3.72
5744 9802 5.699915 CAGAGTCTGAATTCTGAAAGAAGCA 59.300 40.000 15.46 0.00 45.11 3.91
5745 9803 6.204301 CAGAGTCTGAATTCTGAAAGAAGCAA 59.796 38.462 15.46 0.00 45.11 3.91
5746 9804 7.255035 CAGAGTCTGAATTCTGAAAGAAGCAAA 60.255 37.037 15.46 0.00 45.11 3.68
5753 9811 4.989279 TCTGAAAGAAGCAAAGCAGTTT 57.011 36.364 0.00 0.00 42.31 2.66
5755 9813 5.104374 TCTGAAAGAAGCAAAGCAGTTTTG 58.896 37.500 5.40 5.40 42.31 2.44
5756 9814 4.819769 TGAAAGAAGCAAAGCAGTTTTGT 58.180 34.783 11.01 0.00 46.35 2.83
5757 9815 5.960113 TGAAAGAAGCAAAGCAGTTTTGTA 58.040 33.333 11.01 0.00 46.35 2.41
5758 9816 5.804979 TGAAAGAAGCAAAGCAGTTTTGTAC 59.195 36.000 11.01 3.97 46.35 2.90
5760 9818 6.693315 AAGAAGCAAAGCAGTTTTGTACTA 57.307 33.333 11.01 0.00 46.35 1.82
5761 9819 6.061231 AGAAGCAAAGCAGTTTTGTACTAC 57.939 37.500 11.01 0.00 46.35 2.73
5762 9820 5.823045 AGAAGCAAAGCAGTTTTGTACTACT 59.177 36.000 11.01 0.00 46.35 2.57
5763 9821 5.424121 AGCAAAGCAGTTTTGTACTACTG 57.576 39.130 11.01 14.86 46.35 2.74
5770 9828 5.922739 CAGTTTTGTACTACTGCATCACA 57.077 39.130 9.37 0.00 35.79 3.58
5771 9829 6.486253 CAGTTTTGTACTACTGCATCACAT 57.514 37.500 9.37 0.00 35.79 3.21
5772 9830 6.902341 CAGTTTTGTACTACTGCATCACATT 58.098 36.000 9.37 0.00 35.79 2.71
5773 9831 7.362662 CAGTTTTGTACTACTGCATCACATTT 58.637 34.615 9.37 0.00 35.79 2.32
5774 9832 7.324375 CAGTTTTGTACTACTGCATCACATTTG 59.676 37.037 9.37 0.00 35.79 2.32
5775 9833 5.878332 TTGTACTACTGCATCACATTTGG 57.122 39.130 0.00 0.00 0.00 3.28
5790 9848 5.069648 TCACATTTGGACATTTGGTTAAGCA 59.930 36.000 2.54 2.54 0.00 3.91
5794 9857 7.818930 ACATTTGGACATTTGGTTAAGCATTAG 59.181 33.333 8.40 3.93 0.00 1.73
5820 9883 7.721399 GCCTGATGATTTTCTAGGGAAATCTTA 59.279 37.037 22.05 11.34 40.57 2.10
5835 9898 8.953313 AGGGAAATCTTAACGTTTTATTACTGG 58.047 33.333 5.91 0.00 0.00 4.00
5836 9899 7.699391 GGGAAATCTTAACGTTTTATTACTGGC 59.301 37.037 5.91 0.00 0.00 4.85
5859 9922 2.616330 CGTGCAGGTTTGGTGCGAT 61.616 57.895 0.00 0.00 44.35 4.58
6044 10110 5.761234 AGTAGGAGTAGAATCTACGCTTCTG 59.239 44.000 20.39 0.00 38.58 3.02
6057 10123 1.129998 CGCTTCTGTTTCTCCATGCAG 59.870 52.381 0.00 0.00 0.00 4.41
6058 10124 2.157738 GCTTCTGTTTCTCCATGCAGT 58.842 47.619 0.00 0.00 0.00 4.40
6099 10185 8.856153 TTTTACTCATTGCAAGACCAGTAATA 57.144 30.769 16.73 12.21 0.00 0.98
6154 10243 2.092049 ACCAGCCACACATCATGATGAT 60.092 45.455 36.37 22.88 41.20 2.45
6155 10244 2.552743 CCAGCCACACATCATGATGATC 59.447 50.000 36.37 20.49 41.20 2.92
6156 10245 3.477530 CAGCCACACATCATGATGATCT 58.522 45.455 36.37 21.99 41.20 2.75
6157 10246 3.498777 CAGCCACACATCATGATGATCTC 59.501 47.826 36.37 21.36 41.20 2.75
6158 10247 3.391626 AGCCACACATCATGATGATCTCT 59.608 43.478 36.37 22.85 41.20 3.10
6159 10248 3.747010 GCCACACATCATGATGATCTCTC 59.253 47.826 36.37 18.57 41.20 3.20
6160 10249 4.503469 GCCACACATCATGATGATCTCTCT 60.503 45.833 36.37 13.93 41.20 3.10
6161 10250 5.231702 CCACACATCATGATGATCTCTCTC 58.768 45.833 36.37 0.00 41.20 3.20
6162 10251 5.011227 CCACACATCATGATGATCTCTCTCT 59.989 44.000 36.37 12.53 41.20 3.10
6163 10252 6.153756 CACACATCATGATGATCTCTCTCTC 58.846 44.000 36.37 0.00 41.20 3.20
6164 10253 5.244402 ACACATCATGATGATCTCTCTCTCC 59.756 44.000 36.37 0.00 41.20 3.71
6165 10254 4.773674 ACATCATGATGATCTCTCTCTCCC 59.226 45.833 36.37 0.00 41.20 4.30
6166 10255 4.745484 TCATGATGATCTCTCTCTCCCT 57.255 45.455 0.00 0.00 0.00 4.20
6167 10256 4.665451 TCATGATGATCTCTCTCTCCCTC 58.335 47.826 0.00 0.00 0.00 4.30
6168 10257 4.354686 TCATGATGATCTCTCTCTCCCTCT 59.645 45.833 0.00 0.00 0.00 3.69
6169 10258 4.371624 TGATGATCTCTCTCTCCCTCTC 57.628 50.000 0.00 0.00 0.00 3.20
6170 10259 3.982730 TGATGATCTCTCTCTCCCTCTCT 59.017 47.826 0.00 0.00 0.00 3.10
6171 10260 4.042062 TGATGATCTCTCTCTCCCTCTCTC 59.958 50.000 0.00 0.00 0.00 3.20
6172 10261 3.668821 TGATCTCTCTCTCCCTCTCTCT 58.331 50.000 0.00 0.00 0.00 3.10
6173 10262 3.648067 TGATCTCTCTCTCCCTCTCTCTC 59.352 52.174 0.00 0.00 0.00 3.20
6174 10263 3.421394 TCTCTCTCTCCCTCTCTCTCT 57.579 52.381 0.00 0.00 0.00 3.10
6175 10264 3.309296 TCTCTCTCTCCCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
6176 10265 3.051803 TCTCTCTCTCCCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
6177 10266 3.309296 TCTCTCTCCCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
6178 10267 3.051803 TCTCTCTCCCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
6179 10268 3.309296 TCTCTCCCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
6180 10269 3.051803 TCTCTCCCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
6181 10270 3.309296 TCTCCCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
6182 10271 3.051803 TCTCCCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
6183 10272 3.309296 TCCCTCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
6184 10273 3.051803 TCCCTCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
6398 10487 3.673746 CTCTCTCTCTTGTGCGAGTAG 57.326 52.381 0.00 0.00 32.83 2.57
6399 10488 3.006940 CTCTCTCTCTTGTGCGAGTAGT 58.993 50.000 0.00 0.00 32.83 2.73
6400 10489 2.744741 TCTCTCTCTTGTGCGAGTAGTG 59.255 50.000 0.00 0.00 32.83 2.74
6401 10490 2.744741 CTCTCTCTTGTGCGAGTAGTGA 59.255 50.000 0.00 0.00 32.83 3.41
6402 10491 2.744741 TCTCTCTTGTGCGAGTAGTGAG 59.255 50.000 0.00 0.00 33.19 3.51
6403 10492 2.486203 CTCTCTTGTGCGAGTAGTGAGT 59.514 50.000 0.00 0.00 32.83 3.41
6404 10493 2.226674 TCTCTTGTGCGAGTAGTGAGTG 59.773 50.000 0.00 0.00 32.83 3.51
6405 10494 1.269723 TCTTGTGCGAGTAGTGAGTGG 59.730 52.381 0.00 0.00 0.00 4.00
6406 10495 1.269723 CTTGTGCGAGTAGTGAGTGGA 59.730 52.381 0.00 0.00 0.00 4.02
6407 10496 1.545841 TGTGCGAGTAGTGAGTGGAT 58.454 50.000 0.00 0.00 0.00 3.41
6408 10497 1.472878 TGTGCGAGTAGTGAGTGGATC 59.527 52.381 0.00 0.00 0.00 3.36
6409 10498 0.733150 TGCGAGTAGTGAGTGGATCG 59.267 55.000 0.00 0.00 0.00 3.69
6410 10499 0.592754 GCGAGTAGTGAGTGGATCGC 60.593 60.000 1.40 1.40 46.97 4.58
6411 10500 0.029567 CGAGTAGTGAGTGGATCGCC 59.970 60.000 0.00 0.00 39.39 5.54
6412 10501 1.103803 GAGTAGTGAGTGGATCGCCA 58.896 55.000 0.00 0.00 43.47 5.69
6482 10571 2.025793 TGCAATCGATTGGGGAGGTTAA 60.026 45.455 33.05 0.85 38.21 2.01
6488 10577 2.375146 GATTGGGGAGGTTAATTGCGT 58.625 47.619 0.00 0.00 0.00 5.24
6518 10607 0.733150 TCGAGAGCGAGGTGTGTATG 59.267 55.000 0.00 0.00 42.51 2.39
6525 10614 1.899437 CGAGGTGTGTATGCAGGGGT 61.899 60.000 0.00 0.00 0.00 4.95
6551 10653 3.800929 ATGCTGTTCATGATATTCGCG 57.199 42.857 0.00 0.00 33.26 5.87
6555 10657 3.317150 CTGTTCATGATATTCGCGGCTA 58.683 45.455 6.13 0.00 0.00 3.93
6556 10658 3.723260 TGTTCATGATATTCGCGGCTAA 58.277 40.909 6.13 0.00 0.00 3.09
6560 10662 5.066968 TCATGATATTCGCGGCTAACATA 57.933 39.130 6.13 0.00 0.00 2.29
6570 10672 0.823769 GGCTAACATAGGGCCTTGGC 60.824 60.000 13.45 7.13 42.31 4.52
6579 10681 2.677875 GGCCTTGGCCCTTGAGTG 60.678 66.667 19.46 0.00 0.00 3.51
6598 10700 1.937223 TGTCGATTGTTTGACGCTGTT 59.063 42.857 0.00 0.00 38.88 3.16
6599 10701 2.033236 TGTCGATTGTTTGACGCTGTTC 60.033 45.455 0.00 0.00 38.88 3.18
6601 10703 1.721489 CGATTGTTTGACGCTGTTCGG 60.721 52.381 0.00 0.00 43.86 4.30
6610 10712 4.430423 GCTGTTCGGCGTTCGCTG 62.430 66.667 18.26 18.26 39.05 5.18
6611 10713 3.036084 CTGTTCGGCGTTCGCTGT 61.036 61.111 22.26 0.00 38.54 4.40
6612 10714 3.281751 CTGTTCGGCGTTCGCTGTG 62.282 63.158 22.26 10.94 38.54 3.66
6613 10715 3.335534 GTTCGGCGTTCGCTGTGT 61.336 61.111 22.26 0.00 38.54 3.72
6614 10716 2.586635 TTCGGCGTTCGCTGTGTT 60.587 55.556 22.26 0.00 38.54 3.32
6615 10717 2.591311 TTCGGCGTTCGCTGTGTTC 61.591 57.895 22.26 2.90 38.54 3.18
6641 10743 6.316140 TGTTCACAATGCAGTCAAGGATATAC 59.684 38.462 0.00 0.00 0.00 1.47
6642 10744 5.988287 TCACAATGCAGTCAAGGATATACA 58.012 37.500 0.00 0.00 0.00 2.29
6643 10745 6.594744 TCACAATGCAGTCAAGGATATACAT 58.405 36.000 0.00 0.00 0.00 2.29
6644 10746 7.734942 TCACAATGCAGTCAAGGATATACATA 58.265 34.615 0.00 0.00 0.00 2.29
6645 10747 7.657354 TCACAATGCAGTCAAGGATATACATAC 59.343 37.037 0.00 0.00 0.00 2.39
6646 10748 6.646653 ACAATGCAGTCAAGGATATACATACG 59.353 38.462 0.00 0.00 0.00 3.06
6647 10749 5.134202 TGCAGTCAAGGATATACATACGG 57.866 43.478 0.00 0.00 0.00 4.02
6648 10750 4.587262 TGCAGTCAAGGATATACATACGGT 59.413 41.667 0.00 0.00 0.00 4.83
6651 10753 6.516860 GCAGTCAAGGATATACATACGGTTCT 60.517 42.308 0.00 0.00 0.00 3.01
6652 10754 7.434492 CAGTCAAGGATATACATACGGTTCTT 58.566 38.462 0.00 0.00 0.00 2.52
6653 10755 8.573885 CAGTCAAGGATATACATACGGTTCTTA 58.426 37.037 0.00 0.00 0.00 2.10
6654 10756 9.139734 AGTCAAGGATATACATACGGTTCTTAA 57.860 33.333 0.00 0.00 0.00 1.85
6655 10757 9.754382 GTCAAGGATATACATACGGTTCTTAAA 57.246 33.333 0.00 0.00 0.00 1.52
6656 10758 9.976511 TCAAGGATATACATACGGTTCTTAAAG 57.023 33.333 0.00 0.00 0.00 1.85
6657 10759 9.760077 CAAGGATATACATACGGTTCTTAAAGT 57.240 33.333 0.00 0.00 0.00 2.66
6659 10761 8.295288 AGGATATACATACGGTTCTTAAAGTCG 58.705 37.037 0.00 0.00 0.00 4.18
6660 10762 8.078596 GGATATACATACGGTTCTTAAAGTCGT 58.921 37.037 0.00 0.00 37.78 4.34
6661 10763 9.111702 GATATACATACGGTTCTTAAAGTCGTC 57.888 37.037 0.00 0.00 35.60 4.20
6663 10765 5.159209 ACATACGGTTCTTAAAGTCGTCTG 58.841 41.667 0.00 0.00 35.23 3.51
6664 10766 3.722728 ACGGTTCTTAAAGTCGTCTGT 57.277 42.857 0.00 0.00 0.00 3.41
6665 10767 3.378339 ACGGTTCTTAAAGTCGTCTGTG 58.622 45.455 0.00 0.00 0.00 3.66
6667 10769 2.155155 GGTTCTTAAAGTCGTCTGTGCG 59.845 50.000 0.00 0.00 0.00 5.34
6668 10770 2.787601 TCTTAAAGTCGTCTGTGCGT 57.212 45.000 0.00 0.00 0.00 5.24
6669 10771 3.902261 TCTTAAAGTCGTCTGTGCGTA 57.098 42.857 0.00 0.00 0.00 4.42
6670 10772 3.818387 TCTTAAAGTCGTCTGTGCGTAG 58.182 45.455 0.00 0.00 0.00 3.51
6696 10798 3.070015 TCATCTTGATCTATGCGCCTCAA 59.930 43.478 4.18 5.66 0.00 3.02
6698 10800 1.524355 CTTGATCTATGCGCCTCAACG 59.476 52.381 4.18 0.00 0.00 4.10
6702 10804 1.032794 TCTATGCGCCTCAACGAGAT 58.967 50.000 4.18 0.00 34.06 2.75
6705 10807 2.309528 ATGCGCCTCAACGAGATTAA 57.690 45.000 4.18 0.00 34.06 1.40
6709 10811 1.867233 CGCCTCAACGAGATTAATGGG 59.133 52.381 0.00 0.00 34.06 4.00
6710 10812 2.741878 CGCCTCAACGAGATTAATGGGT 60.742 50.000 0.00 0.00 34.06 4.51
6714 10816 5.355910 GCCTCAACGAGATTAATGGGTTTTA 59.644 40.000 0.00 0.00 0.00 1.52
6715 10817 6.677187 GCCTCAACGAGATTAATGGGTTTTAC 60.677 42.308 0.00 0.00 0.00 2.01
6716 10818 6.598064 CCTCAACGAGATTAATGGGTTTTACT 59.402 38.462 0.00 0.00 0.00 2.24
6717 10819 7.767198 CCTCAACGAGATTAATGGGTTTTACTA 59.233 37.037 0.00 0.00 0.00 1.82
6719 10821 8.316214 TCAACGAGATTAATGGGTTTTACTAGT 58.684 33.333 0.00 0.00 0.00 2.57
6720 10822 8.943002 CAACGAGATTAATGGGTTTTACTAGTT 58.057 33.333 0.00 0.00 0.00 2.24
6721 10823 8.488651 ACGAGATTAATGGGTTTTACTAGTTG 57.511 34.615 0.00 0.00 0.00 3.16
6722 10824 7.551617 ACGAGATTAATGGGTTTTACTAGTTGG 59.448 37.037 0.00 0.00 0.00 3.77
6723 10825 7.551617 CGAGATTAATGGGTTTTACTAGTTGGT 59.448 37.037 0.00 0.00 0.00 3.67
6740 10842 3.857157 TGGTTAGTCCAAGATATGCCC 57.143 47.619 0.00 0.00 44.12 5.36
6759 10862 1.210931 CGACATGTTGGCAGCAAGG 59.789 57.895 8.44 6.47 0.00 3.61
6820 10925 1.391485 CAGTTGATTCGTCGCAGAAGG 59.609 52.381 0.00 0.00 39.69 3.46
6898 11026 1.624336 ACTTTGGTCTGCATGCATGT 58.376 45.000 26.79 8.63 0.00 3.21
6899 11027 1.965643 ACTTTGGTCTGCATGCATGTT 59.034 42.857 26.79 0.00 0.00 2.71
6900 11028 2.288579 ACTTTGGTCTGCATGCATGTTG 60.289 45.455 26.79 19.03 0.00 3.33
6901 11029 1.330234 TTGGTCTGCATGCATGTTGT 58.670 45.000 26.79 0.00 0.00 3.32
6970 11099 2.151736 CGATCAGCAACAAAAACAAGCG 59.848 45.455 0.00 0.00 0.00 4.68
6995 11129 0.175760 TGCCATCTCTCGCTACAACC 59.824 55.000 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 124 1.745087 CATGCTTAACCAGTCCGCATT 59.255 47.619 0.00 0.00 39.10 3.56
158 172 3.243704 CCAGGAGCAGCTCATAGAGTAAC 60.244 52.174 24.09 3.16 31.08 2.50
196 211 1.312815 GAAGCGCCTCAGCCAAATAT 58.687 50.000 2.29 0.00 38.01 1.28
234 249 2.345991 GCGGGTACAGAAGTGGCA 59.654 61.111 0.00 0.00 0.00 4.92
272 287 6.017687 CACACATCTCAGAATCAGTTTCAACA 60.018 38.462 0.00 0.00 36.75 3.33
292 307 1.557371 TCTTCCACAGGTTCACACACA 59.443 47.619 0.00 0.00 0.00 3.72
293 308 2.325583 TCTTCCACAGGTTCACACAC 57.674 50.000 0.00 0.00 0.00 3.82
332 347 4.551215 AGGATGAACCCTACTGATCTCT 57.449 45.455 0.00 0.00 40.05 3.10
337 352 1.480954 GCGAAGGATGAACCCTACTGA 59.519 52.381 0.00 0.00 40.05 3.41
341 356 0.744874 CTCGCGAAGGATGAACCCTA 59.255 55.000 11.33 0.00 40.05 3.53
345 360 2.537625 CTGAATCTCGCGAAGGATGAAC 59.462 50.000 11.33 6.84 0.00 3.18
447 2318 4.372999 GCCTGGCCTTGGCTTCCT 62.373 66.667 26.09 0.00 46.38 3.36
474 2365 1.134220 CACCACCCACAGTACACAAGT 60.134 52.381 0.00 0.00 0.00 3.16
555 2446 6.449698 CCACAGTAGACAAAATTTGCAAGAT 58.550 36.000 5.52 0.00 0.00 2.40
633 2695 6.261381 TGGTTTTAGTGATGTAAACGCTCTTT 59.739 34.615 0.00 0.00 33.64 2.52
645 2709 4.929211 TGATCTGTCGTGGTTTTAGTGATG 59.071 41.667 0.00 0.00 0.00 3.07
684 2748 5.757808 AGAAACCACAAAATTCGAAATTGGG 59.242 36.000 23.01 20.49 0.00 4.12
711 2775 8.507249 CAAAGTGAAGGAACTAAAGAATGGTAG 58.493 37.037 0.00 0.00 38.49 3.18
748 2982 1.198178 ACGAAAACGGCGTGCAAATAT 59.802 42.857 15.70 0.00 40.94 1.28
749 2983 0.587285 ACGAAAACGGCGTGCAAATA 59.413 45.000 15.70 0.00 40.94 1.40
750 2984 1.357334 ACGAAAACGGCGTGCAAAT 59.643 47.368 15.70 0.00 40.94 2.32
786 3020 4.803426 CTCGACCGACCTGCCTGC 62.803 72.222 0.00 0.00 0.00 4.85
797 3031 1.521450 TTCTGACGGACCACTCGACC 61.521 60.000 0.00 0.00 0.00 4.79
798 3032 0.313043 TTTCTGACGGACCACTCGAC 59.687 55.000 0.00 0.00 0.00 4.20
799 3033 1.201647 GATTTCTGACGGACCACTCGA 59.798 52.381 0.00 0.00 0.00 4.04
918 3166 1.227823 TTGGAAGTGAGTGGTGGCG 60.228 57.895 0.00 0.00 0.00 5.69
919 3167 1.507141 CGTTGGAAGTGAGTGGTGGC 61.507 60.000 0.00 0.00 0.00 5.01
920 3168 0.884704 CCGTTGGAAGTGAGTGGTGG 60.885 60.000 0.00 0.00 0.00 4.61
922 3170 1.227853 GCCGTTGGAAGTGAGTGGT 60.228 57.895 0.00 0.00 0.00 4.16
924 3172 1.845809 GCTGCCGTTGGAAGTGAGTG 61.846 60.000 0.00 0.00 28.99 3.51
926 3174 1.294659 GAGCTGCCGTTGGAAGTGAG 61.295 60.000 0.00 0.00 28.99 3.51
927 3175 1.301716 GAGCTGCCGTTGGAAGTGA 60.302 57.895 0.00 0.00 28.99 3.41
929 3177 2.032681 GGAGCTGCCGTTGGAAGT 59.967 61.111 0.00 0.00 28.99 3.01
930 3178 2.032528 TGGAGCTGCCGTTGGAAG 59.967 61.111 1.53 0.00 40.66 3.46
932 3180 2.731691 GAAGTGGAGCTGCCGTTGGA 62.732 60.000 1.53 0.00 40.66 3.53
934 3182 2.671177 CGAAGTGGAGCTGCCGTTG 61.671 63.158 1.53 0.00 40.66 4.10
1060 3329 2.787567 GGCGGTAGAGCTGGAGGAC 61.788 68.421 0.00 0.00 37.29 3.85
1097 3366 0.315886 ATTTTGGGGGAAACGAACGC 59.684 50.000 0.00 0.00 0.00 4.84
1098 3367 2.804697 AATTTTGGGGGAAACGAACG 57.195 45.000 0.00 0.00 0.00 3.95
1099 3368 3.395639 GGAAATTTTGGGGGAAACGAAC 58.604 45.455 0.00 0.00 0.00 3.95
1102 3371 1.694696 TGGGAAATTTTGGGGGAAACG 59.305 47.619 0.00 0.00 0.00 3.60
1103 3372 2.708861 AGTGGGAAATTTTGGGGGAAAC 59.291 45.455 0.00 0.00 0.00 2.78
1104 3373 3.067645 AGTGGGAAATTTTGGGGGAAA 57.932 42.857 0.00 0.00 0.00 3.13
1105 3374 2.805290 AGTGGGAAATTTTGGGGGAA 57.195 45.000 0.00 0.00 0.00 3.97
1131 3400 2.493973 CGAGCTCTGCCTCAGACC 59.506 66.667 12.85 0.00 35.39 3.85
1190 3461 6.480651 TGCAATTTCGTTTCTGAACTACAGTA 59.519 34.615 0.00 0.00 45.86 2.74
1191 3462 5.295787 TGCAATTTCGTTTCTGAACTACAGT 59.704 36.000 0.00 0.00 45.86 3.55
1192 3463 5.747565 TGCAATTTCGTTTCTGAACTACAG 58.252 37.500 0.00 0.00 46.97 2.74
1193 3464 5.525745 TCTGCAATTTCGTTTCTGAACTACA 59.474 36.000 0.00 0.00 33.51 2.74
1194 3465 5.846473 GTCTGCAATTTCGTTTCTGAACTAC 59.154 40.000 0.00 0.00 33.51 2.73
1197 3468 3.659444 CGTCTGCAATTTCGTTTCTGAAC 59.341 43.478 0.00 0.00 0.00 3.18
1245 3516 3.541632 TCAAATCCCTTAGCCGATTGAC 58.458 45.455 0.00 0.00 0.00 3.18
1382 3654 7.289084 TGTTCCTTAAATCCAAAGCTAAAGGTT 59.711 33.333 0.00 0.00 34.83 3.50
1390 3662 7.391148 TGTCTATGTTCCTTAAATCCAAAGC 57.609 36.000 0.00 0.00 0.00 3.51
1412 3718 8.547967 TTCAGAAAGTTATAGCTCGAAAATGT 57.452 30.769 0.00 0.00 0.00 2.71
1438 3744 5.775195 CAGGAAACTTTTTAGACCTCCCAAT 59.225 40.000 0.00 0.00 40.21 3.16
1441 3747 4.981812 TCAGGAAACTTTTTAGACCTCCC 58.018 43.478 0.00 0.00 40.21 4.30
1466 3772 4.254492 GAGAAGAGAAAAGGGCGTTACAT 58.746 43.478 0.00 0.00 0.00 2.29
1473 3779 4.514816 GCAGATATGAGAAGAGAAAAGGGC 59.485 45.833 0.00 0.00 0.00 5.19
1498 3805 1.133823 TCCACAACCTCTGCACATTGT 60.134 47.619 0.00 0.00 35.69 2.71
1635 3942 2.840651 AGTGAAGGTCCCAGTTCCTATG 59.159 50.000 0.00 0.00 33.27 2.23
1708 4015 8.814235 CAATACGTAGGTCCATTTAAACTACAG 58.186 37.037 0.08 7.76 35.05 2.74
1710 4017 7.493645 AGCAATACGTAGGTCCATTTAAACTAC 59.506 37.037 0.08 0.00 0.00 2.73
1712 4019 6.412214 AGCAATACGTAGGTCCATTTAAACT 58.588 36.000 0.08 0.00 0.00 2.66
1713 4020 6.673154 AGCAATACGTAGGTCCATTTAAAC 57.327 37.500 0.08 0.00 0.00 2.01
1714 4021 6.879993 TGAAGCAATACGTAGGTCCATTTAAA 59.120 34.615 0.08 0.00 0.00 1.52
1715 4022 6.408035 TGAAGCAATACGTAGGTCCATTTAA 58.592 36.000 0.08 0.00 0.00 1.52
1716 4023 5.979993 TGAAGCAATACGTAGGTCCATTTA 58.020 37.500 0.08 0.00 0.00 1.40
1721 4028 2.159085 AGCTGAAGCAATACGTAGGTCC 60.159 50.000 4.90 0.00 45.16 4.46
1759 4066 2.639347 TCCAAGAAGATGGAACTGAGCA 59.361 45.455 0.00 0.00 46.36 4.26
1771 4078 6.798427 AAGCTGACATATACTCCAAGAAGA 57.202 37.500 0.00 0.00 0.00 2.87
1789 4096 5.803020 ATAAAAAGAAGCGAGGTAAGCTG 57.197 39.130 0.00 0.00 45.31 4.24
1796 4103 6.806249 TGCATTACAAATAAAAAGAAGCGAGG 59.194 34.615 0.00 0.00 0.00 4.63
1826 4133 3.536570 TCCTTTCGTGACATCAAACACA 58.463 40.909 0.00 0.00 36.91 3.72
1841 4148 3.381590 GGCCATAATGTGACCTTCCTTTC 59.618 47.826 0.00 0.00 0.00 2.62
1911 4218 4.021916 AGCAGAATTTGGAGCATAGCTTT 58.978 39.130 0.00 0.00 39.88 3.51
1912 4219 3.380637 CAGCAGAATTTGGAGCATAGCTT 59.619 43.478 0.00 0.00 39.88 3.74
1913 4220 2.950309 CAGCAGAATTTGGAGCATAGCT 59.050 45.455 0.00 0.00 43.88 3.32
1920 4227 4.213270 TGTTTACGACAGCAGAATTTGGAG 59.787 41.667 0.00 0.00 33.40 3.86
1959 4266 8.099537 ACATGGCATGGAAATACATAAAACAAA 58.900 29.630 29.49 0.00 33.60 2.83
1961 4268 7.180322 ACATGGCATGGAAATACATAAAACA 57.820 32.000 29.49 0.00 33.60 2.83
2063 4370 0.042131 TACGGGATCCCAGTGACCTT 59.958 55.000 30.42 8.64 35.37 3.50
2072 4379 0.751452 GAGGTTCACTACGGGATCCC 59.249 60.000 22.12 22.12 0.00 3.85
2083 4390 5.689383 TCAAATAGTGCTTTGAGGTTCAC 57.311 39.130 0.00 0.00 39.55 3.18
2157 4464 8.680903 AGCACCAGAAGTTTAAATTATCATCAG 58.319 33.333 0.00 0.00 0.00 2.90
2163 4470 6.016555 ACCCAGCACCAGAAGTTTAAATTAT 58.983 36.000 0.00 0.00 0.00 1.28
2187 4494 0.482446 ATGGTTCTGTTTGCCCCTGA 59.518 50.000 0.00 0.00 0.00 3.86
2250 4557 7.611770 ACAATAAAAGGAAAATGAGGTAAGCC 58.388 34.615 0.00 0.00 0.00 4.35
2314 4621 2.618241 AGAAACAAAAGCTCGTGATGCA 59.382 40.909 3.72 0.00 0.00 3.96
2362 4669 3.104843 TGCAACAAACCAGCAATAACC 57.895 42.857 0.00 0.00 34.97 2.85
2363 4670 5.442402 CAAATGCAACAAACCAGCAATAAC 58.558 37.500 0.00 0.00 42.15 1.89
2547 4855 8.993121 CCATATGTAGTTGGATGAACTATTGAC 58.007 37.037 1.24 0.00 46.58 3.18
2579 4887 2.378038 TGCTTTCTGTTGCTGTTTCCT 58.622 42.857 0.00 0.00 0.00 3.36
2609 4917 9.122954 TCATGACCCATAAGTTATATACCCAAT 57.877 33.333 0.00 0.00 0.00 3.16
2610 4918 8.513139 TCATGACCCATAAGTTATATACCCAA 57.487 34.615 0.00 0.00 0.00 4.12
2611 4919 8.548025 CATCATGACCCATAAGTTATATACCCA 58.452 37.037 0.00 0.00 0.00 4.51
2612 4920 8.768397 TCATCATGACCCATAAGTTATATACCC 58.232 37.037 0.00 0.00 0.00 3.69
2613 4921 9.601217 GTCATCATGACCCATAAGTTATATACC 57.399 37.037 6.50 0.00 41.37 2.73
2614 4922 9.302345 CGTCATCATGACCCATAAGTTATATAC 57.698 37.037 12.37 0.00 44.20 1.47
2615 4923 8.474831 CCGTCATCATGACCCATAAGTTATATA 58.525 37.037 12.37 0.00 44.20 0.86
2616 4924 7.180229 TCCGTCATCATGACCCATAAGTTATAT 59.820 37.037 12.37 0.00 44.20 0.86
2639 6308 6.653183 CACTTTTCACTGATATATTGCTCCG 58.347 40.000 0.00 0.00 0.00 4.63
2688 6357 5.106515 GCTTCACAGTTCCTTGAGAAATACC 60.107 44.000 0.00 0.00 35.85 2.73
2751 6420 8.918658 CAATAGAGTTGCGTTAACAAGTAGTAA 58.081 33.333 6.39 0.00 41.88 2.24
2783 6452 6.149633 CGATGGCCAGCTATATTTTAAAACC 58.850 40.000 20.58 0.00 0.00 3.27
2802 6471 4.997565 AGATTTGTTACAATTGCCGATGG 58.002 39.130 5.05 0.00 0.00 3.51
2804 6473 6.266168 TGAAGATTTGTTACAATTGCCGAT 57.734 33.333 5.05 0.00 0.00 4.18
2893 6563 9.294614 GGCTAGAAAATCTCATCTTAATTGGAT 57.705 33.333 0.00 0.00 0.00 3.41
2896 6568 9.334947 TGAGGCTAGAAAATCTCATCTTAATTG 57.665 33.333 0.00 0.00 32.10 2.32
2910 6582 5.511545 GGTTTCACTCTCTGAGGCTAGAAAA 60.512 44.000 4.59 0.40 33.35 2.29
2921 6593 7.017645 CGATTAAAACATGGTTTCACTCTCTG 58.982 38.462 13.07 0.00 0.00 3.35
2922 6594 6.710744 ACGATTAAAACATGGTTTCACTCTCT 59.289 34.615 13.07 0.00 0.00 3.10
2973 6645 5.102953 ACAATGGAGCTAATGCAGAAGTA 57.897 39.130 0.00 0.00 42.74 2.24
2988 6660 9.699410 ATGTAAGATCCTTGATTTAACAATGGA 57.301 29.630 0.00 0.00 34.41 3.41
3031 6703 1.524008 GGCTAGCCAAAGCACGGTTT 61.524 55.000 29.33 0.00 44.64 3.27
3036 6708 0.035439 TACCAGGCTAGCCAAAGCAC 60.035 55.000 34.70 6.66 44.64 4.40
3037 6709 0.035439 GTACCAGGCTAGCCAAAGCA 60.035 55.000 34.70 13.31 44.64 3.91
3038 6710 0.035439 TGTACCAGGCTAGCCAAAGC 60.035 55.000 34.70 19.84 41.99 3.51
3039 6711 1.679032 GGTGTACCAGGCTAGCCAAAG 60.679 57.143 34.70 23.65 38.92 2.77
3040 6712 0.326927 GGTGTACCAGGCTAGCCAAA 59.673 55.000 34.70 14.38 38.92 3.28
3052 6728 7.336396 AGGTAGTTGAGATAAAATGGTGTACC 58.664 38.462 0.00 0.00 0.00 3.34
3063 6739 6.381420 AGCAGCTTTCTAGGTAGTTGAGATAA 59.619 38.462 11.20 0.00 0.00 1.75
3110 6786 5.521372 GCATGCCACTCCTTATTCAAAAATC 59.479 40.000 6.36 0.00 0.00 2.17
3111 6787 5.188359 AGCATGCCACTCCTTATTCAAAAAT 59.812 36.000 15.66 0.00 0.00 1.82
3117 6793 1.952296 CCAGCATGCCACTCCTTATTC 59.048 52.381 15.66 0.00 31.97 1.75
3121 6797 2.357836 CCCAGCATGCCACTCCTT 59.642 61.111 15.66 0.00 31.97 3.36
3131 6807 0.549950 CCTCATTCTGTCCCCAGCAT 59.450 55.000 0.00 0.00 38.66 3.79
3161 6838 9.051259 AGGATGCTATACATTAACCTGATATGT 57.949 33.333 0.00 0.00 39.84 2.29
3180 6857 5.768662 CCAAATGTCATATCTCAAGGATGCT 59.231 40.000 0.00 0.00 35.98 3.79
3205 6883 1.141858 CCCTTCTATCCCAGCTTGGAC 59.858 57.143 9.06 0.00 40.96 4.02
3256 6934 7.242359 TGATTTTCAACCAAACCTCCCTATTA 58.758 34.615 0.00 0.00 0.00 0.98
3350 7029 7.504403 CAGTAATATCACCATCACCTCTCTTT 58.496 38.462 0.00 0.00 0.00 2.52
3361 7040 7.124573 TCTACAACTGCAGTAATATCACCAT 57.875 36.000 22.01 0.00 0.00 3.55
3362 7041 6.538945 TCTACAACTGCAGTAATATCACCA 57.461 37.500 22.01 0.00 0.00 4.17
3371 7050 6.538945 TCCATGTTATCTACAACTGCAGTA 57.461 37.500 22.01 3.84 40.89 2.74
3449 7128 9.305555 AGTGCATCTTATTTGGCAATTAGATAT 57.694 29.630 14.79 2.90 36.88 1.63
3454 7133 7.545265 GTGAAAGTGCATCTTATTTGGCAATTA 59.455 33.333 0.00 0.00 42.78 1.40
3467 7146 2.880890 GGAACAGTGTGAAAGTGCATCT 59.119 45.455 0.00 0.00 31.79 2.90
3506 7185 2.487762 CAACAATTACCGCCAGTGACAT 59.512 45.455 0.00 0.00 0.00 3.06
3556 7235 9.889128 TTCATATGAACTTTGTCACTATGATGA 57.111 29.630 14.23 0.00 33.28 2.92
3609 7582 1.355381 TCAGCCCATCACCTGTTGAAT 59.645 47.619 0.00 0.00 37.92 2.57
3712 7686 7.447545 TCAGTAGCTCTACAGAGAAGTTGTAAA 59.552 37.037 10.46 0.00 44.74 2.01
3747 7721 5.392767 TCTCTAACAACATCACTCTGACC 57.607 43.478 0.00 0.00 0.00 4.02
3777 7751 9.613428 AAATAATTAGTAGTGCATGCTTGACTA 57.387 29.630 20.33 18.25 0.00 2.59
3869 7843 9.448294 CATCGACTTCTTAACTATACTAACACC 57.552 37.037 0.00 0.00 0.00 4.16
3891 7865 8.196802 TGAAGTTGTCAATATTCTAACCATCG 57.803 34.615 12.21 0.00 31.51 3.84
3975 7953 1.680338 AACAGGTTCAGCAACTGACC 58.320 50.000 0.00 2.95 40.46 4.02
3983 7961 9.855021 AACATTAACATAATAAACAGGTTCAGC 57.145 29.630 0.00 0.00 0.00 4.26
4033 8011 2.290896 TGGCACCTTTCTCCATTACTGG 60.291 50.000 0.00 0.00 44.64 4.00
4034 8012 3.012518 CTGGCACCTTTCTCCATTACTG 58.987 50.000 0.00 0.00 0.00 2.74
4035 8013 2.644798 ACTGGCACCTTTCTCCATTACT 59.355 45.455 0.00 0.00 0.00 2.24
4036 8014 2.749621 CACTGGCACCTTTCTCCATTAC 59.250 50.000 0.00 0.00 0.00 1.89
4038 8016 1.145738 ACACTGGCACCTTTCTCCATT 59.854 47.619 0.00 0.00 0.00 3.16
4039 8017 0.773644 ACACTGGCACCTTTCTCCAT 59.226 50.000 0.00 0.00 0.00 3.41
4040 8018 0.179020 CACACTGGCACCTTTCTCCA 60.179 55.000 0.00 0.00 0.00 3.86
4041 8019 0.179018 ACACACTGGCACCTTTCTCC 60.179 55.000 0.00 0.00 0.00 3.71
4042 8020 2.037251 TCTACACACTGGCACCTTTCTC 59.963 50.000 0.00 0.00 0.00 2.87
4043 8021 2.047061 TCTACACACTGGCACCTTTCT 58.953 47.619 0.00 0.00 0.00 2.52
4045 8023 2.092646 TGTTCTACACACTGGCACCTTT 60.093 45.455 0.00 0.00 0.00 3.11
4055 8047 7.609632 CGTTGACATACATATGTTCTACACAC 58.390 38.462 14.77 3.07 46.20 3.82
4065 8057 6.201615 AGTGATTCAGCGTTGACATACATATG 59.798 38.462 0.00 0.00 39.55 1.78
4087 8079 5.390251 CGACCTTTTCATTCATCACTCAGTG 60.390 44.000 0.00 0.00 34.45 3.66
4097 8089 2.270352 ACCTGCGACCTTTTCATTCA 57.730 45.000 0.00 0.00 0.00 2.57
4098 8090 2.922335 GCAACCTGCGACCTTTTCATTC 60.922 50.000 0.00 0.00 31.71 2.67
4117 8110 2.094906 ACACGCGACTAAGATTGTAGCA 60.095 45.455 15.93 0.00 36.16 3.49
4157 8151 3.602483 TCAAGTTACCGGCCTTAATCAC 58.398 45.455 0.00 0.00 0.00 3.06
4162 8156 3.770933 AGTGTATCAAGTTACCGGCCTTA 59.229 43.478 0.00 0.00 0.00 2.69
4178 8172 4.283467 TGTTCAGTACTTCAGGCAGTGTAT 59.717 41.667 0.00 0.00 0.00 2.29
4186 8180 6.455647 TGTCTGTTATGTTCAGTACTTCAGG 58.544 40.000 0.00 0.00 34.86 3.86
4380 8401 5.640732 CAAGCGGCAATACAAAATAGAAGT 58.359 37.500 1.45 0.00 0.00 3.01
4397 8418 3.668447 ACTATTCATATCCAGCAAGCGG 58.332 45.455 0.00 0.00 0.00 5.52
4432 8453 9.440773 GGAAGATAATAACACATGCAGATGATA 57.559 33.333 6.97 0.26 33.36 2.15
4449 8470 9.294614 GATGCTTTAGAATGGAAGGAAGATAAT 57.705 33.333 0.00 0.00 0.00 1.28
4454 8475 6.771749 AGATGATGCTTTAGAATGGAAGGAAG 59.228 38.462 0.00 0.00 0.00 3.46
4472 8493 9.713713 ATTGAACAGAATAGAGATCAGATGATG 57.286 33.333 0.00 0.00 34.37 3.07
4571 8600 4.389890 AACATGTTTCACATTGCACAGT 57.610 36.364 4.92 0.00 36.53 3.55
4740 8770 4.077822 CACCTCTTTTTGCCTTCATCTCT 58.922 43.478 0.00 0.00 0.00 3.10
4896 8926 3.127030 CCACGAGCCATTTAAGAAAGACC 59.873 47.826 0.00 0.00 0.00 3.85
4897 8927 3.127030 CCCACGAGCCATTTAAGAAAGAC 59.873 47.826 0.00 0.00 0.00 3.01
4918 8951 2.097680 TCGGTCGGAACCAAATTACC 57.902 50.000 0.00 0.00 46.86 2.85
4919 8952 4.690184 ATTTCGGTCGGAACCAAATTAC 57.310 40.909 0.00 0.00 46.86 1.89
4931 8964 4.142708 TGTGAATTCCATGAATTTCGGTCG 60.143 41.667 2.27 0.00 41.56 4.79
4951 8984 1.888215 AGCATGCTCCCGATAATGTG 58.112 50.000 16.30 0.00 0.00 3.21
5007 9048 2.756400 TGCCCTACCAAGGTGCAG 59.244 61.111 1.07 0.00 41.39 4.41
5108 9154 4.720530 GGTTAGTACAAAACCGTCACTG 57.279 45.455 12.72 0.00 37.26 3.66
5133 9179 5.391950 GCAATGGTTGTTACACTATGACCTG 60.392 44.000 5.00 0.00 0.00 4.00
5172 9218 0.886490 CCAGCTTGCTGAAACTCGGT 60.886 55.000 22.50 0.00 0.00 4.69
5204 9250 2.234896 TGCCATATATTGCCCCATGG 57.765 50.000 4.14 4.14 40.80 3.66
5220 9266 6.973229 ATTTCTTGTGCTATTTCATTTGCC 57.027 33.333 0.00 0.00 0.00 4.52
5255 9304 5.683859 CACAAAGTTACTGCTCATTCTCAC 58.316 41.667 0.00 0.00 0.00 3.51
5334 9384 0.033504 GAACAAGTGCGGGAGACAGA 59.966 55.000 0.00 0.00 0.00 3.41
5347 9397 3.914312 TCTAAGCAAGGACGAGAACAAG 58.086 45.455 0.00 0.00 0.00 3.16
5350 9400 3.440872 TCTCTCTAAGCAAGGACGAGAAC 59.559 47.826 0.00 0.00 31.10 3.01
5366 9416 1.643811 AGTAGGTCCAAGGCTCTCTCT 59.356 52.381 0.00 0.00 0.00 3.10
5378 9428 4.589374 AGATATGGTTGCTACAGTAGGTCC 59.411 45.833 9.74 0.00 0.00 4.46
5392 9442 4.255510 AGCACCCATCAAAGATATGGTT 57.744 40.909 0.00 0.00 42.06 3.67
5449 9499 0.108186 CAGAGAAGCACCGGCATACA 60.108 55.000 0.00 0.00 44.61 2.29
5470 9520 3.618594 CACAAGTCATAGGTTCCACATCG 59.381 47.826 0.00 0.00 0.00 3.84
5503 9553 1.764054 CCTAGCACTAGCAGGCCCT 60.764 63.158 0.00 0.00 45.49 5.19
5540 9590 6.804770 AGGTTCTACATCTGCGTATACTAG 57.195 41.667 0.56 0.00 0.00 2.57
5548 9598 2.287909 GCTCCTAGGTTCTACATCTGCG 60.288 54.545 9.08 0.00 0.00 5.18
5550 9600 3.571590 AGGCTCCTAGGTTCTACATCTG 58.428 50.000 9.08 0.00 0.00 2.90
5565 9615 2.755103 CCCATAAGAAACACAAGGCTCC 59.245 50.000 0.00 0.00 0.00 4.70
5570 9621 3.578688 GCAAGCCCATAAGAAACACAAG 58.421 45.455 0.00 0.00 0.00 3.16
5575 9626 1.478105 CCTGGCAAGCCCATAAGAAAC 59.522 52.381 8.89 0.00 44.33 2.78
5578 9629 1.076777 GCCTGGCAAGCCCATAAGA 60.077 57.895 15.17 0.00 44.33 2.10
5580 9631 2.043046 GGCCTGGCAAGCCCATAA 60.043 61.111 22.05 0.00 45.16 1.90
5592 9643 3.221771 TGATTCCGAATTTATGGGCCTG 58.778 45.455 4.53 0.00 0.00 4.85
5608 9659 6.552629 TCGACCGATAATGCTACTATGATTC 58.447 40.000 0.00 0.00 0.00 2.52
5609 9660 6.510879 TCGACCGATAATGCTACTATGATT 57.489 37.500 0.00 0.00 0.00 2.57
5612 9663 7.582435 AAATTCGACCGATAATGCTACTATG 57.418 36.000 0.00 0.00 0.00 2.23
5614 9665 8.517056 TGATAAATTCGACCGATAATGCTACTA 58.483 33.333 0.00 0.00 0.00 1.82
5615 9666 7.328737 GTGATAAATTCGACCGATAATGCTACT 59.671 37.037 0.00 0.00 0.00 2.57
5616 9667 7.328737 AGTGATAAATTCGACCGATAATGCTAC 59.671 37.037 0.00 0.00 0.00 3.58
5619 9670 6.299604 CAGTGATAAATTCGACCGATAATGC 58.700 40.000 0.00 0.00 0.00 3.56
5623 9679 4.038763 AGCCAGTGATAAATTCGACCGATA 59.961 41.667 0.00 0.00 0.00 2.92
5639 9695 1.068055 GTGGAAATGCTTCAGCCAGTG 60.068 52.381 0.00 0.00 41.18 3.66
5693 9750 3.492337 GGGGAAACAACCACACAGATTA 58.508 45.455 0.00 0.00 32.85 1.75
5695 9752 1.480498 GGGGGAAACAACCACACAGAT 60.480 52.381 0.00 0.00 34.56 2.90
5696 9753 0.106419 GGGGGAAACAACCACACAGA 60.106 55.000 0.00 0.00 34.56 3.41
5697 9754 1.452145 CGGGGGAAACAACCACACAG 61.452 60.000 0.00 0.00 34.56 3.66
5698 9755 1.454111 CGGGGGAAACAACCACACA 60.454 57.895 0.00 0.00 34.56 3.72
5699 9756 2.852180 GCGGGGGAAACAACCACAC 61.852 63.158 0.00 0.00 34.56 3.82
5700 9757 2.519780 GCGGGGGAAACAACCACA 60.520 61.111 0.00 0.00 34.56 4.17
5701 9758 2.128507 TTGCGGGGGAAACAACCAC 61.129 57.895 0.00 0.00 0.00 4.16
5702 9759 2.128507 GTTGCGGGGGAAACAACCA 61.129 57.895 0.00 0.00 38.15 3.67
5748 9806 5.922739 TGTGATGCAGTAGTACAAAACTG 57.077 39.130 15.07 15.07 44.79 3.16
5749 9807 7.362662 CAAATGTGATGCAGTAGTACAAAACT 58.637 34.615 2.52 0.00 42.62 2.66
5752 9810 6.000840 TCCAAATGTGATGCAGTAGTACAAA 58.999 36.000 2.52 0.00 0.00 2.83
5753 9811 5.411361 GTCCAAATGTGATGCAGTAGTACAA 59.589 40.000 2.52 0.00 0.00 2.41
5755 9813 4.935205 TGTCCAAATGTGATGCAGTAGTAC 59.065 41.667 0.00 0.00 0.00 2.73
5756 9814 5.159273 TGTCCAAATGTGATGCAGTAGTA 57.841 39.130 0.00 0.00 0.00 1.82
5757 9815 4.019792 TGTCCAAATGTGATGCAGTAGT 57.980 40.909 0.00 0.00 0.00 2.73
5758 9816 5.571784 AATGTCCAAATGTGATGCAGTAG 57.428 39.130 0.00 0.00 0.00 2.57
5760 9818 4.561938 CCAAATGTCCAAATGTGATGCAGT 60.562 41.667 0.00 0.00 0.00 4.40
5761 9819 3.930229 CCAAATGTCCAAATGTGATGCAG 59.070 43.478 0.00 0.00 0.00 4.41
5762 9820 3.324268 ACCAAATGTCCAAATGTGATGCA 59.676 39.130 0.00 0.00 0.00 3.96
5763 9821 3.929094 ACCAAATGTCCAAATGTGATGC 58.071 40.909 0.00 0.00 0.00 3.91
5764 9822 6.091169 GCTTAACCAAATGTCCAAATGTGATG 59.909 38.462 0.00 0.00 0.00 3.07
5765 9823 6.165577 GCTTAACCAAATGTCCAAATGTGAT 58.834 36.000 0.00 0.00 0.00 3.06
5766 9824 5.069648 TGCTTAACCAAATGTCCAAATGTGA 59.930 36.000 0.00 0.00 0.00 3.58
5767 9825 5.295950 TGCTTAACCAAATGTCCAAATGTG 58.704 37.500 0.00 0.00 0.00 3.21
5768 9826 5.543507 TGCTTAACCAAATGTCCAAATGT 57.456 34.783 0.00 0.00 0.00 2.71
5769 9827 7.201548 GCTAATGCTTAACCAAATGTCCAAATG 60.202 37.037 0.00 0.00 36.03 2.32
5770 9828 6.818142 GCTAATGCTTAACCAAATGTCCAAAT 59.182 34.615 0.00 0.00 36.03 2.32
5771 9829 6.162777 GCTAATGCTTAACCAAATGTCCAAA 58.837 36.000 0.00 0.00 36.03 3.28
5772 9830 5.337169 GGCTAATGCTTAACCAAATGTCCAA 60.337 40.000 0.00 0.00 39.59 3.53
5773 9831 4.159506 GGCTAATGCTTAACCAAATGTCCA 59.840 41.667 0.00 0.00 39.59 4.02
5774 9832 4.402474 AGGCTAATGCTTAACCAAATGTCC 59.598 41.667 0.00 0.00 39.59 4.02
5775 9833 5.125417 TCAGGCTAATGCTTAACCAAATGTC 59.875 40.000 0.00 0.00 39.59 3.06
5790 9848 6.770286 TCCCTAGAAAATCATCAGGCTAAT 57.230 37.500 0.00 0.00 0.00 1.73
5794 9857 6.067350 AGATTTCCCTAGAAAATCATCAGGC 58.933 40.000 22.18 5.07 44.91 4.85
5820 9883 2.490509 GCCAGGCCAGTAATAAAACGTT 59.509 45.455 5.01 0.00 0.00 3.99
6099 10185 2.422832 GCTTACTGTGCTCTACCGTAGT 59.577 50.000 5.46 0.00 31.83 2.73
6154 10243 3.051803 AGAGAGAGAGAGGGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
6155 10244 3.312890 AGAGAGAGAGAGGGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
6156 10245 3.051803 AGAGAGAGAGAGAGGGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
6157 10246 3.312890 AGAGAGAGAGAGAGGGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
6158 10247 3.051803 AGAGAGAGAGAGAGAGGGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
6159 10248 3.312890 AGAGAGAGAGAGAGAGGGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
6160 10249 3.051803 AGAGAGAGAGAGAGAGAGGGAGA 60.052 52.174 0.00 0.00 0.00 3.71
6161 10250 3.312890 AGAGAGAGAGAGAGAGAGGGAG 58.687 54.545 0.00 0.00 0.00 4.30
6162 10251 3.051803 AGAGAGAGAGAGAGAGAGAGGGA 60.052 52.174 0.00 0.00 0.00 4.20
6163 10252 3.312890 AGAGAGAGAGAGAGAGAGAGGG 58.687 54.545 0.00 0.00 0.00 4.30
6378 10467 3.006940 ACTACTCGCACAAGAGAGAGAG 58.993 50.000 5.41 0.00 43.47 3.20
6379 10468 2.744741 CACTACTCGCACAAGAGAGAGA 59.255 50.000 5.41 0.00 43.47 3.10
6380 10469 2.744741 TCACTACTCGCACAAGAGAGAG 59.255 50.000 3.30 0.00 43.47 3.20
6381 10470 2.744741 CTCACTACTCGCACAAGAGAGA 59.255 50.000 3.30 0.00 43.47 3.10
6382 10471 2.486203 ACTCACTACTCGCACAAGAGAG 59.514 50.000 0.62 0.00 45.83 3.20
6383 10472 2.226674 CACTCACTACTCGCACAAGAGA 59.773 50.000 0.62 0.00 40.57 3.10
6384 10473 2.590073 CACTCACTACTCGCACAAGAG 58.410 52.381 0.00 0.00 43.56 2.85
6385 10474 1.269723 CCACTCACTACTCGCACAAGA 59.730 52.381 0.00 0.00 0.00 3.02
6386 10475 1.269723 TCCACTCACTACTCGCACAAG 59.730 52.381 0.00 0.00 0.00 3.16
6387 10476 1.324383 TCCACTCACTACTCGCACAA 58.676 50.000 0.00 0.00 0.00 3.33
6388 10477 1.472878 GATCCACTCACTACTCGCACA 59.527 52.381 0.00 0.00 0.00 4.57
6389 10478 1.532090 CGATCCACTCACTACTCGCAC 60.532 57.143 0.00 0.00 0.00 5.34
6390 10479 0.733150 CGATCCACTCACTACTCGCA 59.267 55.000 0.00 0.00 0.00 5.10
6391 10480 0.592754 GCGATCCACTCACTACTCGC 60.593 60.000 0.00 0.00 43.61 5.03
6392 10481 0.029567 GGCGATCCACTCACTACTCG 59.970 60.000 0.00 0.00 0.00 4.18
6393 10482 1.103803 TGGCGATCCACTCACTACTC 58.896 55.000 0.00 0.00 37.47 2.59
6394 10483 1.557099 TTGGCGATCCACTCACTACT 58.443 50.000 0.00 0.00 43.33 2.57
6395 10484 2.101582 AGATTGGCGATCCACTCACTAC 59.898 50.000 11.18 0.00 42.61 2.73
6396 10485 2.362397 GAGATTGGCGATCCACTCACTA 59.638 50.000 11.18 0.00 42.61 2.74
6397 10486 1.137872 GAGATTGGCGATCCACTCACT 59.862 52.381 11.18 0.00 42.61 3.41
6398 10487 1.137872 AGAGATTGGCGATCCACTCAC 59.862 52.381 11.18 0.00 42.61 3.51
6399 10488 1.137675 CAGAGATTGGCGATCCACTCA 59.862 52.381 11.18 0.00 42.61 3.41
6400 10489 1.137872 ACAGAGATTGGCGATCCACTC 59.862 52.381 11.18 2.97 43.33 3.51
6401 10490 1.134580 CACAGAGATTGGCGATCCACT 60.135 52.381 11.18 8.40 43.33 4.00
6402 10491 1.293924 CACAGAGATTGGCGATCCAC 58.706 55.000 11.18 6.30 43.33 4.02
6403 10492 0.178767 CCACAGAGATTGGCGATCCA 59.821 55.000 11.18 0.00 41.55 3.41
6404 10493 0.533755 CCCACAGAGATTGGCGATCC 60.534 60.000 11.18 3.40 35.21 3.36
6405 10494 0.179000 ACCCACAGAGATTGGCGATC 59.821 55.000 6.62 6.62 32.13 3.69
6406 10495 1.496060 TACCCACAGAGATTGGCGAT 58.504 50.000 0.00 0.00 32.13 4.58
6407 10496 1.412710 GATACCCACAGAGATTGGCGA 59.587 52.381 0.00 0.00 32.13 5.54
6408 10497 1.541233 GGATACCCACAGAGATTGGCG 60.541 57.143 0.00 0.00 32.13 5.69
6409 10498 1.541233 CGGATACCCACAGAGATTGGC 60.541 57.143 0.00 0.00 32.13 4.52
6410 10499 1.070758 CCGGATACCCACAGAGATTGG 59.929 57.143 0.00 0.00 0.00 3.16
6411 10500 1.762957 ACCGGATACCCACAGAGATTG 59.237 52.381 9.46 0.00 0.00 2.67
6412 10501 1.762957 CACCGGATACCCACAGAGATT 59.237 52.381 9.46 0.00 0.00 2.40
6413 10502 1.414158 CACCGGATACCCACAGAGAT 58.586 55.000 9.46 0.00 0.00 2.75
6464 10553 3.636764 GCAATTAACCTCCCCAATCGATT 59.363 43.478 4.39 4.39 0.00 3.34
6482 10571 5.295431 TCTCGAAATGATTTGAACGCAAT 57.705 34.783 0.00 0.00 33.25 3.56
6488 10577 3.618594 CCTCGCTCTCGAAATGATTTGAA 59.381 43.478 0.00 0.00 44.98 2.69
6534 10636 2.138320 AGCCGCGAATATCATGAACAG 58.862 47.619 8.23 0.00 0.00 3.16
6570 10672 3.058914 GTCAAACAATCGACACTCAAGGG 60.059 47.826 0.00 0.00 32.24 3.95
6576 10678 1.526887 CAGCGTCAAACAATCGACACT 59.473 47.619 0.00 0.00 32.24 3.55
6579 10681 2.560896 GAACAGCGTCAAACAATCGAC 58.439 47.619 0.00 0.00 0.00 4.20
6595 10697 3.334751 CACAGCGAACGCCGAACA 61.335 61.111 15.44 0.00 43.17 3.18
6598 10700 3.033764 GAACACAGCGAACGCCGA 61.034 61.111 15.44 0.00 43.17 5.54
6599 10701 3.036084 AGAACACAGCGAACGCCG 61.036 61.111 15.44 8.22 43.17 6.46
6601 10703 0.383124 GAACAGAACACAGCGAACGC 60.383 55.000 11.31 11.31 42.33 4.84
6602 10704 0.927537 TGAACAGAACACAGCGAACG 59.072 50.000 0.00 0.00 0.00 3.95
6603 10705 1.663643 TGTGAACAGAACACAGCGAAC 59.336 47.619 0.00 0.00 42.20 3.95
6604 10706 2.017138 TGTGAACAGAACACAGCGAA 57.983 45.000 0.00 0.00 42.20 4.70
6605 10707 2.017138 TTGTGAACAGAACACAGCGA 57.983 45.000 0.00 0.00 46.44 4.93
6606 10708 2.642995 CATTGTGAACAGAACACAGCG 58.357 47.619 0.00 0.00 46.44 5.18
6608 10710 3.065786 ACTGCATTGTGAACAGAACACAG 59.934 43.478 0.00 11.41 46.44 3.66
6609 10711 3.016031 ACTGCATTGTGAACAGAACACA 58.984 40.909 0.00 0.00 44.76 3.72
6610 10712 3.065233 TGACTGCATTGTGAACAGAACAC 59.935 43.478 0.00 0.00 38.55 3.32
6611 10713 3.277715 TGACTGCATTGTGAACAGAACA 58.722 40.909 0.00 0.00 35.38 3.18
6612 10714 3.969117 TGACTGCATTGTGAACAGAAC 57.031 42.857 0.00 0.00 35.38 3.01
6613 10715 3.316029 CCTTGACTGCATTGTGAACAGAA 59.684 43.478 0.00 0.00 35.38 3.02
6614 10716 2.880268 CCTTGACTGCATTGTGAACAGA 59.120 45.455 0.00 0.00 35.38 3.41
6615 10717 2.880268 TCCTTGACTGCATTGTGAACAG 59.120 45.455 0.00 0.00 37.45 3.16
6641 10743 5.060569 CACAGACGACTTTAAGAACCGTATG 59.939 44.000 21.00 21.00 44.66 2.39
6642 10744 5.159209 CACAGACGACTTTAAGAACCGTAT 58.841 41.667 0.00 0.24 33.32 3.06
6643 10745 4.539870 CACAGACGACTTTAAGAACCGTA 58.460 43.478 0.00 0.00 33.32 4.02
6644 10746 3.378339 CACAGACGACTTTAAGAACCGT 58.622 45.455 0.00 5.33 36.08 4.83
6645 10747 2.155155 GCACAGACGACTTTAAGAACCG 59.845 50.000 0.00 2.09 0.00 4.44
6646 10748 2.155155 CGCACAGACGACTTTAAGAACC 59.845 50.000 0.00 0.00 34.06 3.62
6647 10749 2.793232 ACGCACAGACGACTTTAAGAAC 59.207 45.455 0.00 0.00 36.70 3.01
6648 10750 3.088194 ACGCACAGACGACTTTAAGAA 57.912 42.857 0.00 0.00 36.70 2.52
6651 10753 2.287728 TGCTACGCACAGACGACTTTAA 60.288 45.455 0.00 0.00 36.70 1.52
6652 10754 1.267533 TGCTACGCACAGACGACTTTA 59.732 47.619 0.00 0.00 36.70 1.85
6653 10755 0.031585 TGCTACGCACAGACGACTTT 59.968 50.000 0.00 0.00 36.70 2.66
6654 10756 0.243907 ATGCTACGCACAGACGACTT 59.756 50.000 0.00 0.00 43.04 3.01
6655 10757 0.243907 AATGCTACGCACAGACGACT 59.756 50.000 0.00 0.00 43.04 4.18
6656 10758 0.640768 GAATGCTACGCACAGACGAC 59.359 55.000 0.00 0.00 43.04 4.34
6657 10759 0.242555 TGAATGCTACGCACAGACGA 59.757 50.000 0.00 0.00 43.04 4.20
6659 10761 2.544685 AGATGAATGCTACGCACAGAC 58.455 47.619 0.00 0.00 43.04 3.51
6660 10762 2.931969 CAAGATGAATGCTACGCACAGA 59.068 45.455 0.00 0.00 43.04 3.41
6661 10763 2.931969 TCAAGATGAATGCTACGCACAG 59.068 45.455 0.00 0.00 43.04 3.66
6663 10765 3.806521 AGATCAAGATGAATGCTACGCAC 59.193 43.478 0.00 0.00 43.04 5.34
6664 10766 4.063998 AGATCAAGATGAATGCTACGCA 57.936 40.909 0.00 0.00 44.86 5.24
6665 10767 5.445673 GCATAGATCAAGATGAATGCTACGC 60.446 44.000 14.38 1.46 34.87 4.42
6667 10769 5.445673 GCGCATAGATCAAGATGAATGCTAC 60.446 44.000 0.30 10.07 35.24 3.58
6668 10770 4.628766 GCGCATAGATCAAGATGAATGCTA 59.371 41.667 0.30 3.49 35.24 3.49
6669 10771 3.436015 GCGCATAGATCAAGATGAATGCT 59.564 43.478 0.30 1.79 35.24 3.79
6670 10772 3.425892 GGCGCATAGATCAAGATGAATGC 60.426 47.826 10.83 12.71 34.61 3.56
6671 10773 4.001652 AGGCGCATAGATCAAGATGAATG 58.998 43.478 10.83 0.00 0.00 2.67
6672 10774 4.252073 GAGGCGCATAGATCAAGATGAAT 58.748 43.478 10.83 0.00 0.00 2.57
6673 10775 3.070015 TGAGGCGCATAGATCAAGATGAA 59.930 43.478 10.83 0.00 0.00 2.57
6674 10776 2.629617 TGAGGCGCATAGATCAAGATGA 59.370 45.455 10.83 0.00 0.00 2.92
6675 10777 3.036075 TGAGGCGCATAGATCAAGATG 57.964 47.619 10.83 0.00 0.00 2.90
6676 10778 3.397482 GTTGAGGCGCATAGATCAAGAT 58.603 45.455 10.83 0.00 32.64 2.40
6677 10779 2.799562 CGTTGAGGCGCATAGATCAAGA 60.800 50.000 10.83 0.00 32.64 3.02
6678 10780 1.524355 CGTTGAGGCGCATAGATCAAG 59.476 52.381 10.83 2.52 32.64 3.02
6685 10787 3.446310 TTAATCTCGTTGAGGCGCATA 57.554 42.857 10.83 0.00 0.00 3.14
6696 10798 7.551617 CCAACTAGTAAAACCCATTAATCTCGT 59.448 37.037 0.00 0.00 0.00 4.18
6698 10800 8.803397 ACCAACTAGTAAAACCCATTAATCTC 57.197 34.615 0.00 0.00 0.00 2.75
6702 10804 9.506018 GACTAACCAACTAGTAAAACCCATTAA 57.494 33.333 0.00 0.00 32.14 1.40
6705 10807 6.044637 TGGACTAACCAACTAGTAAAACCCAT 59.955 38.462 0.00 0.00 46.75 4.00
6721 10823 2.550208 CGGGGCATATCTTGGACTAACC 60.550 54.545 0.00 0.00 39.54 2.85
6722 10824 2.367567 TCGGGGCATATCTTGGACTAAC 59.632 50.000 0.00 0.00 0.00 2.34
6723 10825 2.367567 GTCGGGGCATATCTTGGACTAA 59.632 50.000 0.00 0.00 0.00 2.24
6740 10842 1.210931 CTTGCTGCCAACATGTCGG 59.789 57.895 0.00 0.00 0.00 4.79
6759 10862 1.586154 CCCATCGTCCAAGTTGCACC 61.586 60.000 0.00 0.00 0.00 5.01
6790 10893 4.613850 CGACGAATCAACTGAGAGACTCAA 60.614 45.833 5.02 0.00 40.18 3.02
6831 10937 5.683302 GCAAAAACTAGAGAAACAGTTCAGC 59.317 40.000 0.00 0.00 33.92 4.26
6836 10942 5.006746 CAGACGCAAAAACTAGAGAAACAGT 59.993 40.000 0.00 0.00 0.00 3.55
6898 11026 2.668632 CCGAGCAGGCCCTAACAA 59.331 61.111 0.00 0.00 0.00 2.83
6899 11027 3.399181 CCCGAGCAGGCCCTAACA 61.399 66.667 0.00 0.00 39.21 2.41
6970 11099 0.390860 AGCGAGAGATGGCATGGTAC 59.609 55.000 3.81 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.