Multiple sequence alignment - TraesCS4D01G252100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G252100 chr4D 100.000 6241 0 0 1 6241 420938962 420945202 0.000000e+00 11526.0
1 TraesCS4D01G252100 chr4D 84.393 1384 188 18 3874 5243 10250851 10252220 0.000000e+00 1334.0
2 TraesCS4D01G252100 chr4D 80.662 1329 223 25 3890 5204 47535711 47534403 0.000000e+00 1000.0
3 TraesCS4D01G252100 chr4D 84.022 557 87 2 3227 3782 10250300 10250855 9.210000e-148 534.0
4 TraesCS4D01G252100 chr4D 84.516 465 69 2 3226 3687 47536520 47536056 2.050000e-124 457.0
5 TraesCS4D01G252100 chr4D 93.013 229 16 0 6013 6241 486796790 486796562 1.000000e-87 335.0
6 TraesCS4D01G252100 chr4D 88.672 256 27 2 1162 1416 10249590 10249844 1.690000e-80 311.0
7 TraesCS4D01G252100 chr4B 95.184 2886 95 18 2744 5612 518097017 518099875 0.000000e+00 4519.0
8 TraesCS4D01G252100 chr4B 93.829 1831 64 15 3 1790 518094248 518096072 0.000000e+00 2710.0
9 TraesCS4D01G252100 chr4B 84.126 1367 191 20 3881 5234 19736659 19738012 0.000000e+00 1299.0
10 TraesCS4D01G252100 chr4B 79.819 1328 236 23 3890 5204 69378936 69380244 0.000000e+00 939.0
11 TraesCS4D01G252100 chr4B 92.640 394 18 5 2126 2518 518096389 518096772 1.970000e-154 556.0
12 TraesCS4D01G252100 chr4B 84.014 563 89 1 3220 3782 19736095 19736656 1.980000e-149 540.0
13 TraesCS4D01G252100 chr4B 84.301 465 70 2 3226 3687 69378047 69378511 9.540000e-123 451.0
14 TraesCS4D01G252100 chr4B 89.899 297 22 4 5597 5886 518100591 518100886 5.910000e-100 375.0
15 TraesCS4D01G252100 chr4B 86.170 282 37 2 1136 1416 19735616 19735896 2.830000e-78 303.0
16 TraesCS4D01G252100 chr4A 93.768 2744 103 28 2719 5424 43234243 43231530 0.000000e+00 4058.0
17 TraesCS4D01G252100 chr4A 89.864 2131 91 47 1 2077 43236855 43234796 0.000000e+00 2623.0
18 TraesCS4D01G252100 chr4A 83.726 1358 201 15 3887 5234 593356264 593354917 0.000000e+00 1266.0
19 TraesCS4D01G252100 chr4A 79.624 1330 235 25 3890 5204 550482508 550481200 0.000000e+00 922.0
20 TraesCS4D01G252100 chr4A 88.989 445 26 13 2125 2565 43234793 43234368 4.280000e-146 529.0
21 TraesCS4D01G252100 chr4A 83.662 557 91 0 3226 3782 593356829 593356273 5.540000e-145 525.0
22 TraesCS4D01G252100 chr4A 86.780 469 38 9 5425 5887 42836827 42837277 9.340000e-138 501.0
23 TraesCS4D01G252100 chr4A 84.516 465 69 2 3226 3687 550483260 550482796 2.050000e-124 457.0
24 TraesCS4D01G252100 chr4A 87.973 291 32 3 1136 1425 593357385 593357097 2.150000e-89 340.0
25 TraesCS4D01G252100 chr4A 91.892 111 6 3 5898 6006 527023640 527023531 1.080000e-32 152.0
26 TraesCS4D01G252100 chr4A 90.909 55 5 0 5887 5941 486120309 486120363 2.410000e-09 75.0
27 TraesCS4D01G252100 chr7D 96.170 235 9 0 6007 6241 586424066 586424300 9.810000e-103 385.0
28 TraesCS4D01G252100 chr7D 94.298 228 13 0 6013 6240 446985179 446985406 3.580000e-92 350.0
29 TraesCS4D01G252100 chr3D 96.070 229 9 0 6013 6241 443432939 443432711 2.120000e-99 374.0
30 TraesCS4D01G252100 chr3D 95.217 230 11 0 6012 6241 320821761 320821990 1.280000e-96 364.0
31 TraesCS4D01G252100 chr2B 95.217 230 11 0 6012 6241 682944044 682944273 1.280000e-96 364.0
32 TraesCS4D01G252100 chr2B 92.920 113 5 2 5896 6008 482191024 482190915 1.800000e-35 161.0
33 TraesCS4D01G252100 chr7A 94.017 234 13 1 6008 6241 535397729 535397497 2.770000e-93 353.0
34 TraesCS4D01G252100 chr1D 93.450 229 14 1 6013 6241 364605568 364605795 7.750000e-89 339.0
35 TraesCS4D01G252100 chr1D 92.576 229 17 0 6013 6241 376277968 376277740 4.660000e-86 329.0
36 TraesCS4D01G252100 chr1D 95.652 115 4 1 5894 6008 460197574 460197461 3.840000e-42 183.0
37 TraesCS4D01G252100 chr1D 94.382 89 4 1 5920 6008 142030013 142030100 1.090000e-27 135.0
38 TraesCS4D01G252100 chr6D 75.606 578 123 16 4646 5217 389370151 389370716 2.870000e-68 270.0
39 TraesCS4D01G252100 chr6D 71.959 781 200 17 3872 4644 389369297 389370066 1.760000e-50 211.0
40 TraesCS4D01G252100 chr6D 95.614 114 4 1 5895 6008 297521394 297521282 1.380000e-41 182.0
41 TraesCS4D01G252100 chr6B 71.575 781 198 19 3875 4644 582400057 582400824 2.300000e-44 191.0
42 TraesCS4D01G252100 chr3B 82.653 196 22 7 4110 4296 104157461 104157653 5.010000e-36 163.0
43 TraesCS4D01G252100 chr3B 93.220 59 3 1 5884 5942 13263610 13263553 1.110000e-12 86.1
44 TraesCS4D01G252100 chr1B 92.308 117 4 4 5894 6008 563382622 563382509 1.800000e-35 161.0
45 TraesCS4D01G252100 chr2D 90.244 123 10 2 5896 6017 468977080 468976959 6.480000e-35 159.0
46 TraesCS4D01G252100 chr2A 82.941 170 23 4 3219 3386 745014868 745015033 1.400000e-31 148.0
47 TraesCS4D01G252100 chr5B 86.842 114 11 4 5894 6005 497454218 497454107 2.360000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G252100 chr4D 420938962 420945202 6240 False 11526.000000 11526 100.000000 1 6241 1 chr4D.!!$F1 6240
1 TraesCS4D01G252100 chr4D 47534403 47536520 2117 True 728.500000 1000 82.589000 3226 5204 2 chr4D.!!$R2 1978
2 TraesCS4D01G252100 chr4D 10249590 10252220 2630 False 726.333333 1334 85.695667 1162 5243 3 chr4D.!!$F2 4081
3 TraesCS4D01G252100 chr4B 518094248 518100886 6638 False 2040.000000 4519 92.888000 3 5886 4 chr4B.!!$F3 5883
4 TraesCS4D01G252100 chr4B 19735616 19738012 2396 False 714.000000 1299 84.770000 1136 5234 3 chr4B.!!$F1 4098
5 TraesCS4D01G252100 chr4B 69378047 69380244 2197 False 695.000000 939 82.060000 3226 5204 2 chr4B.!!$F2 1978
6 TraesCS4D01G252100 chr4A 43231530 43236855 5325 True 2403.333333 4058 90.873667 1 5424 3 chr4A.!!$R2 5423
7 TraesCS4D01G252100 chr4A 593354917 593357385 2468 True 710.333333 1266 85.120333 1136 5234 3 chr4A.!!$R4 4098
8 TraesCS4D01G252100 chr4A 550481200 550483260 2060 True 689.500000 922 82.070000 3226 5204 2 chr4A.!!$R3 1978
9 TraesCS4D01G252100 chr6D 389369297 389370716 1419 False 240.500000 270 73.782500 3872 5217 2 chr6D.!!$F1 1345

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
219 220 0.036732 TGTGACCTCATTCCACCTGC 59.963 55.0 0.00 0.00 0.00 4.85 F
732 755 0.456824 GTGAGAGCTGCACGATCGAA 60.457 55.0 24.34 5.92 32.02 3.71 F
2356 2612 0.179108 GGCCTACACGTCCAGCTTAG 60.179 60.0 0.00 0.00 0.00 2.18 F
3617 3978 0.323629 CCTACACCACCATCAACGGT 59.676 55.0 0.00 0.00 41.07 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1643 1703 0.392193 CACCAGGTCACCATCAGAGC 60.392 60.0 0.00 0.0 0.00 4.09 R
2435 2692 0.537188 CCAGGGACGCTGTACAAGAT 59.463 55.0 17.35 0.0 0.00 2.40 R
3788 4294 0.031857 TCATGGCGGTTTTGCTGTTG 59.968 50.0 0.00 0.0 34.52 3.33 R
5250 5971 0.035725 CTGTGCCAGAGCCAGAATGA 60.036 55.0 0.00 0.0 38.72 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.983467 TGCTCCAATGCCTACACTGA 59.017 50.000 0.00 0.00 0.00 3.41
25 26 1.372582 CAATGCCTACACTGATGCGT 58.627 50.000 0.00 0.00 0.00 5.24
100 101 2.027625 GAACGTGAAGCCAGTCGGG 61.028 63.158 0.00 0.00 40.85 5.14
145 146 0.896940 AGAACACAGGCAGGCCAATG 60.897 55.000 13.63 12.15 38.92 2.82
190 191 3.882288 TGCAAACAGATAAGCAAGACACA 59.118 39.130 0.00 0.00 33.48 3.72
193 194 5.396484 CAAACAGATAAGCAAGACACATGG 58.604 41.667 0.00 0.00 0.00 3.66
194 195 3.012518 ACAGATAAGCAAGACACATGGC 58.987 45.455 0.00 0.00 0.00 4.40
195 196 2.031314 CAGATAAGCAAGACACATGGCG 59.969 50.000 0.00 0.00 0.00 5.69
196 197 2.009774 GATAAGCAAGACACATGGCGT 58.990 47.619 0.00 0.00 0.00 5.68
219 220 0.036732 TGTGACCTCATTCCACCTGC 59.963 55.000 0.00 0.00 0.00 4.85
229 230 1.565390 TTCCACCTGCATAGCCAGCT 61.565 55.000 0.00 0.00 0.00 4.24
231 232 1.886313 CACCTGCATAGCCAGCTCG 60.886 63.158 0.00 0.00 0.00 5.03
301 302 4.900635 AACGATAAAACTGATGGCATCC 57.099 40.909 23.92 7.43 0.00 3.51
732 755 0.456824 GTGAGAGCTGCACGATCGAA 60.457 55.000 24.34 5.92 32.02 3.71
927 960 2.267642 CGGACCATTGGCCGAGAA 59.732 61.111 25.14 0.00 42.08 2.87
971 1004 1.539388 CACTGAGCTTCTCTCACGTCT 59.461 52.381 0.00 0.00 46.34 4.18
972 1005 1.810151 ACTGAGCTTCTCTCACGTCTC 59.190 52.381 0.00 0.00 46.34 3.36
973 1006 2.083774 CTGAGCTTCTCTCACGTCTCT 58.916 52.381 0.00 0.00 46.34 3.10
974 1007 2.080693 TGAGCTTCTCTCACGTCTCTC 58.919 52.381 0.00 0.00 46.34 3.20
1021 1067 1.615424 GGGGCCTTCTCCTACCACA 60.615 63.158 0.84 0.00 0.00 4.17
1140 1186 2.261671 CAGGGCTACGCGTTCTGT 59.738 61.111 20.78 0.00 0.00 3.41
1492 1547 1.265454 GGTCTGGGTGGGAGTAGGTG 61.265 65.000 0.00 0.00 0.00 4.00
1643 1703 1.402984 CCAGTTTCTCTCGGAAGGACG 60.403 57.143 0.00 0.00 35.16 4.79
1790 1862 6.238648 GGTTTATTCATTTGATCGGTTCGGAT 60.239 38.462 0.00 0.00 0.00 4.18
1797 1869 1.466950 TGATCGGTTCGGATGCAAAAC 59.533 47.619 0.00 0.00 0.00 2.43
1809 1881 4.208253 CGGATGCAAAACAAAACCAGTAAC 59.792 41.667 0.00 0.00 0.00 2.50
1824 1896 3.119673 CCAGTAACAAAACCGCATGCATA 60.120 43.478 19.57 0.00 0.00 3.14
1825 1897 4.097714 CAGTAACAAAACCGCATGCATAG 58.902 43.478 19.57 8.19 0.00 2.23
1827 1899 3.932545 AACAAAACCGCATGCATAGAA 57.067 38.095 19.57 0.00 0.00 2.10
1828 1900 3.932545 ACAAAACCGCATGCATAGAAA 57.067 38.095 19.57 0.00 0.00 2.52
1829 1901 3.836949 ACAAAACCGCATGCATAGAAAG 58.163 40.909 19.57 3.99 0.00 2.62
1830 1902 2.566952 AAACCGCATGCATAGAAAGC 57.433 45.000 19.57 0.00 0.00 3.51
1831 1903 0.740737 AACCGCATGCATAGAAAGCC 59.259 50.000 19.57 0.00 0.00 4.35
1832 1904 1.280746 CCGCATGCATAGAAAGCCG 59.719 57.895 19.57 0.00 0.00 5.52
1833 1905 1.369689 CGCATGCATAGAAAGCCGC 60.370 57.895 19.57 0.00 0.00 6.53
1834 1906 1.779025 CGCATGCATAGAAAGCCGCT 61.779 55.000 19.57 0.00 0.00 5.52
1835 1907 1.229428 GCATGCATAGAAAGCCGCTA 58.771 50.000 14.21 0.00 0.00 4.26
1836 1908 1.603802 GCATGCATAGAAAGCCGCTAA 59.396 47.619 14.21 0.00 0.00 3.09
1837 1909 2.227388 GCATGCATAGAAAGCCGCTAAT 59.773 45.455 14.21 0.00 0.00 1.73
1838 1910 3.304928 GCATGCATAGAAAGCCGCTAATT 60.305 43.478 14.21 0.00 0.00 1.40
1839 1911 4.470462 CATGCATAGAAAGCCGCTAATTC 58.530 43.478 0.00 0.00 0.00 2.17
1840 1912 3.540617 TGCATAGAAAGCCGCTAATTCA 58.459 40.909 7.41 0.00 0.00 2.57
1841 1913 4.136796 TGCATAGAAAGCCGCTAATTCAT 58.863 39.130 7.41 0.00 0.00 2.57
1842 1914 4.580167 TGCATAGAAAGCCGCTAATTCATT 59.420 37.500 7.41 0.00 0.00 2.57
1843 1915 5.067674 TGCATAGAAAGCCGCTAATTCATTT 59.932 36.000 7.41 0.00 0.00 2.32
1844 1916 5.400485 GCATAGAAAGCCGCTAATTCATTTG 59.600 40.000 7.41 3.62 0.00 2.32
1845 1917 6.728200 CATAGAAAGCCGCTAATTCATTTGA 58.272 36.000 7.41 0.00 0.00 2.69
1846 1918 5.841957 AGAAAGCCGCTAATTCATTTGAT 57.158 34.783 7.41 0.00 0.00 2.57
1847 1919 5.825507 AGAAAGCCGCTAATTCATTTGATC 58.174 37.500 7.41 0.00 0.00 2.92
1848 1920 3.885484 AGCCGCTAATTCATTTGATCG 57.115 42.857 0.00 0.00 0.00 3.69
1877 1950 6.097129 TGGCCGGGTCCTTTATTTTTAATAAG 59.903 38.462 2.18 0.00 0.00 1.73
1904 2094 4.714632 TCAAAGTGAAAAGGTAGTGGGAG 58.285 43.478 0.00 0.00 0.00 4.30
1937 2132 3.243636 GCTAAATACGGTCATTCGGGAGA 60.244 47.826 0.00 0.00 0.00 3.71
1948 2167 4.753107 GTCATTCGGGAGACAAACTGTTTA 59.247 41.667 5.31 0.00 39.59 2.01
2006 2228 8.749354 GGGGTAAAATGTGAAATTCAGTCTAAT 58.251 33.333 0.00 0.00 0.00 1.73
2030 2252 8.992835 ATTTTTGCAACAGAGATAGAAAATCC 57.007 30.769 0.00 0.00 0.00 3.01
2032 2254 7.523293 TTTGCAACAGAGATAGAAAATCCAA 57.477 32.000 0.00 0.00 0.00 3.53
2033 2255 7.707624 TTGCAACAGAGATAGAAAATCCAAT 57.292 32.000 0.00 0.00 0.00 3.16
2034 2256 8.806429 TTGCAACAGAGATAGAAAATCCAATA 57.194 30.769 0.00 0.00 0.00 1.90
2035 2257 8.985315 TGCAACAGAGATAGAAAATCCAATAT 57.015 30.769 0.00 0.00 0.00 1.28
2036 2258 8.843262 TGCAACAGAGATAGAAAATCCAATATG 58.157 33.333 0.00 0.00 0.00 1.78
2084 2306 2.579410 TTTTGCAAGGTACTCCCTCC 57.421 50.000 0.00 0.00 45.47 4.30
2085 2307 1.440618 TTTGCAAGGTACTCCCTCCA 58.559 50.000 0.00 0.00 45.47 3.86
2090 2312 1.027815 AAGGTACTCCCTCCATCCCT 58.972 55.000 0.00 0.00 45.47 4.20
2092 2314 2.233178 AGGTACTCCCTCCATCCCTTA 58.767 52.381 0.00 0.00 40.71 2.69
2095 2317 4.426023 AGGTACTCCCTCCATCCCTTAATA 59.574 45.833 0.00 0.00 40.71 0.98
2098 2320 6.964086 GGTACTCCCTCCATCCCTTAATATAA 59.036 42.308 0.00 0.00 0.00 0.98
2101 2323 6.962902 ACTCCCTCCATCCCTTAATATAAGAG 59.037 42.308 0.00 0.00 0.00 2.85
2102 2324 6.886637 TCCCTCCATCCCTTAATATAAGAGT 58.113 40.000 0.00 0.00 0.00 3.24
2103 2325 6.730977 TCCCTCCATCCCTTAATATAAGAGTG 59.269 42.308 0.00 0.00 0.00 3.51
2107 2329 9.277783 CTCCATCCCTTAATATAAGAGTGTTTG 57.722 37.037 0.00 0.00 0.00 2.93
2123 2345 4.866508 TGTTTGTGACACTAGGGAGTAG 57.133 45.455 0.00 0.00 33.32 2.57
2145 2401 4.857799 GTAGTTAGCTACTTAAGGCTCCG 58.142 47.826 9.21 0.00 43.14 4.63
2354 2610 0.613853 TAGGCCTACACGTCCAGCTT 60.614 55.000 8.91 0.00 0.00 3.74
2355 2611 0.613853 AGGCCTACACGTCCAGCTTA 60.614 55.000 1.29 0.00 0.00 3.09
2356 2612 0.179108 GGCCTACACGTCCAGCTTAG 60.179 60.000 0.00 0.00 0.00 2.18
2357 2613 0.806492 GCCTACACGTCCAGCTTAGC 60.806 60.000 0.00 0.00 0.00 3.09
2416 2673 1.152819 CCTGTGCTGGCATGGCTAT 60.153 57.895 21.08 0.00 0.00 2.97
2435 2692 4.566070 GCTATAGTGTACCCACCACCAAAA 60.566 45.833 0.84 0.00 42.88 2.44
2451 2712 2.161609 CCAAAATCTTGTACAGCGTCCC 59.838 50.000 0.00 0.00 0.00 4.46
2465 2726 1.823976 GTCCCTGGTGGTAGCTAGC 59.176 63.158 16.08 16.08 34.77 3.42
2466 2727 0.688087 GTCCCTGGTGGTAGCTAGCT 60.688 60.000 23.12 23.12 34.77 3.32
2467 2728 0.931468 TCCCTGGTGGTAGCTAGCTA 59.069 55.000 20.67 20.67 34.77 3.32
2468 2729 1.133450 TCCCTGGTGGTAGCTAGCTAG 60.133 57.143 24.78 16.84 34.77 3.42
2531 2807 9.239002 CAGTGATAATGTCAGCTACTACTTAAC 57.761 37.037 0.00 0.00 37.56 2.01
2536 2812 5.386958 TGTCAGCTACTACTTAACCAGTG 57.613 43.478 0.00 0.00 35.97 3.66
2537 2813 4.831155 TGTCAGCTACTACTTAACCAGTGT 59.169 41.667 0.00 0.00 35.97 3.55
2539 2815 4.219944 TCAGCTACTACTTAACCAGTGTGG 59.780 45.833 0.00 0.00 45.02 4.17
2552 2828 3.245229 ACCAGTGTGGGATTGCTAAATCA 60.245 43.478 0.00 0.00 43.37 2.57
2565 2841 5.386958 TGCTAAATCACAGTCGACTAAGT 57.613 39.130 19.57 10.45 0.00 2.24
2568 2844 5.740099 GCTAAATCACAGTCGACTAAGTCTC 59.260 44.000 19.57 0.00 0.00 3.36
2581 2859 5.431420 ACTAAGTCTCAGTCGATGCTATG 57.569 43.478 0.00 0.00 0.00 2.23
2599 2877 7.958053 TGCTATGTTCATGAGATCTTATGTG 57.042 36.000 22.72 4.80 0.00 3.21
2605 2883 8.484641 TGTTCATGAGATCTTATGTGAAGAAC 57.515 34.615 22.72 19.02 0.00 3.01
2607 2885 8.939929 GTTCATGAGATCTTATGTGAAGAACAA 58.060 33.333 22.72 8.19 43.61 2.83
2608 2886 9.676861 TTCATGAGATCTTATGTGAAGAACAAT 57.323 29.630 22.72 0.00 43.61 2.71
2609 2887 9.106070 TCATGAGATCTTATGTGAAGAACAATG 57.894 33.333 22.72 0.00 43.61 2.82
2611 2889 6.880529 TGAGATCTTATGTGAAGAACAATGCA 59.119 34.615 0.00 0.00 43.61 3.96
2612 2890 7.065443 TGAGATCTTATGTGAAGAACAATGCAG 59.935 37.037 0.00 0.00 43.61 4.41
2613 2891 7.108194 AGATCTTATGTGAAGAACAATGCAGA 58.892 34.615 0.00 0.00 43.61 4.26
2614 2892 7.609146 AGATCTTATGTGAAGAACAATGCAGAA 59.391 33.333 0.00 0.00 43.61 3.02
2615 2893 7.509141 TCTTATGTGAAGAACAATGCAGAAA 57.491 32.000 0.00 0.00 43.61 2.52
2622 2900 7.765360 TGTGAAGAACAATGCAGAAAATTCTTT 59.235 29.630 12.62 1.96 36.72 2.52
2633 2911 9.905171 ATGCAGAAAATTCTTTTAGTTTCTCTC 57.095 29.630 0.00 0.00 38.05 3.20
2634 2912 9.125026 TGCAGAAAATTCTTTTAGTTTCTCTCT 57.875 29.630 0.00 0.00 38.05 3.10
2700 3032 7.996098 AGTTGACTAAGATCTAGCTATCCTC 57.004 40.000 0.00 0.00 0.00 3.71
2701 3033 7.522542 AGTTGACTAAGATCTAGCTATCCTCA 58.477 38.462 0.00 0.00 0.00 3.86
2702 3034 7.447238 AGTTGACTAAGATCTAGCTATCCTCAC 59.553 40.741 0.00 0.00 0.00 3.51
2703 3035 5.935206 TGACTAAGATCTAGCTATCCTCACG 59.065 44.000 0.00 0.00 0.00 4.35
2704 3036 4.698304 ACTAAGATCTAGCTATCCTCACGC 59.302 45.833 0.00 0.00 0.00 5.34
2705 3037 3.433306 AGATCTAGCTATCCTCACGCT 57.567 47.619 0.00 0.00 37.77 5.07
2706 3038 4.561500 AGATCTAGCTATCCTCACGCTA 57.438 45.455 0.00 0.00 35.33 4.26
2708 3040 2.911819 CTAGCTATCCTCACGCTAGC 57.088 55.000 4.06 4.06 44.43 3.42
2709 3041 3.430473 AGCTATCCTCACGCTAGCT 57.570 52.632 13.93 0.00 42.50 3.32
2710 3042 2.570415 AGCTATCCTCACGCTAGCTA 57.430 50.000 13.93 0.00 44.76 3.32
2711 3043 2.432444 AGCTATCCTCACGCTAGCTAG 58.568 52.381 16.84 16.84 44.76 3.42
2712 3044 2.039216 AGCTATCCTCACGCTAGCTAGA 59.961 50.000 25.15 9.35 44.76 2.43
2713 3045 3.013921 GCTATCCTCACGCTAGCTAGAT 58.986 50.000 25.15 8.54 35.95 1.98
2714 3046 4.080807 AGCTATCCTCACGCTAGCTAGATA 60.081 45.833 25.15 10.16 44.76 1.98
2715 3047 4.272504 GCTATCCTCACGCTAGCTAGATAG 59.727 50.000 25.15 18.87 35.95 2.08
2716 3048 3.060736 TCCTCACGCTAGCTAGATAGG 57.939 52.381 25.15 20.84 0.00 2.57
2717 3049 2.372504 TCCTCACGCTAGCTAGATAGGT 59.627 50.000 25.15 12.36 37.80 3.08
2732 3064 9.184523 AGCTAGATAGGTAGCAATATAGACAAG 57.815 37.037 5.72 0.00 46.81 3.16
2740 3072 7.287927 AGGTAGCAATATAGACAAGTGCTCTAA 59.712 37.037 0.91 0.00 44.16 2.10
2754 3086 5.059833 AGTGCTCTAAGTTTTCTCCTTGTG 58.940 41.667 0.00 0.00 0.00 3.33
2756 3088 4.141482 TGCTCTAAGTTTTCTCCTTGTGGT 60.141 41.667 0.00 0.00 34.23 4.16
2757 3089 5.071250 TGCTCTAAGTTTTCTCCTTGTGGTA 59.929 40.000 0.00 0.00 34.23 3.25
2782 3114 3.511934 ACACAGTCTGGAGACCATAGAAC 59.488 47.826 4.53 0.00 45.85 3.01
2795 3127 7.201893 GGAGACCATAGAACGTAGGAGTAATTT 60.202 40.741 0.00 0.00 0.00 1.82
2851 3183 3.096092 AGAACCACTTTTGACTTTGCCA 58.904 40.909 0.00 0.00 0.00 4.92
2852 3184 3.706086 AGAACCACTTTTGACTTTGCCAT 59.294 39.130 0.00 0.00 0.00 4.40
2853 3185 4.892934 AGAACCACTTTTGACTTTGCCATA 59.107 37.500 0.00 0.00 0.00 2.74
3018 3350 6.910972 CCATGTTCTTTTTGATCTCATCGATG 59.089 38.462 19.61 19.61 30.84 3.84
3173 3530 6.489675 CCATGTGAATGAAATGCAGTACTAC 58.510 40.000 0.00 0.00 27.29 2.73
3174 3531 6.317140 CCATGTGAATGAAATGCAGTACTACT 59.683 38.462 0.00 0.00 27.29 2.57
3175 3532 6.968131 TGTGAATGAAATGCAGTACTACTC 57.032 37.500 0.00 0.00 27.29 2.59
3223 3580 2.541588 CGATCGATGGGTGAAAAATGGC 60.542 50.000 10.26 0.00 0.00 4.40
3437 3798 2.997897 ACGGTGCTCCAGACCTCC 60.998 66.667 5.52 0.00 0.00 4.30
3551 3912 2.671963 GACACCTTCAACCCGCCC 60.672 66.667 0.00 0.00 0.00 6.13
3617 3978 0.323629 CCTACACCACCATCAACGGT 59.676 55.000 0.00 0.00 41.07 4.83
3650 4011 2.124487 AGCTCCGACCTCCTCTCG 60.124 66.667 0.00 0.00 0.00 4.04
3653 4014 1.523046 CTCCGACCTCCTCTCGAGA 59.477 63.158 15.70 15.70 41.63 4.04
3677 4038 0.494551 TCAAGGGAGACTGGGGGTTA 59.505 55.000 0.00 0.00 0.00 2.85
3788 4294 1.218316 CCTCAAGGCCGGTGAGTAC 59.782 63.158 27.74 0.00 40.83 2.73
3789 4295 1.541310 CCTCAAGGCCGGTGAGTACA 61.541 60.000 27.74 3.91 40.83 2.90
3790 4296 0.320374 CTCAAGGCCGGTGAGTACAA 59.680 55.000 24.09 0.13 38.16 2.41
3801 4307 2.286772 GGTGAGTACAACAGCAAAACCG 60.287 50.000 14.28 0.00 36.06 4.44
3834 4345 8.986477 AAAGGTCATTTGTTGCAGTTAATATC 57.014 30.769 0.00 0.00 0.00 1.63
4076 4699 4.961511 GACGTGTGCTCGCCCACA 62.962 66.667 0.00 4.20 42.99 4.17
4277 4900 2.039405 CAGGGGCTCCAGGGGTAT 60.039 66.667 4.79 0.00 34.83 2.73
4469 5092 1.221293 GCAGCAGAGCCTCATCACT 59.779 57.895 0.00 0.00 0.00 3.41
4742 5448 2.676265 GGCAACCGGATACCCTGGT 61.676 63.158 9.46 0.00 39.75 4.00
5208 5929 1.452108 CATTTCCTCAGGGTCGGCC 60.452 63.158 0.00 0.00 0.00 6.13
5222 5943 4.373116 GGCCAGGACGAGCACGAA 62.373 66.667 11.40 0.00 42.66 3.85
5250 5971 1.985116 GAGTCCTGAACCCGGAGCT 60.985 63.158 0.73 0.00 0.00 4.09
5268 5989 0.035725 CTCATTCTGGCTCTGGCACA 60.036 55.000 0.00 0.00 40.87 4.57
5499 6225 7.430760 AAAAAGGTATGTCTAGCTCTCATCT 57.569 36.000 0.00 0.00 34.63 2.90
5501 6227 7.759489 AAAGGTATGTCTAGCTCTCATCTAG 57.241 40.000 0.00 0.00 34.63 2.43
5508 6234 2.214376 AGCTCTCATCTAGATCCCCG 57.786 55.000 1.03 0.00 32.41 5.73
5583 6309 5.565592 TCAGCATGAATCTTTGCGTAAAT 57.434 34.783 0.00 0.00 45.97 1.40
5584 6310 6.676237 TCAGCATGAATCTTTGCGTAAATA 57.324 33.333 0.00 0.00 45.97 1.40
5594 6326 3.740044 TTGCGTAAATAGCACAAGAGC 57.260 42.857 0.00 0.00 45.10 4.09
5612 6344 7.600375 CACAAGAGCTAGATGAGACTTTGTTAA 59.400 37.037 0.00 0.00 0.00 2.01
5613 6345 8.150945 ACAAGAGCTAGATGAGACTTTGTTAAA 58.849 33.333 0.00 0.00 0.00 1.52
5614 6346 8.655092 CAAGAGCTAGATGAGACTTTGTTAAAG 58.345 37.037 0.00 0.05 44.10 1.85
5627 7096 7.231317 AGACTTTGTTAAAGATGAGAATTGGCA 59.769 33.333 8.18 0.00 41.02 4.92
5644 7113 8.829612 AGAATTGGCAAATCTGTTAACAAAAAG 58.170 29.630 16.69 0.00 0.00 2.27
5647 7116 5.056480 GGCAAATCTGTTAACAAAAAGCCT 58.944 37.500 21.75 0.49 34.59 4.58
5677 7146 6.961359 TTCAACCATAAGAGTTGTACATCG 57.039 37.500 0.00 0.00 44.02 3.84
5683 7152 5.923114 CCATAAGAGTTGTACATCGAGGATG 59.077 44.000 3.06 4.15 44.71 3.51
5696 7165 0.813821 GAGGATGAAAGGCTGGTTGC 59.186 55.000 0.00 0.00 41.94 4.17
5712 7181 2.287668 GGTTGCGCTCGTATCTACTGAT 60.288 50.000 9.73 0.00 36.74 2.90
5716 7185 3.127030 TGCGCTCGTATCTACTGATATGG 59.873 47.826 9.73 0.00 40.68 2.74
5726 7195 8.765219 CGTATCTACTGATATGGAAAAGGTTTG 58.235 37.037 0.00 0.00 38.10 2.93
5731 7200 6.981722 ACTGATATGGAAAAGGTTTGAACAC 58.018 36.000 0.00 0.00 0.00 3.32
5732 7201 6.777580 ACTGATATGGAAAAGGTTTGAACACT 59.222 34.615 0.00 0.00 0.00 3.55
5752 7221 6.064060 ACACTTTTGAGTCTGGATGAATTGA 58.936 36.000 0.00 0.00 0.00 2.57
5755 7224 8.086522 CACTTTTGAGTCTGGATGAATTGAAAT 58.913 33.333 0.00 0.00 0.00 2.17
5760 7229 7.855375 TGAGTCTGGATGAATTGAAATAGTCT 58.145 34.615 0.00 0.00 0.00 3.24
5776 7245 8.902806 TGAAATAGTCTGTTCAGTTTTGATTGT 58.097 29.630 0.00 0.00 32.27 2.71
5777 7246 9.387123 GAAATAGTCTGTTCAGTTTTGATTGTC 57.613 33.333 0.00 0.00 32.27 3.18
5796 7265 3.133362 TGTCGGACTAGGTTCAAAGTTGT 59.867 43.478 9.88 0.00 0.00 3.32
5804 7273 5.891551 ACTAGGTTCAAAGTTGTCCAACAAT 59.108 36.000 12.32 0.00 40.59 2.71
5839 7308 1.568504 AACTGATAGAGGGTTGCCGA 58.431 50.000 0.00 0.00 0.00 5.54
5886 7356 2.625790 AGAGTCCCTATTCAGCGCTTAG 59.374 50.000 7.50 7.51 0.00 2.18
5887 7357 2.623889 GAGTCCCTATTCAGCGCTTAGA 59.376 50.000 7.50 0.00 0.00 2.10
5888 7358 2.625790 AGTCCCTATTCAGCGCTTAGAG 59.374 50.000 7.50 5.47 0.00 2.43
5889 7359 1.341531 TCCCTATTCAGCGCTTAGAGC 59.658 52.381 7.50 0.00 38.02 4.09
5890 7360 1.069204 CCCTATTCAGCGCTTAGAGCA 59.931 52.381 7.50 0.00 42.58 4.26
5891 7361 2.289320 CCCTATTCAGCGCTTAGAGCAT 60.289 50.000 7.50 0.00 42.58 3.79
5892 7362 2.992543 CCTATTCAGCGCTTAGAGCATC 59.007 50.000 7.50 0.00 42.58 3.91
5918 7388 4.840401 TTTTCTCGAATACGCATGAGTG 57.160 40.909 12.80 0.00 39.58 3.51
5919 7389 3.503827 TTCTCGAATACGCATGAGTGT 57.496 42.857 12.80 2.11 42.14 3.55
5920 7390 2.797491 TCTCGAATACGCATGAGTGTG 58.203 47.619 12.80 0.00 39.22 3.82
5921 7391 1.256376 CTCGAATACGCATGAGTGTGC 59.744 52.381 12.80 3.04 39.47 4.57
5955 7425 7.954539 ATTAAAGAAGAGGATGGGGATTAGA 57.045 36.000 0.00 0.00 0.00 2.10
5956 7426 7.765149 TTAAAGAAGAGGATGGGGATTAGAA 57.235 36.000 0.00 0.00 0.00 2.10
5957 7427 5.903198 AAGAAGAGGATGGGGATTAGAAG 57.097 43.478 0.00 0.00 0.00 2.85
5958 7428 5.163259 AGAAGAGGATGGGGATTAGAAGA 57.837 43.478 0.00 0.00 0.00 2.87
5959 7429 4.904853 AGAAGAGGATGGGGATTAGAAGAC 59.095 45.833 0.00 0.00 0.00 3.01
5960 7430 3.592865 AGAGGATGGGGATTAGAAGACC 58.407 50.000 0.00 0.00 0.00 3.85
5961 7431 2.640332 GAGGATGGGGATTAGAAGACCC 59.360 54.545 0.00 0.00 43.64 4.46
5972 7442 2.928416 GAAGACCCCTTCACGTTGG 58.072 57.895 0.00 0.00 46.18 3.77
5973 7443 0.395312 GAAGACCCCTTCACGTTGGA 59.605 55.000 0.00 0.00 46.18 3.53
5974 7444 0.396811 AAGACCCCTTCACGTTGGAG 59.603 55.000 0.00 0.00 0.00 3.86
5975 7445 1.671379 GACCCCTTCACGTTGGAGC 60.671 63.158 0.00 0.00 0.00 4.70
5976 7446 2.113243 GACCCCTTCACGTTGGAGCT 62.113 60.000 0.00 0.00 0.00 4.09
5977 7447 0.834687 ACCCCTTCACGTTGGAGCTA 60.835 55.000 0.00 0.00 0.00 3.32
5978 7448 0.391263 CCCCTTCACGTTGGAGCTAC 60.391 60.000 0.00 0.00 0.00 3.58
5979 7449 0.320374 CCCTTCACGTTGGAGCTACA 59.680 55.000 0.00 0.00 0.00 2.74
5980 7450 1.270625 CCCTTCACGTTGGAGCTACAA 60.271 52.381 7.47 7.47 0.00 2.41
5981 7451 2.489971 CCTTCACGTTGGAGCTACAAA 58.510 47.619 14.43 0.00 31.17 2.83
5982 7452 2.480419 CCTTCACGTTGGAGCTACAAAG 59.520 50.000 21.39 21.39 36.19 2.77
5983 7453 2.902705 TCACGTTGGAGCTACAAAGT 57.097 45.000 22.73 22.73 42.36 2.66
5985 7455 2.902705 ACGTTGGAGCTACAAAGTGA 57.097 45.000 26.72 0.00 40.60 3.41
5986 7456 3.402628 ACGTTGGAGCTACAAAGTGAT 57.597 42.857 26.72 4.98 40.60 3.06
5987 7457 3.740115 ACGTTGGAGCTACAAAGTGATT 58.260 40.909 26.72 4.62 40.60 2.57
5988 7458 4.890088 ACGTTGGAGCTACAAAGTGATTA 58.110 39.130 26.72 0.00 40.60 1.75
5989 7459 4.689345 ACGTTGGAGCTACAAAGTGATTAC 59.311 41.667 26.72 6.27 40.60 1.89
5990 7460 4.688879 CGTTGGAGCTACAAAGTGATTACA 59.311 41.667 14.43 0.00 31.17 2.41
5991 7461 5.351465 CGTTGGAGCTACAAAGTGATTACAT 59.649 40.000 14.43 0.00 31.17 2.29
5992 7462 6.533723 CGTTGGAGCTACAAAGTGATTACATA 59.466 38.462 14.43 0.00 31.17 2.29
5993 7463 7.254117 CGTTGGAGCTACAAAGTGATTACATAG 60.254 40.741 14.43 0.00 31.17 2.23
5994 7464 7.182817 TGGAGCTACAAAGTGATTACATAGT 57.817 36.000 0.00 0.00 0.00 2.12
5995 7465 7.265673 TGGAGCTACAAAGTGATTACATAGTC 58.734 38.462 0.00 0.00 0.00 2.59
5996 7466 6.702282 GGAGCTACAAAGTGATTACATAGTCC 59.298 42.308 0.00 0.00 0.00 3.85
5997 7467 7.182817 AGCTACAAAGTGATTACATAGTCCA 57.817 36.000 0.00 0.00 0.00 4.02
5998 7468 7.620880 AGCTACAAAGTGATTACATAGTCCAA 58.379 34.615 0.00 0.00 0.00 3.53
5999 7469 7.549488 AGCTACAAAGTGATTACATAGTCCAAC 59.451 37.037 0.00 0.00 0.00 3.77
6000 7470 7.549488 GCTACAAAGTGATTACATAGTCCAACT 59.451 37.037 0.00 0.00 0.00 3.16
6001 7471 7.907214 ACAAAGTGATTACATAGTCCAACTC 57.093 36.000 0.00 0.00 0.00 3.01
6002 7472 6.879458 ACAAAGTGATTACATAGTCCAACTCC 59.121 38.462 0.00 0.00 0.00 3.85
6003 7473 6.620877 AAGTGATTACATAGTCCAACTCCA 57.379 37.500 0.00 0.00 0.00 3.86
6004 7474 5.978814 AGTGATTACATAGTCCAACTCCAC 58.021 41.667 0.00 0.00 0.00 4.02
6005 7475 5.104900 AGTGATTACATAGTCCAACTCCACC 60.105 44.000 0.00 0.00 0.00 4.61
6006 7476 4.163458 TGATTACATAGTCCAACTCCACCC 59.837 45.833 0.00 0.00 0.00 4.61
6007 7477 0.902531 ACATAGTCCAACTCCACCCG 59.097 55.000 0.00 0.00 0.00 5.28
6008 7478 1.191535 CATAGTCCAACTCCACCCGA 58.808 55.000 0.00 0.00 0.00 5.14
6009 7479 1.134788 CATAGTCCAACTCCACCCGAC 60.135 57.143 0.00 0.00 0.00 4.79
6010 7480 1.246056 TAGTCCAACTCCACCCGACG 61.246 60.000 0.00 0.00 0.00 5.12
6011 7481 3.998672 TCCAACTCCACCCGACGC 61.999 66.667 0.00 0.00 0.00 5.19
6012 7482 4.003788 CCAACTCCACCCGACGCT 62.004 66.667 0.00 0.00 0.00 5.07
6013 7483 2.030562 CAACTCCACCCGACGCTT 59.969 61.111 0.00 0.00 0.00 4.68
6014 7484 1.290955 CAACTCCACCCGACGCTTA 59.709 57.895 0.00 0.00 0.00 3.09
6015 7485 0.736325 CAACTCCACCCGACGCTTAG 60.736 60.000 0.00 0.00 0.00 2.18
6016 7486 0.896940 AACTCCACCCGACGCTTAGA 60.897 55.000 0.00 0.00 0.00 2.10
6017 7487 1.313812 ACTCCACCCGACGCTTAGAG 61.314 60.000 0.00 0.00 0.00 2.43
6018 7488 2.202756 CCACCCGACGCTTAGAGC 60.203 66.667 0.00 0.00 38.02 4.09
6019 7489 2.571757 CACCCGACGCTTAGAGCA 59.428 61.111 0.50 0.00 42.58 4.26
6020 7490 1.141881 CACCCGACGCTTAGAGCAT 59.858 57.895 0.50 0.00 42.58 3.79
6021 7491 0.872021 CACCCGACGCTTAGAGCATC 60.872 60.000 0.50 0.00 42.58 3.91
6034 7504 0.678950 GAGCATCTCTAGCAGACCCC 59.321 60.000 0.00 0.00 32.26 4.95
6035 7505 1.112315 AGCATCTCTAGCAGACCCCG 61.112 60.000 0.00 0.00 32.26 5.73
6036 7506 1.365633 CATCTCTAGCAGACCCCGC 59.634 63.158 0.00 0.00 32.26 6.13
6037 7507 1.075970 ATCTCTAGCAGACCCCGCA 60.076 57.895 0.00 0.00 32.26 5.69
6038 7508 0.470833 ATCTCTAGCAGACCCCGCAT 60.471 55.000 0.00 0.00 32.26 4.73
6039 7509 1.109920 TCTCTAGCAGACCCCGCATC 61.110 60.000 0.00 0.00 0.00 3.91
6040 7510 2.093537 CTCTAGCAGACCCCGCATCC 62.094 65.000 0.00 0.00 0.00 3.51
6041 7511 3.161450 TAGCAGACCCCGCATCCC 61.161 66.667 0.00 0.00 0.00 3.85
6070 7540 0.223513 CAAAACGCGTTTGCAGTTCG 59.776 50.000 35.31 15.11 40.25 3.95
6071 7541 1.468340 AAAACGCGTTTGCAGTTCGC 61.468 50.000 35.31 17.67 45.28 4.70
6074 7544 4.007940 GCGTTTGCAGTTCGCGGA 62.008 61.111 6.13 0.00 46.97 5.54
6075 7545 2.629210 CGTTTGCAGTTCGCGGAA 59.371 55.556 6.13 0.00 46.97 4.30
6076 7546 1.010574 CGTTTGCAGTTCGCGGAAA 60.011 52.632 6.13 0.00 46.97 3.13
6077 7547 0.590230 CGTTTGCAGTTCGCGGAAAA 60.590 50.000 6.13 0.00 46.97 2.29
6078 7548 1.551145 GTTTGCAGTTCGCGGAAAAA 58.449 45.000 6.13 0.00 46.97 1.94
6079 7549 1.254313 GTTTGCAGTTCGCGGAAAAAC 59.746 47.619 6.13 2.77 46.97 2.43
6080 7550 0.590230 TTGCAGTTCGCGGAAAAACG 60.590 50.000 6.13 1.38 46.97 3.60
6081 7551 1.724581 GCAGTTCGCGGAAAAACGG 60.725 57.895 6.13 5.16 0.00 4.44
6082 7552 1.644913 CAGTTCGCGGAAAAACGGT 59.355 52.632 6.13 0.00 0.00 4.83
6083 7553 0.028374 CAGTTCGCGGAAAAACGGTT 59.972 50.000 6.13 0.00 0.00 4.44
6084 7554 0.734309 AGTTCGCGGAAAAACGGTTT 59.266 45.000 6.13 0.00 0.00 3.27
6085 7555 1.132834 AGTTCGCGGAAAAACGGTTTT 59.867 42.857 11.76 11.76 39.70 2.43
6086 7556 1.253289 GTTCGCGGAAAAACGGTTTTG 59.747 47.619 17.41 3.59 37.07 2.44
6087 7557 0.866483 TCGCGGAAAAACGGTTTTGC 60.866 50.000 17.41 18.33 40.57 3.68
6088 7558 1.140407 CGCGGAAAAACGGTTTTGCA 61.140 50.000 26.52 0.00 43.22 4.08
6089 7559 0.574922 GCGGAAAAACGGTTTTGCAG 59.425 50.000 26.52 19.69 43.22 4.41
6090 7560 1.204792 CGGAAAAACGGTTTTGCAGG 58.795 50.000 26.52 10.29 43.22 4.85
6091 7561 1.470112 CGGAAAAACGGTTTTGCAGGT 60.470 47.619 26.52 6.88 43.22 4.00
6092 7562 2.198406 GGAAAAACGGTTTTGCAGGTC 58.802 47.619 23.25 14.19 42.75 3.85
6093 7563 1.849829 GAAAAACGGTTTTGCAGGTCG 59.150 47.619 17.41 0.00 37.07 4.79
6094 7564 0.101579 AAAACGGTTTTGCAGGTCGG 59.898 50.000 17.42 0.00 0.00 4.79
6095 7565 2.344521 AAACGGTTTTGCAGGTCGGC 62.345 55.000 0.00 0.00 0.00 5.54
6096 7566 4.383602 CGGTTTTGCAGGTCGGCG 62.384 66.667 0.00 0.00 36.28 6.46
6097 7567 4.700365 GGTTTTGCAGGTCGGCGC 62.700 66.667 0.00 0.00 36.28 6.53
6115 7585 4.803426 GGACGGTCGCAGAGGCAG 62.803 72.222 1.43 0.00 41.24 4.85
6116 7586 3.749064 GACGGTCGCAGAGGCAGA 61.749 66.667 0.00 0.00 41.24 4.26
6117 7587 3.973267 GACGGTCGCAGAGGCAGAC 62.973 68.421 0.00 0.00 41.24 3.51
6121 7591 3.385384 TCGCAGAGGCAGACCCTG 61.385 66.667 0.00 0.00 46.60 4.45
6130 7600 4.473643 CAGACCCTGCAAAACGGA 57.526 55.556 0.00 0.00 0.00 4.69
6131 7601 1.949257 CAGACCCTGCAAAACGGAC 59.051 57.895 0.00 0.00 0.00 4.79
6132 7602 1.228154 AGACCCTGCAAAACGGACC 60.228 57.895 0.00 0.00 0.00 4.46
6133 7603 2.203437 ACCCTGCAAAACGGACCC 60.203 61.111 0.00 0.00 0.00 4.46
6134 7604 3.361977 CCCTGCAAAACGGACCCG 61.362 66.667 6.94 6.94 46.03 5.28
6150 7620 4.860907 CGGACCCGTATAAAAGGATATTCG 59.139 45.833 0.00 0.00 34.35 3.34
6151 7621 4.628766 GGACCCGTATAAAAGGATATTCGC 59.371 45.833 0.00 0.00 0.00 4.70
6152 7622 4.240096 ACCCGTATAAAAGGATATTCGCG 58.760 43.478 0.00 0.00 0.00 5.87
6153 7623 3.615496 CCCGTATAAAAGGATATTCGCGG 59.385 47.826 6.13 0.00 35.79 6.46
6154 7624 4.487948 CCGTATAAAAGGATATTCGCGGA 58.512 43.478 6.13 0.00 37.92 5.54
6155 7625 4.925054 CCGTATAAAAGGATATTCGCGGAA 59.075 41.667 6.13 0.00 37.92 4.30
6156 7626 5.579511 CCGTATAAAAGGATATTCGCGGAAT 59.420 40.000 6.13 7.64 37.92 3.01
6157 7627 6.753279 CCGTATAAAAGGATATTCGCGGAATA 59.247 38.462 6.13 9.72 38.61 1.75
6158 7628 7.437267 CCGTATAAAAGGATATTCGCGGAATAT 59.563 37.037 17.76 17.76 44.72 1.28
6159 7629 8.266682 CGTATAAAAGGATATTCGCGGAATATG 58.733 37.037 20.79 2.74 42.89 1.78
6160 7630 4.946784 AAAGGATATTCGCGGAATATGC 57.053 40.909 22.63 22.63 46.44 3.14
6163 7633 3.786635 GGATATTCGCGGAATATGCTCT 58.213 45.455 22.73 7.70 44.36 4.09
6164 7634 4.184629 GGATATTCGCGGAATATGCTCTT 58.815 43.478 22.73 7.21 44.36 2.85
6165 7635 4.631813 GGATATTCGCGGAATATGCTCTTT 59.368 41.667 22.73 6.72 44.36 2.52
6166 7636 5.122396 GGATATTCGCGGAATATGCTCTTTT 59.878 40.000 22.73 6.23 44.36 2.27
6167 7637 6.312918 GGATATTCGCGGAATATGCTCTTTTA 59.687 38.462 22.73 0.00 44.36 1.52
6168 7638 4.789095 TTCGCGGAATATGCTCTTTTAC 57.211 40.909 6.13 0.00 0.00 2.01
6169 7639 2.792674 TCGCGGAATATGCTCTTTTACG 59.207 45.455 6.13 0.00 0.00 3.18
6170 7640 2.096909 CGCGGAATATGCTCTTTTACGG 60.097 50.000 0.00 0.00 0.00 4.02
6171 7641 2.223377 GCGGAATATGCTCTTTTACGGG 59.777 50.000 0.00 0.00 0.00 5.28
6172 7642 3.463944 CGGAATATGCTCTTTTACGGGT 58.536 45.455 0.00 0.00 0.00 5.28
6173 7643 3.875134 CGGAATATGCTCTTTTACGGGTT 59.125 43.478 0.00 0.00 0.00 4.11
6174 7644 4.260620 CGGAATATGCTCTTTTACGGGTTG 60.261 45.833 0.00 0.00 0.00 3.77
6175 7645 4.036380 GGAATATGCTCTTTTACGGGTTGG 59.964 45.833 0.00 0.00 0.00 3.77
6176 7646 2.579410 ATGCTCTTTTACGGGTTGGT 57.421 45.000 0.00 0.00 0.00 3.67
6177 7647 2.351706 TGCTCTTTTACGGGTTGGTT 57.648 45.000 0.00 0.00 0.00 3.67
6178 7648 2.657143 TGCTCTTTTACGGGTTGGTTT 58.343 42.857 0.00 0.00 0.00 3.27
6179 7649 3.025262 TGCTCTTTTACGGGTTGGTTTT 58.975 40.909 0.00 0.00 0.00 2.43
6180 7650 4.205587 TGCTCTTTTACGGGTTGGTTTTA 58.794 39.130 0.00 0.00 0.00 1.52
6181 7651 4.276431 TGCTCTTTTACGGGTTGGTTTTAG 59.724 41.667 0.00 0.00 0.00 1.85
6182 7652 4.790878 CTCTTTTACGGGTTGGTTTTAGC 58.209 43.478 0.00 0.00 0.00 3.09
6183 7653 4.463070 TCTTTTACGGGTTGGTTTTAGCT 58.537 39.130 0.00 0.00 0.00 3.32
6184 7654 4.276431 TCTTTTACGGGTTGGTTTTAGCTG 59.724 41.667 0.00 0.00 0.00 4.24
6185 7655 1.525941 TACGGGTTGGTTTTAGCTGC 58.474 50.000 0.00 0.00 0.00 5.25
6186 7656 1.209127 CGGGTTGGTTTTAGCTGCG 59.791 57.895 0.00 0.00 0.00 5.18
6187 7657 1.584495 GGGTTGGTTTTAGCTGCGG 59.416 57.895 0.00 0.00 0.00 5.69
6188 7658 1.080772 GGTTGGTTTTAGCTGCGGC 60.081 57.895 10.33 10.33 39.06 6.53
6189 7659 1.657556 GTTGGTTTTAGCTGCGGCA 59.342 52.632 21.93 1.29 41.70 5.69
6190 7660 0.387239 GTTGGTTTTAGCTGCGGCAG 60.387 55.000 25.21 25.21 41.70 4.85
6191 7661 0.536233 TTGGTTTTAGCTGCGGCAGA 60.536 50.000 32.72 10.88 41.70 4.26
6192 7662 0.536233 TGGTTTTAGCTGCGGCAGAA 60.536 50.000 32.72 16.50 41.70 3.02
6193 7663 0.811281 GGTTTTAGCTGCGGCAGAAT 59.189 50.000 32.72 21.44 41.70 2.40
6194 7664 2.014128 GGTTTTAGCTGCGGCAGAATA 58.986 47.619 32.72 20.42 41.70 1.75
6195 7665 2.032178 GGTTTTAGCTGCGGCAGAATAG 59.968 50.000 32.72 8.04 41.70 1.73
6196 7666 2.936498 GTTTTAGCTGCGGCAGAATAGA 59.064 45.455 32.72 16.19 41.70 1.98
6197 7667 2.225068 TTAGCTGCGGCAGAATAGAC 57.775 50.000 32.72 14.01 41.70 2.59
6198 7668 0.389391 TAGCTGCGGCAGAATAGACC 59.611 55.000 32.72 13.29 41.70 3.85
6199 7669 1.889573 GCTGCGGCAGAATAGACCC 60.890 63.158 32.72 9.11 38.54 4.46
6200 7670 1.227674 CTGCGGCAGAATAGACCCC 60.228 63.158 25.33 0.00 32.44 4.95
6201 7671 1.689233 TGCGGCAGAATAGACCCCT 60.689 57.895 0.00 0.00 0.00 4.79
6202 7672 1.069935 GCGGCAGAATAGACCCCTC 59.930 63.158 0.00 0.00 0.00 4.30
6203 7673 1.686325 GCGGCAGAATAGACCCCTCA 61.686 60.000 0.00 0.00 0.00 3.86
6204 7674 0.830648 CGGCAGAATAGACCCCTCAA 59.169 55.000 0.00 0.00 0.00 3.02
6205 7675 1.209504 CGGCAGAATAGACCCCTCAAA 59.790 52.381 0.00 0.00 0.00 2.69
6206 7676 2.644676 GGCAGAATAGACCCCTCAAAC 58.355 52.381 0.00 0.00 0.00 2.93
6207 7677 2.239907 GGCAGAATAGACCCCTCAAACT 59.760 50.000 0.00 0.00 0.00 2.66
6208 7678 3.308473 GGCAGAATAGACCCCTCAAACTT 60.308 47.826 0.00 0.00 0.00 2.66
6209 7679 4.080526 GGCAGAATAGACCCCTCAAACTTA 60.081 45.833 0.00 0.00 0.00 2.24
6210 7680 5.497474 GCAGAATAGACCCCTCAAACTTAA 58.503 41.667 0.00 0.00 0.00 1.85
6211 7681 5.586643 GCAGAATAGACCCCTCAAACTTAAG 59.413 44.000 0.00 0.00 0.00 1.85
6212 7682 5.586643 CAGAATAGACCCCTCAAACTTAAGC 59.413 44.000 1.29 0.00 0.00 3.09
6213 7683 5.489278 AGAATAGACCCCTCAAACTTAAGCT 59.511 40.000 1.29 0.00 0.00 3.74
6214 7684 3.425162 AGACCCCTCAAACTTAAGCTG 57.575 47.619 1.29 0.38 0.00 4.24
6215 7685 2.711547 AGACCCCTCAAACTTAAGCTGT 59.288 45.455 1.29 0.00 0.00 4.40
6216 7686 3.908103 AGACCCCTCAAACTTAAGCTGTA 59.092 43.478 1.29 0.00 0.00 2.74
6217 7687 4.349930 AGACCCCTCAAACTTAAGCTGTAA 59.650 41.667 1.29 0.00 0.00 2.41
6218 7688 5.056553 ACCCCTCAAACTTAAGCTGTAAA 57.943 39.130 1.29 0.00 0.00 2.01
6219 7689 5.451354 ACCCCTCAAACTTAAGCTGTAAAA 58.549 37.500 1.29 0.00 0.00 1.52
6220 7690 5.301045 ACCCCTCAAACTTAAGCTGTAAAAC 59.699 40.000 1.29 0.00 0.00 2.43
6221 7691 5.449304 CCCTCAAACTTAAGCTGTAAAACG 58.551 41.667 1.29 0.00 0.00 3.60
6222 7692 5.449304 CCTCAAACTTAAGCTGTAAAACGG 58.551 41.667 1.29 0.00 0.00 4.44
6223 7693 5.237779 CCTCAAACTTAAGCTGTAAAACGGA 59.762 40.000 1.29 0.00 0.00 4.69
6224 7694 6.238538 CCTCAAACTTAAGCTGTAAAACGGAA 60.239 38.462 1.29 0.00 0.00 4.30
6225 7695 7.266922 TCAAACTTAAGCTGTAAAACGGAAT 57.733 32.000 1.29 0.00 0.00 3.01
6226 7696 8.380743 TCAAACTTAAGCTGTAAAACGGAATA 57.619 30.769 1.29 0.00 0.00 1.75
6227 7697 9.005777 TCAAACTTAAGCTGTAAAACGGAATAT 57.994 29.630 1.29 0.00 0.00 1.28
6228 7698 9.620660 CAAACTTAAGCTGTAAAACGGAATATT 57.379 29.630 1.29 0.00 0.00 1.28
6229 7699 9.836076 AAACTTAAGCTGTAAAACGGAATATTC 57.164 29.630 6.93 6.93 0.00 1.75
6230 7700 7.681903 ACTTAAGCTGTAAAACGGAATATTCG 58.318 34.615 9.32 7.42 0.00 3.34
6231 7701 4.531659 AGCTGTAAAACGGAATATTCGC 57.468 40.909 9.32 4.06 0.00 4.70
6232 7702 4.189231 AGCTGTAAAACGGAATATTCGCT 58.811 39.130 9.32 6.19 0.00 4.93
6233 7703 4.634443 AGCTGTAAAACGGAATATTCGCTT 59.366 37.500 9.32 0.44 0.00 4.68
6234 7704 5.813672 AGCTGTAAAACGGAATATTCGCTTA 59.186 36.000 9.32 2.18 0.00 3.09
6235 7705 6.482308 AGCTGTAAAACGGAATATTCGCTTAT 59.518 34.615 9.32 0.00 0.00 1.73
6236 7706 7.654520 AGCTGTAAAACGGAATATTCGCTTATA 59.345 33.333 9.32 2.77 0.00 0.98
6237 7707 8.440833 GCTGTAAAACGGAATATTCGCTTATAT 58.559 33.333 9.32 0.00 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 0.320421 GGTAGTGGTGTGTCACGCAT 60.320 55.000 17.89 6.18 42.10 4.73
25 26 0.466543 GTGGTGGTAGTGGTGTGTCA 59.533 55.000 0.00 0.00 0.00 3.58
100 101 2.175811 GTGGTGTCCGCGATTTGC 59.824 61.111 8.23 0.00 41.47 3.68
145 146 6.797033 GCAGTTGTGTTTACATAGAATGACAC 59.203 38.462 0.00 0.00 36.57 3.67
190 191 4.314440 AGGTCACACGCACGCCAT 62.314 61.111 0.00 0.00 0.00 4.40
193 194 2.227968 GAATGAGGTCACACGCACGC 62.228 60.000 0.00 0.00 0.00 5.34
194 195 1.626654 GGAATGAGGTCACACGCACG 61.627 60.000 0.00 0.00 0.00 5.34
195 196 0.602638 TGGAATGAGGTCACACGCAC 60.603 55.000 0.00 0.00 0.00 5.34
196 197 0.602638 GTGGAATGAGGTCACACGCA 60.603 55.000 0.00 0.00 0.00 5.24
229 230 2.992689 TGCCACGTTAGGAGCCGA 60.993 61.111 0.00 0.00 0.00 5.54
231 232 2.033194 GTGTGCCACGTTAGGAGCC 61.033 63.158 0.00 0.00 0.00 4.70
301 302 1.467734 GCATGCAGAGACAAGTGAAGG 59.532 52.381 14.21 0.00 0.00 3.46
411 412 1.683441 CACCCTAACCACCCCTGAC 59.317 63.158 0.00 0.00 0.00 3.51
732 755 1.750193 CCATGCCGTTCAATGTAGGT 58.250 50.000 0.00 0.00 0.00 3.08
889 922 3.149981 GGTTGAAACTAGAAAGCTGGCT 58.850 45.455 0.00 0.00 0.00 4.75
971 1004 0.191064 AGTTGTGGAGGGTGAGGAGA 59.809 55.000 0.00 0.00 0.00 3.71
972 1005 0.322975 CAGTTGTGGAGGGTGAGGAG 59.677 60.000 0.00 0.00 0.00 3.69
973 1006 0.105194 TCAGTTGTGGAGGGTGAGGA 60.105 55.000 0.00 0.00 0.00 3.71
974 1007 0.764890 TTCAGTTGTGGAGGGTGAGG 59.235 55.000 0.00 0.00 0.00 3.86
1437 1483 4.891727 CGCCCATCTTCCCGTCGG 62.892 72.222 3.60 3.60 0.00 4.79
1445 1491 3.086733 GCTTTCTAGCGCCCATCTT 57.913 52.632 2.29 0.00 37.71 2.40
1492 1547 2.938798 TGTCCCACACCCCATCCC 60.939 66.667 0.00 0.00 0.00 3.85
1623 1683 1.402984 CGTCCTTCCGAGAGAAACTGG 60.403 57.143 0.00 0.00 32.88 4.00
1643 1703 0.392193 CACCAGGTCACCATCAGAGC 60.392 60.000 0.00 0.00 0.00 4.09
1727 1799 8.190326 TCTCTCTCAAAAAGGTGTACTTATGA 57.810 34.615 0.00 0.00 38.85 2.15
1769 1841 4.213270 GCATCCGAACCGATCAAATGAATA 59.787 41.667 0.00 0.00 0.00 1.75
1790 1862 6.293462 GGTTTTGTTACTGGTTTTGTTTTGCA 60.293 34.615 0.00 0.00 0.00 4.08
1797 1869 3.512680 TGCGGTTTTGTTACTGGTTTTG 58.487 40.909 0.00 0.00 0.00 2.44
1809 1881 2.599973 GCTTTCTATGCATGCGGTTTTG 59.400 45.455 14.09 1.71 0.00 2.44
1824 1896 5.504665 CGATCAAATGAATTAGCGGCTTTCT 60.505 40.000 8.26 0.00 0.00 2.52
1825 1897 4.672413 CGATCAAATGAATTAGCGGCTTTC 59.328 41.667 8.26 7.69 0.00 2.62
1827 1899 3.003689 CCGATCAAATGAATTAGCGGCTT 59.996 43.478 8.26 0.00 0.00 4.35
1828 1900 2.549754 CCGATCAAATGAATTAGCGGCT 59.450 45.455 7.98 7.98 0.00 5.52
1829 1901 2.290641 ACCGATCAAATGAATTAGCGGC 59.709 45.455 0.00 0.00 41.04 6.53
1830 1902 5.390885 CCATACCGATCAAATGAATTAGCGG 60.391 44.000 0.00 0.00 42.85 5.52
1831 1903 5.621422 CCATACCGATCAAATGAATTAGCG 58.379 41.667 0.00 0.00 0.00 4.26
1832 1904 5.393962 GCCATACCGATCAAATGAATTAGC 58.606 41.667 0.00 0.00 0.00 3.09
1833 1905 5.942872 GGCCATACCGATCAAATGAATTAG 58.057 41.667 0.00 0.00 0.00 1.73
1834 1906 5.957842 GGCCATACCGATCAAATGAATTA 57.042 39.130 0.00 0.00 0.00 1.40
1835 1907 4.853924 GGCCATACCGATCAAATGAATT 57.146 40.909 0.00 0.00 0.00 2.17
1848 1920 0.769247 ATAAAGGACCCGGCCATACC 59.231 55.000 2.24 0.00 0.00 2.73
1877 1950 7.610305 TCCCACTACCTTTTCACTTTGATTATC 59.390 37.037 0.00 0.00 0.00 1.75
1883 1956 4.461198 ACTCCCACTACCTTTTCACTTTG 58.539 43.478 0.00 0.00 0.00 2.77
1925 2120 2.767505 ACAGTTTGTCTCCCGAATGAC 58.232 47.619 0.00 0.00 0.00 3.06
1937 2132 9.791820 ACGCTTATAAACTTTTAAACAGTTTGT 57.208 25.926 23.82 21.37 43.02 2.83
1980 2202 6.590234 AGACTGAATTTCACATTTTACCCC 57.410 37.500 0.00 0.00 0.00 4.95
2006 2228 7.950512 TGGATTTTCTATCTCTGTTGCAAAAA 58.049 30.769 0.00 0.00 0.00 1.94
2011 2233 8.844244 ACATATTGGATTTTCTATCTCTGTTGC 58.156 33.333 0.00 0.00 0.00 4.17
2030 2252 6.126568 TCACATGCATGAGACAACATATTG 57.873 37.500 32.75 15.33 41.98 1.90
2032 2254 6.954487 AATCACATGCATGAGACAACATAT 57.046 33.333 32.75 10.71 30.44 1.78
2033 2255 9.729281 ATATAATCACATGCATGAGACAACATA 57.271 29.630 32.75 21.48 30.44 2.29
2034 2256 6.954487 ATAATCACATGCATGAGACAACAT 57.046 33.333 32.75 16.87 30.44 2.71
2035 2257 7.935210 AGATATAATCACATGCATGAGACAACA 59.065 33.333 32.75 16.15 30.44 3.33
2036 2258 8.320396 AGATATAATCACATGCATGAGACAAC 57.680 34.615 32.75 17.02 30.44 3.32
2077 2299 6.962902 ACTCTTATATTAAGGGATGGAGGGAG 59.037 42.308 1.27 0.00 0.00 4.30
2079 2301 6.502158 ACACTCTTATATTAAGGGATGGAGGG 59.498 42.308 1.27 0.00 0.00 4.30
2082 2304 8.778059 ACAAACACTCTTATATTAAGGGATGGA 58.222 33.333 1.27 0.00 0.00 3.41
2084 2306 9.613428 TCACAAACACTCTTATATTAAGGGATG 57.387 33.333 1.27 0.00 0.00 3.51
2085 2307 9.614792 GTCACAAACACTCTTATATTAAGGGAT 57.385 33.333 1.27 0.00 0.00 3.85
2102 2324 4.220724 ACTACTCCCTAGTGTCACAAACA 58.779 43.478 5.62 0.00 36.36 2.83
2103 2325 4.868314 ACTACTCCCTAGTGTCACAAAC 57.132 45.455 5.62 0.00 36.36 2.93
2107 2329 5.296531 GCTAACTACTACTCCCTAGTGTCAC 59.703 48.000 0.00 0.00 36.29 3.67
2145 2401 7.498443 AGTGTAGCTAGTATGGGTTAATTGAC 58.502 38.462 0.00 0.00 0.00 3.18
2356 2612 1.213799 GCACAAAAGGCTAGCTGGC 59.786 57.895 14.65 14.65 42.15 4.85
2357 2613 1.237285 ACGCACAAAAGGCTAGCTGG 61.237 55.000 15.72 0.00 0.00 4.85
2416 2673 3.653836 AGATTTTGGTGGTGGGTACACTA 59.346 43.478 0.00 0.00 46.85 2.74
2435 2692 0.537188 CCAGGGACGCTGTACAAGAT 59.463 55.000 17.35 0.00 0.00 2.40
2451 2712 1.333177 CCCTAGCTAGCTACCACCAG 58.667 60.000 20.67 11.41 0.00 4.00
2465 2726 2.764637 AAACCAGCAACGCCCCCTAG 62.765 60.000 0.00 0.00 0.00 3.02
2466 2727 2.836187 AAACCAGCAACGCCCCCTA 61.836 57.895 0.00 0.00 0.00 3.53
2467 2728 4.218686 AAACCAGCAACGCCCCCT 62.219 61.111 0.00 0.00 0.00 4.79
2468 2729 3.989787 CAAACCAGCAACGCCCCC 61.990 66.667 0.00 0.00 0.00 5.40
2531 2807 3.129287 GTGATTTAGCAATCCCACACTGG 59.871 47.826 0.00 0.00 38.50 4.00
2536 2812 3.063997 CGACTGTGATTTAGCAATCCCAC 59.936 47.826 0.00 0.00 38.50 4.61
2537 2813 3.055458 TCGACTGTGATTTAGCAATCCCA 60.055 43.478 0.00 0.00 38.50 4.37
2539 2815 4.184629 AGTCGACTGTGATTTAGCAATCC 58.815 43.478 19.30 0.00 38.50 3.01
2565 2841 4.339247 TCATGAACATAGCATCGACTGAGA 59.661 41.667 0.00 0.00 0.00 3.27
2568 2844 4.614946 TCTCATGAACATAGCATCGACTG 58.385 43.478 0.00 0.00 0.00 3.51
2576 2854 8.599055 TTCACATAAGATCTCATGAACATAGC 57.401 34.615 13.09 0.00 0.00 2.97
2581 2859 8.484641 TGTTCTTCACATAAGATCTCATGAAC 57.515 34.615 13.09 6.64 0.00 3.18
2675 3007 8.661345 TGAGGATAGCTAGATCTTAGTCAACTA 58.339 37.037 0.00 0.00 0.00 2.24
2676 3008 7.447238 GTGAGGATAGCTAGATCTTAGTCAACT 59.553 40.741 0.00 0.00 0.00 3.16
2677 3009 7.572353 CGTGAGGATAGCTAGATCTTAGTCAAC 60.572 44.444 0.00 0.00 0.00 3.18
2678 3010 6.428465 CGTGAGGATAGCTAGATCTTAGTCAA 59.572 42.308 0.00 0.00 0.00 3.18
2680 3012 5.163794 GCGTGAGGATAGCTAGATCTTAGTC 60.164 48.000 0.00 0.00 0.00 2.59
2681 3013 4.698304 GCGTGAGGATAGCTAGATCTTAGT 59.302 45.833 0.00 0.00 0.00 2.24
2682 3014 4.941263 AGCGTGAGGATAGCTAGATCTTAG 59.059 45.833 0.00 0.00 39.74 2.18
2684 3016 3.761897 AGCGTGAGGATAGCTAGATCTT 58.238 45.455 0.00 0.00 39.74 2.40
2685 3017 3.433306 AGCGTGAGGATAGCTAGATCT 57.567 47.619 0.00 0.00 39.74 2.75
2693 3025 4.814234 CCTATCTAGCTAGCGTGAGGATAG 59.186 50.000 16.35 22.87 37.69 2.08
2694 3026 4.225492 ACCTATCTAGCTAGCGTGAGGATA 59.775 45.833 24.86 17.68 0.00 2.59
2695 3027 3.009695 ACCTATCTAGCTAGCGTGAGGAT 59.990 47.826 24.86 17.55 0.00 3.24
2696 3028 2.372504 ACCTATCTAGCTAGCGTGAGGA 59.627 50.000 24.86 13.16 0.00 3.71
2697 3029 2.785562 ACCTATCTAGCTAGCGTGAGG 58.214 52.381 16.35 18.66 0.00 3.86
2698 3030 3.372822 GCTACCTATCTAGCTAGCGTGAG 59.627 52.174 16.35 8.47 36.88 3.51
2699 3031 3.244457 TGCTACCTATCTAGCTAGCGTGA 60.244 47.826 16.35 11.90 39.31 4.35
2700 3032 3.075148 TGCTACCTATCTAGCTAGCGTG 58.925 50.000 16.35 6.37 39.31 5.34
2701 3033 3.420300 TGCTACCTATCTAGCTAGCGT 57.580 47.619 16.35 9.51 39.31 5.07
2702 3034 4.974368 ATTGCTACCTATCTAGCTAGCG 57.026 45.455 16.35 6.70 39.31 4.26
2703 3035 8.780249 GTCTATATTGCTACCTATCTAGCTAGC 58.220 40.741 16.35 6.62 40.02 3.42
2704 3036 9.839817 TGTCTATATTGCTACCTATCTAGCTAG 57.160 37.037 15.01 15.01 40.02 3.42
2706 3038 9.184523 CTTGTCTATATTGCTACCTATCTAGCT 57.815 37.037 0.00 0.00 40.02 3.32
2707 3039 8.962679 ACTTGTCTATATTGCTACCTATCTAGC 58.037 37.037 0.00 0.00 39.81 3.42
2709 3041 8.740906 GCACTTGTCTATATTGCTACCTATCTA 58.259 37.037 0.00 0.00 0.00 1.98
2710 3042 7.453126 AGCACTTGTCTATATTGCTACCTATCT 59.547 37.037 0.00 0.00 41.72 1.98
2711 3043 7.607250 AGCACTTGTCTATATTGCTACCTATC 58.393 38.462 0.00 0.00 41.72 2.08
2712 3044 7.453126 AGAGCACTTGTCTATATTGCTACCTAT 59.547 37.037 0.00 0.00 43.53 2.57
2713 3045 6.778069 AGAGCACTTGTCTATATTGCTACCTA 59.222 38.462 0.00 0.00 43.53 3.08
2714 3046 5.600484 AGAGCACTTGTCTATATTGCTACCT 59.400 40.000 0.00 0.00 43.53 3.08
2715 3047 5.848406 AGAGCACTTGTCTATATTGCTACC 58.152 41.667 0.00 0.00 43.53 3.18
2716 3048 8.138712 ACTTAGAGCACTTGTCTATATTGCTAC 58.861 37.037 0.00 0.00 43.53 3.58
2717 3049 8.239038 ACTTAGAGCACTTGTCTATATTGCTA 57.761 34.615 0.00 0.00 43.53 3.49
2732 3064 4.214332 CCACAAGGAGAAAACTTAGAGCAC 59.786 45.833 0.00 0.00 36.89 4.40
2740 3072 5.063880 GTGTCATACCACAAGGAGAAAACT 58.936 41.667 0.00 0.00 38.69 2.66
2754 3086 2.166664 GGTCTCCAGACTGTGTCATACC 59.833 54.545 6.68 0.00 44.20 2.73
2756 3088 3.169512 TGGTCTCCAGACTGTGTCATA 57.830 47.619 6.68 0.00 44.20 2.15
2757 3089 2.015456 TGGTCTCCAGACTGTGTCAT 57.985 50.000 6.68 0.00 44.20 3.06
2769 3101 3.553904 ACTCCTACGTTCTATGGTCTCC 58.446 50.000 0.00 0.00 0.00 3.71
2782 3114 4.201685 CGAACCTTGCAAATTACTCCTACG 60.202 45.833 0.00 0.00 0.00 3.51
2795 3127 2.419620 TCGCTGTCGAACCTTGCA 59.580 55.556 0.00 0.00 42.44 4.08
2817 3149 7.177744 TCAAAAGTGGTTCTCAAAAAGGTTACT 59.822 33.333 0.00 0.00 0.00 2.24
3018 3350 7.013369 CCCCATTAAAAAGAGCTGTAGTAATCC 59.987 40.741 0.00 0.00 0.00 3.01
3068 3417 3.788672 CCAGCTAAGTGGGATCACC 57.211 57.895 0.00 0.00 44.64 4.02
3098 3454 3.652539 ATGGTTCCGGTACACGCGG 62.653 63.158 12.47 1.27 42.52 6.46
3113 3469 3.875727 CACTAGATTTGCAGGACAGATGG 59.124 47.826 0.00 0.00 0.00 3.51
3551 3912 1.018226 CCTCCACGCAGCTCTTGAAG 61.018 60.000 0.00 0.00 0.00 3.02
3650 4011 2.027653 CCAGTCTCCCTTGAAGGTTCTC 60.028 54.545 10.82 0.00 31.93 2.87
3653 4014 1.068121 CCCAGTCTCCCTTGAAGGTT 58.932 55.000 10.82 0.00 31.93 3.50
3692 4198 1.374125 CACCGCATCACAGTCGGAA 60.374 57.895 6.91 0.00 45.53 4.30
3788 4294 0.031857 TCATGGCGGTTTTGCTGTTG 59.968 50.000 0.00 0.00 34.52 3.33
3789 4295 0.314935 CTCATGGCGGTTTTGCTGTT 59.685 50.000 0.00 0.00 34.52 3.16
3790 4296 0.537143 TCTCATGGCGGTTTTGCTGT 60.537 50.000 0.00 0.00 34.52 4.40
3801 4307 4.240096 CAACAAATGACCTTTCTCATGGC 58.760 43.478 0.00 0.00 30.92 4.40
4076 4699 0.179018 GGAGTGCCAGGTTCTTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
4277 4900 2.986311 GAACCTGACGTTCTGCACA 58.014 52.632 0.00 0.00 46.33 4.57
4727 5433 2.062177 CCGACCAGGGTATCCGGTT 61.062 63.158 9.50 0.00 39.07 4.44
5208 5929 0.994995 CTGATTTCGTGCTCGTCCTG 59.005 55.000 8.17 0.00 38.33 3.86
5222 5943 2.354203 GGTTCAGGACTCGAAGCTGATT 60.354 50.000 0.00 0.00 37.77 2.57
5250 5971 0.035725 CTGTGCCAGAGCCAGAATGA 60.036 55.000 0.00 0.00 38.72 2.57
5268 5989 2.029828 CACTGCAGTTCGTCTTCTACCT 60.030 50.000 18.94 0.00 0.00 3.08
5553 6279 6.331061 GCAAAGATTCATGCTGATTTTCTCT 58.669 36.000 7.08 0.00 39.46 3.10
5558 6284 4.445452 ACGCAAAGATTCATGCTGATTT 57.555 36.364 11.22 0.00 40.39 2.17
5583 6309 4.531854 AGTCTCATCTAGCTCTTGTGCTA 58.468 43.478 0.00 4.65 43.74 3.49
5584 6310 3.364549 AGTCTCATCTAGCTCTTGTGCT 58.635 45.455 0.00 2.77 46.11 4.40
5612 6344 6.600882 AACAGATTTGCCAATTCTCATCTT 57.399 33.333 0.00 0.00 0.00 2.40
5613 6345 7.177216 TGTTAACAGATTTGCCAATTCTCATCT 59.823 33.333 3.59 0.00 0.00 2.90
5614 6346 7.315142 TGTTAACAGATTTGCCAATTCTCATC 58.685 34.615 3.59 0.00 0.00 2.92
5627 7096 7.112452 AGTCAGGCTTTTTGTTAACAGATTT 57.888 32.000 8.56 0.00 0.00 2.17
5644 7113 6.116126 ACTCTTATGGTTGAATAAGTCAGGC 58.884 40.000 4.39 0.00 39.91 4.85
5647 7116 9.431887 GTACAACTCTTATGGTTGAATAAGTCA 57.568 33.333 12.53 0.00 44.58 3.41
5676 7145 1.089920 CAACCAGCCTTTCATCCTCG 58.910 55.000 0.00 0.00 0.00 4.63
5677 7146 0.813821 GCAACCAGCCTTTCATCCTC 59.186 55.000 0.00 0.00 37.23 3.71
5683 7152 2.563427 GAGCGCAACCAGCCTTTC 59.437 61.111 11.47 0.00 41.38 2.62
5696 7165 5.547181 TTCCATATCAGTAGATACGAGCG 57.453 43.478 0.00 0.00 39.43 5.03
5712 7181 7.841956 TCAAAAGTGTTCAAACCTTTTCCATA 58.158 30.769 14.06 4.43 37.33 2.74
5716 7185 7.062255 CAGACTCAAAAGTGTTCAAACCTTTTC 59.938 37.037 14.06 7.78 37.33 2.29
5726 7195 6.566197 ATTCATCCAGACTCAAAAGTGTTC 57.434 37.500 0.00 0.00 35.28 3.18
5731 7200 9.784680 CTATTTCAATTCATCCAGACTCAAAAG 57.215 33.333 0.00 0.00 0.00 2.27
5732 7201 9.300681 ACTATTTCAATTCATCCAGACTCAAAA 57.699 29.630 0.00 0.00 0.00 2.44
5752 7221 8.070171 CGACAATCAAAACTGAACAGACTATTT 58.930 33.333 8.87 2.39 0.00 1.40
5755 7224 5.465390 CCGACAATCAAAACTGAACAGACTA 59.535 40.000 8.87 0.00 0.00 2.59
5760 7229 4.196193 AGTCCGACAATCAAAACTGAACA 58.804 39.130 0.40 0.00 0.00 3.18
5776 7245 3.243975 GGACAACTTTGAACCTAGTCCGA 60.244 47.826 0.00 0.00 35.29 4.55
5777 7246 3.064931 GGACAACTTTGAACCTAGTCCG 58.935 50.000 0.00 0.00 35.29 4.79
5874 7344 2.906691 AGATGCTCTAAGCGCTGAAT 57.093 45.000 12.58 0.00 46.26 2.57
5896 7366 4.688879 ACACTCATGCGTATTCGAGAAAAA 59.311 37.500 7.66 0.00 39.71 1.94
5897 7367 4.091365 CACACTCATGCGTATTCGAGAAAA 59.909 41.667 7.66 0.00 39.71 2.29
5898 7368 3.612423 CACACTCATGCGTATTCGAGAAA 59.388 43.478 7.66 0.00 39.71 2.52
5899 7369 3.179048 CACACTCATGCGTATTCGAGAA 58.821 45.455 7.66 0.00 39.71 2.87
5900 7370 2.797491 CACACTCATGCGTATTCGAGA 58.203 47.619 7.66 0.00 39.71 4.04
5901 7371 1.256376 GCACACTCATGCGTATTCGAG 59.744 52.381 0.00 0.23 39.71 4.04
5902 7372 1.277326 GCACACTCATGCGTATTCGA 58.723 50.000 0.00 0.00 39.71 3.71
5903 7373 3.786955 GCACACTCATGCGTATTCG 57.213 52.632 0.00 0.00 35.50 3.34
5929 7399 9.635284 TCTAATCCCCATCCTCTTCTTTAATAT 57.365 33.333 0.00 0.00 0.00 1.28
5930 7400 9.460413 TTCTAATCCCCATCCTCTTCTTTAATA 57.540 33.333 0.00 0.00 0.00 0.98
5931 7401 7.954539 TCTAATCCCCATCCTCTTCTTTAAT 57.045 36.000 0.00 0.00 0.00 1.40
5932 7402 7.627697 TCTTCTAATCCCCATCCTCTTCTTTAA 59.372 37.037 0.00 0.00 0.00 1.52
5933 7403 7.071321 GTCTTCTAATCCCCATCCTCTTCTTTA 59.929 40.741 0.00 0.00 0.00 1.85
5934 7404 5.973124 TCTTCTAATCCCCATCCTCTTCTTT 59.027 40.000 0.00 0.00 0.00 2.52
5935 7405 5.368230 GTCTTCTAATCCCCATCCTCTTCTT 59.632 44.000 0.00 0.00 0.00 2.52
5936 7406 4.904853 GTCTTCTAATCCCCATCCTCTTCT 59.095 45.833 0.00 0.00 0.00 2.85
5937 7407 4.041075 GGTCTTCTAATCCCCATCCTCTTC 59.959 50.000 0.00 0.00 0.00 2.87
5938 7408 3.977326 GGTCTTCTAATCCCCATCCTCTT 59.023 47.826 0.00 0.00 0.00 2.85
5939 7409 3.592865 GGTCTTCTAATCCCCATCCTCT 58.407 50.000 0.00 0.00 0.00 3.69
5940 7410 2.640332 GGGTCTTCTAATCCCCATCCTC 59.360 54.545 0.00 0.00 37.09 3.71
5941 7411 2.707554 GGGTCTTCTAATCCCCATCCT 58.292 52.381 0.00 0.00 37.09 3.24
5955 7425 0.396811 CTCCAACGTGAAGGGGTCTT 59.603 55.000 0.00 0.00 35.62 3.01
5956 7426 2.058675 CTCCAACGTGAAGGGGTCT 58.941 57.895 0.00 0.00 0.00 3.85
5957 7427 1.671379 GCTCCAACGTGAAGGGGTC 60.671 63.158 4.05 0.00 0.00 4.46
5958 7428 0.834687 TAGCTCCAACGTGAAGGGGT 60.835 55.000 0.00 0.00 0.00 4.95
5959 7429 0.391263 GTAGCTCCAACGTGAAGGGG 60.391 60.000 0.00 0.00 0.00 4.79
5960 7430 0.320374 TGTAGCTCCAACGTGAAGGG 59.680 55.000 0.00 0.00 0.00 3.95
5961 7431 2.163818 TTGTAGCTCCAACGTGAAGG 57.836 50.000 0.00 0.00 0.00 3.46
5962 7432 3.059597 CACTTTGTAGCTCCAACGTGAAG 60.060 47.826 19.82 4.73 43.44 3.02
5963 7433 2.869801 CACTTTGTAGCTCCAACGTGAA 59.130 45.455 19.82 0.00 43.44 3.18
5964 7434 2.101750 TCACTTTGTAGCTCCAACGTGA 59.898 45.455 22.15 22.15 45.59 4.35
5965 7435 2.479837 TCACTTTGTAGCTCCAACGTG 58.520 47.619 18.83 18.83 42.63 4.49
5966 7436 2.902705 TCACTTTGTAGCTCCAACGT 57.097 45.000 0.00 0.00 0.00 3.99
5967 7437 4.688879 TGTAATCACTTTGTAGCTCCAACG 59.311 41.667 0.00 0.00 0.00 4.10
5968 7438 6.743575 ATGTAATCACTTTGTAGCTCCAAC 57.256 37.500 0.00 0.00 0.00 3.77
5969 7439 7.620880 ACTATGTAATCACTTTGTAGCTCCAA 58.379 34.615 0.00 0.00 0.00 3.53
5970 7440 7.182817 ACTATGTAATCACTTTGTAGCTCCA 57.817 36.000 0.00 0.00 0.00 3.86
5971 7441 6.702282 GGACTATGTAATCACTTTGTAGCTCC 59.298 42.308 0.00 0.00 0.00 4.70
5972 7442 7.265673 TGGACTATGTAATCACTTTGTAGCTC 58.734 38.462 0.00 0.00 0.00 4.09
5973 7443 7.182817 TGGACTATGTAATCACTTTGTAGCT 57.817 36.000 0.00 0.00 0.00 3.32
5974 7444 7.549488 AGTTGGACTATGTAATCACTTTGTAGC 59.451 37.037 0.00 0.00 0.00 3.58
5975 7445 9.088512 GAGTTGGACTATGTAATCACTTTGTAG 57.911 37.037 0.00 0.00 0.00 2.74
5976 7446 8.038944 GGAGTTGGACTATGTAATCACTTTGTA 58.961 37.037 0.00 0.00 0.00 2.41
5977 7447 6.879458 GGAGTTGGACTATGTAATCACTTTGT 59.121 38.462 0.00 0.00 0.00 2.83
5978 7448 6.878923 TGGAGTTGGACTATGTAATCACTTTG 59.121 38.462 0.00 0.00 0.00 2.77
5979 7449 6.879458 GTGGAGTTGGACTATGTAATCACTTT 59.121 38.462 0.00 0.00 0.00 2.66
5980 7450 6.407202 GTGGAGTTGGACTATGTAATCACTT 58.593 40.000 0.00 0.00 0.00 3.16
5981 7451 5.104900 GGTGGAGTTGGACTATGTAATCACT 60.105 44.000 0.00 0.00 0.00 3.41
5982 7452 5.116882 GGTGGAGTTGGACTATGTAATCAC 58.883 45.833 0.00 0.00 0.00 3.06
5983 7453 4.163458 GGGTGGAGTTGGACTATGTAATCA 59.837 45.833 0.00 0.00 0.00 2.57
5984 7454 4.704965 GGGTGGAGTTGGACTATGTAATC 58.295 47.826 0.00 0.00 0.00 1.75
5985 7455 3.134081 CGGGTGGAGTTGGACTATGTAAT 59.866 47.826 0.00 0.00 0.00 1.89
5986 7456 2.498481 CGGGTGGAGTTGGACTATGTAA 59.502 50.000 0.00 0.00 0.00 2.41
5987 7457 2.104967 CGGGTGGAGTTGGACTATGTA 58.895 52.381 0.00 0.00 0.00 2.29
5988 7458 0.902531 CGGGTGGAGTTGGACTATGT 59.097 55.000 0.00 0.00 0.00 2.29
5989 7459 1.134788 GTCGGGTGGAGTTGGACTATG 60.135 57.143 0.00 0.00 0.00 2.23
5990 7460 1.192428 GTCGGGTGGAGTTGGACTAT 58.808 55.000 0.00 0.00 0.00 2.12
5991 7461 1.246056 CGTCGGGTGGAGTTGGACTA 61.246 60.000 0.00 0.00 0.00 2.59
5992 7462 2.571216 CGTCGGGTGGAGTTGGACT 61.571 63.158 0.00 0.00 0.00 3.85
5993 7463 2.048503 CGTCGGGTGGAGTTGGAC 60.049 66.667 0.00 0.00 0.00 4.02
5994 7464 3.998672 GCGTCGGGTGGAGTTGGA 61.999 66.667 0.00 0.00 0.00 3.53
5995 7465 2.162338 TAAGCGTCGGGTGGAGTTGG 62.162 60.000 0.00 0.00 0.00 3.77
5996 7466 0.736325 CTAAGCGTCGGGTGGAGTTG 60.736 60.000 0.00 0.00 0.00 3.16
5997 7467 0.896940 TCTAAGCGTCGGGTGGAGTT 60.897 55.000 0.00 0.00 0.00 3.01
5998 7468 1.303888 TCTAAGCGTCGGGTGGAGT 60.304 57.895 0.00 0.00 0.00 3.85
5999 7469 1.433879 CTCTAAGCGTCGGGTGGAG 59.566 63.158 0.00 0.00 0.00 3.86
6000 7470 2.707849 GCTCTAAGCGTCGGGTGGA 61.708 63.158 0.00 0.00 0.00 4.02
6001 7471 2.202756 GCTCTAAGCGTCGGGTGG 60.203 66.667 0.00 0.00 0.00 4.61
6002 7472 0.872021 GATGCTCTAAGCGTCGGGTG 60.872 60.000 5.48 0.00 45.95 4.61
6003 7473 1.437986 GATGCTCTAAGCGTCGGGT 59.562 57.895 5.48 0.00 45.95 5.28
6004 7474 4.327885 GATGCTCTAAGCGTCGGG 57.672 61.111 5.48 0.00 45.95 5.14
6008 7478 2.293122 CTGCTAGAGATGCTCTAAGCGT 59.707 50.000 5.75 0.00 46.26 5.07
6009 7479 2.551887 TCTGCTAGAGATGCTCTAAGCG 59.448 50.000 5.75 7.82 46.26 4.68
6010 7480 3.305335 GGTCTGCTAGAGATGCTCTAAGC 60.305 52.174 5.75 10.60 41.74 3.09
6011 7481 3.255642 GGGTCTGCTAGAGATGCTCTAAG 59.744 52.174 5.75 2.25 41.74 2.18
6012 7482 3.226777 GGGTCTGCTAGAGATGCTCTAA 58.773 50.000 5.75 0.00 41.74 2.10
6013 7483 2.489985 GGGGTCTGCTAGAGATGCTCTA 60.490 54.545 0.00 4.30 41.50 2.43
6014 7484 1.703411 GGGTCTGCTAGAGATGCTCT 58.297 55.000 0.00 2.22 43.83 4.09
6015 7485 0.678950 GGGGTCTGCTAGAGATGCTC 59.321 60.000 0.00 0.00 31.63 4.26
6016 7486 1.112315 CGGGGTCTGCTAGAGATGCT 61.112 60.000 0.00 0.00 31.63 3.79
6017 7487 1.365633 CGGGGTCTGCTAGAGATGC 59.634 63.158 0.00 0.00 31.63 3.91
6018 7488 1.365633 GCGGGGTCTGCTAGAGATG 59.634 63.158 0.00 0.00 31.63 2.90
6019 7489 0.470833 ATGCGGGGTCTGCTAGAGAT 60.471 55.000 0.00 0.00 31.63 2.75
6020 7490 1.075970 ATGCGGGGTCTGCTAGAGA 60.076 57.895 0.00 0.00 0.00 3.10
6021 7491 1.365633 GATGCGGGGTCTGCTAGAG 59.634 63.158 0.00 0.00 0.00 2.43
6022 7492 2.134287 GGATGCGGGGTCTGCTAGA 61.134 63.158 0.00 0.00 0.00 2.43
6023 7493 2.423446 GGATGCGGGGTCTGCTAG 59.577 66.667 0.30 0.00 0.00 3.42
6024 7494 3.161450 GGGATGCGGGGTCTGCTA 61.161 66.667 0.30 0.00 0.00 3.49
6051 7521 0.223513 CGAACTGCAAACGCGTTTTG 59.776 50.000 33.05 26.38 46.57 2.44
6052 7522 1.468340 GCGAACTGCAAACGCGTTTT 61.468 50.000 33.05 19.44 45.45 2.43
6053 7523 1.937362 GCGAACTGCAAACGCGTTT 60.937 52.632 30.36 30.36 45.45 3.60
6054 7524 2.351888 GCGAACTGCAAACGCGTT 60.352 55.556 20.79 20.79 45.45 4.84
6057 7527 2.975167 TTTCCGCGAACTGCAAACGC 62.975 55.000 8.23 17.60 46.97 4.84
6058 7528 0.590230 TTTTCCGCGAACTGCAAACG 60.590 50.000 8.23 0.00 46.97 3.60
6059 7529 1.254313 GTTTTTCCGCGAACTGCAAAC 59.746 47.619 8.23 4.18 46.97 2.93
6060 7530 1.551145 GTTTTTCCGCGAACTGCAAA 58.449 45.000 8.23 0.00 46.97 3.68
6061 7531 0.590230 CGTTTTTCCGCGAACTGCAA 60.590 50.000 8.23 0.00 46.97 4.08
6062 7532 1.010574 CGTTTTTCCGCGAACTGCA 60.011 52.632 8.23 0.00 46.97 4.41
6063 7533 1.724581 CCGTTTTTCCGCGAACTGC 60.725 57.895 8.23 0.00 41.47 4.40
6064 7534 0.028374 AACCGTTTTTCCGCGAACTG 59.972 50.000 8.23 2.67 0.00 3.16
6065 7535 0.734309 AAACCGTTTTTCCGCGAACT 59.266 45.000 8.23 0.00 0.00 3.01
6066 7536 1.253289 CAAAACCGTTTTTCCGCGAAC 59.747 47.619 8.23 2.38 32.27 3.95
6067 7537 1.546834 CAAAACCGTTTTTCCGCGAA 58.453 45.000 8.23 0.00 32.27 4.70
6068 7538 0.866483 GCAAAACCGTTTTTCCGCGA 60.866 50.000 8.23 0.00 32.27 5.87
6069 7539 1.140407 TGCAAAACCGTTTTTCCGCG 61.140 50.000 6.51 0.00 32.27 6.46
6070 7540 0.574922 CTGCAAAACCGTTTTTCCGC 59.425 50.000 6.51 8.26 32.27 5.54
6071 7541 1.204792 CCTGCAAAACCGTTTTTCCG 58.795 50.000 6.51 0.00 32.27 4.30
6072 7542 2.198406 GACCTGCAAAACCGTTTTTCC 58.802 47.619 6.51 2.49 32.27 3.13
6073 7543 1.849829 CGACCTGCAAAACCGTTTTTC 59.150 47.619 6.51 3.07 32.27 2.29
6074 7544 1.470112 CCGACCTGCAAAACCGTTTTT 60.470 47.619 6.51 0.00 35.15 1.94
6075 7545 0.101579 CCGACCTGCAAAACCGTTTT 59.898 50.000 3.29 3.29 0.00 2.43
6076 7546 1.731093 CCGACCTGCAAAACCGTTT 59.269 52.632 0.00 0.00 0.00 3.60
6077 7547 2.841160 GCCGACCTGCAAAACCGTT 61.841 57.895 0.00 0.00 0.00 4.44
6078 7548 3.284449 GCCGACCTGCAAAACCGT 61.284 61.111 0.00 0.00 0.00 4.83
6079 7549 4.383602 CGCCGACCTGCAAAACCG 62.384 66.667 0.00 0.00 0.00 4.44
6080 7550 4.700365 GCGCCGACCTGCAAAACC 62.700 66.667 0.00 0.00 0.00 3.27
6098 7568 4.803426 CTGCCTCTGCGACCGTCC 62.803 72.222 0.00 0.00 41.78 4.79
6099 7569 3.749064 TCTGCCTCTGCGACCGTC 61.749 66.667 0.00 0.00 41.78 4.79
6100 7570 4.057428 GTCTGCCTCTGCGACCGT 62.057 66.667 0.00 0.00 41.78 4.83
6101 7571 4.803426 GGTCTGCCTCTGCGACCG 62.803 72.222 10.93 0.00 44.80 4.79
6103 7573 3.386237 AGGGTCTGCCTCTGCGAC 61.386 66.667 0.00 0.00 41.78 5.19
6104 7574 3.385384 CAGGGTCTGCCTCTGCGA 61.385 66.667 0.00 0.00 41.78 5.10
6113 7583 1.515521 GGTCCGTTTTGCAGGGTCTG 61.516 60.000 0.00 0.00 34.12 3.51
6114 7584 1.228154 GGTCCGTTTTGCAGGGTCT 60.228 57.895 0.00 0.00 0.00 3.85
6115 7585 2.265904 GGGTCCGTTTTGCAGGGTC 61.266 63.158 0.00 0.00 0.00 4.46
6116 7586 2.203437 GGGTCCGTTTTGCAGGGT 60.203 61.111 0.00 0.00 0.00 4.34
6117 7587 3.361977 CGGGTCCGTTTTGCAGGG 61.362 66.667 0.55 0.00 34.35 4.45
6127 7597 4.860907 CGAATATCCTTTTATACGGGTCCG 59.139 45.833 7.97 7.97 46.03 4.79
6128 7598 4.628766 GCGAATATCCTTTTATACGGGTCC 59.371 45.833 0.00 0.00 0.00 4.46
6129 7599 4.325472 CGCGAATATCCTTTTATACGGGTC 59.675 45.833 0.00 0.00 0.00 4.46
6130 7600 4.240096 CGCGAATATCCTTTTATACGGGT 58.760 43.478 0.00 0.00 0.00 5.28
6131 7601 3.615496 CCGCGAATATCCTTTTATACGGG 59.385 47.826 8.23 0.00 33.49 5.28
6132 7602 4.487948 TCCGCGAATATCCTTTTATACGG 58.512 43.478 8.23 0.00 38.27 4.02
6133 7603 6.642683 ATTCCGCGAATATCCTTTTATACG 57.357 37.500 8.23 0.00 29.72 3.06
6134 7604 8.062448 GCATATTCCGCGAATATCCTTTTATAC 58.938 37.037 8.23 0.00 41.52 1.47
6135 7605 7.985184 AGCATATTCCGCGAATATCCTTTTATA 59.015 33.333 8.23 0.00 41.52 0.98
6136 7606 6.823689 AGCATATTCCGCGAATATCCTTTTAT 59.176 34.615 8.23 0.00 41.52 1.40
6137 7607 6.170506 AGCATATTCCGCGAATATCCTTTTA 58.829 36.000 8.23 0.00 41.52 1.52
6138 7608 5.003804 AGCATATTCCGCGAATATCCTTTT 58.996 37.500 8.23 0.00 41.52 2.27
6139 7609 4.579869 AGCATATTCCGCGAATATCCTTT 58.420 39.130 8.23 0.00 41.52 3.11
6140 7610 4.081420 AGAGCATATTCCGCGAATATCCTT 60.081 41.667 8.23 3.62 41.52 3.36
6141 7611 3.449018 AGAGCATATTCCGCGAATATCCT 59.551 43.478 8.23 10.75 41.52 3.24
6142 7612 3.786635 AGAGCATATTCCGCGAATATCC 58.213 45.455 8.23 5.93 41.52 2.59
6143 7613 5.786401 AAAGAGCATATTCCGCGAATATC 57.214 39.130 8.23 9.33 41.52 1.63
6144 7614 6.183360 CGTAAAAGAGCATATTCCGCGAATAT 60.183 38.462 8.23 12.37 43.42 1.28
6145 7615 5.118050 CGTAAAAGAGCATATTCCGCGAATA 59.882 40.000 8.23 10.48 38.61 1.75
6146 7616 4.084537 CGTAAAAGAGCATATTCCGCGAAT 60.085 41.667 8.23 8.38 36.20 3.34
6147 7617 3.244345 CGTAAAAGAGCATATTCCGCGAA 59.756 43.478 8.23 0.00 0.00 4.70
6148 7618 2.792674 CGTAAAAGAGCATATTCCGCGA 59.207 45.455 8.23 0.00 0.00 5.87
6149 7619 2.096909 CCGTAAAAGAGCATATTCCGCG 60.097 50.000 0.00 0.00 0.00 6.46
6150 7620 2.223377 CCCGTAAAAGAGCATATTCCGC 59.777 50.000 0.00 0.00 0.00 5.54
6151 7621 3.463944 ACCCGTAAAAGAGCATATTCCG 58.536 45.455 0.00 0.00 0.00 4.30
6152 7622 4.036380 CCAACCCGTAAAAGAGCATATTCC 59.964 45.833 0.00 0.00 0.00 3.01
6153 7623 4.638865 ACCAACCCGTAAAAGAGCATATTC 59.361 41.667 0.00 0.00 0.00 1.75
6154 7624 4.595986 ACCAACCCGTAAAAGAGCATATT 58.404 39.130 0.00 0.00 0.00 1.28
6155 7625 4.230745 ACCAACCCGTAAAAGAGCATAT 57.769 40.909 0.00 0.00 0.00 1.78
6156 7626 3.706600 ACCAACCCGTAAAAGAGCATA 57.293 42.857 0.00 0.00 0.00 3.14
6157 7627 2.579410 ACCAACCCGTAAAAGAGCAT 57.421 45.000 0.00 0.00 0.00 3.79
6158 7628 2.351706 AACCAACCCGTAAAAGAGCA 57.648 45.000 0.00 0.00 0.00 4.26
6159 7629 3.720949 AAAACCAACCCGTAAAAGAGC 57.279 42.857 0.00 0.00 0.00 4.09
6160 7630 4.517832 AGCTAAAACCAACCCGTAAAAGAG 59.482 41.667 0.00 0.00 0.00 2.85
6161 7631 4.276431 CAGCTAAAACCAACCCGTAAAAGA 59.724 41.667 0.00 0.00 0.00 2.52
6162 7632 4.542735 CAGCTAAAACCAACCCGTAAAAG 58.457 43.478 0.00 0.00 0.00 2.27
6163 7633 3.243468 GCAGCTAAAACCAACCCGTAAAA 60.243 43.478 0.00 0.00 0.00 1.52
6164 7634 2.293955 GCAGCTAAAACCAACCCGTAAA 59.706 45.455 0.00 0.00 0.00 2.01
6165 7635 1.881324 GCAGCTAAAACCAACCCGTAA 59.119 47.619 0.00 0.00 0.00 3.18
6166 7636 1.525941 GCAGCTAAAACCAACCCGTA 58.474 50.000 0.00 0.00 0.00 4.02
6167 7637 1.512156 CGCAGCTAAAACCAACCCGT 61.512 55.000 0.00 0.00 0.00 5.28
6168 7638 1.209127 CGCAGCTAAAACCAACCCG 59.791 57.895 0.00 0.00 0.00 5.28
6169 7639 1.584495 CCGCAGCTAAAACCAACCC 59.416 57.895 0.00 0.00 0.00 4.11
6170 7640 1.080772 GCCGCAGCTAAAACCAACC 60.081 57.895 0.00 0.00 35.50 3.77
6171 7641 0.387239 CTGCCGCAGCTAAAACCAAC 60.387 55.000 7.61 0.00 40.80 3.77
6172 7642 0.536233 TCTGCCGCAGCTAAAACCAA 60.536 50.000 15.98 0.00 40.80 3.67
6173 7643 0.536233 TTCTGCCGCAGCTAAAACCA 60.536 50.000 15.98 0.00 40.80 3.67
6174 7644 0.811281 ATTCTGCCGCAGCTAAAACC 59.189 50.000 15.98 0.00 40.80 3.27
6175 7645 2.936498 TCTATTCTGCCGCAGCTAAAAC 59.064 45.455 15.98 0.00 40.80 2.43
6176 7646 2.936498 GTCTATTCTGCCGCAGCTAAAA 59.064 45.455 15.98 5.11 40.80 1.52
6177 7647 2.550978 GTCTATTCTGCCGCAGCTAAA 58.449 47.619 15.98 5.49 40.80 1.85
6178 7648 1.202533 GGTCTATTCTGCCGCAGCTAA 60.203 52.381 15.98 6.24 40.80 3.09
6179 7649 0.389391 GGTCTATTCTGCCGCAGCTA 59.611 55.000 15.98 8.62 40.80 3.32
6180 7650 1.144936 GGTCTATTCTGCCGCAGCT 59.855 57.895 15.98 7.91 40.80 4.24
6181 7651 1.889573 GGGTCTATTCTGCCGCAGC 60.890 63.158 15.98 0.12 40.48 5.25
6182 7652 1.227674 GGGGTCTATTCTGCCGCAG 60.228 63.158 14.62 14.62 35.61 5.18
6183 7653 1.686325 GAGGGGTCTATTCTGCCGCA 61.686 60.000 0.00 0.00 37.64 5.69
6184 7654 1.069935 GAGGGGTCTATTCTGCCGC 59.930 63.158 0.00 0.00 35.74 6.53
6185 7655 0.830648 TTGAGGGGTCTATTCTGCCG 59.169 55.000 0.00 0.00 0.00 5.69
6186 7656 2.239907 AGTTTGAGGGGTCTATTCTGCC 59.760 50.000 0.00 0.00 0.00 4.85
6187 7657 3.636153 AGTTTGAGGGGTCTATTCTGC 57.364 47.619 0.00 0.00 0.00 4.26
6188 7658 5.586643 GCTTAAGTTTGAGGGGTCTATTCTG 59.413 44.000 4.02 0.00 0.00 3.02
6189 7659 5.489278 AGCTTAAGTTTGAGGGGTCTATTCT 59.511 40.000 4.02 0.00 0.00 2.40
6190 7660 5.586643 CAGCTTAAGTTTGAGGGGTCTATTC 59.413 44.000 4.02 0.00 0.00 1.75
6191 7661 5.014228 ACAGCTTAAGTTTGAGGGGTCTATT 59.986 40.000 13.74 0.00 0.00 1.73
6192 7662 4.536489 ACAGCTTAAGTTTGAGGGGTCTAT 59.464 41.667 13.74 0.00 0.00 1.98
6193 7663 3.908103 ACAGCTTAAGTTTGAGGGGTCTA 59.092 43.478 13.74 0.00 0.00 2.59
6194 7664 2.711547 ACAGCTTAAGTTTGAGGGGTCT 59.288 45.455 13.74 0.00 0.00 3.85
6195 7665 3.141767 ACAGCTTAAGTTTGAGGGGTC 57.858 47.619 13.74 0.00 0.00 4.46
6196 7666 4.717279 TTACAGCTTAAGTTTGAGGGGT 57.283 40.909 13.74 0.80 0.00 4.95
6197 7667 5.562113 CGTTTTACAGCTTAAGTTTGAGGGG 60.562 44.000 13.74 0.00 0.00 4.79
6198 7668 5.449304 CGTTTTACAGCTTAAGTTTGAGGG 58.551 41.667 13.74 0.00 0.00 4.30
6199 7669 5.237779 TCCGTTTTACAGCTTAAGTTTGAGG 59.762 40.000 13.74 3.64 0.00 3.86
6200 7670 6.295039 TCCGTTTTACAGCTTAAGTTTGAG 57.705 37.500 13.74 0.00 0.00 3.02
6201 7671 6.680874 TTCCGTTTTACAGCTTAAGTTTGA 57.319 33.333 13.74 0.00 0.00 2.69
6202 7672 9.620660 AATATTCCGTTTTACAGCTTAAGTTTG 57.379 29.630 4.02 6.01 0.00 2.93
6203 7673 9.836076 GAATATTCCGTTTTACAGCTTAAGTTT 57.164 29.630 3.92 0.00 0.00 2.66
6204 7674 8.173130 CGAATATTCCGTTTTACAGCTTAAGTT 58.827 33.333 9.87 0.00 0.00 2.66
6205 7675 7.675637 GCGAATATTCCGTTTTACAGCTTAAGT 60.676 37.037 9.87 0.00 0.00 2.24
6206 7676 6.627671 GCGAATATTCCGTTTTACAGCTTAAG 59.372 38.462 9.87 0.00 0.00 1.85
6207 7677 6.314400 AGCGAATATTCCGTTTTACAGCTTAA 59.686 34.615 9.87 0.00 0.00 1.85
6208 7678 5.813672 AGCGAATATTCCGTTTTACAGCTTA 59.186 36.000 9.87 0.00 0.00 3.09
6209 7679 4.634443 AGCGAATATTCCGTTTTACAGCTT 59.366 37.500 9.87 0.00 0.00 3.74
6210 7680 4.189231 AGCGAATATTCCGTTTTACAGCT 58.811 39.130 9.87 6.41 0.00 4.24
6211 7681 4.531659 AGCGAATATTCCGTTTTACAGC 57.468 40.909 9.87 4.27 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.