Multiple sequence alignment - TraesCS4D01G246900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G246900 chr4D 100.000 6448 0 0 1 6448 415909874 415916321 0.000000e+00 11908.0
1 TraesCS4D01G246900 chr4D 77.778 639 105 16 5819 6434 79709157 79709781 6.150000e-95 359.0
2 TraesCS4D01G246900 chr4A 89.053 2567 185 50 3362 5873 48156432 48153907 0.000000e+00 3096.0
3 TraesCS4D01G246900 chr4A 88.083 1309 88 28 684 1936 48159274 48157978 0.000000e+00 1491.0
4 TraesCS4D01G246900 chr4A 91.317 668 47 10 2483 3147 48157081 48156422 0.000000e+00 902.0
5 TraesCS4D01G246900 chr4A 87.726 497 48 6 5958 6445 48153868 48153376 9.380000e-158 568.0
6 TraesCS4D01G246900 chr4A 90.045 442 30 11 2021 2452 48157822 48157385 1.570000e-155 560.0
7 TraesCS4D01G246900 chr4A 92.135 89 5 2 3252 3339 618462261 618462174 2.440000e-24 124.0
8 TraesCS4D01G246900 chr4A 88.172 93 8 3 3256 3346 590228010 590227919 2.460000e-19 108.0
9 TraesCS4D01G246900 chr4B 86.758 1465 133 32 3431 4870 512551730 512553158 0.000000e+00 1574.0
10 TraesCS4D01G246900 chr4B 85.793 1443 133 36 4910 6310 512553378 512554790 0.000000e+00 1463.0
11 TraesCS4D01G246900 chr4B 90.325 1106 63 14 810 1895 512548919 512550000 0.000000e+00 1410.0
12 TraesCS4D01G246900 chr4B 91.260 778 56 10 2483 3257 512550945 512551713 0.000000e+00 1050.0
13 TraesCS4D01G246900 chr4B 88.356 438 31 12 2027 2452 512550212 512550641 5.770000e-140 508.0
14 TraesCS4D01G246900 chr4B 100.000 43 0 0 4870 4912 512553197 512553239 5.360000e-11 80.5
15 TraesCS4D01G246900 chr7D 97.040 642 17 2 1 640 160017066 160016425 0.000000e+00 1079.0
16 TraesCS4D01G246900 chr7D 89.773 88 8 1 3256 3342 83656297 83656210 1.900000e-20 111.0
17 TraesCS4D01G246900 chr3D 96.579 643 20 2 1 641 578244339 578243697 0.000000e+00 1064.0
18 TraesCS4D01G246900 chr3D 96.069 636 24 1 1 635 355421070 355421705 0.000000e+00 1035.0
19 TraesCS4D01G246900 chr3D 90.000 70 7 0 5839 5908 123615598 123615667 2.480000e-14 91.6
20 TraesCS4D01G246900 chr2D 96.389 637 21 2 1 635 436017561 436016925 0.000000e+00 1048.0
21 TraesCS4D01G246900 chr2D 96.112 643 21 3 1 641 648276677 648276037 0.000000e+00 1046.0
22 TraesCS4D01G246900 chr2D 95.604 637 26 2 1 635 368789986 368789350 0.000000e+00 1020.0
23 TraesCS4D01G246900 chr2D 95.298 638 26 3 1 635 500686900 500687536 0.000000e+00 1009.0
24 TraesCS4D01G246900 chr2D 79.262 569 90 18 5892 6445 610013996 610013441 7.900000e-99 372.0
25 TraesCS4D01G246900 chr1D 95.194 645 24 4 1 638 22165347 22164703 0.000000e+00 1013.0
26 TraesCS4D01G246900 chr1D 80.655 336 63 2 6110 6445 362965260 362964927 6.410000e-65 259.0
27 TraesCS4D01G246900 chr1D 78.272 405 68 13 5957 6353 192629635 192629243 6.460000e-60 243.0
28 TraesCS4D01G246900 chr1D 88.776 98 9 2 3256 3351 403516130 403516033 1.140000e-22 119.0
29 TraesCS4D01G246900 chr6D 95.046 646 24 4 1 641 154401942 154402584 0.000000e+00 1009.0
30 TraesCS4D01G246900 chr5D 83.898 708 89 14 3431 4131 9919338 9918649 0.000000e+00 652.0
31 TraesCS4D01G246900 chr5D 81.269 331 42 13 2915 3245 9919684 9919374 3.860000e-62 250.0
32 TraesCS4D01G246900 chr7A 85.845 438 50 8 2809 3245 165003854 165003428 7.620000e-124 455.0
33 TraesCS4D01G246900 chr3B 79.206 630 105 13 5840 6445 130113971 130114598 1.290000e-111 414.0
34 TraesCS4D01G246900 chrUn 78.150 627 105 22 5844 6445 430915404 430916023 2.840000e-98 370.0
35 TraesCS4D01G246900 chr5B 78.150 627 105 22 5844 6445 266347739 266347120 2.840000e-98 370.0
36 TraesCS4D01G246900 chr5B 88.889 99 6 5 3242 3339 582158126 582158220 4.080000e-22 117.0
37 TraesCS4D01G246900 chr5A 77.723 606 110 13 5839 6433 679483325 679483916 1.330000e-91 348.0
38 TraesCS4D01G246900 chr5A 90.805 87 7 1 3254 3339 59700884 59700798 1.470000e-21 115.0
39 TraesCS4D01G246900 chr3A 86.087 230 25 5 4466 4689 64998818 64999046 2.320000e-59 241.0
40 TraesCS4D01G246900 chr2B 90.217 92 6 3 3256 3345 774876536 774876626 4.080000e-22 117.0
41 TraesCS4D01G246900 chr7B 90.698 86 7 1 3255 3339 428965844 428965929 5.280000e-21 113.0
42 TraesCS4D01G246900 chr7B 89.655 87 8 1 3254 3339 428965931 428965845 6.840000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G246900 chr4D 415909874 415916321 6447 False 11908.00 11908 100.000000 1 6448 1 chr4D.!!$F2 6447
1 TraesCS4D01G246900 chr4D 79709157 79709781 624 False 359.00 359 77.778000 5819 6434 1 chr4D.!!$F1 615
2 TraesCS4D01G246900 chr4A 48153376 48159274 5898 True 1323.40 3096 89.244800 684 6445 5 chr4A.!!$R3 5761
3 TraesCS4D01G246900 chr4B 512548919 512554790 5871 False 1014.25 1574 90.415333 810 6310 6 chr4B.!!$F1 5500
4 TraesCS4D01G246900 chr7D 160016425 160017066 641 True 1079.00 1079 97.040000 1 640 1 chr7D.!!$R2 639
5 TraesCS4D01G246900 chr3D 578243697 578244339 642 True 1064.00 1064 96.579000 1 641 1 chr3D.!!$R1 640
6 TraesCS4D01G246900 chr3D 355421070 355421705 635 False 1035.00 1035 96.069000 1 635 1 chr3D.!!$F2 634
7 TraesCS4D01G246900 chr2D 436016925 436017561 636 True 1048.00 1048 96.389000 1 635 1 chr2D.!!$R2 634
8 TraesCS4D01G246900 chr2D 648276037 648276677 640 True 1046.00 1046 96.112000 1 641 1 chr2D.!!$R4 640
9 TraesCS4D01G246900 chr2D 368789350 368789986 636 True 1020.00 1020 95.604000 1 635 1 chr2D.!!$R1 634
10 TraesCS4D01G246900 chr2D 500686900 500687536 636 False 1009.00 1009 95.298000 1 635 1 chr2D.!!$F1 634
11 TraesCS4D01G246900 chr2D 610013441 610013996 555 True 372.00 372 79.262000 5892 6445 1 chr2D.!!$R3 553
12 TraesCS4D01G246900 chr1D 22164703 22165347 644 True 1013.00 1013 95.194000 1 638 1 chr1D.!!$R1 637
13 TraesCS4D01G246900 chr6D 154401942 154402584 642 False 1009.00 1009 95.046000 1 641 1 chr6D.!!$F1 640
14 TraesCS4D01G246900 chr5D 9918649 9919684 1035 True 451.00 652 82.583500 2915 4131 2 chr5D.!!$R1 1216
15 TraesCS4D01G246900 chr3B 130113971 130114598 627 False 414.00 414 79.206000 5840 6445 1 chr3B.!!$F1 605
16 TraesCS4D01G246900 chrUn 430915404 430916023 619 False 370.00 370 78.150000 5844 6445 1 chrUn.!!$F1 601
17 TraesCS4D01G246900 chr5B 266347120 266347739 619 True 370.00 370 78.150000 5844 6445 1 chr5B.!!$R1 601
18 TraesCS4D01G246900 chr5A 679483325 679483916 591 False 348.00 348 77.723000 5839 6433 1 chr5A.!!$F1 594

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
653 663 0.107848 ACACAATGGTACCGGCTAGC 60.108 55.0 6.04 6.04 0.00 3.42 F
733 743 0.249398 ACACTGGGGCGTCTGATTAC 59.751 55.0 0.00 0.00 0.00 1.89 F
1853 1928 0.669318 TCAGGTAAAGTTGCTCCGCG 60.669 55.0 0.00 0.00 0.00 6.46 F
3107 3587 0.251386 TTGCCCTATTGTTCCCGCAA 60.251 50.0 0.00 0.00 34.08 4.85 F
3935 4433 0.389296 TCGTGCATCGTGGTTACTGG 60.389 55.0 8.22 0.00 40.80 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 1798 0.242555 CCGGCAAAACAATAAGGCGT 59.757 50.0 0.00 0.00 46.77 5.68 R
2357 2559 0.698238 CAAGGTTGGATCCCTGGTGA 59.302 55.0 9.90 0.00 30.99 4.02 R
3570 4053 0.634465 ACCAAAACCCAACAGGAGGT 59.366 50.0 0.00 0.00 39.89 3.85 R
3984 4483 0.180406 AGTAATGGCCCGCTAACCAG 59.820 55.0 0.00 0.00 39.88 4.00 R
5631 6332 0.036952 ACCGAACAGACTGCATGGAG 60.037 55.0 13.34 13.34 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
389 398 2.813474 CGAGACGCCGCCATGAAA 60.813 61.111 0.00 0.00 0.00 2.69
395 404 2.480555 GCCGCCATGAAAGACACG 59.519 61.111 0.00 0.00 0.00 4.49
437 446 1.760613 AGGCAGATTTATTCGTCCGGA 59.239 47.619 0.00 0.00 0.00 5.14
484 493 2.742053 CACCACGACCTACAAATCCAAG 59.258 50.000 0.00 0.00 0.00 3.61
501 510 2.753452 CCAAGACCTAACTACAGAGCGA 59.247 50.000 0.00 0.00 0.00 4.93
511 521 1.601419 TACAGAGCGAAGGAACGGGG 61.601 60.000 0.00 0.00 0.00 5.73
512 522 2.603776 AGAGCGAAGGAACGGGGT 60.604 61.111 0.00 0.00 0.00 4.95
579 589 2.372890 CCCTGGCTGGCTGAGATCA 61.373 63.158 9.67 0.00 0.00 2.92
641 651 2.421529 GGCTAGGGTAGGGAACACAATG 60.422 54.545 0.00 0.00 31.97 2.82
642 652 2.421529 GCTAGGGTAGGGAACACAATGG 60.422 54.545 0.00 0.00 31.97 3.16
643 653 1.755200 AGGGTAGGGAACACAATGGT 58.245 50.000 0.00 0.00 31.97 3.55
644 654 2.923908 AGGGTAGGGAACACAATGGTA 58.076 47.619 0.00 0.00 31.97 3.25
645 655 2.574824 AGGGTAGGGAACACAATGGTAC 59.425 50.000 0.00 0.00 31.97 3.34
646 656 2.356432 GGGTAGGGAACACAATGGTACC 60.356 54.545 4.43 4.43 0.00 3.34
647 657 2.624636 GTAGGGAACACAATGGTACCG 58.375 52.381 7.57 0.00 0.00 4.02
648 658 0.326927 AGGGAACACAATGGTACCGG 59.673 55.000 7.57 0.00 0.00 5.28
649 659 1.310216 GGGAACACAATGGTACCGGC 61.310 60.000 7.57 0.00 0.00 6.13
650 660 0.322187 GGAACACAATGGTACCGGCT 60.322 55.000 7.57 0.00 0.00 5.52
651 661 1.065998 GGAACACAATGGTACCGGCTA 60.066 52.381 7.57 0.00 0.00 3.93
652 662 2.277084 GAACACAATGGTACCGGCTAG 58.723 52.381 7.57 0.00 0.00 3.42
653 663 0.107848 ACACAATGGTACCGGCTAGC 60.108 55.000 6.04 6.04 0.00 3.42
654 664 1.143183 ACAATGGTACCGGCTAGCG 59.857 57.895 9.00 4.07 0.00 4.26
655 665 2.108362 AATGGTACCGGCTAGCGC 59.892 61.111 9.00 0.00 0.00 5.92
656 666 2.432300 AATGGTACCGGCTAGCGCT 61.432 57.895 17.26 17.26 36.09 5.92
657 667 2.644555 AATGGTACCGGCTAGCGCTG 62.645 60.000 22.90 11.45 42.32 5.18
658 668 3.834799 GGTACCGGCTAGCGCTGT 61.835 66.667 22.90 11.71 41.05 4.40
659 669 2.582498 GTACCGGCTAGCGCTGTG 60.582 66.667 22.90 14.12 41.05 3.66
660 670 4.508128 TACCGGCTAGCGCTGTGC 62.508 66.667 22.90 23.09 46.98 4.57
692 702 2.372264 TCGATGGGGAGTACAGTGTAC 58.628 52.381 23.31 23.31 0.00 2.90
696 706 1.621814 TGGGGAGTACAGTGTACTTGC 59.378 52.381 31.36 21.24 0.00 4.01
722 732 5.721747 GCAAATGCTTACCAACACTGGGG 62.722 52.174 0.00 0.00 41.87 4.96
728 738 2.669569 CCAACACTGGGGCGTCTG 60.670 66.667 0.00 0.00 39.30 3.51
730 740 1.003355 CAACACTGGGGCGTCTGAT 60.003 57.895 0.00 0.00 0.00 2.90
732 742 0.981183 AACACTGGGGCGTCTGATTA 59.019 50.000 0.00 0.00 0.00 1.75
733 743 0.249398 ACACTGGGGCGTCTGATTAC 59.751 55.000 0.00 0.00 0.00 1.89
734 744 0.806102 CACTGGGGCGTCTGATTACG 60.806 60.000 0.00 0.00 45.58 3.18
749 762 5.584251 TCTGATTACGCAATACATTTGCTGA 59.416 36.000 8.50 0.00 42.87 4.26
754 767 3.372206 ACGCAATACATTTGCTGAGACTC 59.628 43.478 8.50 0.00 42.87 3.36
755 768 3.371898 CGCAATACATTTGCTGAGACTCA 59.628 43.478 4.78 4.78 42.87 3.41
772 799 7.044181 TGAGACTCATCTAAAAATACCTGCAG 58.956 38.462 6.78 6.78 34.34 4.41
791 818 0.957888 GGAACCTGAACTGCCTGAGC 60.958 60.000 0.00 0.00 40.48 4.26
824 861 2.127232 GCGAGCCAACTCAAACGC 60.127 61.111 0.00 0.00 43.66 4.84
911 953 3.397613 GAATCCCCGCTCTGCTGCT 62.398 63.158 0.00 0.00 0.00 4.24
957 999 1.001503 CTCCTCCTCTCAGGGCACT 59.998 63.158 0.00 0.00 35.59 4.40
973 1015 4.705519 CTTGCCGCTTGGTTGCCG 62.706 66.667 0.00 0.00 34.16 5.69
1006 1049 2.443394 GCGAGGGGATCCATGGACA 61.443 63.158 18.99 0.00 34.83 4.02
1008 1051 1.644509 CGAGGGGATCCATGGACATA 58.355 55.000 18.99 0.00 34.83 2.29
1021 1064 1.343069 GGACATAGAATCCTCCCGCT 58.657 55.000 0.00 0.00 33.03 5.52
1374 1445 4.868171 TGACAACCGTTACAGCTATGAATC 59.132 41.667 0.00 0.00 0.00 2.52
1379 1450 5.858381 ACCGTTACAGCTATGAATCATGAT 58.142 37.500 5.91 1.18 0.00 2.45
1405 1476 3.012518 CTGGTGCCTCTGAATTTCGATT 58.987 45.455 0.00 0.00 0.00 3.34
1408 1479 3.691609 GGTGCCTCTGAATTTCGATTCTT 59.308 43.478 0.83 0.00 0.00 2.52
1578 1652 1.550072 ACTGTTTGCAAGCTTGTTGGT 59.450 42.857 26.55 14.04 0.00 3.67
1615 1690 6.186420 TGGCCTTCAGTTCTTATATATGCA 57.814 37.500 3.32 0.00 0.00 3.96
1723 1798 7.604164 TGGTTGTTCATCTTTGCTTTGTTTTTA 59.396 29.630 0.00 0.00 0.00 1.52
1726 1801 5.881637 TCATCTTTGCTTTGTTTTTACGC 57.118 34.783 0.00 0.00 0.00 4.42
1766 1841 4.395519 TGGAATGCCACCTGAACG 57.604 55.556 0.00 0.00 39.92 3.95
1813 1888 1.291132 GCGTAGGTGAGAAATCTGCC 58.709 55.000 0.00 0.00 0.00 4.85
1816 1891 2.271800 GTAGGTGAGAAATCTGCCACG 58.728 52.381 0.00 0.00 0.00 4.94
1819 1894 1.066430 GGTGAGAAATCTGCCACGGTA 60.066 52.381 0.00 0.00 0.00 4.02
1822 1897 3.689649 GTGAGAAATCTGCCACGGTAATT 59.310 43.478 0.00 0.00 0.00 1.40
1843 1918 2.955660 TGGTGCCACTTTTCAGGTAAAG 59.044 45.455 0.00 0.00 40.23 1.85
1846 1921 4.359706 GTGCCACTTTTCAGGTAAAGTTG 58.640 43.478 1.87 1.01 43.85 3.16
1851 1926 3.564225 ACTTTTCAGGTAAAGTTGCTCCG 59.436 43.478 0.00 0.00 43.85 4.63
1853 1928 0.669318 TCAGGTAAAGTTGCTCCGCG 60.669 55.000 0.00 0.00 0.00 6.46
1861 1936 2.202743 TTGCTCCGCGAATCTCCG 60.203 61.111 8.23 0.00 0.00 4.63
1865 1940 1.004277 GCTCCGCGAATCTCCGTATG 61.004 60.000 8.23 0.00 0.00 2.39
1900 1975 1.004044 AGTATGCCTGAGCTTGCACTT 59.996 47.619 8.44 0.00 40.88 3.16
1910 1985 3.181445 TGAGCTTGCACTTTTTCCTAGGA 60.181 43.478 7.62 7.62 0.00 2.94
1913 1993 3.507622 GCTTGCACTTTTTCCTAGGACAT 59.492 43.478 12.22 0.00 0.00 3.06
1919 1999 7.398829 TGCACTTTTTCCTAGGACATATAACA 58.601 34.615 12.22 2.95 0.00 2.41
1921 2001 8.345565 GCACTTTTTCCTAGGACATATAACATG 58.654 37.037 12.22 2.84 0.00 3.21
1922 2002 9.396022 CACTTTTTCCTAGGACATATAACATGT 57.604 33.333 12.22 0.00 34.52 3.21
1985 2117 1.097547 CAATCGACATGCCCCTGGTC 61.098 60.000 0.00 0.00 0.00 4.02
2010 2142 3.827876 TGTTGCTGTGTGATCCATCATTT 59.172 39.130 0.00 0.00 39.30 2.32
2048 2241 3.367630 GCTGTTTTGATTGGCCATAAACG 59.632 43.478 6.09 11.87 32.77 3.60
2078 2272 2.289882 TGACCTGCACCTTTGATCTCAG 60.290 50.000 0.00 0.00 0.00 3.35
2093 2287 9.097257 CTTTGATCTCAGTTCTCTCCTTTTATC 57.903 37.037 0.00 0.00 0.00 1.75
2094 2288 7.724490 TGATCTCAGTTCTCTCCTTTTATCA 57.276 36.000 0.00 0.00 0.00 2.15
2099 2293 6.702329 TCAGTTCTCTCCTTTTATCAGGTTC 58.298 40.000 0.00 0.00 35.15 3.62
2117 2311 4.590222 AGGTTCATTGTTGCATTTTCTCCT 59.410 37.500 0.00 0.00 0.00 3.69
2120 2314 5.633830 TCATTGTTGCATTTTCTCCTCTC 57.366 39.130 0.00 0.00 0.00 3.20
2139 2333 9.097257 CTCCTCTCTTTTTCTGAATACATTCTC 57.903 37.037 3.76 0.00 37.67 2.87
2184 2378 1.068250 GACTGGTATGCTCGGAGGC 59.932 63.158 7.20 0.00 0.00 4.70
2220 2414 6.697641 TTCTATCAGGTACCCAGTTTTCTT 57.302 37.500 8.74 0.00 0.00 2.52
2229 2423 9.159364 CAGGTACCCAGTTTTCTTACTAATTAC 57.841 37.037 8.74 0.00 0.00 1.89
2261 2455 6.491714 ACACTATCATCTTACTGCTGGAAT 57.508 37.500 0.00 0.00 0.00 3.01
2262 2456 6.286758 ACACTATCATCTTACTGCTGGAATG 58.713 40.000 0.00 0.00 0.00 2.67
2264 2458 7.160049 CACTATCATCTTACTGCTGGAATGAT 58.840 38.462 8.99 8.99 0.00 2.45
2266 2460 8.216423 ACTATCATCTTACTGCTGGAATGATTT 58.784 33.333 9.22 0.00 0.00 2.17
2267 2461 9.716531 CTATCATCTTACTGCTGGAATGATTTA 57.283 33.333 9.22 0.00 0.00 1.40
2445 2647 6.374333 TGACCTTGGTAATGCTCAACTAAATC 59.626 38.462 0.00 0.00 0.00 2.17
2446 2648 6.245408 ACCTTGGTAATGCTCAACTAAATCA 58.755 36.000 0.00 0.00 0.00 2.57
2447 2649 6.151144 ACCTTGGTAATGCTCAACTAAATCAC 59.849 38.462 0.00 0.00 0.00 3.06
2448 2650 6.150976 CCTTGGTAATGCTCAACTAAATCACA 59.849 38.462 0.00 0.00 0.00 3.58
2449 2651 7.148018 CCTTGGTAATGCTCAACTAAATCACAT 60.148 37.037 0.00 0.00 0.00 3.21
2451 2653 8.800370 TGGTAATGCTCAACTAAATCACATTA 57.200 30.769 0.00 0.00 0.00 1.90
2452 2654 9.407380 TGGTAATGCTCAACTAAATCACATTAT 57.593 29.630 0.00 0.00 32.84 1.28
2453 2655 9.669353 GGTAATGCTCAACTAAATCACATTATG 57.331 33.333 0.00 0.00 32.84 1.90
2476 2678 7.815398 TGTGAAATGCTTAATATGCAAGTTG 57.185 32.000 4.94 0.00 44.01 3.16
2477 2679 7.600960 TGTGAAATGCTTAATATGCAAGTTGA 58.399 30.769 7.16 0.00 44.01 3.18
2478 2680 8.087136 TGTGAAATGCTTAATATGCAAGTTGAA 58.913 29.630 7.16 0.00 44.01 2.69
2479 2681 9.090692 GTGAAATGCTTAATATGCAAGTTGAAT 57.909 29.630 7.16 3.90 44.01 2.57
2480 2682 9.656040 TGAAATGCTTAATATGCAAGTTGAATT 57.344 25.926 7.16 5.52 44.01 2.17
2490 2966 6.751514 ATGCAAGTTGAATTATAACACCGA 57.248 33.333 7.16 0.00 0.00 4.69
2555 3031 7.579339 GCCCTTTGTTTCCTTCATCATTGATAA 60.579 37.037 0.00 0.00 0.00 1.75
2617 3093 9.950680 AGTAAGTCAGTTTACATGTTGAATTTG 57.049 29.630 14.10 8.58 36.27 2.32
2629 3105 7.592051 ACATGTTGAATTTGCACAAACTTTTT 58.408 26.923 0.00 0.00 32.51 1.94
2637 3113 8.962884 AATTTGCACAAACTTTTTAAGAGGAT 57.037 26.923 0.00 0.00 32.51 3.24
2798 3276 6.360681 CCTTTGAACGATCTCAACATTTTGTC 59.639 38.462 0.00 0.00 35.07 3.18
2799 3277 6.370433 TTGAACGATCTCAACATTTTGTCA 57.630 33.333 0.00 0.00 34.02 3.58
2800 3278 5.989249 TGAACGATCTCAACATTTTGTCAG 58.011 37.500 0.00 0.00 34.02 3.51
2804 3282 7.065216 ACGATCTCAACATTTTGTCAGTATG 57.935 36.000 0.00 0.00 34.02 2.39
2857 3335 5.254115 AGCTAAAGGAACATACCCAACTTC 58.746 41.667 0.00 0.00 0.00 3.01
2913 3391 1.285962 CAGGAATGGGACTGGGAATGT 59.714 52.381 0.00 0.00 0.00 2.71
2960 3438 5.568423 GCATGATTTGGTTGTATGGGTTTCA 60.568 40.000 0.00 0.00 0.00 2.69
2976 3454 4.827284 GGGTTTCATTCCTTTCTCTCACAA 59.173 41.667 0.00 0.00 0.00 3.33
3000 3480 3.793797 TCCATATGTACGGTGAGTGTG 57.206 47.619 1.24 0.00 0.00 3.82
3001 3481 3.093814 TCCATATGTACGGTGAGTGTGT 58.906 45.455 1.24 0.00 0.00 3.72
3002 3482 3.129813 TCCATATGTACGGTGAGTGTGTC 59.870 47.826 1.24 0.00 0.00 3.67
3032 3512 8.858003 ACTAGTTAGACATTGTCGATTACATG 57.142 34.615 11.01 0.00 38.10 3.21
3103 3583 1.182667 GTGGTTGCCCTATTGTTCCC 58.817 55.000 0.00 0.00 0.00 3.97
3105 3585 1.663379 GGTTGCCCTATTGTTCCCGC 61.663 60.000 0.00 0.00 0.00 6.13
3106 3586 0.963355 GTTGCCCTATTGTTCCCGCA 60.963 55.000 0.00 0.00 0.00 5.69
3107 3587 0.251386 TTGCCCTATTGTTCCCGCAA 60.251 50.000 0.00 0.00 34.08 4.85
3147 3627 2.039613 CAGGGTGAGAGGAAGAAAAGCT 59.960 50.000 0.00 0.00 0.00 3.74
3169 3649 0.539051 GCTTCTGCTTAGCCTCTCCA 59.461 55.000 0.29 0.00 36.03 3.86
3170 3650 1.140652 GCTTCTGCTTAGCCTCTCCAT 59.859 52.381 0.29 0.00 36.03 3.41
3245 3726 6.467723 AAACTCTGTTGAAGCTGTTATACG 57.532 37.500 0.00 0.00 0.00 3.06
3246 3727 3.927142 ACTCTGTTGAAGCTGTTATACGC 59.073 43.478 0.00 0.00 0.00 4.42
3249 3730 5.716094 TCTGTTGAAGCTGTTATACGCTAA 58.284 37.500 0.00 0.00 34.96 3.09
3252 3733 7.333423 TCTGTTGAAGCTGTTATACGCTAAAAT 59.667 33.333 0.00 0.00 34.96 1.82
3254 3735 7.748683 TGTTGAAGCTGTTATACGCTAAAATTG 59.251 33.333 0.00 0.00 34.96 2.32
3255 3736 7.372451 TGAAGCTGTTATACGCTAAAATTGT 57.628 32.000 0.00 0.00 34.96 2.71
3256 3737 8.481974 TGAAGCTGTTATACGCTAAAATTGTA 57.518 30.769 0.00 0.00 34.96 2.41
3257 3738 8.385111 TGAAGCTGTTATACGCTAAAATTGTAC 58.615 33.333 0.00 0.00 34.96 2.90
3259 3740 8.128016 AGCTGTTATACGCTAAAATTGTACTC 57.872 34.615 0.00 0.00 34.11 2.59
3260 3741 7.224167 AGCTGTTATACGCTAAAATTGTACTCC 59.776 37.037 0.00 0.00 34.11 3.85
3261 3742 7.224167 GCTGTTATACGCTAAAATTGTACTCCT 59.776 37.037 0.00 0.00 0.00 3.69
3263 3744 7.707893 TGTTATACGCTAAAATTGTACTCCTCC 59.292 37.037 0.00 0.00 0.00 4.30
3264 3745 4.546829 ACGCTAAAATTGTACTCCTCCA 57.453 40.909 0.00 0.00 0.00 3.86
3265 3746 5.099042 ACGCTAAAATTGTACTCCTCCAT 57.901 39.130 0.00 0.00 0.00 3.41
3266 3747 5.116882 ACGCTAAAATTGTACTCCTCCATC 58.883 41.667 0.00 0.00 0.00 3.51
3267 3748 4.511826 CGCTAAAATTGTACTCCTCCATCC 59.488 45.833 0.00 0.00 0.00 3.51
3268 3749 4.822350 GCTAAAATTGTACTCCTCCATCCC 59.178 45.833 0.00 0.00 0.00 3.85
3269 3750 4.946160 AAAATTGTACTCCTCCATCCCA 57.054 40.909 0.00 0.00 0.00 4.37
3270 3751 3.933861 AATTGTACTCCTCCATCCCAC 57.066 47.619 0.00 0.00 0.00 4.61
3271 3752 2.335681 TTGTACTCCTCCATCCCACA 57.664 50.000 0.00 0.00 0.00 4.17
3272 3753 2.335681 TGTACTCCTCCATCCCACAA 57.664 50.000 0.00 0.00 0.00 3.33
3273 3754 2.845659 TGTACTCCTCCATCCCACAAT 58.154 47.619 0.00 0.00 0.00 2.71
3274 3755 4.002256 TGTACTCCTCCATCCCACAATA 57.998 45.455 0.00 0.00 0.00 1.90
3275 3756 4.566837 TGTACTCCTCCATCCCACAATAT 58.433 43.478 0.00 0.00 0.00 1.28
3276 3757 5.722290 TGTACTCCTCCATCCCACAATATA 58.278 41.667 0.00 0.00 0.00 0.86
3277 3758 6.147473 TGTACTCCTCCATCCCACAATATAA 58.853 40.000 0.00 0.00 0.00 0.98
3278 3759 5.832539 ACTCCTCCATCCCACAATATAAG 57.167 43.478 0.00 0.00 0.00 1.73
3279 3760 5.476983 ACTCCTCCATCCCACAATATAAGA 58.523 41.667 0.00 0.00 0.00 2.10
3280 3761 6.094302 ACTCCTCCATCCCACAATATAAGAT 58.906 40.000 0.00 0.00 0.00 2.40
3281 3762 6.013032 ACTCCTCCATCCCACAATATAAGATG 60.013 42.308 0.00 0.00 35.24 2.90
3282 3763 5.851693 TCCTCCATCCCACAATATAAGATGT 59.148 40.000 0.00 0.00 33.95 3.06
3283 3764 6.332635 TCCTCCATCCCACAATATAAGATGTT 59.667 38.462 0.00 0.00 33.95 2.71
3284 3765 7.006509 CCTCCATCCCACAATATAAGATGTTT 58.993 38.462 0.00 0.00 33.95 2.83
3285 3766 7.506938 CCTCCATCCCACAATATAAGATGTTTT 59.493 37.037 0.00 0.00 33.95 2.43
3286 3767 8.837099 TCCATCCCACAATATAAGATGTTTTT 57.163 30.769 0.00 0.00 33.95 1.94
3287 3768 8.694540 TCCATCCCACAATATAAGATGTTTTTG 58.305 33.333 0.00 0.00 33.95 2.44
3288 3769 7.439056 CCATCCCACAATATAAGATGTTTTTGC 59.561 37.037 0.00 0.00 33.95 3.68
3289 3770 7.473735 TCCCACAATATAAGATGTTTTTGCA 57.526 32.000 0.00 0.00 0.00 4.08
3290 3771 7.319646 TCCCACAATATAAGATGTTTTTGCAC 58.680 34.615 0.00 0.00 0.00 4.57
3291 3772 6.253298 CCCACAATATAAGATGTTTTTGCACG 59.747 38.462 0.00 0.00 0.00 5.34
3292 3773 6.237542 CCACAATATAAGATGTTTTTGCACGC 60.238 38.462 0.00 0.00 0.00 5.34
3293 3774 6.527722 CACAATATAAGATGTTTTTGCACGCT 59.472 34.615 0.00 0.00 0.00 5.07
3294 3775 7.696035 CACAATATAAGATGTTTTTGCACGCTA 59.304 33.333 0.00 0.00 0.00 4.26
3295 3776 8.240682 ACAATATAAGATGTTTTTGCACGCTAA 58.759 29.630 0.00 0.00 0.00 3.09
3296 3777 9.071221 CAATATAAGATGTTTTTGCACGCTAAA 57.929 29.630 0.00 0.00 0.00 1.85
3297 3778 9.632807 AATATAAGATGTTTTTGCACGCTAAAA 57.367 25.926 7.19 7.19 0.00 1.52
3298 3779 5.635549 AAGATGTTTTTGCACGCTAAAAC 57.364 34.783 24.99 24.99 45.09 2.43
3301 3782 3.218935 GTTTTTGCACGCTAAAACAGC 57.781 42.857 26.05 8.65 44.64 4.40
3314 3795 3.989705 AAAACAGCTTGCAAAAACGTC 57.010 38.095 0.00 0.00 0.00 4.34
3315 3796 2.939460 AACAGCTTGCAAAAACGTCT 57.061 40.000 0.00 0.00 0.00 4.18
3316 3797 2.939460 ACAGCTTGCAAAAACGTCTT 57.061 40.000 0.00 0.00 0.00 3.01
3317 3798 4.364415 AACAGCTTGCAAAAACGTCTTA 57.636 36.364 0.00 0.00 0.00 2.10
3318 3799 4.568152 ACAGCTTGCAAAAACGTCTTAT 57.432 36.364 0.00 0.00 0.00 1.73
3319 3800 5.682943 ACAGCTTGCAAAAACGTCTTATA 57.317 34.783 0.00 0.00 0.00 0.98
3320 3801 6.254281 ACAGCTTGCAAAAACGTCTTATAT 57.746 33.333 0.00 0.00 0.00 0.86
3321 3802 6.677913 ACAGCTTGCAAAAACGTCTTATATT 58.322 32.000 0.00 0.00 0.00 1.28
3322 3803 6.582295 ACAGCTTGCAAAAACGTCTTATATTG 59.418 34.615 0.00 0.00 0.00 1.90
3323 3804 6.582295 CAGCTTGCAAAAACGTCTTATATTGT 59.418 34.615 0.00 0.00 0.00 2.71
3324 3805 6.582295 AGCTTGCAAAAACGTCTTATATTGTG 59.418 34.615 0.00 0.00 0.00 3.33
3325 3806 6.183359 GCTTGCAAAAACGTCTTATATTGTGG 60.183 38.462 0.00 0.00 0.00 4.17
3326 3807 5.704888 TGCAAAAACGTCTTATATTGTGGG 58.295 37.500 0.00 0.00 0.00 4.61
3327 3808 5.473846 TGCAAAAACGTCTTATATTGTGGGA 59.526 36.000 0.00 0.00 0.00 4.37
3328 3809 6.016192 TGCAAAAACGTCTTATATTGTGGGAA 60.016 34.615 0.00 0.00 0.00 3.97
3329 3810 6.526674 GCAAAAACGTCTTATATTGTGGGAAG 59.473 38.462 0.00 0.00 0.00 3.46
3330 3811 6.753107 AAAACGTCTTATATTGTGGGAAGG 57.247 37.500 0.00 0.00 0.00 3.46
3331 3812 5.687166 AACGTCTTATATTGTGGGAAGGA 57.313 39.130 0.00 0.00 0.00 3.36
3332 3813 5.277857 ACGTCTTATATTGTGGGAAGGAG 57.722 43.478 0.00 0.00 0.00 3.69
3333 3814 4.101119 ACGTCTTATATTGTGGGAAGGAGG 59.899 45.833 0.00 0.00 0.00 4.30
3334 3815 4.503296 CGTCTTATATTGTGGGAAGGAGGG 60.503 50.000 0.00 0.00 0.00 4.30
3335 3816 4.658901 GTCTTATATTGTGGGAAGGAGGGA 59.341 45.833 0.00 0.00 0.00 4.20
3336 3817 4.907875 TCTTATATTGTGGGAAGGAGGGAG 59.092 45.833 0.00 0.00 0.00 4.30
3337 3818 2.661176 TATTGTGGGAAGGAGGGAGT 57.339 50.000 0.00 0.00 0.00 3.85
3341 3822 2.478292 TGTGGGAAGGAGGGAGTATTC 58.522 52.381 0.00 0.00 0.00 1.75
3351 3832 5.810095 AGGAGGGAGTATTCTTTTCTGTTG 58.190 41.667 0.00 0.00 0.00 3.33
3352 3833 4.396478 GGAGGGAGTATTCTTTTCTGTTGC 59.604 45.833 0.00 0.00 0.00 4.17
3353 3834 5.248380 AGGGAGTATTCTTTTCTGTTGCT 57.752 39.130 0.00 0.00 0.00 3.91
3354 3835 5.635120 AGGGAGTATTCTTTTCTGTTGCTT 58.365 37.500 0.00 0.00 0.00 3.91
3355 3836 5.707764 AGGGAGTATTCTTTTCTGTTGCTTC 59.292 40.000 0.00 0.00 0.00 3.86
3356 3837 5.473504 GGGAGTATTCTTTTCTGTTGCTTCA 59.526 40.000 0.00 0.00 0.00 3.02
3357 3838 6.151817 GGGAGTATTCTTTTCTGTTGCTTCAT 59.848 38.462 0.00 0.00 0.00 2.57
3358 3839 7.247019 GGAGTATTCTTTTCTGTTGCTTCATC 58.753 38.462 0.00 0.00 0.00 2.92
3359 3840 7.094634 GGAGTATTCTTTTCTGTTGCTTCATCA 60.095 37.037 0.00 0.00 0.00 3.07
3360 3841 8.345724 AGTATTCTTTTCTGTTGCTTCATCAT 57.654 30.769 0.00 0.00 0.00 2.45
3361 3842 8.242053 AGTATTCTTTTCTGTTGCTTCATCATG 58.758 33.333 0.00 0.00 0.00 3.07
3362 3843 5.381174 TCTTTTCTGTTGCTTCATCATGG 57.619 39.130 0.00 0.00 0.00 3.66
3363 3844 5.072055 TCTTTTCTGTTGCTTCATCATGGA 58.928 37.500 0.00 0.00 0.00 3.41
3364 3845 5.535783 TCTTTTCTGTTGCTTCATCATGGAA 59.464 36.000 0.00 0.00 0.00 3.53
3365 3846 5.381174 TTTCTGTTGCTTCATCATGGAAG 57.619 39.130 7.21 7.21 45.58 3.46
3366 3847 4.290711 TCTGTTGCTTCATCATGGAAGA 57.709 40.909 13.91 0.00 45.66 2.87
3367 3848 4.654915 TCTGTTGCTTCATCATGGAAGAA 58.345 39.130 13.91 2.66 45.66 2.52
3368 3849 5.258841 TCTGTTGCTTCATCATGGAAGAAT 58.741 37.500 13.91 0.00 45.66 2.40
3369 3850 5.124936 TCTGTTGCTTCATCATGGAAGAATG 59.875 40.000 13.91 1.11 45.66 2.67
3370 3851 4.110482 GTTGCTTCATCATGGAAGAATGC 58.890 43.478 13.91 10.77 45.66 3.56
3371 3852 3.358118 TGCTTCATCATGGAAGAATGCA 58.642 40.909 13.91 12.52 45.66 3.96
3382 3863 3.708631 TGGAAGAATGCACCCAAAAGAAA 59.291 39.130 0.00 0.00 0.00 2.52
3383 3864 4.347583 TGGAAGAATGCACCCAAAAGAAAT 59.652 37.500 0.00 0.00 0.00 2.17
3385 3866 5.511202 GGAAGAATGCACCCAAAAGAAATGA 60.511 40.000 0.00 0.00 0.00 2.57
3386 3867 5.143376 AGAATGCACCCAAAAGAAATGAG 57.857 39.130 0.00 0.00 0.00 2.90
3388 3869 5.305128 AGAATGCACCCAAAAGAAATGAGAA 59.695 36.000 0.00 0.00 0.00 2.87
3389 3870 4.589216 TGCACCCAAAAGAAATGAGAAG 57.411 40.909 0.00 0.00 0.00 2.85
3390 3871 3.243839 TGCACCCAAAAGAAATGAGAAGC 60.244 43.478 0.00 0.00 0.00 3.86
3393 3875 3.966665 ACCCAAAAGAAATGAGAAGCCAA 59.033 39.130 0.00 0.00 0.00 4.52
3397 3879 6.225318 CCAAAAGAAATGAGAAGCCAAATGA 58.775 36.000 0.00 0.00 0.00 2.57
3406 3888 9.612066 AAATGAGAAGCCAAATGAAAACTAAAA 57.388 25.926 0.00 0.00 0.00 1.52
3460 3942 2.367894 TGGTTTGCTGCATGAATTCCAA 59.632 40.909 1.84 0.00 0.00 3.53
3463 3945 4.142773 GGTTTGCTGCATGAATTCCAAATG 60.143 41.667 1.84 1.48 0.00 2.32
3464 3946 3.254470 TGCTGCATGAATTCCAAATGG 57.746 42.857 0.00 0.00 0.00 3.16
3465 3947 2.832733 TGCTGCATGAATTCCAAATGGA 59.167 40.909 0.00 0.00 43.73 3.41
3466 3948 3.452990 TGCTGCATGAATTCCAAATGGAT 59.547 39.130 2.38 0.00 44.98 3.41
3467 3949 4.080807 TGCTGCATGAATTCCAAATGGATT 60.081 37.500 2.38 0.00 44.98 3.01
3531 4013 7.582667 AACAAGGCAGTAACTTGAATTTAGT 57.417 32.000 11.65 0.00 46.27 2.24
3533 4015 7.425606 ACAAGGCAGTAACTTGAATTTAGTTG 58.574 34.615 11.65 3.57 46.27 3.16
3537 4019 7.173390 AGGCAGTAACTTGAATTTAGTTGACTC 59.827 37.037 13.97 8.94 36.56 3.36
3568 4051 8.628368 AAATTGAAATTAAGATCCCCAATCCT 57.372 30.769 0.00 0.00 34.67 3.24
3570 4053 9.728100 AATTGAAATTAAGATCCCCAATCCTAA 57.272 29.630 0.00 0.00 34.67 2.69
3571 4054 8.533569 TTGAAATTAAGATCCCCAATCCTAAC 57.466 34.615 0.00 0.00 34.67 2.34
3592 4075 0.930726 TCCTGTTGGGTTTTGGTCCT 59.069 50.000 0.00 0.00 36.25 3.85
3596 4079 1.854280 TGTTGGGTTTTGGTCCTACCT 59.146 47.619 7.89 0.00 39.58 3.08
3603 4086 4.591498 GGGTTTTGGTCCTACCTGAATTTT 59.409 41.667 7.89 0.00 39.58 1.82
3628 4111 7.765695 TTTCTTTGCTGAGAAATATCCAGTT 57.234 32.000 9.92 0.00 39.90 3.16
3644 4127 9.859427 AATATCCAGTTACAAAATGTTGATGTG 57.141 29.630 1.62 0.00 38.20 3.21
3647 4130 7.369607 TCCAGTTACAAAATGTTGATGTGATG 58.630 34.615 1.62 0.00 38.20 3.07
3649 4132 6.089820 CAGTTACAAAATGTTGATGTGATGGC 59.910 38.462 1.62 0.00 38.20 4.40
3652 4138 5.172934 ACAAAATGTTGATGTGATGGCATC 58.827 37.500 20.52 20.52 43.97 3.91
3662 4148 4.400529 TGTGATGGCATCATACGTTACT 57.599 40.909 30.94 0.00 42.04 2.24
3675 4161 9.355215 CATCATACGTTACTCACTTTCTAGTTT 57.645 33.333 0.00 0.00 30.26 2.66
3676 4162 8.961294 TCATACGTTACTCACTTTCTAGTTTC 57.039 34.615 0.00 0.00 30.26 2.78
3677 4163 8.790718 TCATACGTTACTCACTTTCTAGTTTCT 58.209 33.333 0.00 0.00 30.26 2.52
3685 4171 8.240267 ACTCACTTTCTAGTTTCTACAGACTT 57.760 34.615 0.00 0.00 30.26 3.01
3694 4180 6.679327 AGTTTCTACAGACTTGTTTGAACC 57.321 37.500 0.00 0.00 38.76 3.62
3734 4223 7.807977 AGTAGCAGAACTGAGATTTGAAAAA 57.192 32.000 5.97 0.00 0.00 1.94
3735 4224 7.643579 AGTAGCAGAACTGAGATTTGAAAAAC 58.356 34.615 5.97 0.00 0.00 2.43
3763 4258 9.285770 CTTGTTTACAAACTTTAACTTGTCCTC 57.714 33.333 6.41 0.00 39.59 3.71
3817 4312 4.202253 TGCAGTCACTTTCACTCAGTACAT 60.202 41.667 0.00 0.00 0.00 2.29
3879 4374 1.795170 AACATGGTGAAGGTGCGTGC 61.795 55.000 0.00 0.00 0.00 5.34
3882 4377 1.308069 ATGGTGAAGGTGCGTGCATC 61.308 55.000 0.00 0.00 0.00 3.91
3893 4391 2.903172 CGTGCATCGCTTTTCTTCG 58.097 52.632 0.00 0.00 0.00 3.79
3915 4413 5.123820 TCGTGGTTTCATGAAATCCATTCTC 59.876 40.000 29.07 20.66 38.92 2.87
3917 4415 6.558909 GTGGTTTCATGAAATCCATTCTCTC 58.441 40.000 29.07 18.76 38.92 3.20
3921 4419 3.873361 TCATGAAATCCATTCTCTCGTGC 59.127 43.478 0.00 0.00 38.92 5.34
3924 4422 3.873361 TGAAATCCATTCTCTCGTGCATC 59.127 43.478 0.00 0.00 38.92 3.91
3935 4433 0.389296 TCGTGCATCGTGGTTACTGG 60.389 55.000 8.22 0.00 40.80 4.00
3947 4445 2.636768 GTTACTGGAACCATGCAAGC 57.363 50.000 0.00 0.00 31.20 4.01
3950 4449 0.469705 ACTGGAACCATGCAAGCCAA 60.470 50.000 0.00 0.00 0.00 4.52
3964 4463 4.336433 TGCAAGCCAATTAGCATCTAAGAC 59.664 41.667 0.00 0.00 34.23 3.01
3972 4471 6.989169 CCAATTAGCATCTAAGACACTTAGCT 59.011 38.462 12.06 9.95 35.06 3.32
3980 4479 6.675413 TCTAAGACACTTAGCTGGGTTAAA 57.325 37.500 12.06 0.00 0.00 1.52
3984 4483 6.819397 AGACACTTAGCTGGGTTAAATTTC 57.181 37.500 0.00 0.00 0.00 2.17
4133 4634 8.090214 AGGGACATTTCTTTATTTTGTCACATG 58.910 33.333 6.41 0.00 41.96 3.21
4134 4635 7.148590 GGGACATTTCTTTATTTTGTCACATGC 60.149 37.037 0.00 0.00 39.84 4.06
4135 4636 7.384660 GGACATTTCTTTATTTTGTCACATGCA 59.615 33.333 0.00 0.00 38.71 3.96
4136 4637 8.075593 ACATTTCTTTATTTTGTCACATGCAC 57.924 30.769 0.00 0.00 0.00 4.57
4138 4639 7.697352 TTTCTTTATTTTGTCACATGCACAG 57.303 32.000 0.00 0.00 0.00 3.66
4143 4652 5.772825 ATTTTGTCACATGCACAGTTAGT 57.227 34.783 0.00 0.00 0.00 2.24
4174 4683 5.752472 TGTCCATGGCATTTTAATTATTGCG 59.248 36.000 6.96 0.00 35.95 4.85
4194 4703 7.485418 TTGCGTCAAGAATAAGTTTAACTGA 57.515 32.000 0.00 0.00 0.00 3.41
4196 4705 7.739295 TGCGTCAAGAATAAGTTTAACTGATC 58.261 34.615 0.00 0.00 0.00 2.92
4199 4708 7.063074 CGTCAAGAATAAGTTTAACTGATCCGT 59.937 37.037 0.00 0.00 0.00 4.69
4221 4731 7.487829 TCCGTTTATATGAAGCTGCAAAAATTC 59.512 33.333 0.00 0.00 0.00 2.17
4223 4733 7.513505 CGTTTATATGAAGCTGCAAAAATTCGG 60.514 37.037 0.00 0.00 0.00 4.30
4224 4734 1.782044 TGAAGCTGCAAAAATTCGGC 58.218 45.000 1.02 0.00 34.91 5.54
4225 4735 1.068281 TGAAGCTGCAAAAATTCGGCA 59.932 42.857 1.02 0.00 37.06 5.69
4228 4738 0.508213 GCTGCAAAAATTCGGCACAC 59.492 50.000 0.00 0.00 34.83 3.82
4288 4799 7.379098 GGAATTTTCCTAGTTCTTACACCAG 57.621 40.000 1.97 0.00 44.11 4.00
4603 5117 3.558109 GCTGCTGACTTTCTTTACCTCCT 60.558 47.826 0.00 0.00 0.00 3.69
4702 5216 3.919216 ACTGATGTCTTGAAGTCCTTCG 58.081 45.455 2.82 0.00 42.28 3.79
4728 5242 2.223876 TGGACTCGTCTTAGCACGTTTT 60.224 45.455 0.00 0.00 40.79 2.43
5058 5752 5.107143 CCAAATGGCGTTTGTCCTTTTTATG 60.107 40.000 25.81 7.24 44.58 1.90
5059 5753 4.864704 ATGGCGTTTGTCCTTTTTATGT 57.135 36.364 0.00 0.00 0.00 2.29
5061 5755 3.381908 TGGCGTTTGTCCTTTTTATGTGT 59.618 39.130 0.00 0.00 0.00 3.72
5072 5766 7.708752 TGTCCTTTTTATGTGTGGAAACAAATC 59.291 33.333 0.00 0.00 46.06 2.17
5120 5814 3.181447 GGATCTGAGAATTGCCCTGATGA 60.181 47.826 0.00 0.00 0.00 2.92
5167 5863 8.833493 ACCATAACGTACTAAAATTTGGCTATC 58.167 33.333 0.00 0.00 0.00 2.08
5180 5876 1.145945 TGGCTATCCAAACACCCACAA 59.854 47.619 0.00 0.00 39.99 3.33
5200 5896 2.568090 CGGCCATGTGCAGGTTTC 59.432 61.111 2.24 0.00 43.89 2.78
5206 5902 2.359900 CCATGTGCAGGTTTCTAGGAC 58.640 52.381 0.00 0.00 0.00 3.85
5209 5905 0.606604 GTGCAGGTTTCTAGGACGGA 59.393 55.000 0.00 0.00 0.00 4.69
5217 5913 2.619646 GTTTCTAGGACGGAGGCTCTAG 59.380 54.545 15.23 11.39 0.00 2.43
5245 5943 6.220201 GCAAAATTTAGTGCCCTGAAAGTTA 58.780 36.000 3.85 0.00 34.58 2.24
5246 5944 6.873605 GCAAAATTTAGTGCCCTGAAAGTTAT 59.126 34.615 3.85 0.00 34.58 1.89
5278 5976 6.917217 AGTCTAGTGAATATTCTTTGCAGC 57.083 37.500 16.24 2.54 0.00 5.25
5317 6015 7.387673 TCTGTTTTATTCTACTGTGATGTGTGG 59.612 37.037 0.00 0.00 0.00 4.17
5331 6029 4.022155 TGATGTGTGGTGATGGTTCATTTG 60.022 41.667 0.00 0.00 33.56 2.32
5376 6074 1.695242 TGGAAGGCTACTCAACGGAAA 59.305 47.619 0.00 0.00 0.00 3.13
5474 6172 1.629353 AGAGCTGGAGATGGCCATATG 59.371 52.381 19.70 4.54 37.30 1.78
5490 6188 4.812096 GCCATATGCCCATATCCTTGACTT 60.812 45.833 0.00 0.00 31.98 3.01
5492 6190 6.484288 CCATATGCCCATATCCTTGACTTAA 58.516 40.000 0.00 0.00 31.98 1.85
5537 6238 0.392461 TAAGAGGGTGCATGCGAACC 60.392 55.000 16.94 16.94 35.59 3.62
5570 6271 6.119240 ACGGAGATCACCAAATCATATCAT 57.881 37.500 9.99 0.00 0.00 2.45
5572 6273 7.855375 ACGGAGATCACCAAATCATATCATAT 58.145 34.615 9.99 0.00 0.00 1.78
5631 6332 4.504858 CATCTACATATCCGCCCTAAACC 58.495 47.826 0.00 0.00 0.00 3.27
5639 6340 1.077787 CGCCCTAAACCTCCATGCA 60.078 57.895 0.00 0.00 0.00 3.96
5675 6377 1.228154 AACCGGACCTGGCAAACTC 60.228 57.895 9.46 0.00 0.00 3.01
5679 6381 2.032681 GACCTGGCAAACTCGGCT 59.967 61.111 0.00 0.00 0.00 5.52
5687 6389 0.028902 GCAAACTCGGCTCAAACGTT 59.971 50.000 0.00 0.00 0.00 3.99
5693 6418 2.325082 CGGCTCAAACGTTCCCAGG 61.325 63.158 0.00 0.00 0.00 4.45
5705 6430 2.565841 GTTCCCAGGACATATGTGAGC 58.434 52.381 14.43 2.16 0.00 4.26
5777 6502 3.015327 CCTGAGCCAAATCTCTTGAAGG 58.985 50.000 0.00 0.00 34.29 3.46
5783 6508 2.616510 CCAAATCTCTTGAAGGCGTCCT 60.617 50.000 0.00 0.00 33.87 3.85
5790 6515 0.472471 TTGAAGGCGTCCTTGTCCTT 59.528 50.000 14.63 2.05 44.82 3.36
5791 6516 0.472471 TGAAGGCGTCCTTGTCCTTT 59.528 50.000 14.63 0.00 44.82 3.11
5813 6538 1.361993 CGATCTGCCCTCTTCCTCG 59.638 63.158 0.00 0.00 0.00 4.63
5814 6539 1.103987 CGATCTGCCCTCTTCCTCGA 61.104 60.000 0.00 0.00 0.00 4.04
5836 6561 1.002430 TCTTTTCTGCCTCGTCTGCAT 59.998 47.619 0.00 0.00 38.22 3.96
5860 6588 3.118454 CATCGTTGCTCCGCCGTT 61.118 61.111 0.00 0.00 0.00 4.44
5885 6613 1.752694 AAACCATAGCGCCGCCATT 60.753 52.632 4.98 0.00 0.00 3.16
5967 6733 4.804139 GTGTACATGTAACTCCTTCGGATG 59.196 45.833 7.25 0.00 0.00 3.51
5991 6759 2.668457 CACCTCGTGCTCTGTATTTGAC 59.332 50.000 0.00 0.00 0.00 3.18
6164 6946 4.082665 TGATGAGCATCCAGGAAGAATC 57.917 45.455 7.92 0.00 37.02 2.52
6177 6959 3.454082 AGGAAGAATCGGAGAAGCAAGAT 59.546 43.478 0.00 0.00 43.58 2.40
6214 6996 1.014352 CAAGGGTTCGATAAAGGGCG 58.986 55.000 0.00 0.00 0.00 6.13
6247 7029 1.625315 CTTGGGATAGGATCGATGGCA 59.375 52.381 0.54 0.00 0.00 4.92
6395 7179 3.879892 ACAACTTCAAGCTGAGGAAGAAC 59.120 43.478 22.59 0.00 42.39 3.01
6411 7195 1.947456 AGAACTGTTGCGGGAAACTTC 59.053 47.619 0.00 0.00 0.00 3.01
6434 7218 6.019748 TCCTTTCTCTCCTCTACAGAAATGT 58.980 40.000 0.00 0.00 31.98 2.71
6445 7229 2.648059 ACAGAAATGTATGGCTGCTCC 58.352 47.619 0.00 0.00 31.74 4.70
6446 7230 1.600957 CAGAAATGTATGGCTGCTCCG 59.399 52.381 0.00 0.00 37.80 4.63
6447 7231 1.486310 AGAAATGTATGGCTGCTCCGA 59.514 47.619 0.00 0.00 37.80 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
395 404 3.901797 CTTCACTCCCACACCGGCC 62.902 68.421 0.00 0.00 0.00 6.13
484 493 3.015327 TCCTTCGCTCTGTAGTTAGGTC 58.985 50.000 0.00 0.00 0.00 3.85
511 521 3.412408 GGCAAGAGGGAGGGGGAC 61.412 72.222 0.00 0.00 0.00 4.46
568 578 2.539432 TCTTCCTCTGATCTCAGCCA 57.461 50.000 2.21 0.00 43.46 4.75
579 589 1.210722 GGGAGGCGATTTTCTTCCTCT 59.789 52.381 7.03 0.00 43.46 3.69
670 680 1.757118 ACACTGTACTCCCCATCGATG 59.243 52.381 18.76 18.76 0.00 3.84
671 681 2.160721 ACACTGTACTCCCCATCGAT 57.839 50.000 0.00 0.00 0.00 3.59
672 682 2.025605 AGTACACTGTACTCCCCATCGA 60.026 50.000 15.04 0.00 0.00 3.59
673 683 2.376109 AGTACACTGTACTCCCCATCG 58.624 52.381 15.04 0.00 0.00 3.84
674 684 3.679083 GCAAGTACACTGTACTCCCCATC 60.679 52.174 19.96 5.05 0.00 3.51
675 685 2.236395 GCAAGTACACTGTACTCCCCAT 59.764 50.000 19.96 3.86 0.00 4.00
676 686 1.621814 GCAAGTACACTGTACTCCCCA 59.378 52.381 19.96 0.00 0.00 4.96
677 687 1.900486 AGCAAGTACACTGTACTCCCC 59.100 52.381 19.96 12.08 0.00 4.81
678 688 2.826725 AGAGCAAGTACACTGTACTCCC 59.173 50.000 19.96 14.11 0.00 4.30
679 689 3.839293 CAGAGCAAGTACACTGTACTCC 58.161 50.000 19.96 14.40 0.00 3.85
680 690 3.246619 GCAGAGCAAGTACACTGTACTC 58.753 50.000 19.96 10.27 31.69 2.59
681 691 2.628178 TGCAGAGCAAGTACACTGTACT 59.372 45.455 15.04 15.04 34.76 2.73
682 692 3.026630 TGCAGAGCAAGTACACTGTAC 57.973 47.619 10.90 10.90 34.76 2.90
696 706 3.254166 AGTGTTGGTAAGCATTTGCAGAG 59.746 43.478 5.20 0.00 45.16 3.35
712 722 0.606401 AATCAGACGCCCCAGTGTTG 60.606 55.000 0.00 0.00 36.67 3.33
723 733 4.666176 GCAAATGTATTGCGTAATCAGACG 59.334 41.667 0.69 0.00 45.70 4.18
733 743 8.630869 TAGATGAGTCTCAGCAAATGTATTGCG 61.631 40.741 19.76 3.74 41.65 4.85
734 744 4.952262 TGAGTCTCAGCAAATGTATTGC 57.048 40.909 0.00 5.06 45.22 3.56
735 745 6.922247 AGATGAGTCTCAGCAAATGTATTG 57.078 37.500 19.76 0.00 34.77 1.90
737 747 9.453572 TTTTTAGATGAGTCTCAGCAAATGTAT 57.546 29.630 19.76 0.27 34.77 2.29
738 748 8.846943 TTTTTAGATGAGTCTCAGCAAATGTA 57.153 30.769 19.76 0.72 34.77 2.29
749 762 6.156949 TCCTGCAGGTATTTTTAGATGAGTCT 59.843 38.462 31.58 0.00 36.09 3.24
754 767 5.888161 AGGTTCCTGCAGGTATTTTTAGATG 59.112 40.000 31.58 1.87 36.34 2.90
755 768 5.888161 CAGGTTCCTGCAGGTATTTTTAGAT 59.112 40.000 31.58 5.96 36.34 1.98
772 799 0.957888 GCTCAGGCAGTTCAGGTTCC 60.958 60.000 0.00 0.00 38.54 3.62
791 818 2.046507 GCTCCACTGCTCCAGGTG 60.047 66.667 0.00 0.00 35.51 4.00
1006 1049 0.900647 CCGGAGCGGGAGGATTCTAT 60.901 60.000 0.00 0.00 44.15 1.98
1008 1051 2.840102 CCGGAGCGGGAGGATTCT 60.840 66.667 0.00 0.00 44.15 2.40
1164 1207 3.003763 GGAACAGAGCGGGAGGGT 61.004 66.667 0.00 0.00 0.00 4.34
1176 1235 1.598685 GGGCCGAAACGAAGGAACA 60.599 57.895 0.00 0.00 0.00 3.18
1374 1445 2.617308 CAGAGGCACCAGCTTAATCATG 59.383 50.000 0.00 0.00 41.70 3.07
1379 1450 3.439857 AATTCAGAGGCACCAGCTTAA 57.560 42.857 0.00 0.00 41.70 1.85
1555 1629 4.180057 CCAACAAGCTTGCAAACAGTTAA 58.820 39.130 26.27 0.00 0.00 2.01
1615 1690 7.671398 CCCTATAGCAAAGAAACCATGGATAAT 59.329 37.037 21.47 0.30 0.00 1.28
1626 1701 3.181465 CGAGAGCCCCTATAGCAAAGAAA 60.181 47.826 0.00 0.00 0.00 2.52
1628 1703 1.964223 CGAGAGCCCCTATAGCAAAGA 59.036 52.381 0.00 0.00 0.00 2.52
1688 1763 4.630644 AGATGAACAACCACATCACTCT 57.369 40.909 0.00 0.00 43.40 3.24
1689 1764 5.455392 CAAAGATGAACAACCACATCACTC 58.545 41.667 0.00 0.00 43.40 3.51
1694 1769 4.942761 AAGCAAAGATGAACAACCACAT 57.057 36.364 0.00 0.00 0.00 3.21
1723 1798 0.242555 CCGGCAAAACAATAAGGCGT 59.757 50.000 0.00 0.00 46.77 5.68
1726 1801 5.379732 TTTAGACCGGCAAAACAATAAGG 57.620 39.130 0.00 0.00 0.00 2.69
1813 1888 1.243902 AAGTGGCACCAATTACCGTG 58.756 50.000 15.27 0.00 32.21 4.94
1816 1891 3.306019 CCTGAAAAGTGGCACCAATTACC 60.306 47.826 15.27 4.33 32.85 2.85
1819 1894 2.397597 ACCTGAAAAGTGGCACCAATT 58.602 42.857 15.27 6.94 35.67 2.32
1822 1897 2.738587 TTACCTGAAAAGTGGCACCA 57.261 45.000 15.27 3.95 0.00 4.17
1851 1926 4.982916 AGAATTACACATACGGAGATTCGC 59.017 41.667 0.00 0.00 0.00 4.70
1964 2096 1.097547 CCAGGGGCATGTCGATTGAC 61.098 60.000 6.11 6.11 45.71 3.18
1966 2098 1.077501 ACCAGGGGCATGTCGATTG 60.078 57.895 0.00 0.00 0.00 2.67
1967 2099 1.224592 GACCAGGGGCATGTCGATT 59.775 57.895 0.00 0.00 0.00 3.34
1985 2117 1.229975 TGGATCACACAGCAACAGCG 61.230 55.000 0.00 0.00 0.00 5.18
2072 2266 6.671779 ACCTGATAAAAGGAGAGAACTGAGAT 59.328 38.462 0.00 0.00 40.02 2.75
2078 2272 7.391833 ACAATGAACCTGATAAAAGGAGAGAAC 59.608 37.037 0.00 0.00 40.02 3.01
2093 2287 4.687483 GGAGAAAATGCAACAATGAACCTG 59.313 41.667 0.00 0.00 0.00 4.00
2094 2288 4.590222 AGGAGAAAATGCAACAATGAACCT 59.410 37.500 0.00 0.00 0.00 3.50
2099 2293 5.640189 AGAGAGGAGAAAATGCAACAATG 57.360 39.130 0.00 0.00 0.00 2.82
2120 2314 7.967303 GGCAGAAGAGAATGTATTCAGAAAAAG 59.033 37.037 7.30 0.00 39.23 2.27
2139 2333 2.149578 CTGAGAAACCACTGGCAGAAG 58.850 52.381 23.66 14.03 0.00 2.85
2184 2378 6.851222 ACCTGATAGAAAGCGAACAATATG 57.149 37.500 0.00 0.00 0.00 1.78
2241 2435 8.618702 AAATCATTCCAGCAGTAAGATGATAG 57.381 34.615 0.00 0.00 35.00 2.08
2253 2447 8.765488 TCATAAGGAAATAAATCATTCCAGCA 57.235 30.769 7.25 0.00 46.14 4.41
2254 2448 9.071276 TCTCATAAGGAAATAAATCATTCCAGC 57.929 33.333 7.25 0.00 46.14 4.85
2306 2500 4.892934 AGACAAATAACAGACTGGCCAAAA 59.107 37.500 7.01 0.00 0.00 2.44
2341 2543 6.664428 CCTGGTGAAAAGGGAAGAAAATAA 57.336 37.500 0.00 0.00 0.00 1.40
2353 2555 2.171003 GGTTGGATCCCTGGTGAAAAG 58.829 52.381 9.90 0.00 0.00 2.27
2357 2559 0.698238 CAAGGTTGGATCCCTGGTGA 59.302 55.000 9.90 0.00 30.99 4.02
2445 2647 9.465985 TGCATATTAAGCATTTCACATAATGTG 57.534 29.630 1.76 1.76 42.40 3.21
2451 2653 8.252417 TCAACTTGCATATTAAGCATTTCACAT 58.748 29.630 0.00 0.00 42.33 3.21
2452 2654 7.600960 TCAACTTGCATATTAAGCATTTCACA 58.399 30.769 0.00 0.00 42.33 3.58
2453 2655 8.464770 TTCAACTTGCATATTAAGCATTTCAC 57.535 30.769 0.00 0.00 42.33 3.18
2454 2656 9.656040 AATTCAACTTGCATATTAAGCATTTCA 57.344 25.926 0.00 0.00 42.33 2.69
2464 2666 8.898761 TCGGTGTTATAATTCAACTTGCATATT 58.101 29.630 0.00 0.00 0.00 1.28
2465 2667 8.445275 TCGGTGTTATAATTCAACTTGCATAT 57.555 30.769 0.00 0.00 0.00 1.78
2467 2669 6.751514 TCGGTGTTATAATTCAACTTGCAT 57.248 33.333 0.00 0.00 0.00 3.96
2469 2671 7.540745 ACAAATCGGTGTTATAATTCAACTTGC 59.459 33.333 4.91 0.00 0.00 4.01
2470 2672 8.964420 ACAAATCGGTGTTATAATTCAACTTG 57.036 30.769 4.91 3.16 0.00 3.16
2471 2673 9.405587 CAACAAATCGGTGTTATAATTCAACTT 57.594 29.630 4.91 0.00 39.73 2.66
2472 2674 8.573035 ACAACAAATCGGTGTTATAATTCAACT 58.427 29.630 4.91 0.00 39.73 3.16
2473 2675 8.736751 ACAACAAATCGGTGTTATAATTCAAC 57.263 30.769 0.00 0.00 39.73 3.18
2474 2676 9.186323 CAACAACAAATCGGTGTTATAATTCAA 57.814 29.630 0.00 0.00 39.73 2.69
2475 2677 8.353684 ACAACAACAAATCGGTGTTATAATTCA 58.646 29.630 0.00 0.00 39.73 2.57
2476 2678 8.736751 ACAACAACAAATCGGTGTTATAATTC 57.263 30.769 0.00 0.00 39.73 2.17
2477 2679 9.535878 AAACAACAACAAATCGGTGTTATAATT 57.464 25.926 0.00 0.00 39.73 1.40
2479 2681 9.448294 GTAAACAACAACAAATCGGTGTTATAA 57.552 29.630 0.00 0.00 39.73 0.98
2480 2682 8.618677 TGTAAACAACAACAAATCGGTGTTATA 58.381 29.630 0.00 0.00 39.73 0.98
2481 2683 7.481642 TGTAAACAACAACAAATCGGTGTTAT 58.518 30.769 0.00 0.00 39.73 1.89
2490 2966 8.037758 TCAACATTCCTGTAAACAACAACAAAT 58.962 29.630 0.00 0.00 37.74 2.32
2555 3031 4.796606 AGACTGCCCAAGCACATTATAAT 58.203 39.130 0.00 0.00 46.52 1.28
2678 3154 2.642427 TGGCAACACCAGCTATACATG 58.358 47.619 0.00 0.00 46.36 3.21
2832 3310 6.382919 AGTTGGGTATGTTCCTTTAGCTAA 57.617 37.500 0.86 0.86 0.00 3.09
2857 3335 2.254737 CTCTTGGCTGCCCTCCTGAG 62.255 65.000 17.53 11.82 0.00 3.35
2976 3454 6.041637 ACACACTCACCGTACATATGGAATAT 59.958 38.462 7.80 0.00 41.02 1.28
3000 3480 8.906636 TCGACAATGTCTAACTAGTTAATGAC 57.093 34.615 20.36 20.36 0.00 3.06
3039 3519 8.889717 GTTTCGATTATATTTTGACCTCTTCCA 58.110 33.333 0.00 0.00 0.00 3.53
3043 3523 9.838339 AGATGTTTCGATTATATTTTGACCTCT 57.162 29.630 0.00 0.00 0.00 3.69
3044 3524 9.869844 CAGATGTTTCGATTATATTTTGACCTC 57.130 33.333 0.00 0.00 0.00 3.85
3045 3525 9.396022 ACAGATGTTTCGATTATATTTTGACCT 57.604 29.630 0.00 0.00 0.00 3.85
3127 3607 2.039613 CAGCTTTTCTTCCTCTCACCCT 59.960 50.000 0.00 0.00 0.00 4.34
3169 3649 5.494724 CAGTAGCACATGGATATGCCTAAT 58.505 41.667 0.00 0.00 43.12 1.73
3170 3650 4.803924 GCAGTAGCACATGGATATGCCTAA 60.804 45.833 0.00 0.00 43.12 2.69
3222 3703 5.107065 GCGTATAACAGCTTCAACAGAGTTT 60.107 40.000 0.00 0.00 0.00 2.66
3223 3704 4.389077 GCGTATAACAGCTTCAACAGAGTT 59.611 41.667 0.00 0.00 0.00 3.01
3226 3707 4.188247 AGCGTATAACAGCTTCAACAGA 57.812 40.909 0.00 0.00 41.52 3.41
3230 3711 7.812648 ACAATTTTAGCGTATAACAGCTTCAA 58.187 30.769 4.30 0.22 44.15 2.69
3242 3723 5.664294 TGGAGGAGTACAATTTTAGCGTA 57.336 39.130 0.00 0.00 0.00 4.42
3245 3726 4.822350 GGGATGGAGGAGTACAATTTTAGC 59.178 45.833 0.00 0.00 0.00 3.09
3246 3727 5.823045 GTGGGATGGAGGAGTACAATTTTAG 59.177 44.000 0.00 0.00 0.00 1.85
3249 3730 3.591527 TGTGGGATGGAGGAGTACAATTT 59.408 43.478 0.00 0.00 0.00 1.82
3252 3733 2.335681 TGTGGGATGGAGGAGTACAA 57.664 50.000 0.00 0.00 0.00 2.41
3254 3735 6.497259 TCTTATATTGTGGGATGGAGGAGTAC 59.503 42.308 0.00 0.00 0.00 2.73
3255 3736 6.630131 TCTTATATTGTGGGATGGAGGAGTA 58.370 40.000 0.00 0.00 0.00 2.59
3256 3737 5.476983 TCTTATATTGTGGGATGGAGGAGT 58.523 41.667 0.00 0.00 0.00 3.85
3257 3738 6.013032 ACATCTTATATTGTGGGATGGAGGAG 60.013 42.308 0.00 0.00 38.33 3.69
3259 3740 6.131972 ACATCTTATATTGTGGGATGGAGG 57.868 41.667 0.00 0.00 38.33 4.30
3260 3741 8.469309 AAAACATCTTATATTGTGGGATGGAG 57.531 34.615 0.00 0.00 38.33 3.86
3261 3742 8.694540 CAAAAACATCTTATATTGTGGGATGGA 58.305 33.333 0.00 0.00 38.33 3.41
3263 3744 7.980662 TGCAAAAACATCTTATATTGTGGGATG 59.019 33.333 0.00 0.00 39.45 3.51
3264 3745 7.981225 GTGCAAAAACATCTTATATTGTGGGAT 59.019 33.333 0.00 0.00 0.00 3.85
3265 3746 7.319646 GTGCAAAAACATCTTATATTGTGGGA 58.680 34.615 0.00 0.00 0.00 4.37
3266 3747 6.253298 CGTGCAAAAACATCTTATATTGTGGG 59.747 38.462 0.00 0.00 0.00 4.61
3267 3748 6.237542 GCGTGCAAAAACATCTTATATTGTGG 60.238 38.462 0.00 0.00 0.00 4.17
3268 3749 6.527722 AGCGTGCAAAAACATCTTATATTGTG 59.472 34.615 0.00 0.00 0.00 3.33
3269 3750 6.620678 AGCGTGCAAAAACATCTTATATTGT 58.379 32.000 0.00 0.00 0.00 2.71
3270 3751 8.613613 TTAGCGTGCAAAAACATCTTATATTG 57.386 30.769 0.00 0.00 0.00 1.90
3271 3752 9.632807 TTTTAGCGTGCAAAAACATCTTATATT 57.367 25.926 0.00 0.00 0.00 1.28
3272 3753 9.072294 GTTTTAGCGTGCAAAAACATCTTATAT 57.928 29.630 16.06 0.00 42.46 0.86
3273 3754 8.076781 TGTTTTAGCGTGCAAAAACATCTTATA 58.923 29.630 18.58 0.51 45.66 0.98
3274 3755 6.920758 TGTTTTAGCGTGCAAAAACATCTTAT 59.079 30.769 18.58 0.00 45.66 1.73
3275 3756 6.266323 TGTTTTAGCGTGCAAAAACATCTTA 58.734 32.000 18.58 1.66 45.66 2.10
3276 3757 5.105752 TGTTTTAGCGTGCAAAAACATCTT 58.894 33.333 18.58 0.00 45.66 2.40
3277 3758 4.677584 TGTTTTAGCGTGCAAAAACATCT 58.322 34.783 18.58 0.00 45.66 2.90
3281 3762 3.218935 GCTGTTTTAGCGTGCAAAAAC 57.781 42.857 14.68 14.68 43.63 2.43
3292 3773 4.798387 AGACGTTTTTGCAAGCTGTTTTAG 59.202 37.500 0.00 0.00 0.00 1.85
3293 3774 4.739195 AGACGTTTTTGCAAGCTGTTTTA 58.261 34.783 0.00 0.00 0.00 1.52
3294 3775 3.584834 AGACGTTTTTGCAAGCTGTTTT 58.415 36.364 0.00 0.00 0.00 2.43
3295 3776 3.230743 AGACGTTTTTGCAAGCTGTTT 57.769 38.095 0.00 0.00 0.00 2.83
3296 3777 2.939460 AGACGTTTTTGCAAGCTGTT 57.061 40.000 0.00 0.00 0.00 3.16
3297 3778 2.939460 AAGACGTTTTTGCAAGCTGT 57.061 40.000 0.00 0.00 0.00 4.40
3298 3779 6.582295 ACAATATAAGACGTTTTTGCAAGCTG 59.418 34.615 0.00 0.00 0.00 4.24
3299 3780 6.582295 CACAATATAAGACGTTTTTGCAAGCT 59.418 34.615 0.00 0.00 0.00 3.74
3300 3781 6.183359 CCACAATATAAGACGTTTTTGCAAGC 60.183 38.462 0.00 0.00 0.00 4.01
3301 3782 6.307800 CCCACAATATAAGACGTTTTTGCAAG 59.692 38.462 0.00 0.00 0.00 4.01
3302 3783 6.016192 TCCCACAATATAAGACGTTTTTGCAA 60.016 34.615 0.00 0.00 0.00 4.08
3303 3784 5.473846 TCCCACAATATAAGACGTTTTTGCA 59.526 36.000 0.00 0.00 0.00 4.08
3304 3785 5.945155 TCCCACAATATAAGACGTTTTTGC 58.055 37.500 0.00 0.00 0.00 3.68
3305 3786 7.027161 CCTTCCCACAATATAAGACGTTTTTG 58.973 38.462 0.00 0.00 0.00 2.44
3306 3787 6.943718 TCCTTCCCACAATATAAGACGTTTTT 59.056 34.615 0.00 0.00 0.00 1.94
3307 3788 6.478129 TCCTTCCCACAATATAAGACGTTTT 58.522 36.000 0.00 0.00 0.00 2.43
3308 3789 6.057321 TCCTTCCCACAATATAAGACGTTT 57.943 37.500 0.00 0.00 0.00 3.60
3309 3790 5.396436 CCTCCTTCCCACAATATAAGACGTT 60.396 44.000 0.00 0.00 0.00 3.99
3310 3791 4.101119 CCTCCTTCCCACAATATAAGACGT 59.899 45.833 0.00 0.00 0.00 4.34
3311 3792 4.503296 CCCTCCTTCCCACAATATAAGACG 60.503 50.000 0.00 0.00 0.00 4.18
3312 3793 4.658901 TCCCTCCTTCCCACAATATAAGAC 59.341 45.833 0.00 0.00 0.00 3.01
3313 3794 4.903149 TCCCTCCTTCCCACAATATAAGA 58.097 43.478 0.00 0.00 0.00 2.10
3314 3795 4.660771 ACTCCCTCCTTCCCACAATATAAG 59.339 45.833 0.00 0.00 0.00 1.73
3315 3796 4.641868 ACTCCCTCCTTCCCACAATATAA 58.358 43.478 0.00 0.00 0.00 0.98
3316 3797 4.295905 ACTCCCTCCTTCCCACAATATA 57.704 45.455 0.00 0.00 0.00 0.86
3317 3798 3.151542 ACTCCCTCCTTCCCACAATAT 57.848 47.619 0.00 0.00 0.00 1.28
3318 3799 2.661176 ACTCCCTCCTTCCCACAATA 57.339 50.000 0.00 0.00 0.00 1.90
3319 3800 2.661176 TACTCCCTCCTTCCCACAAT 57.339 50.000 0.00 0.00 0.00 2.71
3320 3801 2.661176 ATACTCCCTCCTTCCCACAA 57.339 50.000 0.00 0.00 0.00 3.33
3321 3802 2.045885 AGAATACTCCCTCCTTCCCACA 59.954 50.000 0.00 0.00 0.00 4.17
3322 3803 2.765502 AGAATACTCCCTCCTTCCCAC 58.234 52.381 0.00 0.00 0.00 4.61
3323 3804 3.508952 AAGAATACTCCCTCCTTCCCA 57.491 47.619 0.00 0.00 0.00 4.37
3324 3805 4.475381 AGAAAAGAATACTCCCTCCTTCCC 59.525 45.833 0.00 0.00 0.00 3.97
3325 3806 5.045505 ACAGAAAAGAATACTCCCTCCTTCC 60.046 44.000 0.00 0.00 0.00 3.46
3326 3807 6.056090 ACAGAAAAGAATACTCCCTCCTTC 57.944 41.667 0.00 0.00 0.00 3.46
3327 3808 6.241645 CAACAGAAAAGAATACTCCCTCCTT 58.758 40.000 0.00 0.00 0.00 3.36
3328 3809 5.804771 GCAACAGAAAAGAATACTCCCTCCT 60.805 44.000 0.00 0.00 0.00 3.69
3329 3810 4.396478 GCAACAGAAAAGAATACTCCCTCC 59.604 45.833 0.00 0.00 0.00 4.30
3330 3811 5.249420 AGCAACAGAAAAGAATACTCCCTC 58.751 41.667 0.00 0.00 0.00 4.30
3331 3812 5.248380 AGCAACAGAAAAGAATACTCCCT 57.752 39.130 0.00 0.00 0.00 4.20
3332 3813 5.473504 TGAAGCAACAGAAAAGAATACTCCC 59.526 40.000 0.00 0.00 0.00 4.30
3333 3814 6.560253 TGAAGCAACAGAAAAGAATACTCC 57.440 37.500 0.00 0.00 0.00 3.85
3334 3815 7.810658 TGATGAAGCAACAGAAAAGAATACTC 58.189 34.615 0.00 0.00 0.00 2.59
3335 3816 7.750229 TGATGAAGCAACAGAAAAGAATACT 57.250 32.000 0.00 0.00 0.00 2.12
3336 3817 7.487189 CCATGATGAAGCAACAGAAAAGAATAC 59.513 37.037 0.00 0.00 0.00 1.89
3337 3818 7.394077 TCCATGATGAAGCAACAGAAAAGAATA 59.606 33.333 0.00 0.00 0.00 1.75
3341 3822 5.381174 TCCATGATGAAGCAACAGAAAAG 57.619 39.130 0.00 0.00 0.00 2.27
3351 3832 3.490419 GGTGCATTCTTCCATGATGAAGC 60.490 47.826 6.80 0.00 41.23 3.86
3352 3833 3.067742 GGGTGCATTCTTCCATGATGAAG 59.932 47.826 0.00 0.00 42.52 3.02
3353 3834 3.025978 GGGTGCATTCTTCCATGATGAA 58.974 45.455 0.00 0.00 31.95 2.57
3354 3835 2.025131 TGGGTGCATTCTTCCATGATGA 60.025 45.455 0.00 0.00 0.00 2.92
3355 3836 2.380941 TGGGTGCATTCTTCCATGATG 58.619 47.619 0.00 0.00 0.00 3.07
3356 3837 2.832643 TGGGTGCATTCTTCCATGAT 57.167 45.000 0.00 0.00 0.00 2.45
3357 3838 2.601240 TTGGGTGCATTCTTCCATGA 57.399 45.000 0.00 0.00 0.00 3.07
3358 3839 3.258872 TCTTTTGGGTGCATTCTTCCATG 59.741 43.478 0.00 0.00 0.00 3.66
3359 3840 3.509442 TCTTTTGGGTGCATTCTTCCAT 58.491 40.909 0.00 0.00 0.00 3.41
3360 3841 2.956132 TCTTTTGGGTGCATTCTTCCA 58.044 42.857 0.00 0.00 0.00 3.53
3361 3842 4.335400 TTTCTTTTGGGTGCATTCTTCC 57.665 40.909 0.00 0.00 0.00 3.46
3362 3843 5.540911 TCATTTCTTTTGGGTGCATTCTTC 58.459 37.500 0.00 0.00 0.00 2.87
3363 3844 5.305128 TCTCATTTCTTTTGGGTGCATTCTT 59.695 36.000 0.00 0.00 0.00 2.52
3364 3845 4.834496 TCTCATTTCTTTTGGGTGCATTCT 59.166 37.500 0.00 0.00 0.00 2.40
3365 3846 5.138125 TCTCATTTCTTTTGGGTGCATTC 57.862 39.130 0.00 0.00 0.00 2.67
3366 3847 5.544650 CTTCTCATTTCTTTTGGGTGCATT 58.455 37.500 0.00 0.00 0.00 3.56
3367 3848 4.562143 GCTTCTCATTTCTTTTGGGTGCAT 60.562 41.667 0.00 0.00 0.00 3.96
3368 3849 3.243839 GCTTCTCATTTCTTTTGGGTGCA 60.244 43.478 0.00 0.00 0.00 4.57
3369 3850 3.320626 GCTTCTCATTTCTTTTGGGTGC 58.679 45.455 0.00 0.00 0.00 5.01
3370 3851 3.321682 TGGCTTCTCATTTCTTTTGGGTG 59.678 43.478 0.00 0.00 0.00 4.61
3371 3852 3.575805 TGGCTTCTCATTTCTTTTGGGT 58.424 40.909 0.00 0.00 0.00 4.51
3443 3925 3.261137 TCCATTTGGAATTCATGCAGCAA 59.739 39.130 7.93 0.00 42.18 3.91
3471 3953 5.885449 ATTTCAAATTGACAGGACCCAAA 57.115 34.783 0.00 0.00 0.00 3.28
3537 4019 9.669887 TGGGGATCTTAATTTCAATTTCAAATG 57.330 29.630 0.00 0.00 0.00 2.32
3542 4024 8.708378 AGGATTGGGGATCTTAATTTCAATTTC 58.292 33.333 0.00 0.00 35.02 2.17
3543 4025 8.628368 AGGATTGGGGATCTTAATTTCAATTT 57.372 30.769 0.00 0.00 35.02 1.82
3548 4030 7.298374 AGGTTAGGATTGGGGATCTTAATTTC 58.702 38.462 0.00 0.00 38.23 2.17
3549 4031 7.239080 AGGTTAGGATTGGGGATCTTAATTT 57.761 36.000 0.00 0.00 38.23 1.82
3568 4051 2.245287 ACCAAAACCCAACAGGAGGTTA 59.755 45.455 0.00 0.00 45.68 2.85
3570 4053 0.634465 ACCAAAACCCAACAGGAGGT 59.366 50.000 0.00 0.00 39.89 3.85
3571 4054 1.328279 GACCAAAACCCAACAGGAGG 58.672 55.000 0.00 0.00 39.89 4.30
3603 4086 7.765695 ACTGGATATTTCTCAGCAAAGAAAA 57.234 32.000 14.97 7.49 45.62 2.29
3606 4089 7.394016 TGTAACTGGATATTTCTCAGCAAAGA 58.606 34.615 0.00 0.00 32.19 2.52
3607 4090 7.615582 TGTAACTGGATATTTCTCAGCAAAG 57.384 36.000 0.00 0.00 32.19 2.77
3608 4091 7.994425 TTGTAACTGGATATTTCTCAGCAAA 57.006 32.000 0.00 0.00 32.19 3.68
3609 4092 7.994425 TTTGTAACTGGATATTTCTCAGCAA 57.006 32.000 0.00 0.00 32.19 3.91
3610 4093 7.994425 TTTTGTAACTGGATATTTCTCAGCA 57.006 32.000 0.00 0.00 32.19 4.41
3611 4094 8.462016 ACATTTTGTAACTGGATATTTCTCAGC 58.538 33.333 0.00 0.00 32.19 4.26
3628 4111 5.718724 TGCCATCACATCAACATTTTGTA 57.281 34.783 0.00 0.00 34.02 2.41
3643 4126 4.099419 AGTGAGTAACGTATGATGCCATCA 59.901 41.667 10.29 10.29 44.55 3.07
3644 4127 4.621991 AGTGAGTAACGTATGATGCCATC 58.378 43.478 0.00 0.00 34.31 3.51
3647 4130 5.109903 AGAAAGTGAGTAACGTATGATGCC 58.890 41.667 0.00 0.00 0.00 4.40
3649 4132 8.912787 AACTAGAAAGTGAGTAACGTATGATG 57.087 34.615 0.00 0.00 35.62 3.07
3652 4138 8.967552 AGAAACTAGAAAGTGAGTAACGTATG 57.032 34.615 0.00 0.00 35.62 2.39
3657 4143 9.396938 GTCTGTAGAAACTAGAAAGTGAGTAAC 57.603 37.037 0.00 0.00 35.62 2.50
3662 4148 8.008513 ACAAGTCTGTAGAAACTAGAAAGTGA 57.991 34.615 0.00 0.00 32.41 3.41
3675 4161 4.340097 TCTCGGTTCAAACAAGTCTGTAGA 59.660 41.667 0.00 0.00 33.45 2.59
3676 4162 4.617959 TCTCGGTTCAAACAAGTCTGTAG 58.382 43.478 0.00 0.00 33.45 2.74
3677 4163 4.659111 TCTCGGTTCAAACAAGTCTGTA 57.341 40.909 0.00 0.00 33.45 2.74
3678 4164 3.536956 TCTCGGTTCAAACAAGTCTGT 57.463 42.857 0.00 0.00 37.39 3.41
3679 4165 6.727824 ATTATCTCGGTTCAAACAAGTCTG 57.272 37.500 0.00 0.00 0.00 3.51
3707 4193 9.507329 TTTTCAAATCTCAGTTCTGCTACTTAT 57.493 29.630 0.00 0.00 0.00 1.73
3708 4194 8.902540 TTTTCAAATCTCAGTTCTGCTACTTA 57.097 30.769 0.00 0.00 0.00 2.24
3711 4197 7.643579 AGTTTTTCAAATCTCAGTTCTGCTAC 58.356 34.615 0.00 0.00 0.00 3.58
3734 4223 9.836076 GACAAGTTAAAGTTTGTAAACAAGAGT 57.164 29.630 9.85 0.00 41.30 3.24
3735 4224 9.285770 GGACAAGTTAAAGTTTGTAAACAAGAG 57.714 33.333 9.85 0.00 41.30 2.85
3753 4244 3.627395 TTGACACACAGAGGACAAGTT 57.373 42.857 0.00 0.00 0.00 2.66
3754 4245 3.845781 ATTGACACACAGAGGACAAGT 57.154 42.857 0.00 0.00 0.00 3.16
3763 4258 6.207928 TGTAATTTGCTGAATTGACACACAG 58.792 36.000 8.33 0.00 38.40 3.66
3879 4374 2.969443 AACCACGAAGAAAAGCGATG 57.031 45.000 0.00 0.00 0.00 3.84
3882 4377 2.748461 TGAAACCACGAAGAAAAGCG 57.252 45.000 0.00 0.00 0.00 4.68
3893 4391 6.521151 AGAGAATGGATTTCATGAAACCAC 57.479 37.500 29.03 21.83 35.73 4.16
3915 4413 0.992072 CAGTAACCACGATGCACGAG 59.008 55.000 14.18 7.27 45.77 4.18
3917 4415 4.051457 GTTCCAGTAACCACGATGCACG 62.051 54.545 7.07 7.07 38.89 5.34
3935 4433 2.094078 TGCTAATTGGCTTGCATGGTTC 60.094 45.455 15.31 0.00 0.00 3.62
3945 4443 5.365021 AGTGTCTTAGATGCTAATTGGCT 57.635 39.130 15.31 0.45 0.00 4.75
3947 4445 6.989169 AGCTAAGTGTCTTAGATGCTAATTGG 59.011 38.462 17.31 0.00 0.00 3.16
3950 4449 6.463614 CCCAGCTAAGTGTCTTAGATGCTAAT 60.464 42.308 21.65 0.23 37.16 1.73
3964 4463 5.476945 ACCAGAAATTTAACCCAGCTAAGTG 59.523 40.000 0.00 0.00 0.00 3.16
3972 4471 3.759618 CCGCTAACCAGAAATTTAACCCA 59.240 43.478 0.00 0.00 0.00 4.51
3980 4479 0.258774 ATGGCCCGCTAACCAGAAAT 59.741 50.000 0.00 0.00 39.88 2.17
3984 4483 0.180406 AGTAATGGCCCGCTAACCAG 59.820 55.000 0.00 0.00 39.88 4.00
4133 4634 5.073311 TGGACAGATCTAACTAACTGTGC 57.927 43.478 0.00 0.00 46.42 4.57
4134 4635 6.045318 CCATGGACAGATCTAACTAACTGTG 58.955 44.000 5.56 0.00 42.45 3.66
4135 4636 5.395768 GCCATGGACAGATCTAACTAACTGT 60.396 44.000 18.40 0.00 44.56 3.55
4136 4637 5.053145 GCCATGGACAGATCTAACTAACTG 58.947 45.833 18.40 0.00 36.58 3.16
4138 4639 5.023533 TGCCATGGACAGATCTAACTAAC 57.976 43.478 18.40 0.00 0.00 2.34
4143 4652 8.537728 AATTAAAATGCCATGGACAGATCTAA 57.462 30.769 18.40 9.72 0.00 2.10
4174 4683 8.252964 ACGGATCAGTTAAACTTATTCTTGAC 57.747 34.615 0.00 0.00 0.00 3.18
4194 4703 6.449635 TTTTGCAGCTTCATATAAACGGAT 57.550 33.333 0.00 0.00 0.00 4.18
4196 4705 7.513505 CGAATTTTTGCAGCTTCATATAAACGG 60.514 37.037 0.00 0.00 0.00 4.44
4199 4708 6.255453 GCCGAATTTTTGCAGCTTCATATAAA 59.745 34.615 0.00 0.00 0.00 1.40
4202 4711 4.114794 GCCGAATTTTTGCAGCTTCATAT 58.885 39.130 0.00 0.00 0.00 1.78
4240 4750 7.492669 TCCACGCAAAAAGTTTGATAATCAAAA 59.507 29.630 4.93 0.00 46.53 2.44
4288 4799 2.287849 GCTCTTGCTTGGAAACCTGTTC 60.288 50.000 0.00 0.00 36.03 3.18
4402 4913 0.736325 ACTTACATGTCGGAGTGCGC 60.736 55.000 0.00 0.00 0.00 6.09
4603 5117 4.935352 AATAGTTGGCTGAACAAAAGCA 57.065 36.364 0.00 0.00 42.69 3.91
4702 5216 3.436496 GTGCTAAGACGAGTCCATGTAC 58.564 50.000 0.00 0.00 0.00 2.90
4728 5242 5.247862 TGACAAGATTTGCTCTTCTGCATA 58.752 37.500 0.00 0.00 42.48 3.14
4967 5661 5.610398 CCTACCATCAATACTGTATGCACA 58.390 41.667 0.22 0.00 0.00 4.57
5058 5752 2.225727 GGAGACCGATTTGTTTCCACAC 59.774 50.000 0.00 0.00 38.91 3.82
5059 5753 2.158740 TGGAGACCGATTTGTTTCCACA 60.159 45.455 0.00 0.00 42.68 4.17
5061 5755 2.940994 TGGAGACCGATTTGTTTCCA 57.059 45.000 0.00 0.00 44.63 3.53
5099 5793 3.814283 GTCATCAGGGCAATTCTCAGATC 59.186 47.826 0.00 0.00 0.00 2.75
5120 5814 5.245751 TGGTGAAAACAGCATTATGGAATGT 59.754 36.000 0.00 0.00 43.82 2.71
5167 5863 2.025441 CGCGTTGTGGGTGTTTGG 59.975 61.111 0.00 0.00 0.00 3.28
5191 5887 0.895530 CTCCGTCCTAGAAACCTGCA 59.104 55.000 0.00 0.00 0.00 4.41
5200 5896 2.432444 CATCTAGAGCCTCCGTCCTAG 58.568 57.143 0.00 0.00 0.00 3.02
5206 5902 0.465705 TTTGCCATCTAGAGCCTCCG 59.534 55.000 0.00 0.00 0.00 4.63
5209 5905 5.591877 CACTAAATTTTGCCATCTAGAGCCT 59.408 40.000 0.00 0.00 0.00 4.58
5245 5943 8.915036 AGAATATTCACTAGACTACCACGAAAT 58.085 33.333 17.56 0.00 0.00 2.17
5246 5944 8.289939 AGAATATTCACTAGACTACCACGAAA 57.710 34.615 17.56 0.00 0.00 3.46
5313 6011 1.617850 GGCAAATGAACCATCACCACA 59.382 47.619 0.00 0.00 38.69 4.17
5317 6015 0.536724 GGGGGCAAATGAACCATCAC 59.463 55.000 0.00 0.00 38.69 3.06
5331 6029 2.301583 TCAGCTGTAAAATTTTGGGGGC 59.698 45.455 14.67 11.51 0.00 5.80
5474 6172 6.431234 CCAACTATTAAGTCAAGGATATGGGC 59.569 42.308 0.00 0.00 33.75 5.36
5476 6174 8.980481 AACCAACTATTAAGTCAAGGATATGG 57.020 34.615 0.00 0.00 33.75 2.74
5479 6177 9.555727 GCATAACCAACTATTAAGTCAAGGATA 57.444 33.333 0.00 0.00 33.75 2.59
5480 6178 8.275040 AGCATAACCAACTATTAAGTCAAGGAT 58.725 33.333 0.00 0.00 33.75 3.24
5481 6179 7.630082 AGCATAACCAACTATTAAGTCAAGGA 58.370 34.615 0.00 0.00 33.75 3.36
5482 6180 7.865706 AGCATAACCAACTATTAAGTCAAGG 57.134 36.000 0.00 0.00 33.75 3.61
5512 6213 2.030363 CGCATGCACCCTCTTACAAAAA 60.030 45.455 19.57 0.00 0.00 1.94
5519 6220 1.675641 GGTTCGCATGCACCCTCTT 60.676 57.895 19.57 0.00 0.00 2.85
5537 6238 1.654105 GTGATCTCCGTTTACACAGCG 59.346 52.381 0.00 0.00 0.00 5.18
5572 6273 8.259049 CAGGTTATCTGTATGTCCGTTTAAAA 57.741 34.615 0.00 0.00 38.64 1.52
5631 6332 0.036952 ACCGAACAGACTGCATGGAG 60.037 55.000 13.34 13.34 0.00 3.86
5639 6340 2.005370 TTGGGTAGACCGAACAGACT 57.995 50.000 0.00 0.00 44.64 3.24
5675 6377 2.325082 CCTGGGAACGTTTGAGCCG 61.325 63.158 0.46 0.00 0.00 5.52
5679 6381 3.008594 ACATATGTCCTGGGAACGTTTGA 59.991 43.478 0.46 0.00 0.00 2.69
5687 6389 1.764723 CAGCTCACATATGTCCTGGGA 59.235 52.381 5.07 0.00 0.00 4.37
5693 6418 4.511527 CCCATATCCAGCTCACATATGTC 58.488 47.826 5.07 0.00 31.18 3.06
5734 6459 2.505557 GCCGTTAGTCCGACGTGG 60.506 66.667 0.00 0.00 38.77 4.94
5758 6483 2.440409 GCCTTCAAGAGATTTGGCTCA 58.560 47.619 0.00 0.00 37.37 4.26
5759 6484 1.399791 CGCCTTCAAGAGATTTGGCTC 59.600 52.381 0.00 0.00 38.33 4.70
5760 6485 1.271597 ACGCCTTCAAGAGATTTGGCT 60.272 47.619 0.00 0.00 38.33 4.75
5777 6502 2.626780 GGGCAAAGGACAAGGACGC 61.627 63.158 0.00 0.00 0.00 5.19
5783 6508 0.960364 GCAGATCGGGCAAAGGACAA 60.960 55.000 7.43 0.00 0.00 3.18
5790 6515 2.257409 GAAGAGGGCAGATCGGGCAA 62.257 60.000 20.33 0.00 34.52 4.52
5791 6516 2.688666 AAGAGGGCAGATCGGGCA 60.689 61.111 20.33 0.00 34.52 5.36
5813 6538 2.333014 CAGACGAGGCAGAAAAGAGTC 58.667 52.381 0.00 0.00 0.00 3.36
5814 6539 1.606737 GCAGACGAGGCAGAAAAGAGT 60.607 52.381 0.00 0.00 0.00 3.24
5836 6561 2.202878 GAGCAACGATGGCGGCTA 60.203 61.111 11.43 0.00 43.17 3.93
5860 6588 1.377987 GCGCTATGGTTTGGGGACA 60.378 57.895 0.00 0.00 39.83 4.02
5967 6733 3.505464 AATACAGAGCACGAGGTGTAC 57.495 47.619 0.00 0.00 35.75 2.90
6013 6781 7.770897 GTGACCTACAAATGACCAGAAGAATAT 59.229 37.037 0.00 0.00 0.00 1.28
6021 6789 2.028476 TCGGTGACCTACAAATGACCAG 60.028 50.000 0.00 0.00 0.00 4.00
6164 6946 1.598132 CATGCTCATCTTGCTTCTCCG 59.402 52.381 0.00 0.00 0.00 4.63
6177 6959 3.306989 CCTTGAGGTTCAGTACATGCTCA 60.307 47.826 0.00 0.00 0.00 4.26
6228 7010 1.347707 GTGCCATCGATCCTATCCCAA 59.652 52.381 0.00 0.00 0.00 4.12
6247 7029 4.899352 AGTCATTGTAGAGAAGCCTTGT 57.101 40.909 0.00 0.00 0.00 3.16
6310 7093 0.820226 TCTGCTCATCCGGAAGTGAG 59.180 55.000 24.79 24.79 43.62 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.