Multiple sequence alignment - TraesCS4D01G249600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G249600 chr4D 100.000 8879 0 0 1 8879 418586870 418577992 0.000000e+00 16397.0
1 TraesCS4D01G249600 chr4D 95.190 2848 96 23 3964 6781 464274425 464271589 0.000000e+00 4462.0
2 TraesCS4D01G249600 chr7D 96.359 4037 105 21 2768 6782 568338809 568334793 0.000000e+00 6602.0
3 TraesCS4D01G249600 chr7D 96.286 4039 105 20 2769 6781 568347026 568343007 0.000000e+00 6586.0
4 TraesCS4D01G249600 chr7D 95.847 1565 43 5 5230 6776 118168640 118170200 0.000000e+00 2510.0
5 TraesCS4D01G249600 chr7D 82.022 178 29 1 347 524 398813578 398813752 2.000000e-31 148.0
6 TraesCS4D01G249600 chr7D 72.673 505 116 16 266 757 531175009 531175504 2.000000e-31 148.0
7 TraesCS4D01G249600 chr7D 91.803 61 4 1 2403 2462 451191725 451191665 5.710000e-12 84.2
8 TraesCS4D01G249600 chr3D 96.236 4038 111 20 2768 6781 614344236 614348256 0.000000e+00 6577.0
9 TraesCS4D01G249600 chr3D 95.912 4036 107 21 2768 6781 614352454 614356453 0.000000e+00 6486.0
10 TraesCS4D01G249600 chr3D 95.157 2829 85 30 3989 6783 90891568 90888758 0.000000e+00 4418.0
11 TraesCS4D01G249600 chr3D 94.731 2847 104 24 3964 6781 518451864 518454693 0.000000e+00 4385.0
12 TraesCS4D01G249600 chr3D 92.019 2055 129 27 2768 4800 467187869 467189910 0.000000e+00 2854.0
13 TraesCS4D01G249600 chr3D 91.975 2056 126 33 2769 4800 415586439 415588479 0.000000e+00 2846.0
14 TraesCS4D01G249600 chr3D 95.015 1685 52 10 5120 6781 31371257 31372932 0.000000e+00 2617.0
15 TraesCS4D01G249600 chr2D 96.063 4039 110 23 2769 6781 73064074 73068089 0.000000e+00 6532.0
16 TraesCS4D01G249600 chr2D 74.163 418 84 16 348 755 641494095 641493692 1.540000e-32 152.0
17 TraesCS4D01G249600 chr6D 95.792 4064 100 32 2769 6781 115302958 115307001 0.000000e+00 6492.0
18 TraesCS4D01G249600 chr6D 78.804 184 39 0 348 531 43405709 43405892 3.370000e-24 124.0
19 TraesCS4D01G249600 chr1D 95.701 2838 65 18 3989 6781 140778505 140775680 0.000000e+00 4512.0
20 TraesCS4D01G249600 chr1D 95.741 2348 66 20 3964 6284 140761240 140758900 0.000000e+00 3751.0
21 TraesCS4D01G249600 chr1D 92.389 2365 144 31 3107 5449 244861046 244858696 0.000000e+00 3338.0
22 TraesCS4D01G249600 chr1D 91.980 2045 130 29 2768 4791 272744245 272746276 0.000000e+00 2837.0
23 TraesCS4D01G249600 chr4A 92.058 2128 108 20 6782 8879 46221400 46223496 0.000000e+00 2937.0
24 TraesCS4D01G249600 chr4A 95.624 1531 52 8 895 2416 46219577 46221101 0.000000e+00 2442.0
25 TraesCS4D01G249600 chr4A 73.913 414 92 10 347 752 740924466 740924871 1.540000e-32 152.0
26 TraesCS4D01G249600 chr4B 94.259 1829 79 11 6782 8606 515061930 515060124 0.000000e+00 2772.0
27 TraesCS4D01G249600 chr4B 96.172 1515 54 2 903 2416 515063741 515062230 0.000000e+00 2473.0
28 TraesCS4D01G249600 chr4B 89.457 313 25 7 2462 2768 515062236 515061926 1.080000e-103 388.0
29 TraesCS4D01G249600 chr4B 89.796 294 8 1 8608 8879 515060039 515059746 3.050000e-94 357.0
30 TraesCS4D01G249600 chr4B 75.594 463 101 8 265 718 72658843 72658384 1.500000e-52 219.0
31 TraesCS4D01G249600 chr7A 75.294 425 77 22 347 763 115862979 115862575 2.550000e-40 178.0
32 TraesCS4D01G249600 chr7A 83.000 100 11 4 658 757 628708155 628708062 1.590000e-12 86.1
33 TraesCS4D01G249600 chr3B 74.873 394 78 14 374 757 418459792 418460174 9.230000e-35 159.0
34 TraesCS4D01G249600 chr2A 77.637 237 46 4 297 531 619618137 619618368 4.320000e-28 137.0
35 TraesCS4D01G249600 chr2A 90.625 64 4 2 2407 2469 187954995 187954933 5.710000e-12 84.2
36 TraesCS4D01G249600 chr5D 94.915 59 2 1 2401 2459 482292753 482292696 3.410000e-14 91.6
37 TraesCS4D01G249600 chr5D 88.060 67 7 1 2397 2462 357878329 357878395 2.660000e-10 78.7
38 TraesCS4D01G249600 chr5B 94.915 59 2 1 2401 2459 591647607 591647550 3.410000e-14 91.6
39 TraesCS4D01G249600 chr1B 96.364 55 1 1 2404 2458 645568323 645568270 1.230000e-13 89.8
40 TraesCS4D01G249600 chr5A 93.220 59 3 1 2401 2459 601993284 601993227 1.590000e-12 86.1
41 TraesCS4D01G249600 chr7B 93.103 58 0 4 2407 2464 525000546 525000493 2.050000e-11 82.4
42 TraesCS4D01G249600 chr7B 75.833 120 25 4 592 709 731958164 731958281 3.460000e-04 58.4
43 TraesCS4D01G249600 chr7B 75.833 120 25 4 592 709 732083339 732083456 3.460000e-04 58.4
44 TraesCS4D01G249600 chr6A 89.231 65 3 4 2399 2462 601226008 601226069 2.660000e-10 78.7
45 TraesCS4D01G249600 chrUn 75.833 120 25 4 592 709 160380186 160380303 3.460000e-04 58.4
46 TraesCS4D01G249600 chrUn 75.833 120 25 4 592 709 260933371 260933488 3.460000e-04 58.4
47 TraesCS4D01G249600 chrUn 76.636 107 21 4 605 709 160316197 160316301 1.000000e-03 56.5
48 TraesCS4D01G249600 chrUn 76.636 107 21 4 605 709 361667520 361667416 1.000000e-03 56.5
49 TraesCS4D01G249600 chrUn 83.051 59 10 0 651 709 300936689 300936631 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G249600 chr4D 418577992 418586870 8878 True 16397.0 16397 100.000 1 8879 1 chr4D.!!$R1 8878
1 TraesCS4D01G249600 chr4D 464271589 464274425 2836 True 4462.0 4462 95.190 3964 6781 1 chr4D.!!$R2 2817
2 TraesCS4D01G249600 chr7D 568334793 568338809 4016 True 6602.0 6602 96.359 2768 6782 1 chr7D.!!$R2 4014
3 TraesCS4D01G249600 chr7D 568343007 568347026 4019 True 6586.0 6586 96.286 2769 6781 1 chr7D.!!$R3 4012
4 TraesCS4D01G249600 chr7D 118168640 118170200 1560 False 2510.0 2510 95.847 5230 6776 1 chr7D.!!$F1 1546
5 TraesCS4D01G249600 chr3D 614344236 614348256 4020 False 6577.0 6577 96.236 2768 6781 1 chr3D.!!$F5 4013
6 TraesCS4D01G249600 chr3D 614352454 614356453 3999 False 6486.0 6486 95.912 2768 6781 1 chr3D.!!$F6 4013
7 TraesCS4D01G249600 chr3D 90888758 90891568 2810 True 4418.0 4418 95.157 3989 6783 1 chr3D.!!$R1 2794
8 TraesCS4D01G249600 chr3D 518451864 518454693 2829 False 4385.0 4385 94.731 3964 6781 1 chr3D.!!$F4 2817
9 TraesCS4D01G249600 chr3D 467187869 467189910 2041 False 2854.0 2854 92.019 2768 4800 1 chr3D.!!$F3 2032
10 TraesCS4D01G249600 chr3D 415586439 415588479 2040 False 2846.0 2846 91.975 2769 4800 1 chr3D.!!$F2 2031
11 TraesCS4D01G249600 chr3D 31371257 31372932 1675 False 2617.0 2617 95.015 5120 6781 1 chr3D.!!$F1 1661
12 TraesCS4D01G249600 chr2D 73064074 73068089 4015 False 6532.0 6532 96.063 2769 6781 1 chr2D.!!$F1 4012
13 TraesCS4D01G249600 chr6D 115302958 115307001 4043 False 6492.0 6492 95.792 2769 6781 1 chr6D.!!$F2 4012
14 TraesCS4D01G249600 chr1D 140775680 140778505 2825 True 4512.0 4512 95.701 3989 6781 1 chr1D.!!$R2 2792
15 TraesCS4D01G249600 chr1D 140758900 140761240 2340 True 3751.0 3751 95.741 3964 6284 1 chr1D.!!$R1 2320
16 TraesCS4D01G249600 chr1D 244858696 244861046 2350 True 3338.0 3338 92.389 3107 5449 1 chr1D.!!$R3 2342
17 TraesCS4D01G249600 chr1D 272744245 272746276 2031 False 2837.0 2837 91.980 2768 4791 1 chr1D.!!$F1 2023
18 TraesCS4D01G249600 chr4A 46219577 46223496 3919 False 2689.5 2937 93.841 895 8879 2 chr4A.!!$F2 7984
19 TraesCS4D01G249600 chr4B 515059746 515063741 3995 True 1497.5 2772 92.421 903 8879 4 chr4B.!!$R2 7976

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
828 829 0.030908 CATAGACCGGTCTCGCCTTC 59.969 60.000 39.49 9.18 40.93 3.46 F
2359 2366 0.107214 GGCCTGGATTCATCGGTCAA 60.107 55.000 0.00 0.00 0.00 3.18 F
3456 3475 0.107214 CACCGGGTTGTATCTGGCAT 60.107 55.000 6.32 0.00 34.06 4.40 F
3861 3881 0.172578 CTTCGGCTGATACCACGACA 59.827 55.000 0.00 0.00 34.82 4.35 F
4847 4904 1.741770 GTGGGGATGACGTCAGCAC 60.742 63.158 32.33 30.01 34.37 4.40 F
5786 5886 0.891904 GCCAAAGGGAGTAAACGGCA 60.892 55.000 0.00 0.00 37.98 5.69 F
6134 6248 1.258445 GGGTTTGGGCGAGAGAGAGA 61.258 60.000 0.00 0.00 0.00 3.10 F
7246 7405 0.768221 AGACCCTCCAGCTTGACCAA 60.768 55.000 0.00 0.00 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2613 2622 0.514255 CAGCAATGCCGACGGATATG 59.486 55.000 20.5 13.14 0.00 1.78 R
3922 3942 5.869888 ACGAGTTCTTGGTATTTGATCTGAC 59.130 40.000 0.0 0.00 0.00 3.51 R
4847 4904 0.315251 TGGTCAGCGAGTCTGTTGAG 59.685 55.000 0.0 0.00 43.32 3.02 R
5786 5886 0.688087 CCTCCTAGCCCTCTTCCGTT 60.688 60.000 0.0 0.00 0.00 4.44 R
6718 6872 1.064505 GATGCCACGTCACCATGATTG 59.935 52.381 0.0 0.00 0.00 2.67 R
6825 6979 1.075374 TCCTGTGGAAACAAGGATGGG 59.925 52.381 0.0 0.00 46.06 4.00 R
7806 7972 1.676615 GCATTCCCACCAGGCAAAATG 60.677 52.381 0.0 0.00 33.99 2.32 R
8499 8665 2.357637 CCCAAAACAGACTTCTTTCGCA 59.642 45.455 0.0 0.00 0.00 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.715749 ATGACGGCATCCTGATCAAA 57.284 45.000 0.00 0.00 0.00 2.69
20 21 2.715749 TGACGGCATCCTGATCAAAT 57.284 45.000 0.00 0.00 0.00 2.32
21 22 2.291365 TGACGGCATCCTGATCAAATG 58.709 47.619 11.63 11.63 0.00 2.32
22 23 1.002033 GACGGCATCCTGATCAAATGC 60.002 52.381 24.58 24.58 43.95 3.56
23 24 1.315690 CGGCATCCTGATCAAATGCT 58.684 50.000 28.33 1.22 44.09 3.79
25 26 2.225019 CGGCATCCTGATCAAATGCTAC 59.775 50.000 28.33 18.28 44.09 3.58
26 27 2.225019 GGCATCCTGATCAAATGCTACG 59.775 50.000 28.33 5.32 44.09 3.51
27 28 2.874701 GCATCCTGATCAAATGCTACGT 59.125 45.455 25.01 0.00 41.95 3.57
28 29 3.059325 GCATCCTGATCAAATGCTACGTC 60.059 47.826 25.01 5.67 41.95 4.34
29 30 3.885724 TCCTGATCAAATGCTACGTCA 57.114 42.857 0.00 0.00 0.00 4.35
30 31 4.200838 TCCTGATCAAATGCTACGTCAA 57.799 40.909 0.00 0.00 0.00 3.18
31 32 4.183865 TCCTGATCAAATGCTACGTCAAG 58.816 43.478 0.00 0.00 0.00 3.02
32 33 3.310774 CCTGATCAAATGCTACGTCAAGG 59.689 47.826 0.00 0.00 0.00 3.61
33 34 3.270027 TGATCAAATGCTACGTCAAGGG 58.730 45.455 0.00 0.00 0.00 3.95
34 35 2.107950 TCAAATGCTACGTCAAGGGG 57.892 50.000 0.00 0.00 0.00 4.79
35 36 1.094785 CAAATGCTACGTCAAGGGGG 58.905 55.000 0.00 0.00 0.00 5.40
36 37 0.988832 AAATGCTACGTCAAGGGGGA 59.011 50.000 0.00 0.00 0.00 4.81
37 38 0.541863 AATGCTACGTCAAGGGGGAG 59.458 55.000 0.00 0.00 0.00 4.30
38 39 1.338136 ATGCTACGTCAAGGGGGAGG 61.338 60.000 0.00 0.00 0.00 4.30
39 40 1.684734 GCTACGTCAAGGGGGAGGA 60.685 63.158 0.00 0.00 0.00 3.71
40 41 1.677637 GCTACGTCAAGGGGGAGGAG 61.678 65.000 0.00 0.00 0.00 3.69
41 42 1.677637 CTACGTCAAGGGGGAGGAGC 61.678 65.000 0.00 0.00 0.00 4.70
42 43 3.787001 CGTCAAGGGGGAGGAGCC 61.787 72.222 0.00 0.00 0.00 4.70
43 44 3.787001 GTCAAGGGGGAGGAGCCG 61.787 72.222 0.00 0.00 37.63 5.52
73 74 4.814294 AACCGCGGCGTCCAGATC 62.814 66.667 28.58 0.00 0.00 2.75
85 86 4.794439 CAGATCGGCCGCGTGTGA 62.794 66.667 23.51 1.11 0.00 3.58
86 87 4.063967 AGATCGGCCGCGTGTGAA 62.064 61.111 23.51 0.16 0.00 3.18
87 88 3.554692 GATCGGCCGCGTGTGAAG 61.555 66.667 23.51 0.00 0.00 3.02
92 93 4.373116 GCCGCGTGTGAAGGAGGA 62.373 66.667 4.92 0.00 0.00 3.71
93 94 2.125912 CCGCGTGTGAAGGAGGAG 60.126 66.667 4.92 0.00 0.00 3.69
94 95 2.811317 CGCGTGTGAAGGAGGAGC 60.811 66.667 0.00 0.00 0.00 4.70
95 96 2.435059 GCGTGTGAAGGAGGAGCC 60.435 66.667 0.00 0.00 0.00 4.70
96 97 2.266055 CGTGTGAAGGAGGAGCCC 59.734 66.667 0.00 0.00 37.37 5.19
97 98 2.266055 GTGTGAAGGAGGAGCCCG 59.734 66.667 0.00 0.00 37.37 6.13
98 99 2.203788 TGTGAAGGAGGAGCCCGT 60.204 61.111 0.00 0.00 37.37 5.28
99 100 2.266055 GTGAAGGAGGAGCCCGTG 59.734 66.667 0.00 0.00 37.37 4.94
100 101 2.203788 TGAAGGAGGAGCCCGTGT 60.204 61.111 0.00 0.00 37.37 4.49
101 102 2.283529 TGAAGGAGGAGCCCGTGTC 61.284 63.158 0.00 0.00 37.37 3.67
102 103 3.003763 AAGGAGGAGCCCGTGTCC 61.004 66.667 0.00 0.00 37.37 4.02
126 127 4.690719 CCCGCCGCACAACCACTA 62.691 66.667 0.00 0.00 0.00 2.74
127 128 3.419759 CCGCCGCACAACCACTAC 61.420 66.667 0.00 0.00 0.00 2.73
128 129 3.773630 CGCCGCACAACCACTACG 61.774 66.667 0.00 0.00 0.00 3.51
129 130 4.084888 GCCGCACAACCACTACGC 62.085 66.667 0.00 0.00 0.00 4.42
130 131 3.419759 CCGCACAACCACTACGCC 61.420 66.667 0.00 0.00 0.00 5.68
131 132 3.419759 CGCACAACCACTACGCCC 61.420 66.667 0.00 0.00 0.00 6.13
132 133 2.281208 GCACAACCACTACGCCCA 60.281 61.111 0.00 0.00 0.00 5.36
133 134 1.674322 GCACAACCACTACGCCCAT 60.674 57.895 0.00 0.00 0.00 4.00
134 135 0.391927 GCACAACCACTACGCCCATA 60.392 55.000 0.00 0.00 0.00 2.74
135 136 1.745827 GCACAACCACTACGCCCATAT 60.746 52.381 0.00 0.00 0.00 1.78
136 137 2.210116 CACAACCACTACGCCCATATC 58.790 52.381 0.00 0.00 0.00 1.63
137 138 1.202486 ACAACCACTACGCCCATATCG 60.202 52.381 0.00 0.00 0.00 2.92
138 139 1.067974 CAACCACTACGCCCATATCGA 59.932 52.381 0.00 0.00 0.00 3.59
139 140 1.629043 ACCACTACGCCCATATCGAT 58.371 50.000 2.16 2.16 0.00 3.59
140 141 1.272490 ACCACTACGCCCATATCGATG 59.728 52.381 8.54 0.00 0.00 3.84
149 150 3.149899 CATATCGATGGGCCTGCTC 57.850 57.895 8.54 0.00 0.00 4.26
150 151 0.738762 CATATCGATGGGCCTGCTCG 60.739 60.000 8.54 11.11 0.00 5.03
151 152 2.513026 ATATCGATGGGCCTGCTCGC 62.513 60.000 8.54 0.00 32.62 5.03
170 171 3.420397 CGTCCCTCGGAAGTTCTTC 57.580 57.895 2.25 4.19 31.38 2.87
171 172 0.601558 CGTCCCTCGGAAGTTCTTCA 59.398 55.000 13.44 0.00 31.38 3.02
172 173 1.000506 CGTCCCTCGGAAGTTCTTCAA 59.999 52.381 13.44 1.93 31.38 2.69
173 174 2.689646 GTCCCTCGGAAGTTCTTCAAG 58.310 52.381 13.44 9.87 31.38 3.02
174 175 1.623811 TCCCTCGGAAGTTCTTCAAGG 59.376 52.381 18.26 18.26 0.00 3.61
175 176 1.623811 CCCTCGGAAGTTCTTCAAGGA 59.376 52.381 23.00 13.31 31.05 3.36
176 177 2.613223 CCCTCGGAAGTTCTTCAAGGAC 60.613 54.545 23.00 0.00 31.05 3.85
177 178 2.329379 CTCGGAAGTTCTTCAAGGACG 58.671 52.381 13.44 7.94 0.00 4.79
178 179 1.958579 TCGGAAGTTCTTCAAGGACGA 59.041 47.619 13.44 9.78 0.00 4.20
179 180 2.030185 TCGGAAGTTCTTCAAGGACGAG 60.030 50.000 13.44 0.00 0.00 4.18
180 181 2.070028 GGAAGTTCTTCAAGGACGAGC 58.930 52.381 13.44 0.00 0.00 5.03
181 182 2.289133 GGAAGTTCTTCAAGGACGAGCT 60.289 50.000 13.44 0.00 0.00 4.09
182 183 3.056749 GGAAGTTCTTCAAGGACGAGCTA 60.057 47.826 13.44 0.00 0.00 3.32
183 184 3.579335 AGTTCTTCAAGGACGAGCTAC 57.421 47.619 0.00 0.00 0.00 3.58
184 185 2.231721 AGTTCTTCAAGGACGAGCTACC 59.768 50.000 0.00 0.00 0.00 3.18
185 186 1.919240 TCTTCAAGGACGAGCTACCA 58.081 50.000 6.80 0.00 0.00 3.25
186 187 1.544691 TCTTCAAGGACGAGCTACCAC 59.455 52.381 6.80 0.00 0.00 4.16
187 188 1.546476 CTTCAAGGACGAGCTACCACT 59.454 52.381 6.80 0.00 0.00 4.00
188 189 1.174783 TCAAGGACGAGCTACCACTC 58.825 55.000 6.80 0.00 0.00 3.51
194 195 4.074454 GAGCTACCACTCGCGTTC 57.926 61.111 5.77 0.00 0.00 3.95
195 196 1.211969 GAGCTACCACTCGCGTTCA 59.788 57.895 5.77 0.00 0.00 3.18
196 197 1.071567 GAGCTACCACTCGCGTTCAC 61.072 60.000 5.77 0.00 0.00 3.18
197 198 2.092882 GCTACCACTCGCGTTCACC 61.093 63.158 5.77 0.00 0.00 4.02
198 199 1.287815 CTACCACTCGCGTTCACCA 59.712 57.895 5.77 0.00 0.00 4.17
199 200 0.319211 CTACCACTCGCGTTCACCAA 60.319 55.000 5.77 0.00 0.00 3.67
200 201 0.319211 TACCACTCGCGTTCACCAAG 60.319 55.000 5.77 0.00 0.00 3.61
201 202 2.317609 CCACTCGCGTTCACCAAGG 61.318 63.158 5.77 0.00 0.00 3.61
202 203 2.665185 ACTCGCGTTCACCAAGGC 60.665 61.111 5.77 0.00 39.57 4.35
207 208 3.777925 CGTTCACCAAGGCGCGAG 61.778 66.667 12.10 0.00 0.00 5.03
208 209 3.423154 GTTCACCAAGGCGCGAGG 61.423 66.667 12.10 8.17 0.00 4.63
222 223 3.318191 GAGGCTGCATCCTCCACT 58.682 61.111 23.50 0.00 45.40 4.00
223 224 2.521103 GAGGCTGCATCCTCCACTA 58.479 57.895 23.50 0.00 45.40 2.74
224 225 0.105778 GAGGCTGCATCCTCCACTAC 59.894 60.000 23.50 0.16 45.40 2.73
225 226 1.147153 GGCTGCATCCTCCACTACC 59.853 63.158 0.50 0.00 0.00 3.18
226 227 1.341156 GGCTGCATCCTCCACTACCT 61.341 60.000 0.50 0.00 0.00 3.08
227 228 0.543749 GCTGCATCCTCCACTACCTT 59.456 55.000 0.00 0.00 0.00 3.50
228 229 1.745141 GCTGCATCCTCCACTACCTTG 60.745 57.143 0.00 0.00 0.00 3.61
229 230 0.911769 TGCATCCTCCACTACCTTGG 59.088 55.000 0.00 0.00 38.10 3.61
230 231 1.204146 GCATCCTCCACTACCTTGGA 58.796 55.000 0.00 0.00 43.83 3.53
241 242 2.034687 CCTTGGAGGTGGCAGTGG 59.965 66.667 0.00 0.00 0.00 4.00
242 243 2.674380 CTTGGAGGTGGCAGTGGC 60.674 66.667 10.30 10.30 40.13 5.01
243 244 3.496309 CTTGGAGGTGGCAGTGGCA 62.496 63.158 16.56 16.56 43.71 4.92
244 245 2.981914 CTTGGAGGTGGCAGTGGCAA 62.982 60.000 22.39 1.86 43.71 4.52
245 246 2.985847 GGAGGTGGCAGTGGCAAC 60.986 66.667 26.37 26.37 46.54 4.17
258 259 4.280019 GCAACAGTCCCCCGGGTT 62.280 66.667 21.85 2.14 36.47 4.11
259 260 2.033602 CAACAGTCCCCCGGGTTC 59.966 66.667 21.85 9.27 36.47 3.62
260 261 3.633116 AACAGTCCCCCGGGTTCG 61.633 66.667 21.85 6.42 36.47 3.95
261 262 4.626402 ACAGTCCCCCGGGTTCGA 62.626 66.667 21.85 9.06 39.00 3.71
262 263 3.771160 CAGTCCCCCGGGTTCGAG 61.771 72.222 21.85 2.65 39.00 4.04
299 300 3.275088 TCGTGTTCGAGGAGGAGC 58.725 61.111 0.00 0.00 41.35 4.70
300 301 2.202492 CGTGTTCGAGGAGGAGCG 60.202 66.667 0.00 0.00 39.71 5.03
301 302 2.182030 GTGTTCGAGGAGGAGCGG 59.818 66.667 0.00 0.00 0.00 5.52
302 303 2.035155 TGTTCGAGGAGGAGCGGA 59.965 61.111 0.00 0.00 0.00 5.54
303 304 2.341101 TGTTCGAGGAGGAGCGGAC 61.341 63.158 0.00 0.00 36.57 4.79
304 305 3.132139 TTCGAGGAGGAGCGGACG 61.132 66.667 0.00 0.00 0.00 4.79
317 318 3.423154 GGACGGCGAGGCAACAAG 61.423 66.667 16.62 0.00 41.41 3.16
318 319 4.090057 GACGGCGAGGCAACAAGC 62.090 66.667 16.62 0.00 44.65 4.01
327 328 3.240203 GCAACAAGCACGCTACGA 58.760 55.556 0.00 0.00 44.79 3.43
328 329 1.130613 GCAACAAGCACGCTACGAG 59.869 57.895 0.00 0.00 44.79 4.18
329 330 1.130613 CAACAAGCACGCTACGAGC 59.869 57.895 1.06 1.06 43.14 5.03
366 367 2.879462 CTCCGCGTACGCCAAGTC 60.879 66.667 32.64 6.45 38.22 3.01
367 368 4.764336 TCCGCGTACGCCAAGTCG 62.764 66.667 32.64 17.99 38.22 4.18
369 370 4.764336 CGCGTACGCCAAGTCGGA 62.764 66.667 32.64 0.00 36.56 4.55
370 371 3.177249 GCGTACGCCAAGTCGGAC 61.177 66.667 29.51 0.00 39.78 4.79
372 373 3.177249 GTACGCCAAGTCGGACGC 61.177 66.667 1.89 0.00 37.68 5.19
395 396 3.903282 CGGAATGGGCCCGCAATG 61.903 66.667 19.37 2.53 40.54 2.82
396 397 2.441901 GGAATGGGCCCGCAATGA 60.442 61.111 19.37 0.00 0.00 2.57
397 398 2.785425 GGAATGGGCCCGCAATGAC 61.785 63.158 19.37 3.83 0.00 3.06
398 399 2.759560 AATGGGCCCGCAATGACC 60.760 61.111 19.37 0.00 0.00 4.02
399 400 4.839706 ATGGGCCCGCAATGACCC 62.840 66.667 19.37 0.00 43.14 4.46
402 403 4.424711 GGCCCGCAATGACCCAGA 62.425 66.667 0.00 0.00 0.00 3.86
403 404 3.134127 GCCCGCAATGACCCAGAC 61.134 66.667 0.00 0.00 0.00 3.51
404 405 2.438434 CCCGCAATGACCCAGACC 60.438 66.667 0.00 0.00 0.00 3.85
405 406 2.671070 CCGCAATGACCCAGACCT 59.329 61.111 0.00 0.00 0.00 3.85
406 407 1.746615 CCGCAATGACCCAGACCTG 60.747 63.158 0.00 0.00 0.00 4.00
442 443 2.856089 CGACCGCTTCGTCACTATC 58.144 57.895 0.00 0.00 43.24 2.08
443 444 0.924363 CGACCGCTTCGTCACTATCG 60.924 60.000 0.00 0.00 43.24 2.92
444 445 1.201098 GACCGCTTCGTCACTATCGC 61.201 60.000 0.00 0.00 32.74 4.58
445 446 2.286559 CCGCTTCGTCACTATCGCG 61.287 63.158 0.00 0.00 40.22 5.87
446 447 2.286559 CGCTTCGTCACTATCGCGG 61.287 63.158 6.13 0.00 37.25 6.46
447 448 1.063649 GCTTCGTCACTATCGCGGA 59.936 57.895 6.13 0.00 0.00 5.54
448 449 0.930742 GCTTCGTCACTATCGCGGAG 60.931 60.000 6.13 6.85 34.61 4.63
449 450 0.656259 CTTCGTCACTATCGCGGAGA 59.344 55.000 6.13 0.00 33.39 3.71
450 451 1.264557 CTTCGTCACTATCGCGGAGAT 59.735 52.381 6.13 0.00 43.19 2.75
451 452 0.586802 TCGTCACTATCGCGGAGATG 59.413 55.000 6.13 0.00 40.40 2.90
452 453 0.386100 CGTCACTATCGCGGAGATGG 60.386 60.000 6.13 4.00 42.73 3.51
453 454 0.664767 GTCACTATCGCGGAGATGGC 60.665 60.000 6.13 0.00 41.00 4.40
454 455 1.373497 CACTATCGCGGAGATGGCC 60.373 63.158 6.13 0.00 41.00 5.36
481 482 4.520846 CGCCGATGCCGCTTTGAC 62.521 66.667 0.00 0.00 0.00 3.18
482 483 3.430862 GCCGATGCCGCTTTGACA 61.431 61.111 0.00 0.00 0.00 3.58
483 484 2.787249 CCGATGCCGCTTTGACAG 59.213 61.111 0.00 0.00 0.00 3.51
484 485 2.034879 CCGATGCCGCTTTGACAGT 61.035 57.895 0.00 0.00 0.00 3.55
485 486 1.133253 CGATGCCGCTTTGACAGTG 59.867 57.895 0.00 0.00 0.00 3.66
486 487 1.291184 CGATGCCGCTTTGACAGTGA 61.291 55.000 0.00 0.00 34.56 3.41
487 488 0.445436 GATGCCGCTTTGACAGTGAG 59.555 55.000 0.00 0.00 34.56 3.51
488 489 1.580845 ATGCCGCTTTGACAGTGAGC 61.581 55.000 0.00 0.00 34.56 4.26
489 490 1.963338 GCCGCTTTGACAGTGAGCT 60.963 57.895 0.00 0.00 34.56 4.09
490 491 1.905922 GCCGCTTTGACAGTGAGCTC 61.906 60.000 6.82 6.82 34.56 4.09
491 492 1.621301 CCGCTTTGACAGTGAGCTCG 61.621 60.000 9.64 0.00 34.56 5.03
492 493 1.495069 GCTTTGACAGTGAGCTCGC 59.505 57.895 19.76 19.76 33.72 5.03
493 494 1.905922 GCTTTGACAGTGAGCTCGCC 61.906 60.000 23.37 9.37 33.72 5.54
494 495 0.320247 CTTTGACAGTGAGCTCGCCT 60.320 55.000 23.37 11.66 0.00 5.52
495 496 0.966179 TTTGACAGTGAGCTCGCCTA 59.034 50.000 23.37 5.05 0.00 3.93
496 497 0.528017 TTGACAGTGAGCTCGCCTAG 59.472 55.000 23.37 15.71 0.00 3.02
497 498 0.322546 TGACAGTGAGCTCGCCTAGA 60.323 55.000 23.37 3.18 0.00 2.43
498 499 1.028905 GACAGTGAGCTCGCCTAGAT 58.971 55.000 23.37 1.57 0.00 1.98
499 500 1.001815 GACAGTGAGCTCGCCTAGATC 60.002 57.143 23.37 10.28 41.21 2.75
500 501 0.040514 CAGTGAGCTCGCCTAGATCG 60.041 60.000 23.37 0.47 43.90 3.69
501 502 1.169661 AGTGAGCTCGCCTAGATCGG 61.170 60.000 23.37 0.00 43.90 4.18
502 503 2.257067 GAGCTCGCCTAGATCGGC 59.743 66.667 0.00 1.72 46.68 5.54
508 509 2.958576 GCCTAGATCGGCGAGGAG 59.041 66.667 17.22 11.84 41.52 3.69
509 510 1.899534 GCCTAGATCGGCGAGGAGT 60.900 63.158 17.22 0.00 41.52 3.85
510 511 1.953017 CCTAGATCGGCGAGGAGTG 59.047 63.158 17.22 4.29 41.52 3.51
511 512 1.519751 CCTAGATCGGCGAGGAGTGG 61.520 65.000 17.22 9.85 41.52 4.00
512 513 0.820074 CTAGATCGGCGAGGAGTGGT 60.820 60.000 17.22 0.00 0.00 4.16
513 514 0.818445 TAGATCGGCGAGGAGTGGTC 60.818 60.000 17.22 5.98 0.00 4.02
514 515 3.471244 GATCGGCGAGGAGTGGTCG 62.471 68.421 17.22 0.00 40.50 4.79
520 521 1.226717 CGAGGAGTGGTCGCTTAGC 60.227 63.158 0.00 0.00 0.00 3.09
531 532 2.202756 GCTTAGCGACACCTCCGG 60.203 66.667 0.00 0.00 0.00 5.14
532 533 3.003113 GCTTAGCGACACCTCCGGT 62.003 63.158 0.00 0.00 40.93 5.28
533 534 1.660560 GCTTAGCGACACCTCCGGTA 61.661 60.000 0.00 0.00 38.72 4.02
534 535 0.813184 CTTAGCGACACCTCCGGTAA 59.187 55.000 0.00 0.00 44.32 2.85
535 536 0.527565 TTAGCGACACCTCCGGTAAC 59.472 55.000 0.00 0.00 42.54 2.50
536 537 0.608856 TAGCGACACCTCCGGTAACA 60.609 55.000 0.00 0.00 37.11 2.41
537 538 1.005867 GCGACACCTCCGGTAACAA 60.006 57.895 0.00 0.00 32.11 2.83
538 539 1.012486 GCGACACCTCCGGTAACAAG 61.012 60.000 0.00 0.00 32.11 3.16
539 540 0.389426 CGACACCTCCGGTAACAAGG 60.389 60.000 0.00 2.28 43.27 3.61
540 541 0.036671 GACACCTCCGGTAACAAGGG 60.037 60.000 10.67 2.83 42.21 3.95
541 542 1.376812 CACCTCCGGTAACAAGGGC 60.377 63.158 10.67 0.00 42.21 5.19
542 543 1.844289 ACCTCCGGTAACAAGGGCA 60.844 57.895 10.67 0.00 42.21 5.36
543 544 1.377229 CCTCCGGTAACAAGGGCAA 59.623 57.895 0.00 0.00 35.90 4.52
544 545 0.250989 CCTCCGGTAACAAGGGCAAA 60.251 55.000 0.00 0.00 35.90 3.68
545 546 1.165270 CTCCGGTAACAAGGGCAAAG 58.835 55.000 0.00 0.00 0.00 2.77
546 547 0.891904 TCCGGTAACAAGGGCAAAGC 60.892 55.000 0.00 0.00 0.00 3.51
581 582 3.419759 GCGCCGTCGACATTGGTT 61.420 61.111 17.16 0.00 38.10 3.67
582 583 2.474266 CGCCGTCGACATTGGTTG 59.526 61.111 17.16 2.55 38.10 3.77
583 584 2.314647 CGCCGTCGACATTGGTTGT 61.315 57.895 17.16 0.00 42.79 3.32
584 585 1.206578 GCCGTCGACATTGGTTGTG 59.793 57.895 17.16 0.00 39.18 3.33
585 586 1.866237 CCGTCGACATTGGTTGTGG 59.134 57.895 17.16 0.88 39.18 4.17
586 587 1.206578 CGTCGACATTGGTTGTGGC 59.793 57.895 17.16 0.00 39.18 5.01
587 588 1.502990 CGTCGACATTGGTTGTGGCA 61.503 55.000 17.16 0.00 39.18 4.92
588 589 0.881118 GTCGACATTGGTTGTGGCAT 59.119 50.000 11.55 0.00 39.18 4.40
589 590 1.135689 GTCGACATTGGTTGTGGCATC 60.136 52.381 11.55 0.00 39.18 3.91
590 591 0.171007 CGACATTGGTTGTGGCATCC 59.829 55.000 0.00 0.00 39.18 3.51
591 592 0.532115 GACATTGGTTGTGGCATCCC 59.468 55.000 0.00 0.00 39.18 3.85
592 593 0.114954 ACATTGGTTGTGGCATCCCT 59.885 50.000 0.00 0.00 37.11 4.20
593 594 0.819582 CATTGGTTGTGGCATCCCTC 59.180 55.000 0.00 0.00 0.00 4.30
594 595 0.706433 ATTGGTTGTGGCATCCCTCT 59.294 50.000 0.00 0.00 0.00 3.69
595 596 0.251297 TTGGTTGTGGCATCCCTCTG 60.251 55.000 0.00 0.00 0.00 3.35
596 597 2.048603 GGTTGTGGCATCCCTCTGC 61.049 63.158 0.00 0.00 41.53 4.26
597 598 1.303561 GTTGTGGCATCCCTCTGCA 60.304 57.895 0.00 0.00 44.12 4.41
598 599 1.303561 TTGTGGCATCCCTCTGCAC 60.304 57.895 0.00 0.00 44.12 4.57
599 600 1.782201 TTGTGGCATCCCTCTGCACT 61.782 55.000 0.00 0.00 44.12 4.40
600 601 1.748122 GTGGCATCCCTCTGCACTG 60.748 63.158 0.00 0.00 44.12 3.66
601 602 2.827642 GGCATCCCTCTGCACTGC 60.828 66.667 0.00 0.00 44.12 4.40
602 603 3.200593 GCATCCCTCTGCACTGCG 61.201 66.667 0.00 0.00 41.87 5.18
603 604 3.200593 CATCCCTCTGCACTGCGC 61.201 66.667 0.00 0.00 42.89 6.09
638 639 4.869440 CTCCTCTGCGAGCGCCAG 62.869 72.222 12.70 4.51 41.09 4.85
656 657 4.078516 GCTACGGCCGGACAAGGT 62.079 66.667 31.76 9.01 0.00 3.50
657 658 2.660802 CTACGGCCGGACAAGGTT 59.339 61.111 31.76 8.14 0.00 3.50
658 659 1.740296 CTACGGCCGGACAAGGTTG 60.740 63.158 31.76 2.37 0.00 3.77
659 660 3.887335 TACGGCCGGACAAGGTTGC 62.887 63.158 31.76 0.00 0.00 4.17
664 665 3.283684 CGGACAAGGTTGCCGCAA 61.284 61.111 0.38 0.38 39.55 4.85
665 666 2.335011 GGACAAGGTTGCCGCAAC 59.665 61.111 25.22 25.22 42.89 4.17
679 680 3.697747 CAACCCACCGACGCCCTA 61.698 66.667 0.00 0.00 0.00 3.53
680 681 3.698820 AACCCACCGACGCCCTAC 61.699 66.667 0.00 0.00 0.00 3.18
701 702 4.477975 CGCTGGAGGGACGACGAC 62.478 72.222 0.00 0.00 0.00 4.34
702 703 4.477975 GCTGGAGGGACGACGACG 62.478 72.222 5.58 5.58 45.75 5.12
703 704 2.745100 CTGGAGGGACGACGACGA 60.745 66.667 15.32 0.00 42.66 4.20
704 705 2.045634 TGGAGGGACGACGACGAT 60.046 61.111 15.32 0.00 42.66 3.73
705 706 2.324332 CTGGAGGGACGACGACGATG 62.324 65.000 15.32 0.00 42.66 3.84
706 707 2.110967 GGAGGGACGACGACGATGA 61.111 63.158 15.32 0.00 42.66 2.92
707 708 1.062206 GAGGGACGACGACGATGAC 59.938 63.158 15.32 1.36 42.66 3.06
708 709 2.277120 GGGACGACGACGATGACG 60.277 66.667 15.32 4.49 42.66 4.35
709 710 2.743752 GGGACGACGACGATGACGA 61.744 63.158 15.32 0.00 42.66 4.20
710 711 1.579626 GGACGACGACGATGACGAC 60.580 63.158 15.32 2.54 42.66 4.34
711 712 1.131218 GACGACGACGATGACGACA 59.869 57.895 15.32 0.00 42.66 4.35
712 713 0.451628 GACGACGACGATGACGACAA 60.452 55.000 15.32 0.00 42.66 3.18
713 714 0.723790 ACGACGACGATGACGACAAC 60.724 55.000 15.32 0.00 42.66 3.32
714 715 0.723459 CGACGACGATGACGACAACA 60.723 55.000 0.00 0.00 42.66 3.33
715 716 0.701303 GACGACGATGACGACAACAC 59.299 55.000 0.00 0.00 42.66 3.32
716 717 0.995234 ACGACGATGACGACAACACG 60.995 55.000 0.00 0.00 42.66 4.49
717 718 1.661948 CGACGATGACGACAACACGG 61.662 60.000 13.74 0.00 42.66 4.94
718 719 0.386352 GACGATGACGACAACACGGA 60.386 55.000 13.74 0.00 42.66 4.69
719 720 0.662374 ACGATGACGACAACACGGAC 60.662 55.000 13.74 0.00 42.66 4.79
720 721 0.662077 CGATGACGACAACACGGACA 60.662 55.000 0.00 0.00 42.66 4.02
721 722 1.493772 GATGACGACAACACGGACAA 58.506 50.000 0.00 0.00 37.61 3.18
722 723 1.191647 GATGACGACAACACGGACAAC 59.808 52.381 0.00 0.00 37.61 3.32
759 760 4.849310 ACGGCGGCCATGCGTTAT 62.849 61.111 20.71 0.00 35.06 1.89
760 761 3.582120 CGGCGGCCATGCGTTATT 61.582 61.111 20.71 0.00 35.06 1.40
761 762 2.804856 GGCGGCCATGCGTTATTT 59.195 55.556 15.62 0.00 35.06 1.40
762 763 1.588667 GGCGGCCATGCGTTATTTG 60.589 57.895 15.62 0.00 35.06 2.32
763 764 1.431440 GCGGCCATGCGTTATTTGA 59.569 52.632 2.24 0.00 0.00 2.69
764 765 0.179150 GCGGCCATGCGTTATTTGAA 60.179 50.000 2.24 0.00 0.00 2.69
765 766 1.734047 GCGGCCATGCGTTATTTGAAA 60.734 47.619 2.24 0.00 0.00 2.69
766 767 2.808244 CGGCCATGCGTTATTTGAAAT 58.192 42.857 2.24 0.00 0.00 2.17
767 768 2.535166 CGGCCATGCGTTATTTGAAATG 59.465 45.455 2.24 0.00 0.00 2.32
768 769 3.520569 GGCCATGCGTTATTTGAAATGT 58.479 40.909 0.00 0.00 0.00 2.71
769 770 4.677584 GGCCATGCGTTATTTGAAATGTA 58.322 39.130 0.00 0.00 0.00 2.29
770 771 5.288804 GGCCATGCGTTATTTGAAATGTAT 58.711 37.500 0.00 0.00 0.00 2.29
771 772 6.442952 GGCCATGCGTTATTTGAAATGTATA 58.557 36.000 0.00 0.00 0.00 1.47
772 773 6.362283 GGCCATGCGTTATTTGAAATGTATAC 59.638 38.462 0.00 0.00 0.00 1.47
773 774 6.915300 GCCATGCGTTATTTGAAATGTATACA 59.085 34.615 8.27 8.27 0.00 2.29
774 775 7.594758 GCCATGCGTTATTTGAAATGTATACAT 59.405 33.333 12.75 12.75 38.41 2.29
795 796 7.492352 ACATATAGTTTTGAATAACCGGCTC 57.508 36.000 0.00 0.00 0.00 4.70
796 797 6.485648 ACATATAGTTTTGAATAACCGGCTCC 59.514 38.462 0.00 0.00 0.00 4.70
797 798 3.434940 AGTTTTGAATAACCGGCTCCT 57.565 42.857 0.00 0.00 0.00 3.69
798 799 3.081804 AGTTTTGAATAACCGGCTCCTG 58.918 45.455 0.00 0.00 0.00 3.86
799 800 2.817844 GTTTTGAATAACCGGCTCCTGT 59.182 45.455 0.00 0.00 0.00 4.00
800 801 3.985019 TTTGAATAACCGGCTCCTGTA 57.015 42.857 0.00 0.00 0.00 2.74
801 802 4.497291 TTTGAATAACCGGCTCCTGTAT 57.503 40.909 0.00 0.00 0.00 2.29
802 803 4.497291 TTGAATAACCGGCTCCTGTATT 57.503 40.909 0.00 0.00 0.00 1.89
803 804 4.497291 TGAATAACCGGCTCCTGTATTT 57.503 40.909 0.00 0.00 0.00 1.40
804 805 4.196193 TGAATAACCGGCTCCTGTATTTG 58.804 43.478 0.00 0.00 0.00 2.32
805 806 3.926058 ATAACCGGCTCCTGTATTTGT 57.074 42.857 0.00 0.00 0.00 2.83
806 807 1.821216 AACCGGCTCCTGTATTTGTG 58.179 50.000 0.00 0.00 0.00 3.33
807 808 0.690762 ACCGGCTCCTGTATTTGTGT 59.309 50.000 0.00 0.00 0.00 3.72
808 809 1.338769 ACCGGCTCCTGTATTTGTGTC 60.339 52.381 0.00 0.00 0.00 3.67
809 810 1.369625 CGGCTCCTGTATTTGTGTCC 58.630 55.000 0.00 0.00 0.00 4.02
810 811 1.338674 CGGCTCCTGTATTTGTGTCCA 60.339 52.381 0.00 0.00 0.00 4.02
811 812 2.680805 CGGCTCCTGTATTTGTGTCCAT 60.681 50.000 0.00 0.00 0.00 3.41
812 813 3.431626 CGGCTCCTGTATTTGTGTCCATA 60.432 47.826 0.00 0.00 0.00 2.74
813 814 4.130118 GGCTCCTGTATTTGTGTCCATAG 58.870 47.826 0.00 0.00 0.00 2.23
814 815 4.141711 GGCTCCTGTATTTGTGTCCATAGA 60.142 45.833 0.00 0.00 0.00 1.98
815 816 4.811557 GCTCCTGTATTTGTGTCCATAGAC 59.188 45.833 0.00 0.00 43.83 2.59
816 817 5.353394 TCCTGTATTTGTGTCCATAGACC 57.647 43.478 0.00 0.00 42.81 3.85
817 818 4.119862 CCTGTATTTGTGTCCATAGACCG 58.880 47.826 0.00 0.00 42.81 4.79
818 819 4.119862 CTGTATTTGTGTCCATAGACCGG 58.880 47.826 0.00 0.00 42.81 5.28
819 820 3.516300 TGTATTTGTGTCCATAGACCGGT 59.484 43.478 6.92 6.92 42.81 5.28
820 821 2.754946 TTTGTGTCCATAGACCGGTC 57.245 50.000 27.67 27.67 42.81 4.79
821 822 1.933021 TTGTGTCCATAGACCGGTCT 58.067 50.000 37.59 37.59 42.81 3.85
822 823 1.471119 TGTGTCCATAGACCGGTCTC 58.529 55.000 39.49 24.80 42.81 3.36
823 824 0.381089 GTGTCCATAGACCGGTCTCG 59.619 60.000 39.49 29.35 42.81 4.04
824 825 1.359475 GTCCATAGACCGGTCTCGC 59.641 63.158 39.49 21.18 40.93 5.03
825 826 1.826921 TCCATAGACCGGTCTCGCC 60.827 63.158 39.49 11.73 40.93 5.54
826 827 1.828660 CCATAGACCGGTCTCGCCT 60.829 63.158 39.49 19.24 40.93 5.52
827 828 1.392710 CCATAGACCGGTCTCGCCTT 61.393 60.000 39.49 18.46 40.93 4.35
828 829 0.030908 CATAGACCGGTCTCGCCTTC 59.969 60.000 39.49 9.18 40.93 3.46
829 830 1.108132 ATAGACCGGTCTCGCCTTCC 61.108 60.000 39.49 8.35 40.93 3.46
830 831 2.488771 TAGACCGGTCTCGCCTTCCA 62.489 60.000 39.49 17.83 40.93 3.53
831 832 2.683933 ACCGGTCTCGCCTTCCAT 60.684 61.111 0.00 0.00 34.25 3.41
832 833 1.380785 ACCGGTCTCGCCTTCCATA 60.381 57.895 0.00 0.00 34.25 2.74
833 834 0.974010 ACCGGTCTCGCCTTCCATAA 60.974 55.000 0.00 0.00 34.25 1.90
834 835 0.177141 CCGGTCTCGCCTTCCATAAA 59.823 55.000 0.00 0.00 34.25 1.40
835 836 1.287425 CGGTCTCGCCTTCCATAAAC 58.713 55.000 0.00 0.00 34.25 2.01
836 837 1.287425 GGTCTCGCCTTCCATAAACG 58.713 55.000 0.00 0.00 0.00 3.60
837 838 1.134907 GGTCTCGCCTTCCATAAACGA 60.135 52.381 0.00 0.00 0.00 3.85
838 839 2.613691 GTCTCGCCTTCCATAAACGAA 58.386 47.619 0.00 0.00 31.60 3.85
839 840 3.195661 GTCTCGCCTTCCATAAACGAAT 58.804 45.455 0.00 0.00 31.60 3.34
840 841 4.365723 GTCTCGCCTTCCATAAACGAATA 58.634 43.478 0.00 0.00 31.60 1.75
841 842 4.208666 GTCTCGCCTTCCATAAACGAATAC 59.791 45.833 0.00 0.00 31.60 1.89
842 843 4.116961 CTCGCCTTCCATAAACGAATACA 58.883 43.478 0.00 0.00 31.60 2.29
843 844 4.116961 TCGCCTTCCATAAACGAATACAG 58.883 43.478 0.00 0.00 0.00 2.74
844 845 3.869246 CGCCTTCCATAAACGAATACAGT 59.131 43.478 0.00 0.00 0.00 3.55
845 846 5.045215 CGCCTTCCATAAACGAATACAGTA 58.955 41.667 0.00 0.00 0.00 2.74
846 847 5.694910 CGCCTTCCATAAACGAATACAGTAT 59.305 40.000 0.00 0.00 0.00 2.12
847 848 6.128902 CGCCTTCCATAAACGAATACAGTATC 60.129 42.308 0.00 0.00 0.00 2.24
848 849 6.128902 GCCTTCCATAAACGAATACAGTATCG 60.129 42.308 9.53 9.53 44.33 2.92
857 858 5.487552 CGAATACAGTATCGTTGAGATGC 57.512 43.478 0.00 0.00 40.40 3.91
858 859 4.383052 CGAATACAGTATCGTTGAGATGCC 59.617 45.833 0.00 0.00 42.05 4.40
859 860 2.604046 ACAGTATCGTTGAGATGCCC 57.396 50.000 0.00 0.00 42.05 5.36
860 861 2.111384 ACAGTATCGTTGAGATGCCCT 58.889 47.619 0.00 0.00 42.05 5.19
861 862 3.296854 ACAGTATCGTTGAGATGCCCTA 58.703 45.455 0.00 0.00 42.05 3.53
862 863 3.704566 ACAGTATCGTTGAGATGCCCTAA 59.295 43.478 0.00 0.00 42.05 2.69
863 864 4.051922 CAGTATCGTTGAGATGCCCTAAC 58.948 47.826 0.00 0.00 42.05 2.34
864 865 2.622064 ATCGTTGAGATGCCCTAACC 57.378 50.000 0.00 0.00 38.36 2.85
865 866 0.174845 TCGTTGAGATGCCCTAACCG 59.825 55.000 0.00 0.00 0.00 4.44
866 867 0.108329 CGTTGAGATGCCCTAACCGT 60.108 55.000 0.00 0.00 0.00 4.83
867 868 1.369625 GTTGAGATGCCCTAACCGTG 58.630 55.000 0.00 0.00 0.00 4.94
868 869 1.066430 GTTGAGATGCCCTAACCGTGA 60.066 52.381 0.00 0.00 0.00 4.35
869 870 0.824109 TGAGATGCCCTAACCGTGAG 59.176 55.000 0.00 0.00 0.00 3.51
870 871 1.112113 GAGATGCCCTAACCGTGAGA 58.888 55.000 0.00 0.00 0.00 3.27
871 872 0.824759 AGATGCCCTAACCGTGAGAC 59.175 55.000 0.00 0.00 0.00 3.36
872 873 0.179081 GATGCCCTAACCGTGAGACC 60.179 60.000 0.00 0.00 0.00 3.85
873 874 0.907704 ATGCCCTAACCGTGAGACCA 60.908 55.000 0.00 0.00 0.00 4.02
874 875 1.218316 GCCCTAACCGTGAGACCAG 59.782 63.158 0.00 0.00 0.00 4.00
875 876 1.898154 CCCTAACCGTGAGACCAGG 59.102 63.158 0.00 0.00 0.00 4.45
876 877 0.903454 CCCTAACCGTGAGACCAGGT 60.903 60.000 0.00 0.00 40.50 4.00
877 878 0.531200 CCTAACCGTGAGACCAGGTC 59.469 60.000 12.25 12.25 37.26 3.85
878 879 0.170561 CTAACCGTGAGACCAGGTCG 59.829 60.000 14.32 2.52 37.26 4.79
879 880 0.538057 TAACCGTGAGACCAGGTCGT 60.538 55.000 14.32 2.53 37.26 4.34
880 881 0.538057 AACCGTGAGACCAGGTCGTA 60.538 55.000 14.32 4.34 37.26 3.43
881 882 0.959372 ACCGTGAGACCAGGTCGTAG 60.959 60.000 14.32 7.12 37.67 3.51
882 883 0.959372 CCGTGAGACCAGGTCGTAGT 60.959 60.000 14.32 0.00 37.67 2.73
883 884 1.676916 CCGTGAGACCAGGTCGTAGTA 60.677 57.143 14.32 0.00 37.67 1.82
884 885 2.286872 CGTGAGACCAGGTCGTAGTAT 58.713 52.381 14.32 0.00 37.67 2.12
885 886 3.461061 CGTGAGACCAGGTCGTAGTATA 58.539 50.000 14.32 0.00 37.67 1.47
886 887 3.873361 CGTGAGACCAGGTCGTAGTATAA 59.127 47.826 14.32 0.00 37.67 0.98
887 888 4.514441 CGTGAGACCAGGTCGTAGTATAAT 59.486 45.833 14.32 0.00 37.67 1.28
888 889 5.698089 CGTGAGACCAGGTCGTAGTATAATA 59.302 44.000 14.32 0.00 37.67 0.98
889 890 6.203530 CGTGAGACCAGGTCGTAGTATAATAA 59.796 42.308 14.32 0.00 37.67 1.40
890 891 7.254898 CGTGAGACCAGGTCGTAGTATAATAAA 60.255 40.741 14.32 0.00 37.67 1.40
891 892 8.408601 GTGAGACCAGGTCGTAGTATAATAAAA 58.591 37.037 14.32 0.00 37.67 1.52
892 893 8.970020 TGAGACCAGGTCGTAGTATAATAAAAA 58.030 33.333 14.32 0.00 37.67 1.94
917 918 1.506493 CCTGTGAGTGTCTTCAGCAC 58.494 55.000 0.00 0.00 37.13 4.40
954 955 1.102978 GCCACAGTGTTTCACCTTGT 58.897 50.000 0.00 0.00 34.49 3.16
1012 1016 1.378250 GCAGCCATGTTCCTCTGCT 60.378 57.895 5.89 0.54 46.00 4.24
1040 1044 2.266055 CCTCACCTTCTCACCGCC 59.734 66.667 0.00 0.00 0.00 6.13
1187 1191 3.049674 CAGCAACACCGATGCCGT 61.050 61.111 0.00 0.00 44.91 5.68
1566 1573 1.954362 GCATCGGCTCACTGGTCTCT 61.954 60.000 0.00 0.00 36.96 3.10
1599 1606 1.749258 GGTGAATCCGGTCTTGGCC 60.749 63.158 0.00 0.00 0.00 5.36
1893 1900 1.524621 GTATGATGCACGCAGGGCT 60.525 57.895 0.00 0.00 0.00 5.19
2097 2104 5.557576 TGATAGGATATGCAGTCAGCTTT 57.442 39.130 0.00 0.00 45.94 3.51
2136 2143 6.498304 AGACACTTTGCAGTTGATTGTTAAG 58.502 36.000 0.00 0.00 0.00 1.85
2139 2146 6.095440 ACACTTTGCAGTTGATTGTTAAGAGT 59.905 34.615 0.00 0.00 0.00 3.24
2145 2152 7.542890 TGCAGTTGATTGTTAAGAGTTTTTCA 58.457 30.769 0.00 0.00 0.00 2.69
2146 2153 8.031864 TGCAGTTGATTGTTAAGAGTTTTTCAA 58.968 29.630 0.00 0.00 0.00 2.69
2147 2154 9.034544 GCAGTTGATTGTTAAGAGTTTTTCAAT 57.965 29.630 0.00 0.00 0.00 2.57
2204 2211 0.465705 GATCATGGCAGGAACGAGGA 59.534 55.000 5.73 0.00 0.00 3.71
2205 2212 0.467384 ATCATGGCAGGAACGAGGAG 59.533 55.000 5.73 0.00 0.00 3.69
2206 2213 1.153289 CATGGCAGGAACGAGGAGG 60.153 63.158 0.00 0.00 0.00 4.30
2223 2230 0.601841 AGGTGGTTCTTACGTTGGCG 60.602 55.000 0.00 0.00 44.93 5.69
2226 2233 0.678395 TGGTTCTTACGTTGGCGGTA 59.322 50.000 0.00 0.00 43.45 4.02
2232 2239 3.016031 TCTTACGTTGGCGGTACTGATA 58.984 45.455 5.68 0.00 43.45 2.15
2292 2299 3.531934 GCCAAGGCATTAGATTTTGCT 57.468 42.857 6.14 0.00 41.49 3.91
2316 2323 4.219725 GGGGTTTATGCAAACTGCTTCTTA 59.780 41.667 0.00 0.00 45.31 2.10
2359 2366 0.107214 GGCCTGGATTCATCGGTCAA 60.107 55.000 0.00 0.00 0.00 3.18
2376 2383 5.001232 CGGTCAAGGAAAAAGAGGTAATGA 58.999 41.667 0.00 0.00 0.00 2.57
2442 2449 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
2443 2450 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
2444 2451 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
2445 2452 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
2446 2453 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
2461 2468 6.518208 AGAGCGTTTAGATCACTTAAGAGT 57.482 37.500 10.09 0.00 37.82 3.24
2462 2469 7.627298 AGAGCGTTTAGATCACTTAAGAGTA 57.373 36.000 10.09 0.00 37.82 2.59
2463 2470 7.474190 AGAGCGTTTAGATCACTTAAGAGTAC 58.526 38.462 10.09 0.70 37.82 2.73
2464 2471 6.256686 AGCGTTTAGATCACTTAAGAGTACG 58.743 40.000 10.09 8.03 33.90 3.67
2539 2546 6.317140 CCACCAATGGTCATATATACATGCTC 59.683 42.308 0.00 0.00 41.64 4.26
2558 2567 7.120579 ACATGCTCAAATAATGGAAACGAAGTA 59.879 33.333 0.00 0.00 45.00 2.24
2600 2609 2.901839 TCAGGGTTCCTAACTTACGCTT 59.098 45.455 0.00 0.00 33.44 4.68
2613 2622 1.663695 TACGCTTAATGCCTTGGCTC 58.336 50.000 13.18 0.00 38.78 4.70
2648 2657 4.487714 TTGCTGAATGGGGACTAAGTAG 57.512 45.455 0.00 0.00 0.00 2.57
2706 2718 2.182014 GTTCAACAGTTCCGTGTTTGC 58.818 47.619 0.00 0.00 38.65 3.68
2729 2741 2.486472 ACTGACTCAAATGGCTCCAG 57.514 50.000 0.00 0.00 0.00 3.86
2840 2853 1.186200 CAAGATCAGGGACTCACGGA 58.814 55.000 0.00 0.00 34.60 4.69
3456 3475 0.107214 CACCGGGTTGTATCTGGCAT 60.107 55.000 6.32 0.00 34.06 4.40
3479 3498 7.095397 GCATTTGGAAGGGTGTGTTTTATTAAC 60.095 37.037 0.00 0.00 0.00 2.01
3861 3881 0.172578 CTTCGGCTGATACCACGACA 59.827 55.000 0.00 0.00 34.82 4.35
3922 3942 3.393800 CGTATAGACCAAATGGCCAGAG 58.606 50.000 13.05 2.86 39.32 3.35
4093 4113 5.350633 CGACCCGACTTTATTTACCACATA 58.649 41.667 0.00 0.00 0.00 2.29
4334 4356 7.203910 ACACTACTCTAATGCAAGCAGTATAC 58.796 38.462 2.49 0.00 0.00 1.47
4347 4370 6.520272 CAAGCAGTATACAGAAGAATAGGCT 58.480 40.000 5.50 0.00 0.00 4.58
4351 4374 8.962679 AGCAGTATACAGAAGAATAGGCTATAC 58.037 37.037 7.59 0.00 0.00 1.47
4847 4904 1.741770 GTGGGGATGACGTCAGCAC 60.742 63.158 32.33 30.01 34.37 4.40
5213 5281 2.646175 GGGCCACAGTCAGCGACTA 61.646 63.158 4.39 0.00 41.37 2.59
5326 5426 1.847798 AAATGCTACAGGGCACGGGA 61.848 55.000 0.00 0.00 45.36 5.14
5489 5589 3.766168 GCACCAAAACATGCGCGC 61.766 61.111 27.26 27.26 30.97 6.86
5786 5886 0.891904 GCCAAAGGGAGTAAACGGCA 60.892 55.000 0.00 0.00 37.98 5.69
5905 6018 2.754658 GGGGAAGACGAGCTCGGA 60.755 66.667 36.93 0.00 44.95 4.55
6134 6248 1.258445 GGGTTTGGGCGAGAGAGAGA 61.258 60.000 0.00 0.00 0.00 3.10
6336 6487 6.170506 GGGTTCCTTTTTCTTCTGTTTTGTT 58.829 36.000 0.00 0.00 0.00 2.83
6337 6488 6.653320 GGGTTCCTTTTTCTTCTGTTTTGTTT 59.347 34.615 0.00 0.00 0.00 2.83
6338 6489 7.174253 GGGTTCCTTTTTCTTCTGTTTTGTTTT 59.826 33.333 0.00 0.00 0.00 2.43
6339 6490 8.015087 GGTTCCTTTTTCTTCTGTTTTGTTTTG 58.985 33.333 0.00 0.00 0.00 2.44
6340 6491 8.556194 GTTCCTTTTTCTTCTGTTTTGTTTTGT 58.444 29.630 0.00 0.00 0.00 2.83
6341 6492 8.669946 TCCTTTTTCTTCTGTTTTGTTTTGTT 57.330 26.923 0.00 0.00 0.00 2.83
6342 6493 9.114952 TCCTTTTTCTTCTGTTTTGTTTTGTTT 57.885 25.926 0.00 0.00 0.00 2.83
6718 6872 7.277098 TCGAACTAACACCAGATTAATAACAGC 59.723 37.037 0.00 0.00 0.00 4.40
6776 6930 1.730612 GTAGCTTAATTATCCGGGCGC 59.269 52.381 0.00 0.00 0.00 6.53
6786 6940 4.388499 CCGGGCGCCACACTAGTT 62.388 66.667 30.85 0.00 0.00 2.24
6802 6956 7.881232 CCACACTAGTTCCCTTTTATACTTCAA 59.119 37.037 0.00 0.00 0.00 2.69
6825 6979 4.271291 AGTTTCGAGACTTTCTGCTTTGTC 59.729 41.667 2.13 0.00 0.00 3.18
6914 7068 7.809806 AGTTTAGCATGTTTTCTAGCAACATTC 59.190 33.333 14.32 11.23 41.19 2.67
6928 7082 6.795098 AGCAACATTCGTGTATAAAGTTGA 57.205 33.333 0.00 0.00 37.62 3.18
6976 7131 7.446931 TGCAAACAAAGTATGAATACTCTGGAA 59.553 33.333 8.31 0.00 42.47 3.53
6997 7152 1.334869 CTGTTGAGTTTCCACACAGCC 59.665 52.381 0.00 0.00 0.00 4.85
7103 7258 7.657336 AGACGACCATCAAAATTTGTTGTAAT 58.343 30.769 13.67 2.02 0.00 1.89
7132 7288 8.093927 AGAAACTTCTGGCTATATTATCTGAGC 58.906 37.037 0.00 0.00 35.89 4.26
7157 7313 7.469043 GCTTGCATTCAGTATATGTGATTTGGA 60.469 37.037 0.00 0.00 0.00 3.53
7246 7405 0.768221 AGACCCTCCAGCTTGACCAA 60.768 55.000 0.00 0.00 0.00 3.67
7289 7450 5.648092 ACTGCTACACTTTTTGTCTGAAACT 59.352 36.000 0.00 0.00 39.91 2.66
7349 7510 5.331876 ACTACTCAGATTAGCCTGACAAC 57.668 43.478 0.00 0.00 38.18 3.32
7362 7523 3.805108 GCCTGACAACAAGACATCTCAGT 60.805 47.826 0.00 0.00 0.00 3.41
7391 7552 6.122850 GCATAATGCAATCACACACTTCTA 57.877 37.500 0.00 0.00 44.26 2.10
7402 7563 2.438021 ACACACTTCTACAGCCCTTTCA 59.562 45.455 0.00 0.00 0.00 2.69
7422 7583 7.713073 CCTTTCATCTACCTCTTTTCTGGATAC 59.287 40.741 0.00 0.00 0.00 2.24
7437 7598 6.709018 TCTGGATACGAACATGTCATTCTA 57.291 37.500 0.00 0.00 42.51 2.10
7520 7681 5.013861 TCGTTTGTCTTTATTCGTTCTGC 57.986 39.130 0.00 0.00 0.00 4.26
7595 7756 4.841443 TGTCATTACGTGTGTGAGTAGT 57.159 40.909 0.00 0.00 0.00 2.73
7777 7943 6.091986 TCAACATTTTTGGTTTGCTTCTTCAC 59.908 34.615 0.00 0.00 0.00 3.18
7806 7972 2.808543 GTCACCTGGTTCATGTGAAGAC 59.191 50.000 0.00 0.00 39.77 3.01
7849 8015 5.227569 TGCTCTCTTGGTACTTTTCATCA 57.772 39.130 0.00 0.00 0.00 3.07
7857 8023 3.438781 TGGTACTTTTCATCATTGCGGTC 59.561 43.478 0.00 0.00 0.00 4.79
7947 8113 2.149578 GAGTGCTGAGCAAGTCACAAT 58.850 47.619 9.51 0.00 41.47 2.71
7997 8163 8.076178 ACTGAAGTTTCTGTTTCATAATTTCCG 58.924 33.333 0.00 0.00 36.15 4.30
8028 8194 9.469807 TGTGCAAATTAAAATCGTGAAGTTATT 57.530 25.926 0.00 0.00 0.00 1.40
8117 8283 5.933187 ATGTTATCAAACGTGTGCAGTAA 57.067 34.783 0.00 0.00 38.53 2.24
8126 8292 8.635877 TCAAACGTGTGCAGTAAAAATAAAAT 57.364 26.923 0.00 0.00 0.00 1.82
8229 8395 3.257393 CGGATTCTCTTGTGACTCCTTG 58.743 50.000 7.24 0.00 34.74 3.61
8271 8437 2.484264 AGTGTTTAGAGCAACATTCGGC 59.516 45.455 0.00 0.00 38.89 5.54
8303 8469 4.781775 TTTTAGGAACCCTTGTGTCTGA 57.218 40.909 0.00 0.00 34.61 3.27
8310 8476 3.864789 ACCCTTGTGTCTGATGTTCTT 57.135 42.857 0.00 0.00 0.00 2.52
8327 8493 5.751586 TGTTCTTTCTTACCACTGGAGTTT 58.248 37.500 0.71 0.00 0.00 2.66
8345 8511 7.610865 TGGAGTTTTTCTGACAACTTTGATTT 58.389 30.769 0.00 0.00 33.22 2.17
8390 8556 5.220854 CCAGCTATGTTATTTGTACTGGTGC 60.221 44.000 0.00 0.00 38.87 5.01
8399 8565 9.811995 TGTTATTTGTACTGGTGCTTACTATAG 57.188 33.333 0.00 0.00 0.00 1.31
8479 8645 4.037222 TCTGTAATGTTGATCCAGGCCTA 58.963 43.478 3.98 0.00 0.00 3.93
8499 8665 5.067283 GCCTAACCATCATTCCGTTAAATGT 59.933 40.000 0.00 0.00 37.77 2.71
8711 8982 5.449297 TTGGTAGGGTGAAATCATGATCA 57.551 39.130 9.06 1.24 0.00 2.92
8801 9072 9.537192 ACATATTGAAATGAAATTAGCACATGG 57.463 29.630 0.00 0.00 33.67 3.66
8823 9094 3.942130 AAAATACCTCACCAAGCTTGC 57.058 42.857 21.43 0.00 0.00 4.01
8832 9103 3.221771 TCACCAAGCTTGCACTACATTT 58.778 40.909 21.43 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.291365 CATTTGATCAGGATGCCGTCA 58.709 47.619 7.85 0.00 34.76 4.35
3 4 1.027357 GCATTTGATCAGGATGCCGT 58.973 50.000 24.63 0.00 40.10 5.68
5 6 2.225019 CGTAGCATTTGATCAGGATGCC 59.775 50.000 28.33 19.06 45.50 4.40
6 7 2.874701 ACGTAGCATTTGATCAGGATGC 59.125 45.455 26.37 26.37 44.89 3.91
8 9 4.406648 TGACGTAGCATTTGATCAGGAT 57.593 40.909 0.00 0.00 0.00 3.24
11 12 3.310774 CCCTTGACGTAGCATTTGATCAG 59.689 47.826 0.00 0.00 0.00 2.90
12 13 3.270027 CCCTTGACGTAGCATTTGATCA 58.730 45.455 0.00 0.00 0.00 2.92
14 15 2.643551 CCCCTTGACGTAGCATTTGAT 58.356 47.619 0.00 0.00 0.00 2.57
15 16 1.339631 CCCCCTTGACGTAGCATTTGA 60.340 52.381 0.00 0.00 0.00 2.69
17 18 0.988832 TCCCCCTTGACGTAGCATTT 59.011 50.000 0.00 0.00 0.00 2.32
18 19 0.541863 CTCCCCCTTGACGTAGCATT 59.458 55.000 0.00 0.00 0.00 3.56
19 20 1.338136 CCTCCCCCTTGACGTAGCAT 61.338 60.000 0.00 0.00 0.00 3.79
20 21 1.987855 CCTCCCCCTTGACGTAGCA 60.988 63.158 0.00 0.00 0.00 3.49
21 22 1.677637 CTCCTCCCCCTTGACGTAGC 61.678 65.000 0.00 0.00 0.00 3.58
22 23 1.677637 GCTCCTCCCCCTTGACGTAG 61.678 65.000 0.00 0.00 0.00 3.51
23 24 1.684734 GCTCCTCCCCCTTGACGTA 60.685 63.158 0.00 0.00 0.00 3.57
25 26 3.787001 GGCTCCTCCCCCTTGACG 61.787 72.222 0.00 0.00 0.00 4.35
26 27 3.787001 CGGCTCCTCCCCCTTGAC 61.787 72.222 0.00 0.00 0.00 3.18
56 57 4.814294 GATCTGGACGCCGCGGTT 62.814 66.667 28.70 14.78 0.00 4.44
68 69 4.794439 TCACACGCGGCCGATCTG 62.794 66.667 33.48 21.68 38.29 2.90
69 70 3.989698 CTTCACACGCGGCCGATCT 62.990 63.158 33.48 6.57 38.29 2.75
70 71 3.554692 CTTCACACGCGGCCGATC 61.555 66.667 33.48 11.71 38.29 3.69
75 76 4.373116 TCCTCCTTCACACGCGGC 62.373 66.667 12.47 0.00 0.00 6.53
76 77 2.125912 CTCCTCCTTCACACGCGG 60.126 66.667 12.47 1.27 0.00 6.46
77 78 2.811317 GCTCCTCCTTCACACGCG 60.811 66.667 3.53 3.53 0.00 6.01
78 79 2.435059 GGCTCCTCCTTCACACGC 60.435 66.667 0.00 0.00 0.00 5.34
79 80 2.266055 GGGCTCCTCCTTCACACG 59.734 66.667 0.00 0.00 34.39 4.49
80 81 2.266055 CGGGCTCCTCCTTCACAC 59.734 66.667 0.00 0.00 34.39 3.82
81 82 2.203788 ACGGGCTCCTCCTTCACA 60.204 61.111 0.00 0.00 34.39 3.58
82 83 2.266055 CACGGGCTCCTCCTTCAC 59.734 66.667 0.00 0.00 34.39 3.18
83 84 2.203788 ACACGGGCTCCTCCTTCA 60.204 61.111 0.00 0.00 34.39 3.02
84 85 2.579738 GACACGGGCTCCTCCTTC 59.420 66.667 0.00 0.00 34.39 3.46
85 86 3.003763 GGACACGGGCTCCTCCTT 61.004 66.667 0.00 0.00 34.39 3.36
109 110 4.690719 TAGTGGTTGTGCGGCGGG 62.691 66.667 9.78 0.00 0.00 6.13
110 111 3.419759 GTAGTGGTTGTGCGGCGG 61.420 66.667 9.78 0.00 0.00 6.13
111 112 3.773630 CGTAGTGGTTGTGCGGCG 61.774 66.667 0.51 0.51 0.00 6.46
112 113 4.084888 GCGTAGTGGTTGTGCGGC 62.085 66.667 0.00 0.00 0.00 6.53
113 114 3.419759 GGCGTAGTGGTTGTGCGG 61.420 66.667 0.00 0.00 0.00 5.69
114 115 3.419759 GGGCGTAGTGGTTGTGCG 61.420 66.667 0.00 0.00 0.00 5.34
115 116 0.391927 TATGGGCGTAGTGGTTGTGC 60.392 55.000 0.00 0.00 0.00 4.57
116 117 2.210116 GATATGGGCGTAGTGGTTGTG 58.790 52.381 0.00 0.00 0.00 3.33
117 118 1.202486 CGATATGGGCGTAGTGGTTGT 60.202 52.381 0.00 0.00 0.00 3.32
118 119 1.067974 TCGATATGGGCGTAGTGGTTG 59.932 52.381 0.00 0.00 0.00 3.77
119 120 1.405872 TCGATATGGGCGTAGTGGTT 58.594 50.000 0.00 0.00 0.00 3.67
120 121 1.272490 CATCGATATGGGCGTAGTGGT 59.728 52.381 0.00 0.00 0.00 4.16
121 122 1.996292 CATCGATATGGGCGTAGTGG 58.004 55.000 0.00 0.00 0.00 4.00
131 132 0.738762 CGAGCAGGCCCATCGATATG 60.739 60.000 14.82 0.00 38.72 1.78
132 133 1.593787 CGAGCAGGCCCATCGATAT 59.406 57.895 14.82 0.00 38.72 1.63
133 134 3.051210 CGAGCAGGCCCATCGATA 58.949 61.111 14.82 0.00 38.72 2.92
134 135 4.615815 GCGAGCAGGCCCATCGAT 62.616 66.667 21.99 0.00 38.72 3.59
152 153 0.601558 TGAAGAACTTCCGAGGGACG 59.398 55.000 11.30 0.00 38.77 4.79
153 154 2.613223 CCTTGAAGAACTTCCGAGGGAC 60.613 54.545 18.15 0.00 37.82 4.46
154 155 1.623811 CCTTGAAGAACTTCCGAGGGA 59.376 52.381 18.15 0.00 37.82 4.20
155 156 1.623811 TCCTTGAAGAACTTCCGAGGG 59.376 52.381 22.06 12.26 39.92 4.30
156 157 2.689646 GTCCTTGAAGAACTTCCGAGG 58.310 52.381 19.09 19.09 40.40 4.63
157 158 2.030185 TCGTCCTTGAAGAACTTCCGAG 60.030 50.000 11.30 9.18 38.77 4.63
158 159 1.958579 TCGTCCTTGAAGAACTTCCGA 59.041 47.619 11.30 9.52 38.77 4.55
159 160 2.329379 CTCGTCCTTGAAGAACTTCCG 58.671 52.381 11.30 7.66 38.77 4.30
160 161 2.070028 GCTCGTCCTTGAAGAACTTCC 58.930 52.381 11.30 0.00 38.77 3.46
161 162 3.033368 AGCTCGTCCTTGAAGAACTTC 57.967 47.619 7.51 7.51 39.91 3.01
162 163 3.306156 GGTAGCTCGTCCTTGAAGAACTT 60.306 47.826 0.00 0.00 0.00 2.66
163 164 2.231721 GGTAGCTCGTCCTTGAAGAACT 59.768 50.000 0.00 0.00 0.00 3.01
164 165 2.029290 TGGTAGCTCGTCCTTGAAGAAC 60.029 50.000 0.00 0.00 0.00 3.01
165 166 2.029290 GTGGTAGCTCGTCCTTGAAGAA 60.029 50.000 0.00 0.00 0.00 2.52
166 167 1.544691 GTGGTAGCTCGTCCTTGAAGA 59.455 52.381 0.00 0.00 0.00 2.87
167 168 1.546476 AGTGGTAGCTCGTCCTTGAAG 59.454 52.381 0.00 0.00 0.00 3.02
168 169 1.544691 GAGTGGTAGCTCGTCCTTGAA 59.455 52.381 0.00 0.00 0.00 2.69
169 170 1.174783 GAGTGGTAGCTCGTCCTTGA 58.825 55.000 0.00 0.00 0.00 3.02
170 171 3.723554 GAGTGGTAGCTCGTCCTTG 57.276 57.895 0.00 0.00 0.00 3.61
190 191 3.777925 CTCGCGCCTTGGTGAACG 61.778 66.667 0.00 0.00 0.00 3.95
191 192 3.423154 CCTCGCGCCTTGGTGAAC 61.423 66.667 0.00 0.00 0.00 3.18
206 207 1.341156 GGTAGTGGAGGATGCAGCCT 61.341 60.000 26.67 26.67 36.81 4.58
207 208 1.147153 GGTAGTGGAGGATGCAGCC 59.853 63.158 14.72 14.72 36.81 4.85
208 209 0.543749 AAGGTAGTGGAGGATGCAGC 59.456 55.000 0.00 0.00 36.81 5.25
209 210 1.134280 CCAAGGTAGTGGAGGATGCAG 60.134 57.143 0.00 0.00 36.81 4.41
210 211 0.911769 CCAAGGTAGTGGAGGATGCA 59.088 55.000 0.00 0.00 41.65 3.96
211 212 1.204146 TCCAAGGTAGTGGAGGATGC 58.796 55.000 0.00 0.00 42.97 3.91
224 225 2.034687 CCACTGCCACCTCCAAGG 59.965 66.667 0.00 0.00 42.49 3.61
225 226 2.674380 GCCACTGCCACCTCCAAG 60.674 66.667 0.00 0.00 0.00 3.61
226 227 3.067084 TTGCCACTGCCACCTCCAA 62.067 57.895 0.00 0.00 36.33 3.53
227 228 3.497115 TTGCCACTGCCACCTCCA 61.497 61.111 0.00 0.00 36.33 3.86
228 229 2.985847 GTTGCCACTGCCACCTCC 60.986 66.667 0.00 0.00 36.33 4.30
229 230 2.203337 TGTTGCCACTGCCACCTC 60.203 61.111 0.00 0.00 36.33 3.85
230 231 2.203394 CTGTTGCCACTGCCACCT 60.203 61.111 0.00 0.00 36.33 4.00
231 232 2.519302 ACTGTTGCCACTGCCACC 60.519 61.111 0.00 0.00 36.33 4.61
232 233 2.555547 GGACTGTTGCCACTGCCAC 61.556 63.158 0.00 0.00 36.33 5.01
233 234 2.203337 GGACTGTTGCCACTGCCA 60.203 61.111 0.00 0.00 36.33 4.92
234 235 2.985847 GGGACTGTTGCCACTGCC 60.986 66.667 0.00 0.00 36.33 4.85
235 236 2.985847 GGGGACTGTTGCCACTGC 60.986 66.667 0.00 0.00 33.93 4.40
236 237 2.282462 GGGGGACTGTTGCCACTG 60.282 66.667 0.00 0.00 32.52 3.66
237 238 3.953775 CGGGGGACTGTTGCCACT 61.954 66.667 0.00 0.00 33.31 4.00
241 242 4.280019 AACCCGGGGGACTGTTGC 62.280 66.667 27.92 0.00 38.96 4.17
242 243 2.033602 GAACCCGGGGGACTGTTG 59.966 66.667 27.92 0.00 38.96 3.33
243 244 3.633116 CGAACCCGGGGGACTGTT 61.633 66.667 27.92 8.76 38.96 3.16
244 245 4.626402 TCGAACCCGGGGGACTGT 62.626 66.667 27.92 0.00 38.96 3.55
245 246 3.771160 CTCGAACCCGGGGGACTG 61.771 72.222 27.92 9.88 38.96 3.51
275 276 2.182030 CTCGAACACGAGGCCCTC 59.818 66.667 0.00 0.00 46.33 4.30
282 283 2.687805 CGCTCCTCCTCGAACACGA 61.688 63.158 0.00 0.00 34.81 4.35
283 284 2.202492 CGCTCCTCCTCGAACACG 60.202 66.667 0.00 0.00 0.00 4.49
284 285 2.182030 CCGCTCCTCCTCGAACAC 59.818 66.667 0.00 0.00 0.00 3.32
285 286 2.035155 TCCGCTCCTCCTCGAACA 59.965 61.111 0.00 0.00 0.00 3.18
286 287 2.490685 GTCCGCTCCTCCTCGAAC 59.509 66.667 0.00 0.00 0.00 3.95
287 288 3.132139 CGTCCGCTCCTCCTCGAA 61.132 66.667 0.00 0.00 0.00 3.71
300 301 3.423154 CTTGTTGCCTCGCCGTCC 61.423 66.667 0.00 0.00 0.00 4.79
301 302 4.090057 GCTTGTTGCCTCGCCGTC 62.090 66.667 0.00 0.00 35.15 4.79
302 303 4.927782 TGCTTGTTGCCTCGCCGT 62.928 61.111 0.00 0.00 42.00 5.68
303 304 4.389576 GTGCTTGTTGCCTCGCCG 62.390 66.667 0.00 0.00 42.00 6.46
304 305 4.389576 CGTGCTTGTTGCCTCGCC 62.390 66.667 0.00 0.00 42.00 5.54
306 307 2.027073 TAGCGTGCTTGTTGCCTCG 61.027 57.895 0.00 0.00 42.00 4.63
307 308 1.497722 GTAGCGTGCTTGTTGCCTC 59.502 57.895 0.00 0.00 42.00 4.70
308 309 2.317609 CGTAGCGTGCTTGTTGCCT 61.318 57.895 0.00 0.00 42.00 4.75
309 310 2.173382 CGTAGCGTGCTTGTTGCC 59.827 61.111 0.00 0.00 42.00 4.52
310 311 1.130613 CTCGTAGCGTGCTTGTTGC 59.869 57.895 0.00 0.00 43.25 4.17
311 312 1.130613 GCTCGTAGCGTGCTTGTTG 59.869 57.895 0.00 0.00 42.00 3.33
312 313 3.550656 GCTCGTAGCGTGCTTGTT 58.449 55.556 0.00 0.00 42.00 2.83
349 350 2.879462 GACTTGGCGTACGCGGAG 60.879 66.667 31.78 29.99 43.06 4.63
350 351 4.764336 CGACTTGGCGTACGCGGA 62.764 66.667 31.78 21.62 43.06 5.54
352 353 4.764336 TCCGACTTGGCGTACGCG 62.764 66.667 31.78 21.33 43.06 6.01
353 354 3.177249 GTCCGACTTGGCGTACGC 61.177 66.667 31.54 31.54 37.80 4.42
354 355 2.872925 CGTCCGACTTGGCGTACG 60.873 66.667 11.84 11.84 37.28 3.67
355 356 3.177249 GCGTCCGACTTGGCGTAC 61.177 66.667 0.00 0.00 38.82 3.67
356 357 4.764336 CGCGTCCGACTTGGCGTA 62.764 66.667 10.14 0.00 43.36 4.42
379 380 2.441901 TCATTGCGGGCCCATTCC 60.442 61.111 24.92 7.22 0.00 3.01
380 381 2.785425 GGTCATTGCGGGCCCATTC 61.785 63.158 24.92 10.86 0.00 2.67
381 382 2.759560 GGTCATTGCGGGCCCATT 60.760 61.111 24.92 0.00 0.00 3.16
382 383 4.839706 GGGTCATTGCGGGCCCAT 62.840 66.667 24.92 4.58 40.76 4.00
385 386 4.424711 TCTGGGTCATTGCGGGCC 62.425 66.667 0.00 0.00 0.00 5.80
386 387 3.134127 GTCTGGGTCATTGCGGGC 61.134 66.667 0.00 0.00 0.00 6.13
387 388 2.438434 GGTCTGGGTCATTGCGGG 60.438 66.667 0.00 0.00 0.00 6.13
388 389 1.746615 CAGGTCTGGGTCATTGCGG 60.747 63.158 0.00 0.00 0.00 5.69
389 390 1.746615 CCAGGTCTGGGTCATTGCG 60.747 63.158 9.08 0.00 46.81 4.85
390 391 4.326255 CCAGGTCTGGGTCATTGC 57.674 61.111 9.08 0.00 46.81 3.56
425 426 1.201098 GCGATAGTGACGAAGCGGTC 61.201 60.000 0.00 0.00 37.45 4.79
426 427 1.226603 GCGATAGTGACGAAGCGGT 60.227 57.895 0.00 0.00 39.35 5.68
427 428 3.601981 GCGATAGTGACGAAGCGG 58.398 61.111 0.00 0.00 39.35 5.52
437 438 2.920645 CGGCCATCTCCGCGATAGT 61.921 63.158 8.23 0.00 43.18 2.12
438 439 2.126307 CGGCCATCTCCGCGATAG 60.126 66.667 8.23 4.62 43.18 2.08
465 466 3.386867 CTGTCAAAGCGGCATCGGC 62.387 63.158 1.45 0.00 40.13 5.54
466 467 2.034879 ACTGTCAAAGCGGCATCGG 61.035 57.895 1.45 0.00 36.79 4.18
467 468 1.133253 CACTGTCAAAGCGGCATCG 59.867 57.895 1.45 0.00 39.81 3.84
468 469 0.445436 CTCACTGTCAAAGCGGCATC 59.555 55.000 1.45 0.00 0.00 3.91
469 470 1.580845 GCTCACTGTCAAAGCGGCAT 61.581 55.000 1.45 0.00 0.00 4.40
470 471 2.253758 GCTCACTGTCAAAGCGGCA 61.254 57.895 1.45 0.00 0.00 5.69
471 472 1.905922 GAGCTCACTGTCAAAGCGGC 61.906 60.000 9.40 0.00 40.95 6.53
472 473 1.621301 CGAGCTCACTGTCAAAGCGG 61.621 60.000 15.40 0.00 40.95 5.52
473 474 1.777819 CGAGCTCACTGTCAAAGCG 59.222 57.895 15.40 0.00 40.95 4.68
474 475 1.495069 GCGAGCTCACTGTCAAAGC 59.505 57.895 15.40 1.33 36.27 3.51
475 476 0.320247 AGGCGAGCTCACTGTCAAAG 60.320 55.000 15.40 0.00 0.00 2.77
476 477 0.966179 TAGGCGAGCTCACTGTCAAA 59.034 50.000 15.40 0.00 0.00 2.69
477 478 0.528017 CTAGGCGAGCTCACTGTCAA 59.472 55.000 15.40 0.00 0.00 3.18
478 479 0.322546 TCTAGGCGAGCTCACTGTCA 60.323 55.000 15.40 0.00 0.00 3.58
479 480 1.001815 GATCTAGGCGAGCTCACTGTC 60.002 57.143 15.40 0.00 0.00 3.51
480 481 1.028905 GATCTAGGCGAGCTCACTGT 58.971 55.000 15.40 2.50 0.00 3.55
481 482 0.040514 CGATCTAGGCGAGCTCACTG 60.041 60.000 15.40 6.54 0.00 3.66
482 483 1.169661 CCGATCTAGGCGAGCTCACT 61.170 60.000 15.40 13.49 0.00 3.41
483 484 1.284408 CCGATCTAGGCGAGCTCAC 59.716 63.158 15.40 3.30 0.00 3.51
484 485 3.751342 CCGATCTAGGCGAGCTCA 58.249 61.111 15.40 0.00 0.00 4.26
492 493 1.519751 CCACTCCTCGCCGATCTAGG 61.520 65.000 0.00 0.00 0.00 3.02
493 494 0.820074 ACCACTCCTCGCCGATCTAG 60.820 60.000 0.00 0.00 0.00 2.43
494 495 0.818445 GACCACTCCTCGCCGATCTA 60.818 60.000 0.00 0.00 0.00 1.98
495 496 2.043852 ACCACTCCTCGCCGATCT 60.044 61.111 0.00 0.00 0.00 2.75
496 497 2.413765 GACCACTCCTCGCCGATC 59.586 66.667 0.00 0.00 0.00 3.69
497 498 3.518998 CGACCACTCCTCGCCGAT 61.519 66.667 0.00 0.00 0.00 4.18
502 503 1.226717 GCTAAGCGACCACTCCTCG 60.227 63.158 0.00 0.00 0.00 4.63
503 504 4.816990 GCTAAGCGACCACTCCTC 57.183 61.111 0.00 0.00 0.00 3.71
526 527 1.165270 CTTTGCCCTTGTTACCGGAG 58.835 55.000 9.46 0.00 0.00 4.63
527 528 0.891904 GCTTTGCCCTTGTTACCGGA 60.892 55.000 9.46 0.00 0.00 5.14
528 529 1.584495 GCTTTGCCCTTGTTACCGG 59.416 57.895 0.00 0.00 0.00 5.28
529 530 1.584495 GGCTTTGCCCTTGTTACCG 59.416 57.895 0.00 0.00 44.06 4.02
564 565 3.419759 AACCAATGTCGACGGCGC 61.420 61.111 5.31 0.00 37.46 6.53
565 566 2.314647 ACAACCAATGTCGACGGCG 61.315 57.895 2.87 2.87 37.96 6.46
566 567 1.206578 CACAACCAATGTCGACGGC 59.793 57.895 11.62 0.00 41.46 5.68
567 568 1.866237 CCACAACCAATGTCGACGG 59.134 57.895 11.62 8.77 41.46 4.79
568 569 1.206578 GCCACAACCAATGTCGACG 59.793 57.895 11.62 0.00 41.46 5.12
569 570 0.881118 ATGCCACAACCAATGTCGAC 59.119 50.000 9.11 9.11 41.46 4.20
570 571 1.164411 GATGCCACAACCAATGTCGA 58.836 50.000 0.00 0.00 41.46 4.20
571 572 0.171007 GGATGCCACAACCAATGTCG 59.829 55.000 0.00 0.00 41.46 4.35
572 573 0.532115 GGGATGCCACAACCAATGTC 59.468 55.000 0.00 0.00 41.46 3.06
573 574 0.114954 AGGGATGCCACAACCAATGT 59.885 50.000 5.86 0.00 45.34 2.71
574 575 0.819582 GAGGGATGCCACAACCAATG 59.180 55.000 5.86 0.00 0.00 2.82
575 576 0.706433 AGAGGGATGCCACAACCAAT 59.294 50.000 5.86 0.00 0.00 3.16
576 577 0.251297 CAGAGGGATGCCACAACCAA 60.251 55.000 5.86 0.00 0.00 3.67
577 578 1.379916 CAGAGGGATGCCACAACCA 59.620 57.895 5.86 0.00 0.00 3.67
578 579 2.048603 GCAGAGGGATGCCACAACC 61.049 63.158 5.86 0.00 40.43 3.77
579 580 1.303561 TGCAGAGGGATGCCACAAC 60.304 57.895 5.86 0.00 45.91 3.32
580 581 1.303561 GTGCAGAGGGATGCCACAA 60.304 57.895 5.86 0.00 45.91 3.33
581 582 2.226315 AGTGCAGAGGGATGCCACA 61.226 57.895 5.86 0.00 45.91 4.17
582 583 1.748122 CAGTGCAGAGGGATGCCAC 60.748 63.158 5.86 0.00 45.91 5.01
583 584 2.672908 CAGTGCAGAGGGATGCCA 59.327 61.111 5.86 0.00 45.91 4.92
584 585 2.827642 GCAGTGCAGAGGGATGCC 60.828 66.667 11.09 0.00 45.91 4.40
585 586 3.200593 CGCAGTGCAGAGGGATGC 61.201 66.667 16.83 0.00 46.68 3.91
586 587 3.200593 GCGCAGTGCAGAGGGATG 61.201 66.667 16.83 0.00 45.45 3.51
595 596 3.123620 CTTCCTCCTGCGCAGTGC 61.124 66.667 33.75 4.58 46.70 4.40
596 597 3.123620 GCTTCCTCCTGCGCAGTG 61.124 66.667 33.75 24.73 0.00 3.66
597 598 4.749310 CGCTTCCTCCTGCGCAGT 62.749 66.667 33.75 0.00 45.50 4.40
639 640 3.600898 AACCTTGTCCGGCCGTAGC 62.601 63.158 26.12 13.97 38.76 3.58
640 641 1.740296 CAACCTTGTCCGGCCGTAG 60.740 63.158 26.12 14.88 0.00 3.51
641 642 2.344500 CAACCTTGTCCGGCCGTA 59.656 61.111 26.12 4.86 0.00 4.02
647 648 3.283684 TTGCGGCAACCTTGTCCG 61.284 61.111 12.11 13.33 44.70 4.79
648 649 2.335011 GTTGCGGCAACCTTGTCC 59.665 61.111 30.48 7.94 38.30 4.02
662 663 3.697747 TAGGGCGTCGGTGGGTTG 61.698 66.667 0.00 0.00 0.00 3.77
663 664 3.698820 GTAGGGCGTCGGTGGGTT 61.699 66.667 0.00 0.00 0.00 4.11
684 685 4.477975 GTCGTCGTCCCTCCAGCG 62.478 72.222 0.00 0.00 0.00 5.18
685 686 4.477975 CGTCGTCGTCCCTCCAGC 62.478 72.222 0.00 0.00 0.00 4.85
686 687 2.113433 ATCGTCGTCGTCCCTCCAG 61.113 63.158 1.33 0.00 38.33 3.86
687 688 2.045634 ATCGTCGTCGTCCCTCCA 60.046 61.111 1.33 0.00 38.33 3.86
688 689 2.110967 TCATCGTCGTCGTCCCTCC 61.111 63.158 1.33 0.00 38.33 4.30
689 690 1.062206 GTCATCGTCGTCGTCCCTC 59.938 63.158 1.33 0.00 38.33 4.30
690 691 2.747822 CGTCATCGTCGTCGTCCCT 61.748 63.158 1.33 0.00 38.33 4.20
691 692 2.277120 CGTCATCGTCGTCGTCCC 60.277 66.667 1.33 0.00 38.33 4.46
692 693 1.579626 GTCGTCATCGTCGTCGTCC 60.580 63.158 1.33 0.00 38.33 4.79
693 694 0.451628 TTGTCGTCATCGTCGTCGTC 60.452 55.000 1.33 0.00 38.33 4.20
694 695 0.723790 GTTGTCGTCATCGTCGTCGT 60.724 55.000 1.33 0.00 38.33 4.34
695 696 0.723459 TGTTGTCGTCATCGTCGTCG 60.723 55.000 0.00 0.00 38.33 5.12
696 697 0.701303 GTGTTGTCGTCATCGTCGTC 59.299 55.000 0.00 0.00 38.33 4.20
697 698 0.995234 CGTGTTGTCGTCATCGTCGT 60.995 55.000 0.00 0.00 38.33 4.34
698 699 1.661948 CCGTGTTGTCGTCATCGTCG 61.662 60.000 0.00 0.00 38.33 5.12
699 700 0.386352 TCCGTGTTGTCGTCATCGTC 60.386 55.000 0.00 0.00 38.33 4.20
700 701 0.662374 GTCCGTGTTGTCGTCATCGT 60.662 55.000 0.00 0.00 38.33 3.73
701 702 0.662077 TGTCCGTGTTGTCGTCATCG 60.662 55.000 0.00 0.00 38.55 3.84
702 703 1.191647 GTTGTCCGTGTTGTCGTCATC 59.808 52.381 0.00 0.00 0.00 2.92
703 704 1.214367 GTTGTCCGTGTTGTCGTCAT 58.786 50.000 0.00 0.00 0.00 3.06
704 705 1.140999 CGTTGTCCGTGTTGTCGTCA 61.141 55.000 0.00 0.00 0.00 4.35
705 706 0.866906 TCGTTGTCCGTGTTGTCGTC 60.867 55.000 0.00 0.00 37.94 4.20
706 707 0.249155 ATCGTTGTCCGTGTTGTCGT 60.249 50.000 0.00 0.00 37.94 4.34
707 708 0.160813 CATCGTTGTCCGTGTTGTCG 59.839 55.000 0.00 0.00 37.94 4.35
708 709 0.511221 CCATCGTTGTCCGTGTTGTC 59.489 55.000 0.00 0.00 37.94 3.18
709 710 1.503818 GCCATCGTTGTCCGTGTTGT 61.504 55.000 0.00 0.00 37.94 3.32
710 711 1.206578 GCCATCGTTGTCCGTGTTG 59.793 57.895 0.00 0.00 37.94 3.33
711 712 2.314647 CGCCATCGTTGTCCGTGTT 61.315 57.895 0.00 0.00 37.94 3.32
712 713 2.736995 CGCCATCGTTGTCCGTGT 60.737 61.111 0.00 0.00 37.94 4.49
713 714 3.487202 CCGCCATCGTTGTCCGTG 61.487 66.667 0.00 0.00 37.94 4.94
714 715 3.998672 ACCGCCATCGTTGTCCGT 61.999 61.111 0.00 0.00 37.94 4.69
715 716 3.487202 CACCGCCATCGTTGTCCG 61.487 66.667 0.00 0.00 38.13 4.79
716 717 3.799755 GCACCGCCATCGTTGTCC 61.800 66.667 0.00 0.00 30.35 4.02
717 718 4.147322 CGCACCGCCATCGTTGTC 62.147 66.667 0.00 0.00 30.35 3.18
742 743 4.849310 ATAACGCATGGCCGCCGT 62.849 61.111 4.58 9.03 36.68 5.68
743 744 3.119709 AAATAACGCATGGCCGCCG 62.120 57.895 4.58 2.70 0.00 6.46
744 745 1.588667 CAAATAACGCATGGCCGCC 60.589 57.895 1.04 1.04 0.00 6.13
745 746 0.179150 TTCAAATAACGCATGGCCGC 60.179 50.000 0.00 0.00 0.00 6.53
746 747 2.270275 TTTCAAATAACGCATGGCCG 57.730 45.000 0.00 0.00 0.00 6.13
747 748 3.520569 ACATTTCAAATAACGCATGGCC 58.479 40.909 0.00 0.00 0.00 5.36
748 749 6.915300 TGTATACATTTCAAATAACGCATGGC 59.085 34.615 0.08 0.00 0.00 4.40
769 770 9.216117 GAGCCGGTTATTCAAAACTATATGTAT 57.784 33.333 1.90 0.00 0.00 2.29
770 771 7.658575 GGAGCCGGTTATTCAAAACTATATGTA 59.341 37.037 1.90 0.00 0.00 2.29
771 772 6.485648 GGAGCCGGTTATTCAAAACTATATGT 59.514 38.462 1.90 0.00 0.00 2.29
772 773 6.710744 AGGAGCCGGTTATTCAAAACTATATG 59.289 38.462 1.90 0.00 0.00 1.78
773 774 6.710744 CAGGAGCCGGTTATTCAAAACTATAT 59.289 38.462 1.90 0.00 0.00 0.86
774 775 6.053005 CAGGAGCCGGTTATTCAAAACTATA 58.947 40.000 1.90 0.00 0.00 1.31
775 776 4.881850 CAGGAGCCGGTTATTCAAAACTAT 59.118 41.667 1.90 0.00 0.00 2.12
776 777 4.258543 CAGGAGCCGGTTATTCAAAACTA 58.741 43.478 1.90 0.00 0.00 2.24
777 778 3.081804 CAGGAGCCGGTTATTCAAAACT 58.918 45.455 1.90 0.00 0.00 2.66
778 779 2.817844 ACAGGAGCCGGTTATTCAAAAC 59.182 45.455 1.90 0.00 0.00 2.43
779 780 3.149005 ACAGGAGCCGGTTATTCAAAA 57.851 42.857 1.90 0.00 0.00 2.44
780 781 2.871096 ACAGGAGCCGGTTATTCAAA 57.129 45.000 1.90 0.00 0.00 2.69
781 782 4.497291 AATACAGGAGCCGGTTATTCAA 57.503 40.909 1.90 0.00 0.00 2.69
782 783 4.196193 CAAATACAGGAGCCGGTTATTCA 58.804 43.478 1.90 0.00 0.00 2.57
783 784 4.035208 CACAAATACAGGAGCCGGTTATTC 59.965 45.833 1.90 0.00 0.00 1.75
784 785 3.945285 CACAAATACAGGAGCCGGTTATT 59.055 43.478 1.90 0.00 0.00 1.40
785 786 3.054655 ACACAAATACAGGAGCCGGTTAT 60.055 43.478 1.90 0.00 0.00 1.89
786 787 2.303600 ACACAAATACAGGAGCCGGTTA 59.696 45.455 1.90 0.00 0.00 2.85
787 788 1.073284 ACACAAATACAGGAGCCGGTT 59.927 47.619 1.90 0.00 0.00 4.44
788 789 0.690762 ACACAAATACAGGAGCCGGT 59.309 50.000 1.90 0.00 0.00 5.28
789 790 1.369625 GACACAAATACAGGAGCCGG 58.630 55.000 0.00 0.00 0.00 6.13
790 791 1.338674 TGGACACAAATACAGGAGCCG 60.339 52.381 0.00 0.00 0.00 5.52
791 792 2.489938 TGGACACAAATACAGGAGCC 57.510 50.000 0.00 0.00 0.00 4.70
792 793 4.811557 GTCTATGGACACAAATACAGGAGC 59.188 45.833 4.04 0.00 41.75 4.70
793 794 5.360591 GGTCTATGGACACAAATACAGGAG 58.639 45.833 11.67 0.00 43.77 3.69
794 795 4.142026 CGGTCTATGGACACAAATACAGGA 60.142 45.833 11.67 0.00 43.77 3.86
795 796 4.119862 CGGTCTATGGACACAAATACAGG 58.880 47.826 11.67 0.00 43.77 4.00
796 797 4.119862 CCGGTCTATGGACACAAATACAG 58.880 47.826 11.67 0.00 43.77 2.74
797 798 3.516300 ACCGGTCTATGGACACAAATACA 59.484 43.478 11.67 0.00 43.77 2.29
798 799 4.117685 GACCGGTCTATGGACACAAATAC 58.882 47.826 27.64 0.00 43.77 1.89
799 800 4.028131 AGACCGGTCTATGGACACAAATA 58.972 43.478 35.59 0.00 43.77 1.40
800 801 2.838202 AGACCGGTCTATGGACACAAAT 59.162 45.455 35.59 6.84 43.77 2.32
801 802 2.232941 GAGACCGGTCTATGGACACAAA 59.767 50.000 36.38 0.00 43.77 2.83
802 803 1.822990 GAGACCGGTCTATGGACACAA 59.177 52.381 36.38 0.00 43.77 3.33
803 804 1.471119 GAGACCGGTCTATGGACACA 58.529 55.000 36.38 0.00 43.77 3.72
804 805 0.381089 CGAGACCGGTCTATGGACAC 59.619 60.000 36.38 20.61 43.77 3.67
805 806 1.381928 GCGAGACCGGTCTATGGACA 61.382 60.000 36.38 0.00 43.77 4.02
806 807 1.359475 GCGAGACCGGTCTATGGAC 59.641 63.158 36.38 22.05 40.61 4.02
807 808 1.826921 GGCGAGACCGGTCTATGGA 60.827 63.158 36.38 0.00 40.61 3.41
808 809 1.392710 AAGGCGAGACCGGTCTATGG 61.393 60.000 36.38 26.93 46.52 2.74
809 810 0.030908 GAAGGCGAGACCGGTCTATG 59.969 60.000 36.38 29.85 46.52 2.23
810 811 1.108132 GGAAGGCGAGACCGGTCTAT 61.108 60.000 36.38 17.30 46.52 1.98
811 812 1.751927 GGAAGGCGAGACCGGTCTA 60.752 63.158 36.38 0.00 46.52 2.59
812 813 3.069318 GGAAGGCGAGACCGGTCT 61.069 66.667 36.89 36.89 46.52 3.85
813 814 1.389609 TATGGAAGGCGAGACCGGTC 61.390 60.000 27.67 27.67 46.52 4.79
814 815 0.974010 TTATGGAAGGCGAGACCGGT 60.974 55.000 6.92 6.92 46.52 5.28
815 816 0.177141 TTTATGGAAGGCGAGACCGG 59.823 55.000 0.00 0.00 46.52 5.28
816 817 1.287425 GTTTATGGAAGGCGAGACCG 58.713 55.000 0.00 0.00 46.52 4.79
817 818 1.134907 TCGTTTATGGAAGGCGAGACC 60.135 52.381 0.00 0.00 39.61 3.85
818 819 2.288961 TCGTTTATGGAAGGCGAGAC 57.711 50.000 0.00 0.00 0.00 3.36
819 820 3.536956 ATTCGTTTATGGAAGGCGAGA 57.463 42.857 0.00 0.00 33.09 4.04
820 821 4.116961 TGTATTCGTTTATGGAAGGCGAG 58.883 43.478 0.00 0.00 33.09 5.03
821 822 4.116961 CTGTATTCGTTTATGGAAGGCGA 58.883 43.478 0.00 0.00 0.00 5.54
822 823 3.869246 ACTGTATTCGTTTATGGAAGGCG 59.131 43.478 0.00 0.00 0.00 5.52
823 824 6.128902 CGATACTGTATTCGTTTATGGAAGGC 60.129 42.308 1.22 0.00 0.00 4.35
824 825 6.921857 ACGATACTGTATTCGTTTATGGAAGG 59.078 38.462 14.91 0.00 35.08 3.46
825 826 7.925703 ACGATACTGTATTCGTTTATGGAAG 57.074 36.000 14.91 0.00 35.08 3.46
826 827 7.975058 TCAACGATACTGTATTCGTTTATGGAA 59.025 33.333 22.97 10.75 44.83 3.53
827 828 7.482474 TCAACGATACTGTATTCGTTTATGGA 58.518 34.615 22.97 17.68 44.83 3.41
828 829 7.646526 TCTCAACGATACTGTATTCGTTTATGG 59.353 37.037 22.97 16.47 44.83 2.74
829 830 8.556517 TCTCAACGATACTGTATTCGTTTATG 57.443 34.615 22.97 17.28 44.83 1.90
830 831 9.181805 CATCTCAACGATACTGTATTCGTTTAT 57.818 33.333 22.97 17.24 44.83 1.40
831 832 7.166970 GCATCTCAACGATACTGTATTCGTTTA 59.833 37.037 22.97 18.08 44.83 2.01
832 833 6.019801 GCATCTCAACGATACTGTATTCGTTT 60.020 38.462 22.97 13.43 44.83 3.60
834 835 4.976731 GCATCTCAACGATACTGTATTCGT 59.023 41.667 14.91 14.91 40.76 3.85
835 836 4.383052 GGCATCTCAACGATACTGTATTCG 59.617 45.833 1.22 9.32 0.00 3.34
836 837 4.686554 GGGCATCTCAACGATACTGTATTC 59.313 45.833 1.22 0.00 0.00 1.75
837 838 4.345257 AGGGCATCTCAACGATACTGTATT 59.655 41.667 1.22 0.00 0.00 1.89
838 839 3.898123 AGGGCATCTCAACGATACTGTAT 59.102 43.478 0.00 0.00 0.00 2.29
839 840 3.296854 AGGGCATCTCAACGATACTGTA 58.703 45.455 0.00 0.00 0.00 2.74
840 841 2.111384 AGGGCATCTCAACGATACTGT 58.889 47.619 0.00 0.00 0.00 3.55
841 842 2.898729 AGGGCATCTCAACGATACTG 57.101 50.000 0.00 0.00 0.00 2.74
842 843 3.069729 GGTTAGGGCATCTCAACGATACT 59.930 47.826 0.00 0.00 0.00 2.12
843 844 3.391049 GGTTAGGGCATCTCAACGATAC 58.609 50.000 0.00 0.00 0.00 2.24
844 845 2.035449 CGGTTAGGGCATCTCAACGATA 59.965 50.000 0.00 0.00 0.00 2.92
845 846 1.202533 CGGTTAGGGCATCTCAACGAT 60.203 52.381 0.00 0.00 0.00 3.73
846 847 0.174845 CGGTTAGGGCATCTCAACGA 59.825 55.000 0.00 0.00 0.00 3.85
847 848 0.108329 ACGGTTAGGGCATCTCAACG 60.108 55.000 0.00 0.00 0.00 4.10
848 849 1.066430 TCACGGTTAGGGCATCTCAAC 60.066 52.381 0.00 0.00 0.00 3.18
849 850 1.207089 CTCACGGTTAGGGCATCTCAA 59.793 52.381 0.00 0.00 0.00 3.02
850 851 0.824109 CTCACGGTTAGGGCATCTCA 59.176 55.000 0.00 0.00 0.00 3.27
851 852 1.112113 TCTCACGGTTAGGGCATCTC 58.888 55.000 0.00 0.00 0.00 2.75
852 853 0.824759 GTCTCACGGTTAGGGCATCT 59.175 55.000 0.00 0.00 0.00 2.90
853 854 0.179081 GGTCTCACGGTTAGGGCATC 60.179 60.000 0.00 0.00 0.00 3.91
854 855 0.907704 TGGTCTCACGGTTAGGGCAT 60.908 55.000 0.00 0.00 0.00 4.40
855 856 1.534476 TGGTCTCACGGTTAGGGCA 60.534 57.895 0.00 0.00 0.00 5.36
856 857 1.218316 CTGGTCTCACGGTTAGGGC 59.782 63.158 0.00 0.00 0.00 5.19
857 858 0.903454 ACCTGGTCTCACGGTTAGGG 60.903 60.000 0.00 0.00 0.00 3.53
858 859 0.531200 GACCTGGTCTCACGGTTAGG 59.469 60.000 19.53 0.00 0.00 2.69
859 860 0.170561 CGACCTGGTCTCACGGTTAG 59.829 60.000 23.49 1.96 0.00 2.34
860 861 0.538057 ACGACCTGGTCTCACGGTTA 60.538 55.000 23.49 0.00 0.00 2.85
861 862 0.538057 TACGACCTGGTCTCACGGTT 60.538 55.000 23.49 0.26 0.00 4.44
862 863 0.959372 CTACGACCTGGTCTCACGGT 60.959 60.000 23.49 15.67 0.00 4.83
863 864 0.959372 ACTACGACCTGGTCTCACGG 60.959 60.000 23.49 10.74 0.00 4.94
864 865 1.730501 TACTACGACCTGGTCTCACG 58.269 55.000 23.49 13.94 0.00 4.35
865 866 7.502120 TTATTATACTACGACCTGGTCTCAC 57.498 40.000 23.49 0.00 0.00 3.51
866 867 8.523915 TTTTATTATACTACGACCTGGTCTCA 57.476 34.615 23.49 10.61 0.00 3.27
891 892 4.792068 TGAAGACACTCACAGGGATTTTT 58.208 39.130 0.00 0.00 0.00 1.94
892 893 4.392940 CTGAAGACACTCACAGGGATTTT 58.607 43.478 0.00 0.00 0.00 1.82
893 894 3.808618 GCTGAAGACACTCACAGGGATTT 60.809 47.826 0.00 0.00 0.00 2.17
894 895 2.289945 GCTGAAGACACTCACAGGGATT 60.290 50.000 0.00 0.00 0.00 3.01
895 896 1.277557 GCTGAAGACACTCACAGGGAT 59.722 52.381 0.00 0.00 0.00 3.85
896 897 0.681733 GCTGAAGACACTCACAGGGA 59.318 55.000 0.00 0.00 0.00 4.20
897 898 0.394192 TGCTGAAGACACTCACAGGG 59.606 55.000 0.00 0.00 0.00 4.45
898 899 1.069823 AGTGCTGAAGACACTCACAGG 59.930 52.381 0.00 0.00 45.06 4.00
899 900 2.522836 AGTGCTGAAGACACTCACAG 57.477 50.000 0.00 0.00 45.06 3.66
917 918 2.224621 TGGCTTGGAGTTCTCCTTTGAG 60.225 50.000 18.07 11.89 40.17 3.02
1019 1023 1.003233 GGTGAGAAGGTGAGGTGGC 60.003 63.158 0.00 0.00 0.00 5.01
1020 1024 1.293498 CGGTGAGAAGGTGAGGTGG 59.707 63.158 0.00 0.00 0.00 4.61
1021 1025 1.374758 GCGGTGAGAAGGTGAGGTG 60.375 63.158 0.00 0.00 0.00 4.00
1432 1439 0.034059 CCTGTGAAGCTGACCTCGTT 59.966 55.000 0.00 0.00 0.00 3.85
1557 1564 1.555967 GGAAGAGCTGAGAGACCAGT 58.444 55.000 0.00 0.00 36.57 4.00
1893 1900 1.922447 ACAGCACCCCCAATGAGAATA 59.078 47.619 0.00 0.00 0.00 1.75
2097 2104 0.756294 TGTCTTCCAACTGCTTCGGA 59.244 50.000 0.00 0.00 0.00 4.55
2136 2143 6.199719 CACTTCCTTGCTTCATTGAAAAACTC 59.800 38.462 0.01 0.00 0.00 3.01
2139 2146 5.811613 CACACTTCCTTGCTTCATTGAAAAA 59.188 36.000 0.01 0.00 0.00 1.94
2145 2152 3.152341 CTCCACACTTCCTTGCTTCATT 58.848 45.455 0.00 0.00 0.00 2.57
2146 2153 2.107204 ACTCCACACTTCCTTGCTTCAT 59.893 45.455 0.00 0.00 0.00 2.57
2147 2154 1.490490 ACTCCACACTTCCTTGCTTCA 59.510 47.619 0.00 0.00 0.00 3.02
2204 2211 0.601841 CGCCAACGTAAGAACCACCT 60.602 55.000 0.00 0.00 43.62 4.00
2205 2212 1.571215 CCGCCAACGTAAGAACCACC 61.571 60.000 0.00 0.00 43.62 4.61
2206 2213 0.881600 ACCGCCAACGTAAGAACCAC 60.882 55.000 0.00 0.00 43.62 4.16
2316 2323 0.554792 CAGGAGGCAGGATCCCAAAT 59.445 55.000 8.55 0.00 37.57 2.32
2359 2366 7.503902 GCCTAATGATCATTACCTCTTTTTCCT 59.496 37.037 21.67 0.00 32.50 3.36
2416 2423 8.425703 GCTCTTATATTTCTTTACAGAGGGAGT 58.574 37.037 0.00 0.00 0.00 3.85
2417 2424 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
2418 2425 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
2419 2426 7.210873 ACGCTCTTATATTTCTTTACAGAGGG 58.789 38.462 8.36 8.36 42.53 4.30
2420 2427 8.649973 AACGCTCTTATATTTCTTTACAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
2435 2442 8.688151 ACTCTTAAGTGATCTAAACGCTCTTAT 58.312 33.333 11.37 0.00 33.32 1.73
2436 2443 8.053026 ACTCTTAAGTGATCTAAACGCTCTTA 57.947 34.615 11.37 0.00 33.32 2.10
2437 2444 6.926313 ACTCTTAAGTGATCTAAACGCTCTT 58.074 36.000 11.37 0.00 33.32 2.85
2438 2445 6.518208 ACTCTTAAGTGATCTAAACGCTCT 57.482 37.500 11.37 0.00 33.32 4.09
2439 2446 6.411492 CGTACTCTTAAGTGATCTAAACGCTC 59.589 42.308 11.37 0.00 36.92 5.03
2440 2447 6.128063 ACGTACTCTTAAGTGATCTAAACGCT 60.128 38.462 11.37 0.00 36.92 5.07
2441 2448 6.026513 ACGTACTCTTAAGTGATCTAAACGC 58.973 40.000 11.37 0.00 36.92 4.84
2442 2449 8.386606 AGTACGTACTCTTAAGTGATCTAAACG 58.613 37.037 22.45 11.49 36.92 3.60
2443 2450 9.488124 CAGTACGTACTCTTAAGTGATCTAAAC 57.512 37.037 25.10 0.00 36.92 2.01
2444 2451 9.224267 ACAGTACGTACTCTTAAGTGATCTAAA 57.776 33.333 25.10 0.00 36.92 1.85
2445 2452 8.783833 ACAGTACGTACTCTTAAGTGATCTAA 57.216 34.615 25.10 0.00 36.92 2.10
2446 2453 9.307121 GTACAGTACGTACTCTTAAGTGATCTA 57.693 37.037 25.10 2.32 46.01 1.98
2447 2454 8.195617 GTACAGTACGTACTCTTAAGTGATCT 57.804 38.462 25.10 0.00 46.01 2.75
2461 2468 5.585844 TGCTGCTAACTATGTACAGTACGTA 59.414 40.000 11.48 11.48 0.00 3.57
2462 2469 4.397103 TGCTGCTAACTATGTACAGTACGT 59.603 41.667 10.37 10.37 0.00 3.57
2463 2470 4.916870 TGCTGCTAACTATGTACAGTACG 58.083 43.478 0.33 0.00 0.00 3.67
2464 2471 6.201044 CCAATGCTGCTAACTATGTACAGTAC 59.799 42.308 0.33 3.49 0.00 2.73
2575 2584 5.048507 GCGTAAGTTAGGAACCCTGATTAG 58.951 45.833 6.77 0.00 41.68 1.73
2600 2609 2.371841 ACGGATATGAGCCAAGGCATTA 59.628 45.455 14.40 2.21 44.88 1.90
2613 2622 0.514255 CAGCAATGCCGACGGATATG 59.486 55.000 20.50 13.14 0.00 1.78
2664 2673 6.698008 ACATCAGACAATTGTTGACAAGAA 57.302 33.333 13.36 0.00 39.47 2.52
2666 2675 6.497437 TGAACATCAGACAATTGTTGACAAG 58.503 36.000 13.36 12.81 39.47 3.16
2667 2676 6.448207 TGAACATCAGACAATTGTTGACAA 57.552 33.333 13.36 0.00 40.51 3.18
2668 2677 6.127786 TGTTGAACATCAGACAATTGTTGACA 60.128 34.615 13.36 9.72 33.92 3.58
2669 2678 6.264832 TGTTGAACATCAGACAATTGTTGAC 58.735 36.000 13.36 0.00 33.92 3.18
2670 2679 6.095300 ACTGTTGAACATCAGACAATTGTTGA 59.905 34.615 13.36 16.98 33.92 3.18
2671 2680 6.267817 ACTGTTGAACATCAGACAATTGTTG 58.732 36.000 13.36 9.42 33.92 3.33
2672 2681 6.455360 ACTGTTGAACATCAGACAATTGTT 57.545 33.333 13.36 0.00 36.34 2.83
2706 2718 4.326826 TGGAGCCATTTGAGTCAGTTAAG 58.673 43.478 0.00 0.00 0.00 1.85
2750 2762 6.364165 GCGTCACAACTAGTAACAATAGACAA 59.636 38.462 0.00 0.00 0.00 3.18
2754 2767 4.565564 GGGCGTCACAACTAGTAACAATAG 59.434 45.833 0.00 0.00 0.00 1.73
2755 2768 4.497300 GGGCGTCACAACTAGTAACAATA 58.503 43.478 0.00 0.00 0.00 1.90
2760 2773 0.609662 GGGGGCGTCACAACTAGTAA 59.390 55.000 0.00 0.00 0.00 2.24
2762 2775 2.939261 CGGGGGCGTCACAACTAGT 61.939 63.158 0.00 0.00 0.00 2.57
2763 2776 1.956629 ATCGGGGGCGTCACAACTAG 61.957 60.000 0.00 0.00 0.00 2.57
2764 2777 1.546589 AATCGGGGGCGTCACAACTA 61.547 55.000 0.00 0.00 0.00 2.24
2765 2778 2.406002 AAATCGGGGGCGTCACAACT 62.406 55.000 0.00 0.00 0.00 3.16
2766 2779 1.969589 AAATCGGGGGCGTCACAAC 60.970 57.895 0.00 0.00 0.00 3.32
2840 2853 8.774586 GTTGTAGAGTTGTGTTGTGATATCTTT 58.225 33.333 3.98 0.00 0.00 2.52
2969 2982 7.704899 GGCAAACTTGTTTAACTTATGTCTGTT 59.295 33.333 0.00 0.00 0.00 3.16
3456 3475 7.663043 AGTTAATAAAACACACCCTTCCAAA 57.337 32.000 0.00 0.00 0.00 3.28
3479 3498 6.040616 ACCTTATGACAACTAGAACCGGATAG 59.959 42.308 9.46 10.02 0.00 2.08
3922 3942 5.869888 ACGAGTTCTTGGTATTTGATCTGAC 59.130 40.000 0.00 0.00 0.00 3.51
4847 4904 0.315251 TGGTCAGCGAGTCTGTTGAG 59.685 55.000 0.00 0.00 43.32 3.02
4946 5003 2.369203 GCCCACCCCTCTAATTAGACTC 59.631 54.545 11.24 0.00 0.00 3.36
5326 5426 3.528370 CGCCTAGCCGCACCTACT 61.528 66.667 0.00 0.00 0.00 2.57
5449 5549 1.235724 GTAGCGCCAAACCAGAAAGT 58.764 50.000 2.29 0.00 0.00 2.66
5489 5589 2.009888 GCTAGCTGTAGCCGCAAAG 58.990 57.895 7.70 0.00 45.37 2.77
5769 5869 1.069500 CGTTGCCGTTTACTCCCTTTG 60.069 52.381 0.00 0.00 0.00 2.77
5786 5886 0.688087 CCTCCTAGCCCTCTTCCGTT 60.688 60.000 0.00 0.00 0.00 4.44
5905 6018 2.031163 GCCACTGCAACGACCTCT 59.969 61.111 0.00 0.00 37.47 3.69
6718 6872 1.064505 GATGCCACGTCACCATGATTG 59.935 52.381 0.00 0.00 0.00 2.67
6776 6930 7.391620 TGAAGTATAAAAGGGAACTAGTGTGG 58.608 38.462 0.00 0.00 42.68 4.17
6786 6940 7.601508 GTCTCGAAACTTGAAGTATAAAAGGGA 59.398 37.037 0.00 0.00 0.00 4.20
6802 6956 4.192317 ACAAAGCAGAAAGTCTCGAAACT 58.808 39.130 0.00 0.00 0.00 2.66
6825 6979 1.075374 TCCTGTGGAAACAAGGATGGG 59.925 52.381 0.00 0.00 46.06 4.00
6914 7068 4.929808 AGCCACTCTTCAACTTTATACACG 59.070 41.667 0.00 0.00 0.00 4.49
6928 7082 5.491982 CAAGTTATAGAACCAGCCACTCTT 58.508 41.667 0.00 0.00 36.08 2.85
6976 7131 2.017049 GCTGTGTGGAAACTCAACAGT 58.983 47.619 0.00 0.00 36.38 3.55
7123 7279 8.152898 ACATATACTGAATGCAAGCTCAGATAA 58.847 33.333 23.25 12.52 41.38 1.75
7128 7284 5.673514 TCACATATACTGAATGCAAGCTCA 58.326 37.500 0.00 0.00 0.00 4.26
7132 7288 7.933396 TCCAAATCACATATACTGAATGCAAG 58.067 34.615 0.00 0.00 0.00 4.01
7170 7329 7.659186 ACAGCCTTATACTTTTACTATCTCCG 58.341 38.462 0.00 0.00 0.00 4.63
7246 7405 5.125417 AGCAGTGTTGAACTACATTGTTTGT 59.875 36.000 11.50 0.00 42.62 2.83
7289 7450 6.619329 AGAAAATTTTAAAGGGGCAGCATA 57.381 33.333 2.75 0.00 0.00 3.14
7325 7486 6.436218 TGTTGTCAGGCTAATCTGAGTAGTAA 59.564 38.462 13.03 0.00 43.54 2.24
7349 7510 5.624344 ATGCAAGAAACTGAGATGTCTTG 57.376 39.130 15.24 15.24 46.33 3.02
7391 7552 2.839228 AGAGGTAGATGAAAGGGCTGT 58.161 47.619 0.00 0.00 0.00 4.40
7402 7563 6.380274 TGTTCGTATCCAGAAAAGAGGTAGAT 59.620 38.462 0.00 0.00 0.00 1.98
7422 7583 7.461546 CGTCTGTTTAGTAGAATGACATGTTCG 60.462 40.741 0.00 0.00 0.00 3.95
7493 7654 4.719040 ACGAATAAAGACAAACGATTGCC 58.281 39.130 5.20 0.00 40.34 4.52
7806 7972 1.676615 GCATTCCCACCAGGCAAAATG 60.677 52.381 0.00 0.00 33.99 2.32
7849 8015 2.498167 GAATGCTAGGATGACCGCAAT 58.502 47.619 0.00 0.00 41.83 3.56
7857 8023 1.901591 AATGCCGGAATGCTAGGATG 58.098 50.000 5.05 0.00 0.00 3.51
7997 8163 4.149747 CACGATTTTAATTTGCACACCCAC 59.850 41.667 0.00 0.00 0.00 4.61
8028 8194 6.872020 GGTTAGTTCTGCAGACAGTTACAATA 59.128 38.462 18.03 0.12 44.77 1.90
8033 8199 4.587262 TCTGGTTAGTTCTGCAGACAGTTA 59.413 41.667 18.03 0.00 44.77 2.24
8088 8254 5.524284 CACACGTTTGATAACATTTTCCCA 58.476 37.500 0.00 0.00 33.75 4.37
8092 8258 5.587289 ACTGCACACGTTTGATAACATTTT 58.413 33.333 5.75 0.00 33.75 1.82
8246 8412 3.904136 ATGTTGCTCTAAACACTGCAC 57.096 42.857 0.00 0.00 42.56 4.57
8303 8469 5.568620 ACTCCAGTGGTAAGAAAGAACAT 57.431 39.130 9.54 0.00 0.00 2.71
8310 8476 5.820947 GTCAGAAAAACTCCAGTGGTAAGAA 59.179 40.000 9.54 0.00 0.00 2.52
8345 8511 6.882678 GCTGGTGACCTTTTAAGTCCTAAATA 59.117 38.462 2.11 0.00 33.09 1.40
8357 8523 6.493458 ACAAATAACATAGCTGGTGACCTTTT 59.507 34.615 2.11 0.00 0.00 2.27
8358 8524 6.010219 ACAAATAACATAGCTGGTGACCTTT 58.990 36.000 2.11 0.00 0.00 3.11
8367 8533 5.586243 AGCACCAGTACAAATAACATAGCTG 59.414 40.000 0.00 0.00 0.00 4.24
8479 8645 4.674101 CGCACATTTAACGGAATGATGGTT 60.674 41.667 13.17 0.00 38.93 3.67
8499 8665 2.357637 CCCAAAACAGACTTCTTTCGCA 59.642 45.455 0.00 0.00 0.00 5.10
8564 8730 7.944554 CCCATTAATGGTGAGGACAATATAGTT 59.055 37.037 28.62 0.00 46.65 2.24
8630 8879 4.932146 ACAAAAGTTTGGTGATACAGCAC 58.068 39.130 8.55 0.00 41.66 4.40
8801 9072 4.237724 GCAAGCTTGGTGAGGTATTTTTC 58.762 43.478 27.10 2.03 34.30 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.