Multiple sequence alignment - TraesCS4D01G245700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G245700 chr4D 100.000 3167 0 0 1 3167 414329825 414326659 0.000000e+00 5849.0
1 TraesCS4D01G245700 chr4D 88.412 1096 106 11 1011 2101 414337361 414336282 0.000000e+00 1301.0
2 TraesCS4D01G245700 chr4D 88.402 1095 108 9 1011 2101 414365736 414364657 0.000000e+00 1301.0
3 TraesCS4D01G245700 chr4D 89.407 944 89 5 1161 2104 414359382 414358450 0.000000e+00 1179.0
4 TraesCS4D01G245700 chr4D 83.594 640 91 10 1452 2089 414349728 414349101 3.520000e-164 588.0
5 TraesCS4D01G245700 chr4D 81.081 333 41 8 478 802 414366211 414365893 2.440000e-61 246.0
6 TraesCS4D01G245700 chr4D 77.542 236 30 10 2153 2385 414369512 414369297 1.540000e-23 121.0
7 TraesCS4D01G245700 chr4D 81.633 147 17 6 664 802 414337658 414337514 2.580000e-21 113.0
8 TraesCS4D01G245700 chr4D 75.847 236 31 12 2152 2385 414349019 414348808 2.600000e-16 97.1
9 TraesCS4D01G245700 chr4D 100.000 34 0 0 340 373 414367156 414367123 2.640000e-06 63.9
10 TraesCS4D01G245700 chr4A 93.302 1896 95 16 808 2683 49199451 49201334 0.000000e+00 2769.0
11 TraesCS4D01G245700 chr4A 91.098 674 52 5 1433 2105 49040330 49040996 0.000000e+00 905.0
12 TraesCS4D01G245700 chr4A 92.126 381 19 4 426 802 49199101 49199474 7.780000e-146 527.0
13 TraesCS4D01G245700 chr4A 82.596 339 34 9 1011 1334 49039892 49040220 3.110000e-70 276.0
14 TraesCS4D01G245700 chr4A 81.846 325 45 6 478 802 49039430 49039740 8.710000e-66 261.0
15 TraesCS4D01G245700 chr4A 80.697 373 37 13 2827 3167 466630383 466630752 1.130000e-64 257.0
16 TraesCS4D01G245700 chr4A 93.750 128 8 0 2681 2808 49202199 49202326 3.220000e-45 193.0
17 TraesCS4D01G245700 chr4B 95.609 1708 73 2 810 2516 510435360 510433654 0.000000e+00 2737.0
18 TraesCS4D01G245700 chr4B 85.252 1390 144 28 1011 2364 510482342 510480978 0.000000e+00 1375.0
19 TraesCS4D01G245700 chr4B 88.123 1103 108 9 1011 2104 510562810 510561722 0.000000e+00 1290.0
20 TraesCS4D01G245700 chr4B 94.628 484 21 3 319 802 510435819 510435341 0.000000e+00 745.0
21 TraesCS4D01G245700 chr4B 87.189 281 24 4 2806 3086 658449761 658450029 3.070000e-80 309.0
22 TraesCS4D01G245700 chr4B 81.791 335 36 11 478 802 510482823 510482504 1.130000e-64 257.0
23 TraesCS4D01G245700 chr4B 83.333 282 28 9 478 758 510563288 510563025 3.160000e-60 243.0
24 TraesCS4D01G245700 chr4B 95.161 62 3 0 2747 2808 510433647 510433586 7.230000e-17 99.0
25 TraesCS4D01G245700 chr4B 79.630 162 11 10 2152 2311 510529818 510529677 2.600000e-16 97.1
26 TraesCS4D01G245700 chr3D 95.342 322 12 3 1 319 460502515 460502836 2.820000e-140 508.0
27 TraesCS4D01G245700 chr3D 93.030 330 20 3 1 328 15155090 15155418 2.210000e-131 479.0
28 TraesCS4D01G245700 chr3D 84.872 390 33 3 2804 3167 31855240 31854851 1.390000e-98 370.0
29 TraesCS4D01G245700 chr3D 83.797 395 31 10 2804 3167 463418648 463419040 8.410000e-91 344.0
30 TraesCS4D01G245700 chr7D 95.584 317 12 2 1 315 602844499 602844183 1.010000e-139 507.0
31 TraesCS4D01G245700 chr7D 94.953 317 14 2 1 315 114467593 114467277 2.190000e-136 496.0
32 TraesCS4D01G245700 chr7D 93.827 324 17 3 1 322 603599022 603599344 4.750000e-133 484.0
33 TraesCS4D01G245700 chr7D 84.040 401 31 12 2800 3167 254893845 254894245 3.890000e-94 355.0
34 TraesCS4D01G245700 chr7D 83.770 382 37 15 2803 3167 581478438 581478811 3.910000e-89 339.0
35 TraesCS4D01G245700 chr5D 91.200 375 19 4 2803 3167 285485177 285485547 6.100000e-137 497.0
36 TraesCS4D01G245700 chr5D 93.598 328 15 5 1 323 324580124 324579798 4.750000e-133 484.0
37 TraesCS4D01G245700 chr5D 85.252 278 31 8 2804 3079 449252108 449252377 8.650000e-71 278.0
38 TraesCS4D01G245700 chr6D 94.953 317 14 2 1 315 379093136 379093452 2.190000e-136 496.0
39 TraesCS4D01G245700 chr6D 94.393 321 15 3 1 319 423491661 423491342 1.020000e-134 490.0
40 TraesCS4D01G245700 chr6D 80.714 420 33 13 2793 3167 387405938 387406354 1.860000e-72 283.0
41 TraesCS4D01G245700 chr2D 93.617 329 18 3 1 327 70391201 70390874 3.670000e-134 488.0
42 TraesCS4D01G245700 chr2D 85.787 394 25 8 2804 3167 180539898 180539506 3.830000e-104 388.0
43 TraesCS4D01G245700 chrUn 89.160 369 30 7 2804 3167 98120287 98120650 4.820000e-123 451.0
44 TraesCS4D01G245700 chrUn 84.034 357 47 7 2804 3154 33147342 33147694 5.060000e-88 335.0
45 TraesCS4D01G245700 chr1D 89.037 374 27 4 2806 3167 365304398 365304769 4.820000e-123 451.0
46 TraesCS4D01G245700 chr5A 88.064 377 30 5 2804 3167 362777298 362776924 1.740000e-117 433.0
47 TraesCS4D01G245700 chr5A 84.810 395 28 12 2803 3167 249847862 249847470 4.990000e-98 368.0
48 TraesCS4D01G245700 chr2B 83.715 393 42 13 2795 3167 680102305 680102695 5.030000e-93 351.0
49 TraesCS4D01G245700 chr2B 85.802 162 10 11 3014 3167 545174046 545174202 3.270000e-35 159.0
50 TraesCS4D01G245700 chr7A 83.934 361 38 12 2826 3167 174222680 174223039 8.470000e-86 327.0
51 TraesCS4D01G245700 chr1A 80.412 388 49 12 2804 3167 542827884 542828268 1.450000e-68 270.0
52 TraesCS4D01G245700 chr7B 79.592 343 44 12 2845 3167 670085082 670084746 4.110000e-54 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G245700 chr4D 414326659 414329825 3166 True 5849.000000 5849 100.000000 1 3167 1 chr4D.!!$R1 3166
1 TraesCS4D01G245700 chr4D 414358450 414359382 932 True 1179.000000 1179 89.407000 1161 2104 1 chr4D.!!$R2 943
2 TraesCS4D01G245700 chr4D 414336282 414337658 1376 True 707.000000 1301 85.022500 664 2101 2 chr4D.!!$R3 1437
3 TraesCS4D01G245700 chr4D 414364657 414369512 4855 True 432.975000 1301 86.756250 340 2385 4 chr4D.!!$R5 2045
4 TraesCS4D01G245700 chr4D 414348808 414349728 920 True 342.550000 588 79.720500 1452 2385 2 chr4D.!!$R4 933
5 TraesCS4D01G245700 chr4A 49199101 49202326 3225 False 1163.000000 2769 93.059333 426 2808 3 chr4A.!!$F3 2382
6 TraesCS4D01G245700 chr4A 49039430 49040996 1566 False 480.666667 905 85.180000 478 2105 3 chr4A.!!$F2 1627
7 TraesCS4D01G245700 chr4B 510433586 510435819 2233 True 1193.666667 2737 95.132667 319 2808 3 chr4B.!!$R2 2489
8 TraesCS4D01G245700 chr4B 510480978 510482823 1845 True 816.000000 1375 83.521500 478 2364 2 chr4B.!!$R3 1886
9 TraesCS4D01G245700 chr4B 510561722 510563288 1566 True 766.500000 1290 85.728000 478 2104 2 chr4B.!!$R4 1626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
170 171 0.036732 AACAGATGTGTGGGCGACAT 59.963 50.0 5.42 0.04 36.84 3.06 F
183 184 0.038251 GCGACATCTCTCACACACCA 60.038 55.0 0.00 0.00 0.00 4.17 F
189 190 0.102300 TCTCTCACACACCACACACG 59.898 55.0 0.00 0.00 0.00 4.49 F
209 210 0.108804 CGAGTTGTCCTACGTGGCAT 60.109 55.0 0.00 0.00 35.26 4.40 F
297 298 0.110486 AGTTGGCTAACCCCACAGTG 59.890 55.0 9.60 0.00 37.52 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1064 3956 5.658634 AGATGATCTAGGAAGCTGTGTGTTA 59.341 40.000 0.0 0.0 0.00 2.41 R
1960 5051 5.861251 CAGTAAGATTAGCTAGAGATTGCCG 59.139 44.000 0.0 0.0 0.00 5.69 R
2028 5119 6.810911 TGGCACAATATTGTTAAACACAAGT 58.189 32.000 18.5 0.0 42.40 3.16 R
2108 5200 8.375506 ACCATTACTAGATTGTTCTGTTGAGAA 58.624 33.333 0.0 0.0 35.75 2.87 R
2454 5583 5.239359 TGCACTTACATGAATCTCAATGC 57.761 39.130 0.0 0.0 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.627515 ACACATGACAACTGACAGCT 57.372 45.000 0.00 0.00 0.00 4.24
21 22 2.923121 ACACATGACAACTGACAGCTT 58.077 42.857 0.00 0.00 0.00 3.74
22 23 2.615447 ACACATGACAACTGACAGCTTG 59.385 45.455 0.00 8.97 0.00 4.01
24 25 1.538512 CATGACAACTGACAGCTTGGG 59.461 52.381 16.80 1.88 0.00 4.12
26 27 0.947244 GACAACTGACAGCTTGGGTG 59.053 55.000 16.80 0.00 37.06 4.61
28 29 0.664761 CAACTGACAGCTTGGGTGTG 59.335 55.000 7.10 0.00 44.55 3.82
29 30 0.466189 AACTGACAGCTTGGGTGTGG 60.466 55.000 7.10 3.23 44.55 4.17
30 31 1.601759 CTGACAGCTTGGGTGTGGG 60.602 63.158 7.10 0.00 44.55 4.61
32 33 1.302832 GACAGCTTGGGTGTGGGAG 60.303 63.158 7.10 0.00 44.55 4.30
34 35 1.002868 CAGCTTGGGTGTGGGAGAG 60.003 63.158 0.00 0.00 0.00 3.20
35 36 2.227036 AGCTTGGGTGTGGGAGAGG 61.227 63.158 0.00 0.00 0.00 3.69
37 38 1.986413 CTTGGGTGTGGGAGAGGAG 59.014 63.158 0.00 0.00 0.00 3.69
38 39 1.538876 TTGGGTGTGGGAGAGGAGG 60.539 63.158 0.00 0.00 0.00 4.30
39 40 3.403558 GGGTGTGGGAGAGGAGGC 61.404 72.222 0.00 0.00 0.00 4.70
41 42 3.775654 GTGTGGGAGAGGAGGCGG 61.776 72.222 0.00 0.00 0.00 6.13
74 75 2.258286 GGCAAACGCCCACACATC 59.742 61.111 0.00 0.00 44.46 3.06
75 76 2.560119 GGCAAACGCCCACACATCA 61.560 57.895 0.00 0.00 44.46 3.07
76 77 1.081242 GCAAACGCCCACACATCAG 60.081 57.895 0.00 0.00 0.00 2.90
78 79 2.268076 AAACGCCCACACATCAGCC 61.268 57.895 0.00 0.00 0.00 4.85
80 81 4.415150 CGCCCACACATCAGCCCT 62.415 66.667 0.00 0.00 0.00 5.19
82 83 2.345760 GCCCACACATCAGCCCTTG 61.346 63.158 0.00 0.00 0.00 3.61
83 84 1.075482 CCCACACATCAGCCCTTGT 59.925 57.895 0.00 0.00 0.00 3.16
84 85 1.246056 CCCACACATCAGCCCTTGTG 61.246 60.000 8.49 8.49 46.76 3.33
85 86 1.582968 CACACATCAGCCCTTGTGC 59.417 57.895 9.65 0.00 45.59 4.57
86 87 1.968017 ACACATCAGCCCTTGTGCG 60.968 57.895 9.65 0.00 45.59 5.34
87 88 1.968017 CACATCAGCCCTTGTGCGT 60.968 57.895 0.00 0.00 37.08 5.24
88 89 1.968017 ACATCAGCCCTTGTGCGTG 60.968 57.895 0.00 0.00 36.02 5.34
90 91 1.672356 ATCAGCCCTTGTGCGTGAC 60.672 57.895 0.00 0.00 36.02 3.67
91 92 2.116983 ATCAGCCCTTGTGCGTGACT 62.117 55.000 0.00 0.00 36.02 3.41
92 93 1.005037 CAGCCCTTGTGCGTGACTA 60.005 57.895 0.00 0.00 36.02 2.59
93 94 0.602638 CAGCCCTTGTGCGTGACTAA 60.603 55.000 0.00 0.00 36.02 2.24
94 95 0.107831 AGCCCTTGTGCGTGACTAAA 59.892 50.000 0.00 0.00 36.02 1.85
95 96 0.948678 GCCCTTGTGCGTGACTAAAA 59.051 50.000 0.00 0.00 0.00 1.52
96 97 1.335496 GCCCTTGTGCGTGACTAAAAA 59.665 47.619 0.00 0.00 0.00 1.94
97 98 2.857104 GCCCTTGTGCGTGACTAAAAAC 60.857 50.000 0.00 0.00 0.00 2.43
98 99 2.616842 CCCTTGTGCGTGACTAAAAACT 59.383 45.455 0.00 0.00 0.00 2.66
99 100 3.548014 CCCTTGTGCGTGACTAAAAACTG 60.548 47.826 0.00 0.00 0.00 3.16
100 101 3.311322 CCTTGTGCGTGACTAAAAACTGA 59.689 43.478 0.00 0.00 0.00 3.41
101 102 4.024048 CCTTGTGCGTGACTAAAAACTGAT 60.024 41.667 0.00 0.00 0.00 2.90
102 103 4.466567 TGTGCGTGACTAAAAACTGATG 57.533 40.909 0.00 0.00 0.00 3.07
103 104 3.874543 TGTGCGTGACTAAAAACTGATGT 59.125 39.130 0.00 0.00 0.00 3.06
104 105 5.051153 TGTGCGTGACTAAAAACTGATGTA 58.949 37.500 0.00 0.00 0.00 2.29
106 107 6.015504 GTGCGTGACTAAAAACTGATGTATG 58.984 40.000 0.00 0.00 0.00 2.39
107 108 5.121611 TGCGTGACTAAAAACTGATGTATGG 59.878 40.000 0.00 0.00 0.00 2.74
108 109 5.447279 GCGTGACTAAAAACTGATGTATGGG 60.447 44.000 0.00 0.00 0.00 4.00
110 111 4.634004 TGACTAAAAACTGATGTATGGGCG 59.366 41.667 0.00 0.00 0.00 6.13
111 112 4.839121 ACTAAAAACTGATGTATGGGCGA 58.161 39.130 0.00 0.00 0.00 5.54
112 113 5.250200 ACTAAAAACTGATGTATGGGCGAA 58.750 37.500 0.00 0.00 0.00 4.70
113 114 4.434713 AAAAACTGATGTATGGGCGAAC 57.565 40.909 0.00 0.00 0.00 3.95
116 117 0.940126 CTGATGTATGGGCGAACTGC 59.060 55.000 0.00 0.00 45.38 4.40
117 118 0.541392 TGATGTATGGGCGAACTGCT 59.459 50.000 0.00 0.00 45.43 4.24
118 119 1.760029 TGATGTATGGGCGAACTGCTA 59.240 47.619 0.00 0.00 45.43 3.49
120 121 2.772077 TGTATGGGCGAACTGCTAAA 57.228 45.000 0.00 0.00 45.43 1.85
121 122 2.352388 TGTATGGGCGAACTGCTAAAC 58.648 47.619 0.00 0.00 45.43 2.01
122 123 1.326548 GTATGGGCGAACTGCTAAACG 59.673 52.381 0.00 0.00 45.43 3.60
125 126 2.479198 GCGAACTGCTAAACGCCC 59.521 61.111 0.00 0.00 44.27 6.13
126 127 2.322081 GCGAACTGCTAAACGCCCA 61.322 57.895 0.00 0.00 44.27 5.36
127 128 1.495951 CGAACTGCTAAACGCCCAC 59.504 57.895 0.00 0.00 38.05 4.61
128 129 1.225376 CGAACTGCTAAACGCCCACA 61.225 55.000 0.00 0.00 38.05 4.17
129 130 0.237498 GAACTGCTAAACGCCCACAC 59.763 55.000 0.00 0.00 38.05 3.82
130 131 0.464735 AACTGCTAAACGCCCACACA 60.465 50.000 0.00 0.00 38.05 3.72
131 132 1.164041 ACTGCTAAACGCCCACACAC 61.164 55.000 0.00 0.00 38.05 3.82
132 133 1.852067 CTGCTAAACGCCCACACACC 61.852 60.000 0.00 0.00 38.05 4.16
133 134 2.961669 GCTAAACGCCCACACACCG 61.962 63.158 0.00 0.00 0.00 4.94
134 135 2.280933 TAAACGCCCACACACCGG 60.281 61.111 0.00 0.00 0.00 5.28
151 152 2.751688 GCCCCTCCGTGTGGTAAA 59.248 61.111 0.00 0.00 36.30 2.01
153 154 1.239296 GCCCCTCCGTGTGGTAAAAC 61.239 60.000 0.00 0.00 36.30 2.43
155 156 1.519408 CCCTCCGTGTGGTAAAACAG 58.481 55.000 0.00 0.00 36.30 3.16
157 158 2.290071 CCCTCCGTGTGGTAAAACAGAT 60.290 50.000 0.00 0.00 36.30 2.90
158 159 2.742053 CCTCCGTGTGGTAAAACAGATG 59.258 50.000 0.00 0.00 36.30 2.90
159 160 3.399330 CTCCGTGTGGTAAAACAGATGT 58.601 45.455 0.00 0.00 36.30 3.06
160 161 3.135225 TCCGTGTGGTAAAACAGATGTG 58.865 45.455 0.00 0.00 36.30 3.21
163 164 3.303725 CGTGTGGTAAAACAGATGTGTGG 60.304 47.826 0.00 0.00 36.84 4.17
164 165 3.004315 GTGTGGTAAAACAGATGTGTGGG 59.996 47.826 0.00 0.00 36.84 4.61
165 166 2.030274 GTGGTAAAACAGATGTGTGGGC 60.030 50.000 0.00 0.00 36.84 5.36
167 168 2.147958 GTAAAACAGATGTGTGGGCGA 58.852 47.619 0.00 0.00 36.84 5.54
168 169 0.951558 AAAACAGATGTGTGGGCGAC 59.048 50.000 0.00 0.00 36.84 5.19
169 170 0.179032 AAACAGATGTGTGGGCGACA 60.179 50.000 0.00 0.00 36.84 4.35
170 171 0.036732 AACAGATGTGTGGGCGACAT 59.963 50.000 5.42 0.04 36.84 3.06
171 172 0.391661 ACAGATGTGTGGGCGACATC 60.392 55.000 5.42 9.85 46.85 3.06
172 173 4.941609 GATGTGTGGGCGACATCT 57.058 55.556 5.42 0.00 44.28 2.90
174 175 0.176680 GATGTGTGGGCGACATCTCT 59.823 55.000 5.42 0.00 44.28 3.10
175 176 0.176680 ATGTGTGGGCGACATCTCTC 59.823 55.000 5.42 0.00 36.78 3.20
177 178 0.737715 GTGTGGGCGACATCTCTCAC 60.738 60.000 5.42 0.00 36.78 3.51
178 179 1.184970 TGTGGGCGACATCTCTCACA 61.185 55.000 0.38 0.38 33.48 3.58
179 180 0.737715 GTGGGCGACATCTCTCACAC 60.738 60.000 0.00 0.00 0.00 3.82
183 184 0.038251 GCGACATCTCTCACACACCA 60.038 55.000 0.00 0.00 0.00 4.17
184 185 1.702886 CGACATCTCTCACACACCAC 58.297 55.000 0.00 0.00 0.00 4.16
186 187 2.408050 GACATCTCTCACACACCACAC 58.592 52.381 0.00 0.00 0.00 3.82
187 188 1.762370 ACATCTCTCACACACCACACA 59.238 47.619 0.00 0.00 0.00 3.72
188 189 2.138320 CATCTCTCACACACCACACAC 58.862 52.381 0.00 0.00 0.00 3.82
189 190 0.102300 TCTCTCACACACCACACACG 59.898 55.000 0.00 0.00 0.00 4.49
190 191 1.490693 CTCTCACACACCACACACGC 61.491 60.000 0.00 0.00 0.00 5.34
191 192 2.870341 CTCACACACCACACACGCG 61.870 63.158 3.53 3.53 0.00 6.01
193 194 2.584970 ACACACCACACACGCGAG 60.585 61.111 15.93 7.88 0.00 5.03
195 196 2.171079 CACACCACACACGCGAGTT 61.171 57.895 15.93 0.00 46.40 3.01
196 197 2.171079 ACACCACACACGCGAGTTG 61.171 57.895 15.93 9.00 46.40 3.16
197 198 2.171079 CACCACACACGCGAGTTGT 61.171 57.895 15.93 9.84 46.40 3.32
198 199 1.881252 ACCACACACGCGAGTTGTC 60.881 57.895 15.93 0.00 46.40 3.18
200 201 1.591594 CACACACGCGAGTTGTCCT 60.592 57.895 15.93 0.00 46.40 3.85
201 202 0.318360 CACACACGCGAGTTGTCCTA 60.318 55.000 15.93 0.00 46.40 2.94
202 203 0.318445 ACACACGCGAGTTGTCCTAC 60.318 55.000 15.93 0.00 46.40 3.18
203 204 1.081641 ACACGCGAGTTGTCCTACG 60.082 57.895 15.93 0.00 46.40 3.51
206 207 1.800315 CGCGAGTTGTCCTACGTGG 60.800 63.158 0.00 0.00 33.59 4.94
207 208 2.092882 GCGAGTTGTCCTACGTGGC 61.093 63.158 0.00 0.00 35.26 5.01
208 209 1.287815 CGAGTTGTCCTACGTGGCA 59.712 57.895 0.00 0.00 35.26 4.92
209 210 0.108804 CGAGTTGTCCTACGTGGCAT 60.109 55.000 0.00 0.00 35.26 4.40
210 211 1.133598 CGAGTTGTCCTACGTGGCATA 59.866 52.381 0.00 0.00 35.26 3.14
211 212 2.537401 GAGTTGTCCTACGTGGCATAC 58.463 52.381 0.00 0.00 35.26 2.39
212 213 1.897133 AGTTGTCCTACGTGGCATACA 59.103 47.619 0.00 0.00 35.26 2.29
213 214 2.300723 AGTTGTCCTACGTGGCATACAA 59.699 45.455 0.00 3.47 35.26 2.41
214 215 3.068560 GTTGTCCTACGTGGCATACAAA 58.931 45.455 12.06 0.00 33.61 2.83
215 216 3.404224 TGTCCTACGTGGCATACAAAA 57.596 42.857 0.00 0.00 35.26 2.44
216 217 3.945346 TGTCCTACGTGGCATACAAAAT 58.055 40.909 0.00 0.00 35.26 1.82
217 218 3.936453 TGTCCTACGTGGCATACAAAATC 59.064 43.478 0.00 0.00 35.26 2.17
218 219 3.936453 GTCCTACGTGGCATACAAAATCA 59.064 43.478 0.00 0.00 35.26 2.57
219 220 4.034048 GTCCTACGTGGCATACAAAATCAG 59.966 45.833 0.00 0.00 35.26 2.90
220 221 2.919666 ACGTGGCATACAAAATCAGC 57.080 45.000 0.00 0.00 0.00 4.26
221 222 2.436417 ACGTGGCATACAAAATCAGCT 58.564 42.857 0.00 0.00 0.00 4.24
222 223 3.605634 ACGTGGCATACAAAATCAGCTA 58.394 40.909 0.00 0.00 0.00 3.32
223 224 4.006989 ACGTGGCATACAAAATCAGCTAA 58.993 39.130 0.00 0.00 0.00 3.09
224 225 4.640201 ACGTGGCATACAAAATCAGCTAAT 59.360 37.500 0.00 0.00 0.00 1.73
225 226 5.125417 ACGTGGCATACAAAATCAGCTAATT 59.875 36.000 0.00 0.00 0.00 1.40
226 227 5.682862 CGTGGCATACAAAATCAGCTAATTC 59.317 40.000 0.00 0.00 0.00 2.17
227 228 5.682862 GTGGCATACAAAATCAGCTAATTCG 59.317 40.000 0.00 0.00 0.00 3.34
228 229 5.356751 TGGCATACAAAATCAGCTAATTCGT 59.643 36.000 0.00 0.00 0.00 3.85
229 230 5.682862 GGCATACAAAATCAGCTAATTCGTG 59.317 40.000 0.00 0.00 0.00 4.35
230 231 5.172053 GCATACAAAATCAGCTAATTCGTGC 59.828 40.000 0.00 0.00 0.00 5.34
231 232 4.096732 ACAAAATCAGCTAATTCGTGCC 57.903 40.909 0.00 0.00 0.00 5.01
232 233 3.119495 ACAAAATCAGCTAATTCGTGCCC 60.119 43.478 0.00 0.00 0.00 5.36
233 234 2.418368 AATCAGCTAATTCGTGCCCA 57.582 45.000 0.00 0.00 0.00 5.36
234 235 1.959042 ATCAGCTAATTCGTGCCCAG 58.041 50.000 0.00 0.00 0.00 4.45
239 240 1.261619 GCTAATTCGTGCCCAGATTCG 59.738 52.381 0.00 0.00 0.00 3.34
240 241 2.550978 CTAATTCGTGCCCAGATTCGT 58.449 47.619 0.00 0.00 0.00 3.85
241 242 1.086696 AATTCGTGCCCAGATTCGTG 58.913 50.000 0.00 0.00 0.00 4.35
243 244 2.723586 TTCGTGCCCAGATTCGTGCA 62.724 55.000 0.00 0.00 0.00 4.57
244 245 2.743752 CGTGCCCAGATTCGTGCAG 61.744 63.158 0.00 0.00 33.80 4.41
246 247 0.955428 GTGCCCAGATTCGTGCAGAA 60.955 55.000 0.00 0.00 43.93 3.02
247 248 0.674581 TGCCCAGATTCGTGCAGAAG 60.675 55.000 0.00 0.00 42.92 2.85
248 249 0.674895 GCCCAGATTCGTGCAGAAGT 60.675 55.000 0.00 0.00 42.92 3.01
249 250 1.813513 CCCAGATTCGTGCAGAAGTT 58.186 50.000 0.00 0.00 42.92 2.66
250 251 2.935238 GCCCAGATTCGTGCAGAAGTTA 60.935 50.000 0.00 0.00 42.92 2.24
251 252 2.673368 CCCAGATTCGTGCAGAAGTTAC 59.327 50.000 0.00 0.00 42.92 2.50
252 253 3.589988 CCAGATTCGTGCAGAAGTTACT 58.410 45.455 0.00 0.00 42.92 2.24
253 254 3.369147 CCAGATTCGTGCAGAAGTTACTG 59.631 47.826 0.00 0.00 42.92 2.74
254 255 3.369147 CAGATTCGTGCAGAAGTTACTGG 59.631 47.826 0.00 0.00 42.92 4.00
258 259 2.433868 GTGCAGAAGTTACTGGACGA 57.566 50.000 0.00 0.00 45.71 4.20
259 260 2.960819 GTGCAGAAGTTACTGGACGAT 58.039 47.619 0.00 0.00 45.71 3.73
260 261 2.668457 GTGCAGAAGTTACTGGACGATG 59.332 50.000 0.00 0.00 45.71 3.84
261 262 2.560981 TGCAGAAGTTACTGGACGATGA 59.439 45.455 0.00 0.00 38.22 2.92
262 263 3.195610 TGCAGAAGTTACTGGACGATGAT 59.804 43.478 0.00 0.00 38.22 2.45
264 265 4.678044 GCAGAAGTTACTGGACGATGATGA 60.678 45.833 0.00 0.00 38.22 2.92
266 267 5.518128 CAGAAGTTACTGGACGATGATGAAG 59.482 44.000 0.00 0.00 34.64 3.02
267 268 5.419155 AGAAGTTACTGGACGATGATGAAGA 59.581 40.000 0.00 0.00 0.00 2.87
269 270 2.568696 ACTGGACGATGATGAAGACG 57.431 50.000 0.00 0.00 0.00 4.18
270 271 1.819288 ACTGGACGATGATGAAGACGT 59.181 47.619 0.00 0.00 41.57 4.34
271 272 2.188524 CTGGACGATGATGAAGACGTG 58.811 52.381 0.00 0.00 39.04 4.49
272 273 1.544246 TGGACGATGATGAAGACGTGT 59.456 47.619 0.00 0.00 39.04 4.49
274 275 1.920574 GACGATGATGAAGACGTGTGG 59.079 52.381 0.00 0.00 39.04 4.17
275 276 1.280982 CGATGATGAAGACGTGTGGG 58.719 55.000 0.00 0.00 0.00 4.61
276 277 1.404181 CGATGATGAAGACGTGTGGGT 60.404 52.381 0.00 0.00 0.00 4.51
277 278 2.002586 GATGATGAAGACGTGTGGGTG 58.997 52.381 0.00 0.00 0.00 4.61
279 280 1.000843 TGATGAAGACGTGTGGGTGAG 59.999 52.381 0.00 0.00 0.00 3.51
280 281 1.000955 GATGAAGACGTGTGGGTGAGT 59.999 52.381 0.00 0.00 0.00 3.41
281 282 0.828022 TGAAGACGTGTGGGTGAGTT 59.172 50.000 0.00 0.00 0.00 3.01
282 283 1.217882 GAAGACGTGTGGGTGAGTTG 58.782 55.000 0.00 0.00 0.00 3.16
283 284 0.179056 AAGACGTGTGGGTGAGTTGG 60.179 55.000 0.00 0.00 0.00 3.77
284 285 2.203153 ACGTGTGGGTGAGTTGGC 60.203 61.111 0.00 0.00 0.00 4.52
285 286 2.111043 CGTGTGGGTGAGTTGGCT 59.889 61.111 0.00 0.00 0.00 4.75
288 289 1.235724 GTGTGGGTGAGTTGGCTAAC 58.764 55.000 4.51 4.51 37.06 2.34
291 292 4.736739 GGTGAGTTGGCTAACCCC 57.263 61.111 9.60 3.85 39.88 4.95
292 293 1.765074 GGTGAGTTGGCTAACCCCA 59.235 57.895 9.60 5.48 39.88 4.96
297 298 0.110486 AGTTGGCTAACCCCACAGTG 59.890 55.000 9.60 0.00 37.52 3.66
299 300 0.179004 TTGGCTAACCCCACAGTGTG 60.179 55.000 16.70 16.70 33.82 3.82
308 309 4.447544 CACAGTGTGGGCGTTACA 57.552 55.556 15.86 0.00 0.00 2.41
309 310 1.938861 CACAGTGTGGGCGTTACAC 59.061 57.895 15.86 9.42 46.67 2.90
314 315 2.394545 GTGTGGGCGTTACACTTTTC 57.605 50.000 9.98 0.00 43.79 2.29
315 316 1.671845 GTGTGGGCGTTACACTTTTCA 59.328 47.619 9.98 0.00 43.79 2.69
316 317 2.097791 GTGTGGGCGTTACACTTTTCAA 59.902 45.455 9.98 0.00 43.79 2.69
317 318 2.753452 TGTGGGCGTTACACTTTTCAAA 59.247 40.909 7.55 0.00 39.52 2.69
318 319 3.381908 TGTGGGCGTTACACTTTTCAAAT 59.618 39.130 7.55 0.00 39.52 2.32
319 320 4.579340 TGTGGGCGTTACACTTTTCAAATA 59.421 37.500 7.55 0.00 39.52 1.40
320 321 5.067413 TGTGGGCGTTACACTTTTCAAATAA 59.933 36.000 7.55 0.00 39.52 1.40
321 322 5.978322 GTGGGCGTTACACTTTTCAAATAAA 59.022 36.000 0.00 0.00 35.98 1.40
322 323 6.476053 GTGGGCGTTACACTTTTCAAATAAAA 59.524 34.615 0.00 0.00 35.98 1.52
323 324 7.010275 GTGGGCGTTACACTTTTCAAATAAAAA 59.990 33.333 0.00 0.00 35.98 1.94
515 3340 6.540914 TCTTGAGGAACAAACAATTACGTTCT 59.459 34.615 0.00 0.00 38.23 3.01
594 3419 2.894731 AGGAACAGAGGAGACACATCA 58.105 47.619 0.00 0.00 0.00 3.07
605 3430 3.076621 GAGACACATCATTTGGCAGACA 58.923 45.455 0.00 0.00 0.00 3.41
747 3576 6.881602 GTCCATTTCTTCAGAAAGTATCAGGT 59.118 38.462 7.97 0.00 45.87 4.00
790 3644 9.442047 TTGGTATTATAAGGCAAACAAAAATGG 57.558 29.630 0.00 0.00 0.00 3.16
791 3645 8.816894 TGGTATTATAAGGCAAACAAAAATGGA 58.183 29.630 0.00 0.00 0.00 3.41
792 3646 9.093970 GGTATTATAAGGCAAACAAAAATGGAC 57.906 33.333 0.00 0.00 0.00 4.02
793 3647 9.093970 GTATTATAAGGCAAACAAAAATGGACC 57.906 33.333 0.00 0.00 0.00 4.46
794 3648 3.922171 AAGGCAAACAAAAATGGACCA 57.078 38.095 0.00 0.00 0.00 4.02
795 3649 4.436113 AAGGCAAACAAAAATGGACCAT 57.564 36.364 0.00 0.00 0.00 3.55
796 3650 5.559148 AAGGCAAACAAAAATGGACCATA 57.441 34.783 7.59 0.00 0.00 2.74
797 3651 4.893608 AGGCAAACAAAAATGGACCATAC 58.106 39.130 7.59 0.00 0.00 2.39
798 3652 3.677596 GGCAAACAAAAATGGACCATACG 59.322 43.478 7.59 0.00 0.00 3.06
799 3653 4.303282 GCAAACAAAAATGGACCATACGT 58.697 39.130 7.59 0.00 0.00 3.57
800 3654 4.149747 GCAAACAAAAATGGACCATACGTG 59.850 41.667 7.59 8.37 0.00 4.49
801 3655 5.285651 CAAACAAAAATGGACCATACGTGT 58.714 37.500 7.59 9.00 0.00 4.49
802 3656 5.523438 AACAAAAATGGACCATACGTGTT 57.477 34.783 17.61 17.61 0.00 3.32
803 3657 4.865776 ACAAAAATGGACCATACGTGTTG 58.134 39.130 7.59 6.70 0.00 3.33
804 3658 4.339814 ACAAAAATGGACCATACGTGTTGT 59.660 37.500 7.59 7.36 0.00 3.32
805 3659 5.163499 ACAAAAATGGACCATACGTGTTGTT 60.163 36.000 7.59 0.00 0.00 2.83
806 3660 5.523438 AAAATGGACCATACGTGTTGTTT 57.477 34.783 7.59 0.00 0.00 2.83
807 3661 4.759516 AATGGACCATACGTGTTGTTTC 57.240 40.909 7.59 0.00 0.00 2.78
810 3664 3.945921 TGGACCATACGTGTTGTTTCAAA 59.054 39.130 0.00 0.00 0.00 2.69
852 3713 6.841286 GTCTGCGCGCATATACAATATTAATC 59.159 38.462 36.48 6.68 0.00 1.75
954 3846 3.379240 CACCTACGAATCAGCTGATCAG 58.621 50.000 28.83 25.01 32.75 2.90
1064 3956 5.337491 GGAACAAACACATAAGCATCCCAAT 60.337 40.000 0.00 0.00 0.00 3.16
1138 4050 1.692042 AGGGGCATCCAGAGACAGG 60.692 63.158 0.00 0.00 38.24 4.00
1388 4397 6.875948 AGCATACACACACTTAATTCAACA 57.124 33.333 0.00 0.00 0.00 3.33
1546 4636 0.179004 ACCCGATGTTCTGCAAACCA 60.179 50.000 8.60 0.00 0.00 3.67
1781 4872 3.940221 TGTGTGCAAGTTACTAAAACCGT 59.060 39.130 0.00 0.00 0.00 4.83
1840 4931 2.633488 GGTTCAAGATAGCTGGTCACC 58.367 52.381 0.00 0.00 0.00 4.02
2067 5158 0.918258 TGCCAGCTGGATGGACATTA 59.082 50.000 37.21 6.94 43.57 1.90
2416 5545 7.876068 TGGGTGACTAACAAATAACTGAACTAG 59.124 37.037 0.00 0.00 0.00 2.57
2481 5610 7.509141 TTGAGATTCATGTAAGTGCAAAAGA 57.491 32.000 0.00 0.00 0.00 2.52
2534 5663 9.449719 ACTAAGAAATGACTATTTGAAATCGGT 57.550 29.630 0.00 0.00 36.66 4.69
2549 5678 6.395629 TGAAATCGGTCGAGAAATAGTTCTT 58.604 36.000 6.91 0.00 44.42 2.52
2560 5689 9.537192 TCGAGAAATAGTTCTTTTACAACTGAA 57.463 29.630 6.91 0.00 44.42 3.02
2625 5754 4.074970 CCTTGGAAGCACTGACTATTTGT 58.925 43.478 0.00 0.00 0.00 2.83
2649 5778 3.127548 GTCGGTCGTAGTATTCTTGGTGA 59.872 47.826 0.00 0.00 0.00 4.02
2650 5779 3.949754 TCGGTCGTAGTATTCTTGGTGAT 59.050 43.478 0.00 0.00 0.00 3.06
2672 5801 4.636435 AGCGGGTGTTTGGGGTCG 62.636 66.667 0.00 0.00 0.00 4.79
2678 5807 1.324383 GGTGTTTGGGGTCGACATTT 58.676 50.000 18.91 0.00 0.00 2.32
2688 6684 2.621526 GGGTCGACATTTTTGTGACCTT 59.378 45.455 18.91 0.00 46.52 3.50
2716 6712 3.190535 GTCCAGTGTGTCAACAACAAGTT 59.809 43.478 0.00 0.00 40.31 2.66
2777 6773 3.795623 TGCTTATCGTCCTCCTTGTAC 57.204 47.619 0.00 0.00 0.00 2.90
2778 6774 3.362706 TGCTTATCGTCCTCCTTGTACT 58.637 45.455 0.00 0.00 0.00 2.73
2808 6804 5.318630 GTCTAGGTCCACCTCCTATAAGAG 58.681 50.000 0.09 0.00 44.77 2.85
2809 6805 2.965562 AGGTCCACCTCCTATAAGAGC 58.034 52.381 0.00 0.00 44.77 4.09
2810 6806 2.247635 AGGTCCACCTCCTATAAGAGCA 59.752 50.000 0.00 0.00 44.77 4.26
2811 6807 3.116551 AGGTCCACCTCCTATAAGAGCAT 60.117 47.826 0.00 0.00 44.77 3.79
2812 6808 3.259625 GGTCCACCTCCTATAAGAGCATC 59.740 52.174 0.00 0.00 32.17 3.91
2814 6810 8.903062 AGGTCCACCTCCTATAAGAGCATCTC 62.903 50.000 0.00 0.00 45.49 2.75
2823 6819 3.805267 GAGCATCTCCAGCCGTTG 58.195 61.111 0.00 0.00 0.00 4.10
2848 6844 2.880890 CCTCCAGGAGGCATAAAAATCG 59.119 50.000 23.54 0.00 43.29 3.34
2849 6845 2.291741 CTCCAGGAGGCATAAAAATCGC 59.708 50.000 8.88 0.00 33.74 4.58
2850 6846 1.338020 CCAGGAGGCATAAAAATCGCC 59.662 52.381 0.00 0.00 46.62 5.54
2853 6849 4.319249 GGCATAAAAATCGCCGCC 57.681 55.556 0.00 0.00 35.79 6.13
2854 6850 1.733526 GGCATAAAAATCGCCGCCT 59.266 52.632 0.00 0.00 35.79 5.52
2855 6851 0.594796 GGCATAAAAATCGCCGCCTG 60.595 55.000 0.00 0.00 35.79 4.85
2856 6852 0.594796 GCATAAAAATCGCCGCCTGG 60.595 55.000 0.00 0.00 38.77 4.45
2857 6853 0.030638 CATAAAAATCGCCGCCTGGG 59.969 55.000 0.00 0.00 39.58 4.45
2869 6865 4.760047 CCTGGGGGCGAGTCAACG 62.760 72.222 0.00 0.00 0.00 4.10
2870 6866 4.760047 CTGGGGGCGAGTCAACGG 62.760 72.222 0.00 0.00 0.00 4.44
2872 6868 3.384532 GGGGGCGAGTCAACGGTA 61.385 66.667 0.00 0.00 0.00 4.02
2873 6869 2.728435 GGGGGCGAGTCAACGGTAT 61.728 63.158 0.00 0.00 0.00 2.73
2874 6870 1.394266 GGGGGCGAGTCAACGGTATA 61.394 60.000 0.00 0.00 0.00 1.47
2875 6871 0.461135 GGGGCGAGTCAACGGTATAA 59.539 55.000 0.00 0.00 0.00 0.98
2876 6872 1.069668 GGGGCGAGTCAACGGTATAAT 59.930 52.381 0.00 0.00 0.00 1.28
2877 6873 2.401351 GGGCGAGTCAACGGTATAATC 58.599 52.381 0.00 0.00 0.00 1.75
2878 6874 2.035576 GGGCGAGTCAACGGTATAATCT 59.964 50.000 0.00 0.00 0.00 2.40
2879 6875 3.050619 GGCGAGTCAACGGTATAATCTG 58.949 50.000 0.00 0.00 0.00 2.90
2880 6876 2.471743 GCGAGTCAACGGTATAATCTGC 59.528 50.000 0.00 0.00 0.00 4.26
2881 6877 3.795826 GCGAGTCAACGGTATAATCTGCT 60.796 47.826 0.00 0.00 0.00 4.24
2882 6878 3.975670 CGAGTCAACGGTATAATCTGCTC 59.024 47.826 0.00 0.00 0.00 4.26
2883 6879 4.261238 CGAGTCAACGGTATAATCTGCTCT 60.261 45.833 0.00 0.00 0.00 4.09
2884 6880 4.938080 AGTCAACGGTATAATCTGCTCTG 58.062 43.478 0.00 0.00 0.00 3.35
2885 6881 4.051922 GTCAACGGTATAATCTGCTCTGG 58.948 47.826 0.00 0.00 0.00 3.86
2886 6882 3.069586 TCAACGGTATAATCTGCTCTGGG 59.930 47.826 0.00 0.00 0.00 4.45
2887 6883 1.971357 ACGGTATAATCTGCTCTGGGG 59.029 52.381 0.00 0.00 0.00 4.96
2888 6884 1.276421 CGGTATAATCTGCTCTGGGGG 59.724 57.143 0.00 0.00 0.00 5.40
2889 6885 1.003696 GGTATAATCTGCTCTGGGGGC 59.996 57.143 0.00 0.00 0.00 5.80
2890 6886 0.976641 TATAATCTGCTCTGGGGGCG 59.023 55.000 0.00 0.00 0.00 6.13
2891 6887 1.772819 ATAATCTGCTCTGGGGGCGG 61.773 60.000 0.00 0.00 37.41 6.13
2927 6923 4.394712 CCCCCAGGCGCCGATATC 62.395 72.222 23.20 0.00 0.00 1.63
2928 6924 4.742201 CCCCAGGCGCCGATATCG 62.742 72.222 23.20 18.31 39.44 2.92
2940 6936 2.704725 CGATATCGGCCCATTTTTGG 57.295 50.000 17.51 0.00 35.37 3.28
2946 6942 4.055654 GCCCATTTTTGGCGCAAA 57.944 50.000 10.83 0.00 39.48 3.68
2947 6943 2.553962 GCCCATTTTTGGCGCAAAT 58.446 47.368 10.83 3.74 39.48 2.32
2948 6944 0.168568 GCCCATTTTTGGCGCAAATG 59.831 50.000 19.43 19.43 39.48 2.32
2949 6945 1.521580 CCCATTTTTGGCGCAAATGT 58.478 45.000 22.59 1.87 39.18 2.71
2950 6946 1.197264 CCCATTTTTGGCGCAAATGTG 59.803 47.619 22.59 12.95 39.18 3.21
2959 6955 3.860717 GCAAATGTGCCCGCTTTC 58.139 55.556 0.00 0.00 45.68 2.62
2960 6956 2.088178 GCAAATGTGCCCGCTTTCG 61.088 57.895 0.00 0.00 45.68 3.46
2972 6968 1.059942 CGCTTTCGGTGAAAAATGGC 58.940 50.000 0.00 0.00 30.84 4.40
2973 6969 1.428448 GCTTTCGGTGAAAAATGGCC 58.572 50.000 0.00 0.00 30.84 5.36
2974 6970 1.939381 GCTTTCGGTGAAAAATGGCCC 60.939 52.381 0.00 0.00 30.84 5.80
2975 6971 0.315568 TTTCGGTGAAAAATGGCCCG 59.684 50.000 0.00 0.00 39.98 6.13
2976 6972 0.537600 TTCGGTGAAAAATGGCCCGA 60.538 50.000 0.00 0.00 45.21 5.14
2977 6973 0.322997 TCGGTGAAAAATGGCCCGAT 60.323 50.000 0.00 0.00 42.33 4.18
2978 6974 1.065345 TCGGTGAAAAATGGCCCGATA 60.065 47.619 0.00 0.00 42.33 2.92
2979 6975 1.953686 CGGTGAAAAATGGCCCGATAT 59.046 47.619 0.00 0.00 41.08 1.63
2980 6976 2.031157 CGGTGAAAAATGGCCCGATATC 60.031 50.000 0.00 0.00 41.08 1.63
2981 6977 2.031157 GGTGAAAAATGGCCCGATATCG 60.031 50.000 18.31 18.31 39.44 2.92
2991 6987 2.979808 CGATATCGGCGCGAATCG 59.020 61.111 17.51 18.58 39.99 3.34
2992 6988 2.497092 CGATATCGGCGCGAATCGG 61.497 63.158 17.51 0.00 39.97 4.18
2999 6995 2.742372 GCGCGAATCGGCCCATAT 60.742 61.111 12.10 0.00 38.94 1.78
3000 6996 2.325082 GCGCGAATCGGCCCATATT 61.325 57.895 12.10 0.00 38.94 1.28
3001 6997 1.787847 CGCGAATCGGCCCATATTC 59.212 57.895 0.00 3.55 33.78 1.75
3003 6999 2.456000 CGAATCGGCCCATATTCGG 58.544 57.895 24.44 12.62 46.63 4.30
3004 7000 1.635663 CGAATCGGCCCATATTCGGC 61.636 60.000 24.44 2.38 46.63 5.54
3009 7005 4.134623 GCCCATATTCGGCGTGAA 57.865 55.556 6.85 0.00 41.81 3.18
3011 7007 0.951558 GCCCATATTCGGCGTGAATT 59.048 50.000 6.85 0.00 45.06 2.17
3012 7008 1.069227 GCCCATATTCGGCGTGAATTC 60.069 52.381 6.85 0.00 45.06 2.17
3013 7009 2.494059 CCCATATTCGGCGTGAATTCT 58.506 47.619 6.85 0.00 45.06 2.40
3014 7010 2.480419 CCCATATTCGGCGTGAATTCTC 59.520 50.000 6.85 1.90 45.06 2.87
3015 7011 3.130633 CCATATTCGGCGTGAATTCTCA 58.869 45.455 6.85 0.00 45.06 3.27
3016 7012 3.559655 CCATATTCGGCGTGAATTCTCAA 59.440 43.478 6.85 0.00 45.06 3.02
3017 7013 4.518217 CATATTCGGCGTGAATTCTCAAC 58.482 43.478 6.85 0.00 45.06 3.18
3018 7014 1.872388 TTCGGCGTGAATTCTCAACA 58.128 45.000 6.85 0.00 31.88 3.33
3019 7015 2.093306 TCGGCGTGAATTCTCAACAT 57.907 45.000 6.85 0.00 31.88 2.71
3020 7016 3.239587 TCGGCGTGAATTCTCAACATA 57.760 42.857 6.85 0.00 31.88 2.29
3021 7017 3.591023 TCGGCGTGAATTCTCAACATAA 58.409 40.909 6.85 0.00 31.88 1.90
3022 7018 3.997681 TCGGCGTGAATTCTCAACATAAA 59.002 39.130 6.85 0.00 31.88 1.40
3023 7019 4.634004 TCGGCGTGAATTCTCAACATAAAT 59.366 37.500 6.85 0.00 31.88 1.40
3024 7020 5.813157 TCGGCGTGAATTCTCAACATAAATA 59.187 36.000 6.85 0.00 31.88 1.40
3025 7021 6.314152 TCGGCGTGAATTCTCAACATAAATAA 59.686 34.615 6.85 0.00 31.88 1.40
3026 7022 7.011950 TCGGCGTGAATTCTCAACATAAATAAT 59.988 33.333 6.85 0.00 31.88 1.28
3027 7023 7.643764 CGGCGTGAATTCTCAACATAAATAATT 59.356 33.333 7.05 0.00 31.88 1.40
3028 7024 9.301153 GGCGTGAATTCTCAACATAAATAATTT 57.699 29.630 7.05 0.00 31.88 1.82
3058 7054 8.797350 ATCACATAGTTCATCACAGAAAATCA 57.203 30.769 0.00 0.00 0.00 2.57
3059 7055 8.620116 TCACATAGTTCATCACAGAAAATCAA 57.380 30.769 0.00 0.00 0.00 2.57
3060 7056 9.234827 TCACATAGTTCATCACAGAAAATCAAT 57.765 29.630 0.00 0.00 0.00 2.57
3126 7122 9.585099 AATAAAAATGCATATTTCATCACACGT 57.415 25.926 0.00 0.00 35.50 4.49
3127 7123 7.510428 AAAAATGCATATTTCATCACACGTC 57.490 32.000 0.00 0.00 35.50 4.34
3128 7124 3.923827 TGCATATTTCATCACACGTCG 57.076 42.857 0.00 0.00 0.00 5.12
3129 7125 3.516615 TGCATATTTCATCACACGTCGA 58.483 40.909 0.00 0.00 0.00 4.20
3130 7126 3.551485 TGCATATTTCATCACACGTCGAG 59.449 43.478 0.00 0.00 0.00 4.04
3131 7127 3.602491 GCATATTTCATCACACGTCGAGC 60.602 47.826 0.00 0.00 0.00 5.03
3132 7128 2.370281 ATTTCATCACACGTCGAGCT 57.630 45.000 0.00 0.00 0.00 4.09
3133 7129 3.503827 ATTTCATCACACGTCGAGCTA 57.496 42.857 0.00 0.00 0.00 3.32
3134 7130 2.544480 TTCATCACACGTCGAGCTAG 57.456 50.000 0.00 0.00 0.00 3.42
3135 7131 0.733150 TCATCACACGTCGAGCTAGG 59.267 55.000 0.00 0.00 0.00 3.02
3136 7132 0.867753 CATCACACGTCGAGCTAGGC 60.868 60.000 0.00 0.00 0.00 3.93
3137 7133 1.313091 ATCACACGTCGAGCTAGGCA 61.313 55.000 0.00 0.00 0.00 4.75
3138 7134 1.139734 CACACGTCGAGCTAGGCAT 59.860 57.895 0.00 0.00 0.00 4.40
3139 7135 0.867753 CACACGTCGAGCTAGGCATC 60.868 60.000 0.00 0.00 0.00 3.91
3140 7136 1.655654 CACGTCGAGCTAGGCATCG 60.656 63.158 0.00 0.45 40.26 3.84
3141 7137 2.727647 CGTCGAGCTAGGCATCGC 60.728 66.667 0.00 0.00 38.79 4.58
3151 7147 4.496336 GGCATCGCCCTTGAGCCT 62.496 66.667 0.00 0.00 44.06 4.58
3152 7148 2.899339 GCATCGCCCTTGAGCCTC 60.899 66.667 0.00 0.00 0.00 4.70
3153 7149 2.203126 CATCGCCCTTGAGCCTCC 60.203 66.667 0.00 0.00 0.00 4.30
3154 7150 2.688666 ATCGCCCTTGAGCCTCCA 60.689 61.111 0.00 0.00 0.00 3.86
3155 7151 2.074948 ATCGCCCTTGAGCCTCCAT 61.075 57.895 0.00 0.00 0.00 3.41
3156 7152 0.764369 ATCGCCCTTGAGCCTCCATA 60.764 55.000 0.00 0.00 0.00 2.74
3157 7153 0.980754 TCGCCCTTGAGCCTCCATAA 60.981 55.000 0.00 0.00 0.00 1.90
3158 7154 0.533755 CGCCCTTGAGCCTCCATAAG 60.534 60.000 0.00 0.00 0.00 1.73
3159 7155 0.548510 GCCCTTGAGCCTCCATAAGT 59.451 55.000 0.00 0.00 0.00 2.24
3160 7156 1.748591 GCCCTTGAGCCTCCATAAGTG 60.749 57.143 0.00 0.00 0.00 3.16
3161 7157 1.673168 CCTTGAGCCTCCATAAGTGC 58.327 55.000 0.00 0.00 0.00 4.40
3162 7158 1.211457 CCTTGAGCCTCCATAAGTGCT 59.789 52.381 0.00 0.00 35.15 4.40
3163 7159 2.559440 CTTGAGCCTCCATAAGTGCTC 58.441 52.381 3.51 3.51 43.26 4.26
3164 7160 0.833287 TGAGCCTCCATAAGTGCTCC 59.167 55.000 7.78 0.00 42.76 4.70
3165 7161 0.833287 GAGCCTCCATAAGTGCTCCA 59.167 55.000 0.00 0.00 40.02 3.86
3166 7162 0.543749 AGCCTCCATAAGTGCTCCAC 59.456 55.000 0.00 0.00 28.82 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.031420 CCAAGCTGTCAGTTGTCATGTG 60.031 50.000 0.93 0.00 0.00 3.21
3 4 2.224606 CCAAGCTGTCAGTTGTCATGT 58.775 47.619 0.93 0.00 0.00 3.21
4 5 1.538512 CCCAAGCTGTCAGTTGTCATG 59.461 52.381 0.93 0.00 0.00 3.07
7 8 0.947244 CACCCAAGCTGTCAGTTGTC 59.053 55.000 0.93 0.00 0.00 3.18
8 9 0.255890 ACACCCAAGCTGTCAGTTGT 59.744 50.000 0.93 0.00 0.00 3.32
9 10 0.664761 CACACCCAAGCTGTCAGTTG 59.335 55.000 0.93 5.16 0.00 3.16
10 11 0.466189 CCACACCCAAGCTGTCAGTT 60.466 55.000 0.93 0.00 0.00 3.16
11 12 1.149174 CCACACCCAAGCTGTCAGT 59.851 57.895 0.93 0.00 0.00 3.41
12 13 1.601759 CCCACACCCAAGCTGTCAG 60.602 63.158 0.00 0.00 0.00 3.51
13 14 2.055689 CTCCCACACCCAAGCTGTCA 62.056 60.000 0.00 0.00 0.00 3.58
14 15 1.302832 CTCCCACACCCAAGCTGTC 60.303 63.158 0.00 0.00 0.00 3.51
15 16 1.770110 TCTCCCACACCCAAGCTGT 60.770 57.895 0.00 0.00 0.00 4.40
16 17 1.002868 CTCTCCCACACCCAAGCTG 60.003 63.158 0.00 0.00 0.00 4.24
17 18 2.227036 CCTCTCCCACACCCAAGCT 61.227 63.158 0.00 0.00 0.00 3.74
19 20 1.557269 CCTCCTCTCCCACACCCAAG 61.557 65.000 0.00 0.00 0.00 3.61
20 21 1.538876 CCTCCTCTCCCACACCCAA 60.539 63.158 0.00 0.00 0.00 4.12
21 22 2.122729 CCTCCTCTCCCACACCCA 59.877 66.667 0.00 0.00 0.00 4.51
22 23 3.403558 GCCTCCTCTCCCACACCC 61.404 72.222 0.00 0.00 0.00 4.61
24 25 3.775654 CCGCCTCCTCTCCCACAC 61.776 72.222 0.00 0.00 0.00 3.82
43 44 4.758251 TGCCATCTCGCCCACACG 62.758 66.667 0.00 0.00 0.00 4.49
45 46 1.971167 GTTTGCCATCTCGCCCACA 60.971 57.895 0.00 0.00 0.00 4.17
46 47 2.877691 GTTTGCCATCTCGCCCAC 59.122 61.111 0.00 0.00 0.00 4.61
47 48 2.745884 CGTTTGCCATCTCGCCCA 60.746 61.111 0.00 0.00 0.00 5.36
48 49 4.179579 GCGTTTGCCATCTCGCCC 62.180 66.667 0.00 0.00 42.33 6.13
58 59 1.081242 CTGATGTGTGGGCGTTTGC 60.081 57.895 0.00 0.00 41.71 3.68
59 60 1.081242 GCTGATGTGTGGGCGTTTG 60.081 57.895 0.00 0.00 0.00 2.93
60 61 2.268076 GGCTGATGTGTGGGCGTTT 61.268 57.895 0.00 0.00 0.00 3.60
62 63 4.722700 GGGCTGATGTGTGGGCGT 62.723 66.667 0.00 0.00 0.00 5.68
63 64 3.925630 AAGGGCTGATGTGTGGGCG 62.926 63.158 0.00 0.00 0.00 6.13
64 65 2.036256 AAGGGCTGATGTGTGGGC 59.964 61.111 0.00 0.00 0.00 5.36
65 66 1.075482 ACAAGGGCTGATGTGTGGG 59.925 57.895 0.00 0.00 0.00 4.61
66 67 1.870055 GCACAAGGGCTGATGTGTGG 61.870 60.000 15.45 0.00 46.68 4.17
67 68 1.582968 GCACAAGGGCTGATGTGTG 59.417 57.895 15.45 9.16 46.68 3.82
68 69 1.968017 CGCACAAGGGCTGATGTGT 60.968 57.895 15.45 0.00 46.68 3.72
70 71 1.968017 CACGCACAAGGGCTGATGT 60.968 57.895 0.00 0.00 0.00 3.06
71 72 1.672030 TCACGCACAAGGGCTGATG 60.672 57.895 0.00 0.00 0.00 3.07
72 73 1.672356 GTCACGCACAAGGGCTGAT 60.672 57.895 0.00 0.00 0.00 2.90
74 75 0.602638 TTAGTCACGCACAAGGGCTG 60.603 55.000 0.00 0.00 0.00 4.85
75 76 0.107831 TTTAGTCACGCACAAGGGCT 59.892 50.000 0.00 0.00 0.00 5.19
76 77 0.948678 TTTTAGTCACGCACAAGGGC 59.051 50.000 0.00 0.00 0.00 5.19
78 79 3.311322 TCAGTTTTTAGTCACGCACAAGG 59.689 43.478 0.00 0.00 0.00 3.61
80 81 4.334203 ACATCAGTTTTTAGTCACGCACAA 59.666 37.500 0.00 0.00 0.00 3.33
82 83 4.468095 ACATCAGTTTTTAGTCACGCAC 57.532 40.909 0.00 0.00 0.00 5.34
83 84 5.121611 CCATACATCAGTTTTTAGTCACGCA 59.878 40.000 0.00 0.00 0.00 5.24
84 85 5.447279 CCCATACATCAGTTTTTAGTCACGC 60.447 44.000 0.00 0.00 0.00 5.34
85 86 5.447279 GCCCATACATCAGTTTTTAGTCACG 60.447 44.000 0.00 0.00 0.00 4.35
86 87 5.447279 CGCCCATACATCAGTTTTTAGTCAC 60.447 44.000 0.00 0.00 0.00 3.67
87 88 4.634004 CGCCCATACATCAGTTTTTAGTCA 59.366 41.667 0.00 0.00 0.00 3.41
88 89 4.873827 TCGCCCATACATCAGTTTTTAGTC 59.126 41.667 0.00 0.00 0.00 2.59
90 91 5.354234 AGTTCGCCCATACATCAGTTTTTAG 59.646 40.000 0.00 0.00 0.00 1.85
91 92 5.123186 CAGTTCGCCCATACATCAGTTTTTA 59.877 40.000 0.00 0.00 0.00 1.52
92 93 4.079253 AGTTCGCCCATACATCAGTTTTT 58.921 39.130 0.00 0.00 0.00 1.94
93 94 3.440173 CAGTTCGCCCATACATCAGTTTT 59.560 43.478 0.00 0.00 0.00 2.43
94 95 3.009723 CAGTTCGCCCATACATCAGTTT 58.990 45.455 0.00 0.00 0.00 2.66
95 96 2.632377 CAGTTCGCCCATACATCAGTT 58.368 47.619 0.00 0.00 0.00 3.16
96 97 1.743772 GCAGTTCGCCCATACATCAGT 60.744 52.381 0.00 0.00 32.94 3.41
97 98 0.940126 GCAGTTCGCCCATACATCAG 59.060 55.000 0.00 0.00 32.94 2.90
98 99 0.541392 AGCAGTTCGCCCATACATCA 59.459 50.000 0.00 0.00 44.04 3.07
99 100 2.526304 TAGCAGTTCGCCCATACATC 57.474 50.000 0.00 0.00 44.04 3.06
100 101 2.943033 GTTTAGCAGTTCGCCCATACAT 59.057 45.455 0.00 0.00 44.04 2.29
101 102 2.352388 GTTTAGCAGTTCGCCCATACA 58.648 47.619 0.00 0.00 44.04 2.29
102 103 1.326548 CGTTTAGCAGTTCGCCCATAC 59.673 52.381 0.00 0.00 44.04 2.39
103 104 1.647346 CGTTTAGCAGTTCGCCCATA 58.353 50.000 0.00 0.00 44.04 2.74
104 105 2.466867 CGTTTAGCAGTTCGCCCAT 58.533 52.632 0.00 0.00 44.04 4.00
116 117 2.322081 CCGGTGTGTGGGCGTTTAG 61.322 63.158 0.00 0.00 0.00 1.85
117 118 2.280933 CCGGTGTGTGGGCGTTTA 60.281 61.111 0.00 0.00 0.00 2.01
133 134 2.414658 TTTTACCACACGGAGGGGCC 62.415 60.000 0.00 0.00 35.59 5.80
134 135 1.073548 TTTTACCACACGGAGGGGC 59.926 57.895 0.00 0.00 35.59 5.80
135 136 0.108963 TGTTTTACCACACGGAGGGG 59.891 55.000 0.00 0.00 35.59 4.79
136 137 1.071071 TCTGTTTTACCACACGGAGGG 59.929 52.381 0.00 0.00 35.59 4.30
137 138 2.536761 TCTGTTTTACCACACGGAGG 57.463 50.000 0.00 0.00 35.59 4.30
138 139 3.186409 CACATCTGTTTTACCACACGGAG 59.814 47.826 0.00 0.00 31.74 4.63
140 141 2.875933 ACACATCTGTTTTACCACACGG 59.124 45.455 0.00 0.00 38.77 4.94
141 142 3.303725 CCACACATCTGTTTTACCACACG 60.304 47.826 0.00 0.00 0.00 4.49
142 143 3.004315 CCCACACATCTGTTTTACCACAC 59.996 47.826 0.00 0.00 0.00 3.82
143 144 3.218453 CCCACACATCTGTTTTACCACA 58.782 45.455 0.00 0.00 0.00 4.17
144 145 2.030274 GCCCACACATCTGTTTTACCAC 60.030 50.000 0.00 0.00 0.00 4.16
147 148 2.095919 GTCGCCCACACATCTGTTTTAC 60.096 50.000 0.00 0.00 0.00 2.01
148 149 2.147958 GTCGCCCACACATCTGTTTTA 58.852 47.619 0.00 0.00 0.00 1.52
149 150 0.951558 GTCGCCCACACATCTGTTTT 59.048 50.000 0.00 0.00 0.00 2.43
151 152 0.036732 ATGTCGCCCACACATCTGTT 59.963 50.000 0.00 0.00 38.04 3.16
153 154 2.387309 GATGTCGCCCACACATCTG 58.613 57.895 6.87 0.00 44.65 2.90
157 158 1.184970 TGAGAGATGTCGCCCACACA 61.185 55.000 0.00 0.00 38.04 3.72
158 159 0.737715 GTGAGAGATGTCGCCCACAC 60.738 60.000 7.74 0.00 38.04 3.82
159 160 1.184970 TGTGAGAGATGTCGCCCACA 61.185 55.000 10.19 10.19 40.18 4.17
160 161 0.737715 GTGTGAGAGATGTCGCCCAC 60.738 60.000 0.00 0.00 0.00 4.61
163 164 0.737715 GGTGTGTGAGAGATGTCGCC 60.738 60.000 0.00 0.00 0.00 5.54
164 165 0.038251 TGGTGTGTGAGAGATGTCGC 60.038 55.000 0.00 0.00 0.00 5.19
165 166 1.000274 TGTGGTGTGTGAGAGATGTCG 60.000 52.381 0.00 0.00 0.00 4.35
167 168 1.762370 TGTGTGGTGTGTGAGAGATGT 59.238 47.619 0.00 0.00 0.00 3.06
168 169 2.138320 GTGTGTGGTGTGTGAGAGATG 58.862 52.381 0.00 0.00 0.00 2.90
169 170 1.269778 CGTGTGTGGTGTGTGAGAGAT 60.270 52.381 0.00 0.00 0.00 2.75
170 171 0.102300 CGTGTGTGGTGTGTGAGAGA 59.898 55.000 0.00 0.00 0.00 3.10
171 172 1.490693 GCGTGTGTGGTGTGTGAGAG 61.491 60.000 0.00 0.00 0.00 3.20
172 173 1.520564 GCGTGTGTGGTGTGTGAGA 60.521 57.895 0.00 0.00 0.00 3.27
174 175 2.888051 CGCGTGTGTGGTGTGTGA 60.888 61.111 0.00 0.00 0.00 3.58
175 176 2.870341 CTCGCGTGTGTGGTGTGTG 61.870 63.158 5.77 0.00 0.00 3.82
177 178 2.171079 AACTCGCGTGTGTGGTGTG 61.171 57.895 15.31 0.00 0.00 3.82
178 179 2.171079 CAACTCGCGTGTGTGGTGT 61.171 57.895 15.31 0.00 0.00 4.16
179 180 2.089433 GACAACTCGCGTGTGTGGTG 62.089 60.000 15.45 11.49 0.00 4.17
183 184 0.318445 GTAGGACAACTCGCGTGTGT 60.318 55.000 15.31 14.20 0.00 3.72
184 185 1.334992 CGTAGGACAACTCGCGTGTG 61.335 60.000 15.31 11.22 0.00 3.82
186 187 1.081641 ACGTAGGACAACTCGCGTG 60.082 57.895 5.77 6.24 38.75 5.34
187 188 1.081641 CACGTAGGACAACTCGCGT 60.082 57.895 5.77 0.00 40.11 6.01
188 189 1.800315 CCACGTAGGACAACTCGCG 60.800 63.158 0.00 0.00 41.22 5.87
189 190 2.092882 GCCACGTAGGACAACTCGC 61.093 63.158 8.04 0.00 41.22 5.03
190 191 0.108804 ATGCCACGTAGGACAACTCG 60.109 55.000 8.04 0.00 41.22 4.18
191 192 2.094390 TGTATGCCACGTAGGACAACTC 60.094 50.000 8.04 3.04 41.22 3.01
193 194 2.373540 TGTATGCCACGTAGGACAAC 57.626 50.000 8.04 0.00 41.22 3.32
195 196 3.404224 TTTTGTATGCCACGTAGGACA 57.596 42.857 8.04 6.08 41.22 4.02
196 197 3.936453 TGATTTTGTATGCCACGTAGGAC 59.064 43.478 8.04 0.00 41.22 3.85
197 198 4.188462 CTGATTTTGTATGCCACGTAGGA 58.812 43.478 8.04 0.00 41.22 2.94
198 199 3.242739 GCTGATTTTGTATGCCACGTAGG 60.243 47.826 0.00 0.00 41.84 3.18
200 201 3.605634 AGCTGATTTTGTATGCCACGTA 58.394 40.909 0.00 0.00 0.00 3.57
201 202 2.436417 AGCTGATTTTGTATGCCACGT 58.564 42.857 0.00 0.00 0.00 4.49
202 203 4.614555 TTAGCTGATTTTGTATGCCACG 57.385 40.909 0.00 0.00 0.00 4.94
203 204 5.682862 CGAATTAGCTGATTTTGTATGCCAC 59.317 40.000 5.07 0.00 0.00 5.01
206 207 5.172053 GCACGAATTAGCTGATTTTGTATGC 59.828 40.000 5.07 7.53 0.00 3.14
207 208 5.682862 GGCACGAATTAGCTGATTTTGTATG 59.317 40.000 5.07 1.95 0.00 2.39
208 209 5.221048 GGGCACGAATTAGCTGATTTTGTAT 60.221 40.000 5.07 0.00 0.00 2.29
209 210 4.095782 GGGCACGAATTAGCTGATTTTGTA 59.904 41.667 5.07 0.00 0.00 2.41
210 211 3.119495 GGGCACGAATTAGCTGATTTTGT 60.119 43.478 5.07 4.90 0.00 2.83
211 212 3.119531 TGGGCACGAATTAGCTGATTTTG 60.120 43.478 5.07 7.19 0.00 2.44
212 213 3.088532 TGGGCACGAATTAGCTGATTTT 58.911 40.909 5.07 0.00 0.00 1.82
213 214 2.684881 CTGGGCACGAATTAGCTGATTT 59.315 45.455 5.07 0.00 0.00 2.17
214 215 2.092968 TCTGGGCACGAATTAGCTGATT 60.093 45.455 2.91 2.91 0.00 2.57
215 216 1.486310 TCTGGGCACGAATTAGCTGAT 59.514 47.619 0.00 0.00 0.00 2.90
216 217 0.901827 TCTGGGCACGAATTAGCTGA 59.098 50.000 0.00 0.00 0.00 4.26
217 218 1.959042 ATCTGGGCACGAATTAGCTG 58.041 50.000 0.00 0.00 0.00 4.24
218 219 2.565841 GAATCTGGGCACGAATTAGCT 58.434 47.619 0.00 0.00 0.00 3.32
219 220 1.261619 CGAATCTGGGCACGAATTAGC 59.738 52.381 0.00 0.00 0.00 3.09
220 221 2.285220 CACGAATCTGGGCACGAATTAG 59.715 50.000 0.00 0.00 0.00 1.73
221 222 2.276201 CACGAATCTGGGCACGAATTA 58.724 47.619 0.00 0.00 0.00 1.40
222 223 1.086696 CACGAATCTGGGCACGAATT 58.913 50.000 0.00 0.00 0.00 2.17
223 224 1.369091 GCACGAATCTGGGCACGAAT 61.369 55.000 0.00 0.00 0.00 3.34
224 225 2.032634 GCACGAATCTGGGCACGAA 61.033 57.895 0.00 0.00 0.00 3.85
225 226 2.434185 GCACGAATCTGGGCACGA 60.434 61.111 0.00 0.00 0.00 4.35
226 227 2.741985 TGCACGAATCTGGGCACG 60.742 61.111 0.00 0.00 0.00 5.34
227 228 0.955428 TTCTGCACGAATCTGGGCAC 60.955 55.000 0.00 0.00 32.06 5.01
228 229 0.674581 CTTCTGCACGAATCTGGGCA 60.675 55.000 2.52 2.52 34.66 5.36
229 230 0.674895 ACTTCTGCACGAATCTGGGC 60.675 55.000 0.00 0.00 0.00 5.36
230 231 1.813513 AACTTCTGCACGAATCTGGG 58.186 50.000 0.00 0.00 0.00 4.45
231 232 3.369147 CAGTAACTTCTGCACGAATCTGG 59.631 47.826 0.00 0.00 0.00 3.86
232 233 3.369147 CCAGTAACTTCTGCACGAATCTG 59.631 47.826 0.00 0.00 34.47 2.90
233 234 3.258372 TCCAGTAACTTCTGCACGAATCT 59.742 43.478 0.00 0.00 34.47 2.40
234 235 3.368236 GTCCAGTAACTTCTGCACGAATC 59.632 47.826 0.00 0.00 34.47 2.52
239 240 2.433868 TCGTCCAGTAACTTCTGCAC 57.566 50.000 0.00 0.00 34.47 4.57
240 241 2.560981 TCATCGTCCAGTAACTTCTGCA 59.439 45.455 0.00 0.00 34.47 4.41
241 242 3.232213 TCATCGTCCAGTAACTTCTGC 57.768 47.619 0.00 0.00 34.47 4.26
243 244 5.419155 TCTTCATCATCGTCCAGTAACTTCT 59.581 40.000 0.00 0.00 0.00 2.85
244 245 5.517054 GTCTTCATCATCGTCCAGTAACTTC 59.483 44.000 0.00 0.00 0.00 3.01
246 247 4.438880 CGTCTTCATCATCGTCCAGTAACT 60.439 45.833 0.00 0.00 0.00 2.24
247 248 3.791887 CGTCTTCATCATCGTCCAGTAAC 59.208 47.826 0.00 0.00 0.00 2.50
248 249 3.442625 ACGTCTTCATCATCGTCCAGTAA 59.557 43.478 0.00 0.00 30.71 2.24
249 250 3.014623 ACGTCTTCATCATCGTCCAGTA 58.985 45.455 0.00 0.00 30.71 2.74
250 251 1.819288 ACGTCTTCATCATCGTCCAGT 59.181 47.619 0.00 0.00 30.71 4.00
251 252 2.188524 CACGTCTTCATCATCGTCCAG 58.811 52.381 0.00 0.00 34.30 3.86
252 253 1.544246 ACACGTCTTCATCATCGTCCA 59.456 47.619 0.00 0.00 34.30 4.02
253 254 1.920574 CACACGTCTTCATCATCGTCC 59.079 52.381 0.00 0.00 34.30 4.79
254 255 1.920574 CCACACGTCTTCATCATCGTC 59.079 52.381 0.00 0.00 34.30 4.20
257 258 2.002586 CACCCACACGTCTTCATCATC 58.997 52.381 0.00 0.00 0.00 2.92
258 259 1.623311 TCACCCACACGTCTTCATCAT 59.377 47.619 0.00 0.00 0.00 2.45
259 260 1.000843 CTCACCCACACGTCTTCATCA 59.999 52.381 0.00 0.00 0.00 3.07
260 261 1.000955 ACTCACCCACACGTCTTCATC 59.999 52.381 0.00 0.00 0.00 2.92
261 262 1.048601 ACTCACCCACACGTCTTCAT 58.951 50.000 0.00 0.00 0.00 2.57
262 263 0.828022 AACTCACCCACACGTCTTCA 59.172 50.000 0.00 0.00 0.00 3.02
264 265 0.179056 CCAACTCACCCACACGTCTT 60.179 55.000 0.00 0.00 0.00 3.01
266 267 2.251642 GCCAACTCACCCACACGTC 61.252 63.158 0.00 0.00 0.00 4.34
267 268 1.404479 TAGCCAACTCACCCACACGT 61.404 55.000 0.00 0.00 0.00 4.49
269 270 1.235724 GTTAGCCAACTCACCCACAC 58.764 55.000 0.00 0.00 0.00 3.82
270 271 0.109723 GGTTAGCCAACTCACCCACA 59.890 55.000 0.00 0.00 34.57 4.17
271 272 2.942641 GGTTAGCCAACTCACCCAC 58.057 57.895 0.00 0.00 34.57 4.61
274 275 0.608308 GTGGGGTTAGCCAACTCACC 60.608 60.000 1.94 0.00 39.16 4.02
275 276 0.109723 TGTGGGGTTAGCCAACTCAC 59.890 55.000 9.56 5.20 36.81 3.51
276 277 0.400213 CTGTGGGGTTAGCCAACTCA 59.600 55.000 9.56 0.00 36.81 3.41
277 278 0.400594 ACTGTGGGGTTAGCCAACTC 59.599 55.000 9.56 0.00 34.88 3.01
279 280 0.179001 ACACTGTGGGGTTAGCCAAC 60.179 55.000 13.09 0.13 36.17 3.77
280 281 0.179004 CACACTGTGGGGTTAGCCAA 60.179 55.000 13.09 0.00 36.17 4.52
281 282 1.454104 CACACTGTGGGGTTAGCCA 59.546 57.895 13.09 0.00 36.17 4.75
282 283 4.397348 CACACTGTGGGGTTAGCC 57.603 61.111 13.09 0.00 0.00 3.93
291 292 1.938861 GTGTAACGCCCACACTGTG 59.061 57.895 6.19 6.19 42.43 3.66
292 293 4.449391 GTGTAACGCCCACACTGT 57.551 55.556 7.34 0.00 42.43 3.55
297 298 3.423996 TTTGAAAAGTGTAACGCCCAC 57.576 42.857 0.00 0.00 45.86 4.61
299 300 7.466193 TTTTTATTTGAAAAGTGTAACGCCC 57.534 32.000 0.00 0.00 45.86 6.13
323 324 5.382303 CGTATCAAGCAGTTCGTGATTTTT 58.618 37.500 0.00 0.00 40.24 1.94
324 325 4.142902 CCGTATCAAGCAGTTCGTGATTTT 60.143 41.667 0.00 0.00 40.24 1.82
325 326 3.370978 CCGTATCAAGCAGTTCGTGATTT 59.629 43.478 0.00 0.00 40.24 2.17
326 327 2.930040 CCGTATCAAGCAGTTCGTGATT 59.070 45.455 0.00 0.00 40.24 2.57
327 328 2.540515 CCGTATCAAGCAGTTCGTGAT 58.459 47.619 0.00 0.00 44.25 3.06
328 329 1.403647 CCCGTATCAAGCAGTTCGTGA 60.404 52.381 0.00 0.00 37.58 4.35
385 2412 3.451178 AGAGATTGCACGGTATGGTAGTT 59.549 43.478 0.00 0.00 0.00 2.24
529 3354 3.269347 CCTAAACATCGGCGGCGG 61.269 66.667 31.73 18.65 0.00 6.13
594 3419 1.632589 GTCCCCTTTGTCTGCCAAAT 58.367 50.000 0.00 0.00 42.02 2.32
605 3430 2.112297 TTTCGCTGCGTCCCCTTT 59.888 55.556 22.48 0.00 0.00 3.11
782 3636 4.865776 ACAACACGTATGGTCCATTTTTG 58.134 39.130 10.33 7.16 0.00 2.44
783 3637 5.523438 AACAACACGTATGGTCCATTTTT 57.477 34.783 10.33 0.00 0.00 1.94
784 3638 5.067936 TGAAACAACACGTATGGTCCATTTT 59.932 36.000 10.33 1.55 0.00 1.82
786 3640 4.138290 TGAAACAACACGTATGGTCCATT 58.862 39.130 10.33 0.00 0.00 3.16
787 3641 3.745799 TGAAACAACACGTATGGTCCAT 58.254 40.909 9.88 9.88 0.00 3.41
788 3642 3.195471 TGAAACAACACGTATGGTCCA 57.805 42.857 0.00 0.00 0.00 4.02
789 3643 4.555348 TTTGAAACAACACGTATGGTCC 57.445 40.909 5.62 0.00 0.00 4.46
815 3672 1.511305 CGCAGACACGTATGGTCCT 59.489 57.895 1.21 0.00 35.89 3.85
1064 3956 5.658634 AGATGATCTAGGAAGCTGTGTGTTA 59.341 40.000 0.00 0.00 0.00 2.41
1960 5051 5.861251 CAGTAAGATTAGCTAGAGATTGCCG 59.139 44.000 0.00 0.00 0.00 5.69
2028 5119 6.810911 TGGCACAATATTGTTAAACACAAGT 58.189 32.000 18.50 0.00 42.40 3.16
2108 5200 8.375506 ACCATTACTAGATTGTTCTGTTGAGAA 58.624 33.333 0.00 0.00 35.75 2.87
2454 5583 5.239359 TGCACTTACATGAATCTCAATGC 57.761 39.130 0.00 0.00 0.00 3.56
2481 5610 6.821388 AGCCGTTAGATGTAGAATTCTCATT 58.179 36.000 12.24 8.73 0.00 2.57
2534 5663 9.537192 TTCAGTTGTAAAAGAACTATTTCTCGA 57.463 29.630 0.00 0.00 41.56 4.04
2560 5689 8.792830 AAGTAGGCGATGCATGTTATATATTT 57.207 30.769 2.46 0.00 0.00 1.40
2569 5698 2.698855 AGAAAGTAGGCGATGCATGT 57.301 45.000 2.46 0.00 0.00 3.21
2574 5703 4.331168 CCTTGAAGAAGAAAGTAGGCGATG 59.669 45.833 0.00 0.00 0.00 3.84
2575 5704 4.508662 CCTTGAAGAAGAAAGTAGGCGAT 58.491 43.478 0.00 0.00 0.00 4.58
2625 5754 3.507233 ACCAAGAATACTACGACCGACAA 59.493 43.478 0.00 0.00 0.00 3.18
2649 5778 0.680921 CCCAAACACCCGCTCATGAT 60.681 55.000 0.00 0.00 0.00 2.45
2650 5779 1.303236 CCCAAACACCCGCTCATGA 60.303 57.895 0.00 0.00 0.00 3.07
2672 5801 4.099419 ACCCAAGAAGGTCACAAAAATGTC 59.901 41.667 0.00 0.00 33.81 3.06
2688 6684 1.134220 GTTGACACACTGGACCCAAGA 60.134 52.381 0.00 0.00 0.00 3.02
2716 6712 1.815003 CGCTGATCGAACCCATGCA 60.815 57.895 0.00 0.00 41.67 3.96
2756 6752 3.767673 AGTACAAGGAGGACGATAAGCAA 59.232 43.478 0.00 0.00 0.00 3.91
2777 6773 3.691820 TGGACCTAGACCACTCCAG 57.308 57.895 4.84 0.00 32.03 3.86
2828 6824 2.291741 GCGATTTTTATGCCTCCTGGAG 59.708 50.000 17.02 17.02 34.57 3.86
2829 6825 2.297701 GCGATTTTTATGCCTCCTGGA 58.702 47.619 0.00 0.00 34.57 3.86
2830 6826 1.338020 GGCGATTTTTATGCCTCCTGG 59.662 52.381 0.00 0.00 45.40 4.45
2831 6827 1.002468 CGGCGATTTTTATGCCTCCTG 60.002 52.381 0.00 0.00 46.67 3.86
2832 6828 1.308998 CGGCGATTTTTATGCCTCCT 58.691 50.000 0.00 0.00 46.67 3.69
2833 6829 0.317854 GCGGCGATTTTTATGCCTCC 60.318 55.000 12.98 0.00 46.67 4.30
2834 6830 0.317854 GGCGGCGATTTTTATGCCTC 60.318 55.000 12.98 0.00 46.67 4.70
2835 6831 1.733526 GGCGGCGATTTTTATGCCT 59.266 52.632 12.98 0.00 46.67 4.75
2836 6832 0.594796 CAGGCGGCGATTTTTATGCC 60.595 55.000 12.98 0.00 45.39 4.40
2837 6833 0.594796 CCAGGCGGCGATTTTTATGC 60.595 55.000 12.98 0.00 0.00 3.14
2838 6834 0.030638 CCCAGGCGGCGATTTTTATG 59.969 55.000 12.98 0.00 0.00 1.90
2839 6835 1.106944 CCCCAGGCGGCGATTTTTAT 61.107 55.000 12.98 0.00 0.00 1.40
2840 6836 1.751162 CCCCAGGCGGCGATTTTTA 60.751 57.895 12.98 0.00 0.00 1.52
2841 6837 3.068064 CCCCAGGCGGCGATTTTT 61.068 61.111 12.98 0.00 0.00 1.94
2852 6848 4.760047 CGTTGACTCGCCCCCAGG 62.760 72.222 0.00 0.00 0.00 4.45
2853 6849 4.760047 CCGTTGACTCGCCCCCAG 62.760 72.222 0.00 0.00 0.00 4.45
2855 6851 1.394266 TATACCGTTGACTCGCCCCC 61.394 60.000 0.00 0.00 0.00 5.40
2856 6852 0.461135 TTATACCGTTGACTCGCCCC 59.539 55.000 0.00 0.00 0.00 5.80
2857 6853 2.035576 AGATTATACCGTTGACTCGCCC 59.964 50.000 0.00 0.00 0.00 6.13
2858 6854 3.050619 CAGATTATACCGTTGACTCGCC 58.949 50.000 0.00 0.00 0.00 5.54
2859 6855 2.471743 GCAGATTATACCGTTGACTCGC 59.528 50.000 0.00 0.00 0.00 5.03
2860 6856 3.966154 AGCAGATTATACCGTTGACTCG 58.034 45.455 0.00 0.00 0.00 4.18
2861 6857 4.979197 CAGAGCAGATTATACCGTTGACTC 59.021 45.833 0.00 0.00 0.00 3.36
2862 6858 4.202161 CCAGAGCAGATTATACCGTTGACT 60.202 45.833 0.00 0.00 0.00 3.41
2863 6859 4.051922 CCAGAGCAGATTATACCGTTGAC 58.948 47.826 0.00 0.00 0.00 3.18
2864 6860 3.069586 CCCAGAGCAGATTATACCGTTGA 59.930 47.826 0.00 0.00 0.00 3.18
2865 6861 3.393800 CCCAGAGCAGATTATACCGTTG 58.606 50.000 0.00 0.00 0.00 4.10
2866 6862 2.368875 CCCCAGAGCAGATTATACCGTT 59.631 50.000 0.00 0.00 0.00 4.44
2867 6863 1.971357 CCCCAGAGCAGATTATACCGT 59.029 52.381 0.00 0.00 0.00 4.83
2868 6864 1.276421 CCCCCAGAGCAGATTATACCG 59.724 57.143 0.00 0.00 0.00 4.02
2869 6865 1.003696 GCCCCCAGAGCAGATTATACC 59.996 57.143 0.00 0.00 0.00 2.73
2870 6866 1.338200 CGCCCCCAGAGCAGATTATAC 60.338 57.143 0.00 0.00 0.00 1.47
2871 6867 0.976641 CGCCCCCAGAGCAGATTATA 59.023 55.000 0.00 0.00 0.00 0.98
2872 6868 1.757306 CGCCCCCAGAGCAGATTAT 59.243 57.895 0.00 0.00 0.00 1.28
2873 6869 2.443394 CCGCCCCCAGAGCAGATTA 61.443 63.158 0.00 0.00 0.00 1.75
2874 6870 3.801997 CCGCCCCCAGAGCAGATT 61.802 66.667 0.00 0.00 0.00 2.40
2910 6906 4.394712 GATATCGGCGCCTGGGGG 62.395 72.222 26.68 8.63 0.00 5.40
2911 6907 4.742201 CGATATCGGCGCCTGGGG 62.742 72.222 26.68 9.07 35.37 4.96
2921 6917 1.335872 GCCAAAAATGGGCCGATATCG 60.336 52.381 18.31 18.31 45.87 2.92
2922 6918 2.438868 GCCAAAAATGGGCCGATATC 57.561 50.000 0.00 0.00 45.87 1.63
2929 6925 2.480641 ACATTTGCGCCAAAAATGGGC 61.481 47.619 26.06 0.00 45.29 5.36
2930 6926 1.197264 CACATTTGCGCCAAAAATGGG 59.803 47.619 26.06 21.70 45.29 4.00
2931 6927 1.399984 GCACATTTGCGCCAAAAATGG 60.400 47.619 26.06 18.67 45.29 3.16
2932 6928 1.953113 GCACATTTGCGCCAAAAATG 58.047 45.000 22.85 22.85 46.06 2.32
2943 6939 4.151417 CGAAAGCGGGCACATTTG 57.849 55.556 0.00 0.00 0.00 2.32
2953 6949 1.059942 GCCATTTTTCACCGAAAGCG 58.940 50.000 0.00 0.00 32.93 4.68
2954 6950 1.428448 GGCCATTTTTCACCGAAAGC 58.572 50.000 0.00 0.00 32.93 3.51
2955 6951 2.078849 GGGCCATTTTTCACCGAAAG 57.921 50.000 4.39 0.00 32.93 2.62
2959 6955 1.384525 TATCGGGCCATTTTTCACCG 58.615 50.000 4.39 0.00 45.52 4.94
2960 6956 2.031157 CGATATCGGGCCATTTTTCACC 60.031 50.000 17.51 0.00 35.37 4.02
2961 6957 3.268013 CGATATCGGGCCATTTTTCAC 57.732 47.619 17.51 0.00 35.37 3.18
2974 6970 2.497092 CCGATTCGCGCCGATATCG 61.497 63.158 18.31 18.31 41.45 2.92
2975 6971 2.789203 GCCGATTCGCGCCGATATC 61.789 63.158 14.90 7.79 39.11 1.63
2976 6972 2.809601 GCCGATTCGCGCCGATAT 60.810 61.111 14.90 0.00 39.11 1.63
2981 6977 4.980805 TATGGGCCGATTCGCGCC 62.981 66.667 22.60 22.60 40.78 6.53
2982 6978 2.240612 GAATATGGGCCGATTCGCGC 62.241 60.000 5.24 0.00 41.78 6.86
2983 6979 1.787847 GAATATGGGCCGATTCGCG 59.212 57.895 5.24 0.00 40.47 5.87
2984 6980 1.787847 CGAATATGGGCCGATTCGC 59.212 57.895 29.04 9.13 45.41 4.70
2986 6982 2.171635 GCCGAATATGGGCCGATTC 58.828 57.895 17.03 17.03 44.97 2.52
2987 6983 4.397348 GCCGAATATGGGCCGATT 57.603 55.556 5.24 0.02 44.97 3.34
2992 6988 0.951558 AATTCACGCCGAATATGGGC 59.048 50.000 7.79 7.79 43.83 5.36
2993 6989 2.480419 GAGAATTCACGCCGAATATGGG 59.520 50.000 8.44 0.00 43.83 4.00
2994 6990 3.130633 TGAGAATTCACGCCGAATATGG 58.869 45.455 8.44 0.00 43.83 2.74
2995 6991 4.033932 TGTTGAGAATTCACGCCGAATATG 59.966 41.667 8.44 0.00 43.83 1.78
2996 6992 4.188462 TGTTGAGAATTCACGCCGAATAT 58.812 39.130 8.44 0.00 43.83 1.28
2997 6993 3.591023 TGTTGAGAATTCACGCCGAATA 58.409 40.909 8.44 0.00 43.83 1.75
2998 6994 2.422597 TGTTGAGAATTCACGCCGAAT 58.577 42.857 8.44 0.00 46.70 3.34
2999 6995 1.872388 TGTTGAGAATTCACGCCGAA 58.128 45.000 8.44 0.00 38.22 4.30
3000 6996 2.093306 ATGTTGAGAATTCACGCCGA 57.907 45.000 8.44 0.00 31.71 5.54
3001 6997 4.335082 TTTATGTTGAGAATTCACGCCG 57.665 40.909 8.44 0.00 31.71 6.46
3002 6998 8.856490 AATTATTTATGTTGAGAATTCACGCC 57.144 30.769 8.44 0.00 31.71 5.68
3032 7028 9.889128 TGATTTTCTGTGATGAACTATGTGATA 57.111 29.630 0.00 0.00 0.00 2.15
3033 7029 8.797350 TGATTTTCTGTGATGAACTATGTGAT 57.203 30.769 0.00 0.00 0.00 3.06
3034 7030 8.620116 TTGATTTTCTGTGATGAACTATGTGA 57.380 30.769 0.00 0.00 0.00 3.58
3100 7096 9.585099 ACGTGTGATGAAATATGCATTTTTATT 57.415 25.926 14.07 5.94 34.44 1.40
3101 7097 9.236691 GACGTGTGATGAAATATGCATTTTTAT 57.763 29.630 14.07 11.52 34.44 1.40
3102 7098 7.427895 CGACGTGTGATGAAATATGCATTTTTA 59.572 33.333 14.07 7.85 34.44 1.52
3103 7099 6.251163 CGACGTGTGATGAAATATGCATTTTT 59.749 34.615 14.00 14.00 34.44 1.94
3104 7100 5.738693 CGACGTGTGATGAAATATGCATTTT 59.261 36.000 3.54 0.00 34.44 1.82
3105 7101 5.064579 TCGACGTGTGATGAAATATGCATTT 59.935 36.000 3.54 0.00 37.06 2.32
3106 7102 4.570369 TCGACGTGTGATGAAATATGCATT 59.430 37.500 3.54 0.00 0.00 3.56
3107 7103 4.119136 TCGACGTGTGATGAAATATGCAT 58.881 39.130 3.79 3.79 0.00 3.96
3108 7104 3.516615 TCGACGTGTGATGAAATATGCA 58.483 40.909 0.00 0.00 0.00 3.96
3109 7105 3.602491 GCTCGACGTGTGATGAAATATGC 60.602 47.826 0.00 0.00 0.00 3.14
3110 7106 3.798878 AGCTCGACGTGTGATGAAATATG 59.201 43.478 0.00 0.00 0.00 1.78
3111 7107 4.046938 AGCTCGACGTGTGATGAAATAT 57.953 40.909 0.00 0.00 0.00 1.28
3112 7108 3.503827 AGCTCGACGTGTGATGAAATA 57.496 42.857 0.00 0.00 0.00 1.40
3113 7109 2.370281 AGCTCGACGTGTGATGAAAT 57.630 45.000 0.00 0.00 0.00 2.17
3114 7110 2.415491 CCTAGCTCGACGTGTGATGAAA 60.415 50.000 0.00 0.00 0.00 2.69
3115 7111 1.132453 CCTAGCTCGACGTGTGATGAA 59.868 52.381 0.00 0.00 0.00 2.57
3116 7112 0.733150 CCTAGCTCGACGTGTGATGA 59.267 55.000 0.00 0.00 0.00 2.92
3117 7113 0.867753 GCCTAGCTCGACGTGTGATG 60.868 60.000 0.00 0.00 0.00 3.07
3118 7114 1.313091 TGCCTAGCTCGACGTGTGAT 61.313 55.000 0.00 0.00 0.00 3.06
3119 7115 1.313091 ATGCCTAGCTCGACGTGTGA 61.313 55.000 0.00 0.00 0.00 3.58
3120 7116 0.867753 GATGCCTAGCTCGACGTGTG 60.868 60.000 0.00 0.00 0.00 3.82
3121 7117 1.433879 GATGCCTAGCTCGACGTGT 59.566 57.895 0.00 0.00 0.00 4.49
3122 7118 1.655654 CGATGCCTAGCTCGACGTG 60.656 63.158 0.00 0.00 37.05 4.49
3123 7119 2.716244 CGATGCCTAGCTCGACGT 59.284 61.111 0.00 0.00 37.05 4.34
3124 7120 2.727647 GCGATGCCTAGCTCGACG 60.728 66.667 10.59 0.00 37.05 5.12
3125 7121 2.355244 GGCGATGCCTAGCTCGAC 60.355 66.667 10.59 5.07 46.69 4.20
3135 7131 2.899339 GAGGCTCAAGGGCGATGC 60.899 66.667 10.25 0.00 45.89 3.91
3136 7132 2.203126 GGAGGCTCAAGGGCGATG 60.203 66.667 17.69 0.00 45.89 3.84
3137 7133 0.764369 TATGGAGGCTCAAGGGCGAT 60.764 55.000 17.69 0.00 45.89 4.58
3138 7134 0.980754 TTATGGAGGCTCAAGGGCGA 60.981 55.000 17.69 0.00 45.89 5.54
3139 7135 0.533755 CTTATGGAGGCTCAAGGGCG 60.534 60.000 17.69 0.00 45.89 6.13
3140 7136 0.548510 ACTTATGGAGGCTCAAGGGC 59.451 55.000 17.69 0.00 41.20 5.19
3141 7137 1.748591 GCACTTATGGAGGCTCAAGGG 60.749 57.143 17.69 13.42 0.00 3.95
3142 7138 1.211457 AGCACTTATGGAGGCTCAAGG 59.789 52.381 17.69 4.18 29.36 3.61
3143 7139 2.559440 GAGCACTTATGGAGGCTCAAG 58.441 52.381 17.69 13.59 42.95 3.02
3144 7140 1.210478 GGAGCACTTATGGAGGCTCAA 59.790 52.381 17.69 5.14 44.12 3.02
3145 7141 0.833287 GGAGCACTTATGGAGGCTCA 59.167 55.000 17.69 2.84 44.12 4.26
3146 7142 0.833287 TGGAGCACTTATGGAGGCTC 59.167 55.000 5.78 5.78 42.82 4.70
3147 7143 0.543749 GTGGAGCACTTATGGAGGCT 59.456 55.000 0.00 0.00 35.46 4.58
3148 7144 3.086733 GTGGAGCACTTATGGAGGC 57.913 57.895 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.