Multiple sequence alignment - TraesCS4D01G243800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G243800 chr4D 100.000 5349 0 0 1 5349 408286990 408292338 0.000000e+00 9878
1 TraesCS4D01G243800 chr4D 90.021 471 47 0 4878 5348 408258850 408259320 1.270000e-170 610
2 TraesCS4D01G243800 chr4D 88.953 172 17 2 667 836 440526751 440526922 1.510000e-50 211
3 TraesCS4D01G243800 chr4D 88.820 161 16 2 678 837 194827656 194827497 4.230000e-46 196
4 TraesCS4D01G243800 chr5D 95.489 4168 132 27 756 4880 523435463 523439617 0.000000e+00 6604
5 TraesCS4D01G243800 chr5D 96.009 1779 62 5 3106 4878 46435287 46437062 0.000000e+00 2883
6 TraesCS4D01G243800 chr5D 88.088 680 75 6 1 676 359302114 359301437 0.000000e+00 802
7 TraesCS4D01G243800 chr5D 86.006 686 76 17 1 676 252712821 252712146 0.000000e+00 717
8 TraesCS4D01G243800 chr5D 91.720 471 35 3 4878 5348 359309612 359309146 0.000000e+00 651
9 TraesCS4D01G243800 chr5D 90.678 472 38 5 4878 5348 272895431 272894965 1.640000e-174 623
10 TraesCS4D01G243800 chr5D 90.254 472 43 3 4878 5348 375487858 375488327 9.850000e-172 614
11 TraesCS4D01G243800 chr5D 89.831 472 47 1 4878 5349 32824241 32823771 5.930000e-169 604
12 TraesCS4D01G243800 chr5D 89.809 471 47 1 4878 5348 101500411 101499942 2.130000e-168 603
13 TraesCS4D01G243800 chr5D 88.321 274 23 8 678 944 46433440 46433711 2.400000e-83 320
14 TraesCS4D01G243800 chr5D 90.780 141 11 2 670 808 342012978 342012838 2.540000e-43 187
15 TraesCS4D01G243800 chr7D 97.163 3772 80 6 865 4610 614263086 614266856 0.000000e+00 6348
16 TraesCS4D01G243800 chr7D 88.210 687 68 10 1 676 280009877 280009193 0.000000e+00 808
17 TraesCS4D01G243800 chr7D 85.294 680 89 9 1 676 393274967 393274295 0.000000e+00 691
18 TraesCS4D01G243800 chr7D 85.212 683 88 12 1 676 349844936 349844260 0.000000e+00 689
19 TraesCS4D01G243800 chr7D 92.357 471 36 0 4878 5348 376772548 376772078 0.000000e+00 671
20 TraesCS4D01G243800 chr7D 88.645 273 24 6 678 944 359086070 359085799 5.170000e-85 326
21 TraesCS4D01G243800 chr5B 94.037 4008 210 14 871 4856 548910368 548906368 0.000000e+00 6050
22 TraesCS4D01G243800 chrUn 96.629 3560 85 11 1346 4880 187022741 187026290 0.000000e+00 5877
23 TraesCS4D01G243800 chrUn 95.411 1874 73 9 2858 4724 34767391 34765524 0.000000e+00 2972
24 TraesCS4D01G243800 chrUn 96.419 363 13 0 982 1344 478666321 478666683 2.760000e-167 599
25 TraesCS4D01G243800 chrUn 94.278 367 19 2 906 1272 34769029 34768665 1.300000e-155 560
26 TraesCS4D01G243800 chr1B 92.230 4041 193 22 865 4877 41000863 41004810 0.000000e+00 5611
27 TraesCS4D01G243800 chr1B 95.728 2458 94 7 2425 4877 644621712 644619261 0.000000e+00 3947
28 TraesCS4D01G243800 chr1B 91.996 912 52 2 1182 2072 644622622 644621711 0.000000e+00 1260
29 TraesCS4D01G243800 chr1B 86.364 682 78 11 2434 3109 8180863 8181535 0.000000e+00 730
30 TraesCS4D01G243800 chr6D 96.232 1778 53 6 3106 4877 31242855 31244624 0.000000e+00 2900
31 TraesCS4D01G243800 chr6D 85.463 681 91 8 1 676 242342319 242342996 0.000000e+00 702
32 TraesCS4D01G243800 chr6D 88.768 276 20 10 678 945 27255863 27255591 1.440000e-85 327
33 TraesCS4D01G243800 chr6D 88.686 274 22 8 678 944 56155715 56155444 5.170000e-85 326
34 TraesCS4D01G243800 chr6D 89.349 169 16 2 669 835 449528016 449528184 1.510000e-50 211
35 TraesCS4D01G243800 chr3D 96.113 1775 66 3 3106 4877 25768381 25766607 0.000000e+00 2892
36 TraesCS4D01G243800 chr3D 86.070 682 83 10 1 676 437137405 437138080 0.000000e+00 723
37 TraesCS4D01G243800 chr3D 89.375 480 49 2 4871 5348 171359208 171359687 2.130000e-168 603
38 TraesCS4D01G243800 chr2A 94.145 1691 68 12 871 2540 57439871 57438191 0.000000e+00 2545
39 TraesCS4D01G243800 chr2A 93.432 1690 81 9 871 2540 64990891 64992570 0.000000e+00 2479
40 TraesCS4D01G243800 chr2A 87.425 167 19 2 669 834 560563709 560563874 1.970000e-44 191
41 TraesCS4D01G243800 chr5A 92.422 1689 85 13 873 2540 399586599 399588265 0.000000e+00 2370
42 TraesCS4D01G243800 chr5A 82.895 532 49 22 1103 1613 706538084 706538594 1.770000e-119 440
43 TraesCS4D01G243800 chr5A 88.166 169 18 2 669 836 226389055 226389222 3.270000e-47 200
44 TraesCS4D01G243800 chr6A 93.528 927 37 6 1635 2540 615647879 615646955 0.000000e+00 1358
45 TraesCS4D01G243800 chr1D 83.996 1081 129 26 2043 3109 5451676 5452726 0.000000e+00 998
46 TraesCS4D01G243800 chr1D 85.505 683 86 11 1 676 199007130 199006454 0.000000e+00 701
47 TraesCS4D01G243800 chr1D 89.831 472 45 3 4878 5348 335175885 335176354 2.130000e-168 603
48 TraesCS4D01G243800 chr1D 89.513 267 18 9 678 936 459437699 459437435 3.990000e-86 329
49 TraesCS4D01G243800 chr1D 88.043 276 22 10 678 945 405137279 405137007 3.110000e-82 316
50 TraesCS4D01G243800 chr1D 88.235 170 18 2 669 837 233159526 233159694 9.080000e-48 202
51 TraesCS4D01G243800 chr1A 86.072 718 72 18 2405 3109 6767247 6766545 0.000000e+00 747
52 TraesCS4D01G243800 chr1A 86.232 138 10 3 2978 3109 6765576 6765442 2.010000e-29 141
53 TraesCS4D01G243800 chr7B 93.291 477 31 1 865 1341 688473239 688473714 0.000000e+00 702
54 TraesCS4D01G243800 chr7B 90.169 295 25 4 756 1049 745368840 745369131 1.090000e-101 381
55 TraesCS4D01G243800 chr4A 84.773 683 92 11 1 676 227390651 227389974 0.000000e+00 675
56 TraesCS4D01G243800 chr3A 94.014 284 14 3 768 1049 737575226 737574944 1.380000e-115 427
57 TraesCS4D01G243800 chr7A 86.782 174 17 5 667 835 86461722 86461894 7.070000e-44 189
58 TraesCS4D01G243800 chr7A 85.119 168 23 2 670 836 13603133 13602967 2.560000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G243800 chr4D 408286990 408292338 5348 False 9878.0 9878 100.0000 1 5349 1 chr4D.!!$F2 5348
1 TraesCS4D01G243800 chr5D 523435463 523439617 4154 False 6604.0 6604 95.4890 756 4880 1 chr5D.!!$F2 4124
2 TraesCS4D01G243800 chr5D 46433440 46437062 3622 False 1601.5 2883 92.1650 678 4878 2 chr5D.!!$F3 4200
3 TraesCS4D01G243800 chr5D 359301437 359302114 677 True 802.0 802 88.0880 1 676 1 chr5D.!!$R6 675
4 TraesCS4D01G243800 chr5D 252712146 252712821 675 True 717.0 717 86.0060 1 676 1 chr5D.!!$R3 675
5 TraesCS4D01G243800 chr7D 614263086 614266856 3770 False 6348.0 6348 97.1630 865 4610 1 chr7D.!!$F1 3745
6 TraesCS4D01G243800 chr7D 280009193 280009877 684 True 808.0 808 88.2100 1 676 1 chr7D.!!$R1 675
7 TraesCS4D01G243800 chr7D 393274295 393274967 672 True 691.0 691 85.2940 1 676 1 chr7D.!!$R5 675
8 TraesCS4D01G243800 chr7D 349844260 349844936 676 True 689.0 689 85.2120 1 676 1 chr7D.!!$R2 675
9 TraesCS4D01G243800 chr5B 548906368 548910368 4000 True 6050.0 6050 94.0370 871 4856 1 chr5B.!!$R1 3985
10 TraesCS4D01G243800 chrUn 187022741 187026290 3549 False 5877.0 5877 96.6290 1346 4880 1 chrUn.!!$F1 3534
11 TraesCS4D01G243800 chrUn 34765524 34769029 3505 True 1766.0 2972 94.8445 906 4724 2 chrUn.!!$R1 3818
12 TraesCS4D01G243800 chr1B 41000863 41004810 3947 False 5611.0 5611 92.2300 865 4877 1 chr1B.!!$F2 4012
13 TraesCS4D01G243800 chr1B 644619261 644622622 3361 True 2603.5 3947 93.8620 1182 4877 2 chr1B.!!$R1 3695
14 TraesCS4D01G243800 chr1B 8180863 8181535 672 False 730.0 730 86.3640 2434 3109 1 chr1B.!!$F1 675
15 TraesCS4D01G243800 chr6D 31242855 31244624 1769 False 2900.0 2900 96.2320 3106 4877 1 chr6D.!!$F1 1771
16 TraesCS4D01G243800 chr6D 242342319 242342996 677 False 702.0 702 85.4630 1 676 1 chr6D.!!$F2 675
17 TraesCS4D01G243800 chr3D 25766607 25768381 1774 True 2892.0 2892 96.1130 3106 4877 1 chr3D.!!$R1 1771
18 TraesCS4D01G243800 chr3D 437137405 437138080 675 False 723.0 723 86.0700 1 676 1 chr3D.!!$F2 675
19 TraesCS4D01G243800 chr2A 57438191 57439871 1680 True 2545.0 2545 94.1450 871 2540 1 chr2A.!!$R1 1669
20 TraesCS4D01G243800 chr2A 64990891 64992570 1679 False 2479.0 2479 93.4320 871 2540 1 chr2A.!!$F1 1669
21 TraesCS4D01G243800 chr5A 399586599 399588265 1666 False 2370.0 2370 92.4220 873 2540 1 chr5A.!!$F2 1667
22 TraesCS4D01G243800 chr5A 706538084 706538594 510 False 440.0 440 82.8950 1103 1613 1 chr5A.!!$F3 510
23 TraesCS4D01G243800 chr6A 615646955 615647879 924 True 1358.0 1358 93.5280 1635 2540 1 chr6A.!!$R1 905
24 TraesCS4D01G243800 chr1D 5451676 5452726 1050 False 998.0 998 83.9960 2043 3109 1 chr1D.!!$F1 1066
25 TraesCS4D01G243800 chr1D 199006454 199007130 676 True 701.0 701 85.5050 1 676 1 chr1D.!!$R1 675
26 TraesCS4D01G243800 chr1A 6765442 6767247 1805 True 444.0 747 86.1520 2405 3109 2 chr1A.!!$R1 704
27 TraesCS4D01G243800 chr4A 227389974 227390651 677 True 675.0 675 84.7730 1 676 1 chr4A.!!$R1 675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
638 675 0.037160 TGTTTAGGCGGGAAGGGTTC 59.963 55.000 0.00 0.00 0.00 3.62 F
650 687 0.336737 AAGGGTTCCCACAACAACCA 59.663 50.000 10.73 0.00 43.54 3.67 F
651 688 0.336737 AGGGTTCCCACAACAACCAA 59.663 50.000 10.73 0.00 43.54 3.67 F
652 689 1.062505 AGGGTTCCCACAACAACCAAT 60.063 47.619 10.73 0.00 43.54 3.16 F
814 852 1.074072 AAATGGCGCACCTGGTGTA 59.926 52.632 26.48 12.18 35.75 2.90 F
1127 1212 1.152839 GCCTACTCCTCTCCTCGCT 60.153 63.158 0.00 0.00 0.00 4.93 F
2725 3793 1.292242 TCAGATGGGGAAGCTACTCCT 59.708 52.381 4.45 0.00 35.63 3.69 F
3002 4549 1.351350 TCTCTCGAGTTGTCAGAGGGA 59.649 52.381 13.13 0.00 39.01 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1474 2120 3.044894 GTTGAGGAGGAGGATGAAGGAT 58.955 50.000 0.00 0.00 0.00 3.24 R
1901 2951 4.024387 GTCTACGGAACTTGTTGCAATTGA 60.024 41.667 10.34 0.00 0.00 2.57 R
1916 2966 6.323996 AGGATCATCAATTAACTGTCTACGGA 59.676 38.462 0.00 0.00 0.00 4.69 R
2489 3552 6.909909 AGATCCATTCAAACTAAAACCGTTC 58.090 36.000 0.00 0.00 0.00 3.95 R
2725 3793 5.871324 AGAAGGAAAAATAGGGGTTACCA 57.129 39.130 2.98 0.00 43.89 3.25 R
3075 5794 0.723414 CGACGACGACTAGGTTGCTA 59.277 55.000 0.00 0.00 42.66 3.49 R
3888 6630 1.592669 CAGATGGCCGGCGACTTAG 60.593 63.158 22.54 4.55 0.00 2.18 R
4962 7779 0.035458 GACCAAGACCACCAGGACAG 59.965 60.000 0.00 0.00 38.69 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
312 320 0.682855 CTCTCTTCCCCTCGCTCACT 60.683 60.000 0.00 0.00 0.00 3.41
400 412 2.332654 GGGCCACCGATGTTGTGTC 61.333 63.158 4.39 0.00 31.71 3.67
403 415 0.168788 GCCACCGATGTTGTGTCATG 59.831 55.000 0.00 0.00 31.71 3.07
425 437 0.320771 CTACTCCAGTGTGGTGTGGC 60.321 60.000 10.27 0.00 43.35 5.01
500 512 1.620819 GGAGAGGTGTTCTTGAGCTCA 59.379 52.381 13.74 13.74 39.87 4.26
521 533 0.546122 TGAGCTTGTGTGGTTGAGGT 59.454 50.000 0.00 0.00 0.00 3.85
527 555 2.270352 TGTGTGGTTGAGGTTGATCC 57.730 50.000 0.00 0.00 0.00 3.36
547 576 2.289320 CCGAATGATCTGTCCCTGATCC 60.289 54.545 8.15 0.00 37.81 3.36
560 589 1.571919 CTGATCCGTTCCGTTGATCC 58.428 55.000 0.00 0.00 35.18 3.36
563 600 0.178068 ATCCGTTCCGTTGATCCCTG 59.822 55.000 0.00 0.00 0.00 4.45
602 639 5.222568 TGGCTAGTCCTATTTATAGAGGCCT 60.223 44.000 3.86 3.86 32.57 5.19
606 643 5.477913 AGTCCTATTTATAGAGGCCTTGGT 58.522 41.667 6.77 0.00 32.57 3.67
607 644 5.544562 AGTCCTATTTATAGAGGCCTTGGTC 59.455 44.000 6.77 0.00 32.57 4.02
608 645 4.844655 TCCTATTTATAGAGGCCTTGGTCC 59.155 45.833 6.77 0.00 32.57 4.46
609 646 4.846940 CCTATTTATAGAGGCCTTGGTCCT 59.153 45.833 6.77 0.29 36.46 3.85
614 651 1.604915 GAGGCCTTGGTCCTCTTCC 59.395 63.158 6.77 0.00 45.13 3.46
615 652 1.916206 GAGGCCTTGGTCCTCTTCCC 61.916 65.000 6.77 0.00 45.13 3.97
616 653 2.231380 GGCCTTGGTCCTCTTCCCA 61.231 63.158 0.00 0.00 0.00 4.37
617 654 1.767692 GCCTTGGTCCTCTTCCCAA 59.232 57.895 0.00 0.00 38.38 4.12
618 655 0.112412 GCCTTGGTCCTCTTCCCAAA 59.888 55.000 0.00 0.00 40.09 3.28
619 656 1.272704 GCCTTGGTCCTCTTCCCAAAT 60.273 52.381 0.00 0.00 40.09 2.32
620 657 2.450476 CCTTGGTCCTCTTCCCAAATG 58.550 52.381 0.00 0.00 40.09 2.32
621 658 2.225117 CCTTGGTCCTCTTCCCAAATGT 60.225 50.000 0.00 0.00 40.09 2.71
622 659 3.500343 CTTGGTCCTCTTCCCAAATGTT 58.500 45.455 0.00 0.00 40.09 2.71
623 660 3.611025 TGGTCCTCTTCCCAAATGTTT 57.389 42.857 0.00 0.00 0.00 2.83
624 661 4.733077 TGGTCCTCTTCCCAAATGTTTA 57.267 40.909 0.00 0.00 0.00 2.01
625 662 4.662278 TGGTCCTCTTCCCAAATGTTTAG 58.338 43.478 0.00 0.00 0.00 1.85
626 663 4.017126 GGTCCTCTTCCCAAATGTTTAGG 58.983 47.826 0.00 0.00 0.00 2.69
627 664 3.444034 GTCCTCTTCCCAAATGTTTAGGC 59.556 47.826 0.00 0.00 0.00 3.93
628 665 2.423538 CCTCTTCCCAAATGTTTAGGCG 59.576 50.000 0.00 0.00 0.00 5.52
629 666 2.423538 CTCTTCCCAAATGTTTAGGCGG 59.576 50.000 0.00 0.00 0.00 6.13
630 667 1.476488 CTTCCCAAATGTTTAGGCGGG 59.524 52.381 0.00 0.00 34.81 6.13
631 668 0.699399 TCCCAAATGTTTAGGCGGGA 59.301 50.000 0.00 0.00 40.42 5.14
632 669 1.075698 TCCCAAATGTTTAGGCGGGAA 59.924 47.619 0.00 0.00 39.75 3.97
633 670 1.476488 CCCAAATGTTTAGGCGGGAAG 59.524 52.381 0.00 0.00 35.57 3.46
634 671 1.476488 CCAAATGTTTAGGCGGGAAGG 59.524 52.381 0.00 0.00 0.00 3.46
635 672 1.476488 CAAATGTTTAGGCGGGAAGGG 59.524 52.381 0.00 0.00 0.00 3.95
636 673 0.702316 AATGTTTAGGCGGGAAGGGT 59.298 50.000 0.00 0.00 0.00 4.34
637 674 0.702316 ATGTTTAGGCGGGAAGGGTT 59.298 50.000 0.00 0.00 0.00 4.11
638 675 0.037160 TGTTTAGGCGGGAAGGGTTC 59.963 55.000 0.00 0.00 0.00 3.62
647 684 3.524346 GGAAGGGTTCCCACAACAA 57.476 52.632 10.73 0.00 44.30 2.83
648 685 1.037493 GGAAGGGTTCCCACAACAAC 58.963 55.000 10.73 0.00 44.30 3.32
649 686 1.037493 GAAGGGTTCCCACAACAACC 58.963 55.000 10.73 0.00 41.35 3.77
650 687 0.336737 AAGGGTTCCCACAACAACCA 59.663 50.000 10.73 0.00 43.54 3.67
651 688 0.336737 AGGGTTCCCACAACAACCAA 59.663 50.000 10.73 0.00 43.54 3.67
652 689 1.062505 AGGGTTCCCACAACAACCAAT 60.063 47.619 10.73 0.00 43.54 3.16
653 690 1.765904 GGGTTCCCACAACAACCAATT 59.234 47.619 2.59 0.00 43.54 2.32
654 691 2.171659 GGGTTCCCACAACAACCAATTT 59.828 45.455 2.59 0.00 43.54 1.82
655 692 3.202097 GGTTCCCACAACAACCAATTTG 58.798 45.455 0.00 0.00 41.65 2.32
656 693 3.118592 GGTTCCCACAACAACCAATTTGA 60.119 43.478 0.00 0.00 41.65 2.69
657 694 4.508662 GTTCCCACAACAACCAATTTGAA 58.491 39.130 0.00 0.00 38.73 2.69
658 695 4.399004 TCCCACAACAACCAATTTGAAG 57.601 40.909 0.00 0.00 38.73 3.02
659 696 3.133721 TCCCACAACAACCAATTTGAAGG 59.866 43.478 0.00 0.00 38.73 3.46
660 697 3.465871 CCACAACAACCAATTTGAAGGG 58.534 45.455 0.00 0.00 38.73 3.95
661 698 3.465871 CACAACAACCAATTTGAAGGGG 58.534 45.455 0.00 0.00 38.73 4.79
662 699 2.437651 ACAACAACCAATTTGAAGGGGG 59.562 45.455 0.00 0.00 38.73 5.40
663 700 2.703007 CAACAACCAATTTGAAGGGGGA 59.297 45.455 0.00 0.00 38.73 4.81
664 701 2.325484 ACAACCAATTTGAAGGGGGAC 58.675 47.619 0.00 0.00 38.73 4.46
665 702 2.324541 CAACCAATTTGAAGGGGGACA 58.675 47.619 0.00 0.00 37.39 4.02
666 703 2.703007 CAACCAATTTGAAGGGGGACAA 59.297 45.455 0.00 0.00 37.39 3.18
667 704 2.325484 ACCAATTTGAAGGGGGACAAC 58.675 47.619 0.00 0.00 0.00 3.32
668 705 2.090775 ACCAATTTGAAGGGGGACAACT 60.091 45.455 0.00 0.00 0.00 3.16
669 706 3.141272 ACCAATTTGAAGGGGGACAACTA 59.859 43.478 0.00 0.00 0.00 2.24
670 707 3.763897 CCAATTTGAAGGGGGACAACTAG 59.236 47.826 0.00 0.00 0.00 2.57
671 708 4.407365 CAATTTGAAGGGGGACAACTAGT 58.593 43.478 0.00 0.00 0.00 2.57
672 709 5.515886 CCAATTTGAAGGGGGACAACTAGTA 60.516 44.000 0.00 0.00 0.00 1.82
673 710 4.628963 TTTGAAGGGGGACAACTAGTAC 57.371 45.455 0.00 0.00 0.00 2.73
674 711 3.263369 TGAAGGGGGACAACTAGTACA 57.737 47.619 0.00 0.00 30.17 2.90
675 712 3.589641 TGAAGGGGGACAACTAGTACAA 58.410 45.455 0.00 0.00 30.17 2.41
676 713 3.975312 TGAAGGGGGACAACTAGTACAAA 59.025 43.478 0.00 0.00 30.17 2.83
677 714 4.202388 TGAAGGGGGACAACTAGTACAAAC 60.202 45.833 0.00 0.00 30.17 2.93
678 715 3.320129 AGGGGGACAACTAGTACAAACA 58.680 45.455 0.00 0.00 30.17 2.83
679 716 3.072038 AGGGGGACAACTAGTACAAACAC 59.928 47.826 0.00 0.00 30.17 3.32
680 717 3.072038 GGGGGACAACTAGTACAAACACT 59.928 47.826 0.00 0.00 30.17 3.55
681 718 4.284234 GGGGGACAACTAGTACAAACACTA 59.716 45.833 0.00 0.00 30.17 2.74
682 719 5.233225 GGGGACAACTAGTACAAACACTAC 58.767 45.833 0.00 0.00 30.17 2.73
683 720 5.011431 GGGGACAACTAGTACAAACACTACT 59.989 44.000 0.00 0.00 30.17 2.57
684 721 6.209391 GGGGACAACTAGTACAAACACTACTA 59.791 42.308 0.00 0.00 30.17 1.82
814 852 1.074072 AAATGGCGCACCTGGTGTA 59.926 52.632 26.48 12.18 35.75 2.90
823 861 2.268920 CCTGGTGTATGGTGCGCT 59.731 61.111 9.73 0.00 0.00 5.92
855 893 3.996621 CCTGGCCCCACACCCATT 61.997 66.667 0.00 0.00 0.00 3.16
867 951 1.282157 ACACCCATTCCCAGACTTAGC 59.718 52.381 0.00 0.00 0.00 3.09
869 953 1.561542 ACCCATTCCCAGACTTAGCAG 59.438 52.381 0.00 0.00 0.00 4.24
984 1068 1.677966 TCACGTTCTCTCCCCTCCG 60.678 63.158 0.00 0.00 0.00 4.63
1127 1212 1.152839 GCCTACTCCTCTCCTCGCT 60.153 63.158 0.00 0.00 0.00 4.93
1474 2120 4.631740 TCCAGGCACTCCGTCCCA 62.632 66.667 0.00 0.00 34.60 4.37
1916 2966 7.326789 CGTCTTATGATTCAATTGCAACAAGTT 59.673 33.333 0.00 0.00 0.00 2.66
2278 3337 5.395486 GCGTTGTGTGTCTTTGAAATACTTC 59.605 40.000 0.00 0.00 0.00 3.01
2489 3552 3.611517 CAACAGCAGTCTTCTTGTTTCG 58.388 45.455 0.00 0.00 0.00 3.46
2725 3793 1.292242 TCAGATGGGGAAGCTACTCCT 59.708 52.381 4.45 0.00 35.63 3.69
3002 4549 1.351350 TCTCTCGAGTTGTCAGAGGGA 59.649 52.381 13.13 0.00 39.01 4.20
3075 5794 2.034124 ACATTTTTGTCCTGCAGCAGT 58.966 42.857 21.26 0.00 0.00 4.40
3178 5907 2.479566 ATCAATGGTTCAGTCAGCGT 57.520 45.000 0.00 0.00 0.00 5.07
3267 5996 2.034066 TTAGTGCTGCTGCCCCAC 59.966 61.111 13.47 10.60 38.71 4.61
3274 6003 3.832237 CTGCTGCCCCACGAACACT 62.832 63.158 0.00 0.00 0.00 3.55
3276 6005 2.193536 GCTGCCCCACGAACACTTT 61.194 57.895 0.00 0.00 0.00 2.66
3452 6185 3.189080 TCTTTCGCATGGATCAACTGTTG 59.811 43.478 14.24 14.24 0.00 3.33
3594 6328 8.721478 CATGCAAGTACTACTTTTACATTGTCT 58.279 33.333 0.00 0.00 36.03 3.41
3801 6543 2.146342 CTGCAGGACAACGAGTTCATT 58.854 47.619 5.57 0.00 0.00 2.57
3806 6548 1.529438 GGACAACGAGTTCATTTGCGA 59.471 47.619 0.00 0.00 0.00 5.10
3835 6577 4.357947 GTGAGCAGTCCGTCCGCA 62.358 66.667 0.00 0.00 0.00 5.69
3888 6630 2.732597 CGAGATCCTCAACGTCTGGAAC 60.733 54.545 7.96 6.06 33.20 3.62
3914 6656 1.002134 CCGGCCATCTGTTTCCTGT 60.002 57.895 2.24 0.00 0.00 4.00
3953 6695 4.297510 CTCAATGTGATCGGATCTGACTC 58.702 47.826 18.16 6.70 0.00 3.36
3954 6696 3.701040 TCAATGTGATCGGATCTGACTCA 59.299 43.478 18.16 9.16 0.00 3.41
4026 6776 0.601558 TCCAGTTGTGCGACTACCTC 59.398 55.000 0.00 0.00 0.00 3.85
4063 6813 5.355596 CGATGAGAATTCTTCAAGCCTACT 58.644 41.667 9.87 0.00 0.00 2.57
4093 6843 6.401394 CCACTTGAACAGATGTCTATCTCAA 58.599 40.000 0.00 0.00 41.71 3.02
4708 7525 1.078143 CAGTGGAGCACCTAAGGGC 60.078 63.158 0.71 0.00 34.49 5.19
4764 7581 1.031235 TGGATTACCAATGGCGCATG 58.969 50.000 10.83 4.75 43.91 4.06
4803 7620 5.636543 ACTAACAATTACTAGTGGCGTGTTC 59.363 40.000 5.39 0.00 0.00 3.18
4849 7666 5.011533 ACCATTAATAGCAAAAACTGGTGCA 59.988 36.000 0.00 0.00 43.42 4.57
4888 7705 7.956328 TTTTCTAGTAGTGAAGCTATCCTGA 57.044 36.000 0.00 0.00 31.50 3.86
4889 7706 6.945938 TTCTAGTAGTGAAGCTATCCTGAC 57.054 41.667 0.00 0.00 31.50 3.51
4890 7707 6.002653 TCTAGTAGTGAAGCTATCCTGACA 57.997 41.667 0.00 0.00 31.50 3.58
4891 7708 6.424032 TCTAGTAGTGAAGCTATCCTGACAA 58.576 40.000 0.00 0.00 31.50 3.18
4892 7709 6.890268 TCTAGTAGTGAAGCTATCCTGACAAA 59.110 38.462 0.00 0.00 31.50 2.83
4893 7710 6.360370 AGTAGTGAAGCTATCCTGACAAAA 57.640 37.500 0.00 0.00 31.50 2.44
4894 7711 6.402222 AGTAGTGAAGCTATCCTGACAAAAG 58.598 40.000 0.00 0.00 31.50 2.27
4895 7712 4.583871 AGTGAAGCTATCCTGACAAAAGG 58.416 43.478 0.00 0.00 38.84 3.11
4896 7713 4.042187 AGTGAAGCTATCCTGACAAAAGGT 59.958 41.667 0.00 0.00 38.58 3.50
4897 7714 4.154918 GTGAAGCTATCCTGACAAAAGGTG 59.845 45.833 0.00 0.00 38.58 4.00
4898 7715 3.356529 AGCTATCCTGACAAAAGGTGG 57.643 47.619 0.00 0.00 38.58 4.61
4899 7716 2.644798 AGCTATCCTGACAAAAGGTGGT 59.355 45.455 0.00 0.00 38.58 4.16
4900 7717 3.010420 GCTATCCTGACAAAAGGTGGTC 58.990 50.000 0.00 0.00 38.58 4.02
4901 7718 2.185004 ATCCTGACAAAAGGTGGTCG 57.815 50.000 0.00 0.00 38.58 4.79
4902 7719 0.834612 TCCTGACAAAAGGTGGTCGT 59.165 50.000 0.00 0.00 38.58 4.34
4903 7720 1.202604 TCCTGACAAAAGGTGGTCGTC 60.203 52.381 0.00 0.00 38.58 4.20
4904 7721 0.859232 CTGACAAAAGGTGGTCGTCG 59.141 55.000 0.00 0.00 36.83 5.12
4905 7722 1.155424 TGACAAAAGGTGGTCGTCGC 61.155 55.000 0.00 0.00 36.83 5.19
4906 7723 1.838568 GACAAAAGGTGGTCGTCGCC 61.839 60.000 3.55 3.55 46.19 5.54
4912 7729 4.980805 GTGGTCGTCGCCTGCCAA 62.981 66.667 7.14 0.00 32.26 4.52
4913 7730 4.243008 TGGTCGTCGCCTGCCAAA 62.243 61.111 7.14 0.00 0.00 3.28
4914 7731 3.423154 GGTCGTCGCCTGCCAAAG 61.423 66.667 0.00 0.00 0.00 2.77
4926 7743 2.668632 CCAAAGGCTCTGGCGGTA 59.331 61.111 0.00 0.00 39.81 4.02
4927 7744 1.002624 CCAAAGGCTCTGGCGGTAA 60.003 57.895 0.00 0.00 39.81 2.85
4928 7745 0.394352 CCAAAGGCTCTGGCGGTAAT 60.394 55.000 0.00 0.00 39.81 1.89
4929 7746 0.734889 CAAAGGCTCTGGCGGTAATG 59.265 55.000 0.00 0.00 39.81 1.90
4930 7747 1.032114 AAAGGCTCTGGCGGTAATGC 61.032 55.000 0.00 0.00 39.81 3.56
4952 7769 4.699522 GTGGGCTCCGTGGTGACC 62.700 72.222 5.88 5.88 37.31 4.02
4953 7770 4.954118 TGGGCTCCGTGGTGACCT 62.954 66.667 13.72 0.00 37.65 3.85
4954 7771 4.083862 GGGCTCCGTGGTGACCTC 62.084 72.222 2.11 0.00 34.19 3.85
4955 7772 4.083862 GGCTCCGTGGTGACCTCC 62.084 72.222 2.11 0.00 0.00 4.30
4956 7773 4.436998 GCTCCGTGGTGACCTCCG 62.437 72.222 2.11 5.19 0.00 4.63
4957 7774 2.989824 CTCCGTGGTGACCTCCGT 60.990 66.667 2.11 0.00 0.00 4.69
4958 7775 2.987547 TCCGTGGTGACCTCCGTC 60.988 66.667 2.11 0.00 39.66 4.79
4959 7776 2.989824 CCGTGGTGACCTCCGTCT 60.990 66.667 2.11 0.00 39.94 4.18
4960 7777 2.571216 CCGTGGTGACCTCCGTCTT 61.571 63.158 2.11 0.00 39.94 3.01
4961 7778 1.372997 CGTGGTGACCTCCGTCTTG 60.373 63.158 2.11 0.00 39.94 3.02
4962 7779 1.668151 GTGGTGACCTCCGTCTTGC 60.668 63.158 2.11 0.00 39.94 4.01
4963 7780 1.837051 TGGTGACCTCCGTCTTGCT 60.837 57.895 2.11 0.00 39.94 3.91
4964 7781 1.374758 GGTGACCTCCGTCTTGCTG 60.375 63.158 0.00 0.00 39.94 4.41
4965 7782 1.367840 GTGACCTCCGTCTTGCTGT 59.632 57.895 0.00 0.00 39.94 4.40
4966 7783 0.667792 GTGACCTCCGTCTTGCTGTC 60.668 60.000 0.00 0.00 39.94 3.51
4967 7784 1.079750 GACCTCCGTCTTGCTGTCC 60.080 63.158 0.00 0.00 35.99 4.02
4968 7785 1.534235 ACCTCCGTCTTGCTGTCCT 60.534 57.895 0.00 0.00 0.00 3.85
4969 7786 1.079543 CCTCCGTCTTGCTGTCCTG 60.080 63.158 0.00 0.00 0.00 3.86
4970 7787 1.079543 CTCCGTCTTGCTGTCCTGG 60.080 63.158 0.00 0.00 0.00 4.45
4971 7788 1.821061 CTCCGTCTTGCTGTCCTGGT 61.821 60.000 0.00 0.00 0.00 4.00
4972 7789 1.669115 CCGTCTTGCTGTCCTGGTG 60.669 63.158 0.00 0.00 0.00 4.17
4973 7790 1.669115 CGTCTTGCTGTCCTGGTGG 60.669 63.158 0.00 0.00 0.00 4.61
4974 7791 1.451936 GTCTTGCTGTCCTGGTGGT 59.548 57.895 0.00 0.00 34.23 4.16
4975 7792 0.603975 GTCTTGCTGTCCTGGTGGTC 60.604 60.000 0.00 0.00 34.23 4.02
4976 7793 0.764369 TCTTGCTGTCCTGGTGGTCT 60.764 55.000 0.00 0.00 34.23 3.85
4977 7794 0.109342 CTTGCTGTCCTGGTGGTCTT 59.891 55.000 0.00 0.00 34.23 3.01
4978 7795 0.179020 TTGCTGTCCTGGTGGTCTTG 60.179 55.000 0.00 0.00 34.23 3.02
4979 7796 1.302832 GCTGTCCTGGTGGTCTTGG 60.303 63.158 0.00 0.00 34.23 3.61
4980 7797 2.056906 GCTGTCCTGGTGGTCTTGGT 62.057 60.000 0.00 0.00 34.23 3.67
4981 7798 0.035458 CTGTCCTGGTGGTCTTGGTC 59.965 60.000 0.00 0.00 34.23 4.02
4982 7799 0.399949 TGTCCTGGTGGTCTTGGTCT 60.400 55.000 0.00 0.00 34.23 3.85
4983 7800 0.765510 GTCCTGGTGGTCTTGGTCTT 59.234 55.000 0.00 0.00 34.23 3.01
4984 7801 0.764890 TCCTGGTGGTCTTGGTCTTG 59.235 55.000 0.00 0.00 34.23 3.02
4985 7802 0.250901 CCTGGTGGTCTTGGTCTTGG 60.251 60.000 0.00 0.00 0.00 3.61
4986 7803 0.474184 CTGGTGGTCTTGGTCTTGGT 59.526 55.000 0.00 0.00 0.00 3.67
4987 7804 0.182537 TGGTGGTCTTGGTCTTGGTG 59.817 55.000 0.00 0.00 0.00 4.17
4988 7805 1.172812 GGTGGTCTTGGTCTTGGTGC 61.173 60.000 0.00 0.00 0.00 5.01
4989 7806 0.465460 GTGGTCTTGGTCTTGGTGCA 60.465 55.000 0.00 0.00 0.00 4.57
4990 7807 0.465460 TGGTCTTGGTCTTGGTGCAC 60.465 55.000 8.80 8.80 0.00 4.57
4991 7808 0.179018 GGTCTTGGTCTTGGTGCACT 60.179 55.000 17.98 0.00 0.00 4.40
4992 7809 0.947244 GTCTTGGTCTTGGTGCACTG 59.053 55.000 17.98 7.70 0.00 3.66
4993 7810 0.836606 TCTTGGTCTTGGTGCACTGA 59.163 50.000 17.98 10.00 0.00 3.41
4994 7811 1.421268 TCTTGGTCTTGGTGCACTGAT 59.579 47.619 17.98 0.00 0.00 2.90
4995 7812 2.637382 TCTTGGTCTTGGTGCACTGATA 59.363 45.455 17.98 0.00 0.00 2.15
4996 7813 3.264193 TCTTGGTCTTGGTGCACTGATAT 59.736 43.478 17.98 0.00 0.00 1.63
4997 7814 2.989909 TGGTCTTGGTGCACTGATATG 58.010 47.619 17.98 4.02 0.00 1.78
4998 7815 2.292267 GGTCTTGGTGCACTGATATGG 58.708 52.381 17.98 0.92 0.00 2.74
4999 7816 2.092968 GGTCTTGGTGCACTGATATGGA 60.093 50.000 17.98 3.28 0.00 3.41
5000 7817 3.609853 GTCTTGGTGCACTGATATGGAA 58.390 45.455 17.98 0.00 0.00 3.53
5001 7818 4.009675 GTCTTGGTGCACTGATATGGAAA 58.990 43.478 17.98 0.00 0.00 3.13
5002 7819 4.009675 TCTTGGTGCACTGATATGGAAAC 58.990 43.478 17.98 0.00 0.00 2.78
5003 7820 2.722094 TGGTGCACTGATATGGAAACC 58.278 47.619 17.98 0.00 0.00 3.27
5004 7821 2.308570 TGGTGCACTGATATGGAAACCT 59.691 45.455 17.98 0.00 0.00 3.50
5005 7822 3.245229 TGGTGCACTGATATGGAAACCTT 60.245 43.478 17.98 0.00 0.00 3.50
5006 7823 3.763897 GGTGCACTGATATGGAAACCTTT 59.236 43.478 17.98 0.00 0.00 3.11
5007 7824 4.380867 GGTGCACTGATATGGAAACCTTTG 60.381 45.833 17.98 0.00 0.00 2.77
5008 7825 3.193267 TGCACTGATATGGAAACCTTTGC 59.807 43.478 0.00 0.00 0.00 3.68
5009 7826 3.429410 GCACTGATATGGAAACCTTTGCC 60.429 47.826 0.00 0.00 0.00 4.52
5010 7827 4.019174 CACTGATATGGAAACCTTTGCCT 58.981 43.478 0.00 0.00 0.00 4.75
5011 7828 4.019174 ACTGATATGGAAACCTTTGCCTG 58.981 43.478 0.00 0.00 0.00 4.85
5012 7829 4.263905 ACTGATATGGAAACCTTTGCCTGA 60.264 41.667 0.00 0.00 0.00 3.86
5013 7830 4.870636 TGATATGGAAACCTTTGCCTGAT 58.129 39.130 0.00 0.00 0.00 2.90
5014 7831 4.646040 TGATATGGAAACCTTTGCCTGATG 59.354 41.667 0.00 0.00 0.00 3.07
5015 7832 0.968405 TGGAAACCTTTGCCTGATGC 59.032 50.000 0.00 0.00 41.77 3.91
5016 7833 0.247460 GGAAACCTTTGCCTGATGCC 59.753 55.000 0.00 0.00 40.16 4.40
5017 7834 1.260544 GAAACCTTTGCCTGATGCCT 58.739 50.000 0.00 0.00 40.16 4.75
5018 7835 1.203287 GAAACCTTTGCCTGATGCCTC 59.797 52.381 0.00 0.00 40.16 4.70
5019 7836 0.962356 AACCTTTGCCTGATGCCTCG 60.962 55.000 0.00 0.00 40.16 4.63
5020 7837 2.117156 CCTTTGCCTGATGCCTCGG 61.117 63.158 0.00 0.00 40.16 4.63
5026 7843 2.818132 CTGATGCCTCGGGACTCC 59.182 66.667 0.00 0.00 0.00 3.85
5027 7844 1.760086 CTGATGCCTCGGGACTCCT 60.760 63.158 0.00 0.00 0.00 3.69
5028 7845 1.743321 CTGATGCCTCGGGACTCCTC 61.743 65.000 0.00 0.00 0.00 3.71
5029 7846 2.835431 ATGCCTCGGGACTCCTCG 60.835 66.667 0.00 0.00 0.00 4.63
5032 7849 4.824515 CCTCGGGACTCCTCGCCT 62.825 72.222 0.00 0.00 0.00 5.52
5033 7850 3.522731 CTCGGGACTCCTCGCCTG 61.523 72.222 0.00 0.00 0.00 4.85
5038 7855 4.443266 GACTCCTCGCCTGCGCTT 62.443 66.667 9.73 0.00 39.59 4.68
5039 7856 4.749310 ACTCCTCGCCTGCGCTTG 62.749 66.667 9.73 0.00 39.59 4.01
5046 7863 3.368571 GCCTGCGCTTGCCTCTTT 61.369 61.111 9.73 0.00 38.03 2.52
5047 7864 2.040544 GCCTGCGCTTGCCTCTTTA 61.041 57.895 9.73 0.00 38.03 1.85
5048 7865 1.986575 GCCTGCGCTTGCCTCTTTAG 61.987 60.000 9.73 0.00 38.03 1.85
5049 7866 1.427020 CTGCGCTTGCCTCTTTAGC 59.573 57.895 9.73 0.00 38.03 3.09
5050 7867 1.300971 CTGCGCTTGCCTCTTTAGCA 61.301 55.000 9.73 0.00 38.81 3.49
5051 7868 1.135523 GCGCTTGCCTCTTTAGCAC 59.864 57.895 0.00 0.00 40.69 4.40
5052 7869 1.796796 CGCTTGCCTCTTTAGCACC 59.203 57.895 0.00 0.00 40.69 5.01
5053 7870 0.955428 CGCTTGCCTCTTTAGCACCA 60.955 55.000 0.00 0.00 40.69 4.17
5054 7871 1.247567 GCTTGCCTCTTTAGCACCAA 58.752 50.000 0.00 0.00 40.69 3.67
5055 7872 1.613437 GCTTGCCTCTTTAGCACCAAA 59.387 47.619 0.00 0.00 40.69 3.28
5056 7873 2.352127 GCTTGCCTCTTTAGCACCAAAG 60.352 50.000 0.00 0.00 40.69 2.77
5057 7874 2.949177 TGCCTCTTTAGCACCAAAGA 57.051 45.000 7.63 7.63 41.18 2.52
5065 7882 4.821805 TCTTTAGCACCAAAGAGGAAACTG 59.178 41.667 4.58 0.00 44.43 3.16
5066 7883 1.986882 AGCACCAAAGAGGAAACTGG 58.013 50.000 0.00 0.00 44.43 4.00
5067 7884 1.215423 AGCACCAAAGAGGAAACTGGT 59.785 47.619 0.00 0.00 44.43 4.00
5068 7885 2.441750 AGCACCAAAGAGGAAACTGGTA 59.558 45.455 0.00 0.00 44.43 3.25
5069 7886 2.552743 GCACCAAAGAGGAAACTGGTAC 59.447 50.000 0.00 0.00 44.43 3.34
5070 7887 3.146847 CACCAAAGAGGAAACTGGTACC 58.853 50.000 4.43 4.43 44.43 3.34
5071 7888 2.107726 ACCAAAGAGGAAACTGGTACCC 59.892 50.000 10.07 0.00 44.43 3.69
5072 7889 2.375509 CCAAAGAGGAAACTGGTACCCT 59.624 50.000 10.07 0.00 44.43 4.34
5073 7890 3.585732 CCAAAGAGGAAACTGGTACCCTA 59.414 47.826 10.07 0.00 44.43 3.53
5074 7891 4.565028 CCAAAGAGGAAACTGGTACCCTAC 60.565 50.000 10.07 0.00 44.43 3.18
5075 7892 2.454538 AGAGGAAACTGGTACCCTACG 58.545 52.381 10.07 0.00 44.43 3.51
5076 7893 0.900421 AGGAAACTGGTACCCTACGC 59.100 55.000 10.07 0.00 41.13 4.42
5077 7894 0.107993 GGAAACTGGTACCCTACGCC 60.108 60.000 10.07 1.79 0.00 5.68
5078 7895 0.107993 GAAACTGGTACCCTACGCCC 60.108 60.000 10.07 0.00 0.00 6.13
5079 7896 1.891722 AAACTGGTACCCTACGCCCG 61.892 60.000 10.07 0.00 0.00 6.13
5080 7897 4.217159 CTGGTACCCTACGCCCGC 62.217 72.222 10.07 0.00 0.00 6.13
5081 7898 4.764771 TGGTACCCTACGCCCGCT 62.765 66.667 10.07 0.00 0.00 5.52
5082 7899 4.217159 GGTACCCTACGCCCGCTG 62.217 72.222 0.00 0.00 0.00 5.18
5083 7900 4.217159 GTACCCTACGCCCGCTGG 62.217 72.222 0.00 0.00 0.00 4.85
5108 7925 2.885644 CGGGCTTCGGTCGTCATG 60.886 66.667 0.00 0.00 34.75 3.07
5109 7926 2.511600 GGGCTTCGGTCGTCATGG 60.512 66.667 0.00 0.00 0.00 3.66
5110 7927 3.195698 GGCTTCGGTCGTCATGGC 61.196 66.667 0.00 0.00 0.00 4.40
5111 7928 2.125512 GCTTCGGTCGTCATGGCT 60.126 61.111 0.00 0.00 0.00 4.75
5112 7929 2.167861 GCTTCGGTCGTCATGGCTC 61.168 63.158 0.00 0.00 0.00 4.70
5113 7930 1.215382 CTTCGGTCGTCATGGCTCA 59.785 57.895 0.00 0.00 0.00 4.26
5114 7931 1.078759 CTTCGGTCGTCATGGCTCAC 61.079 60.000 0.00 0.00 0.00 3.51
5115 7932 2.812542 TTCGGTCGTCATGGCTCACG 62.813 60.000 0.00 0.00 37.36 4.35
5116 7933 2.261671 GGTCGTCATGGCTCACGT 59.738 61.111 0.00 0.00 37.30 4.49
5117 7934 1.805945 GGTCGTCATGGCTCACGTC 60.806 63.158 0.00 0.00 37.30 4.34
5118 7935 1.080772 GTCGTCATGGCTCACGTCA 60.081 57.895 0.00 0.00 37.30 4.35
5119 7936 0.458543 GTCGTCATGGCTCACGTCAT 60.459 55.000 0.00 0.00 35.41 3.06
5130 7947 4.261888 ACGTCATGTGAACCTCGC 57.738 55.556 0.00 0.00 0.00 5.03
5131 7948 1.733041 ACGTCATGTGAACCTCGCG 60.733 57.895 0.00 0.00 0.00 5.87
5132 7949 1.443702 CGTCATGTGAACCTCGCGA 60.444 57.895 9.26 9.26 0.00 5.87
5133 7950 1.406219 CGTCATGTGAACCTCGCGAG 61.406 60.000 29.06 29.06 0.00 5.03
5150 7967 4.344865 GGTGCCCTCCGCCTTGAA 62.345 66.667 0.00 0.00 41.07 2.69
5151 7968 3.056328 GTGCCCTCCGCCTTGAAC 61.056 66.667 0.00 0.00 36.24 3.18
5152 7969 3.249189 TGCCCTCCGCCTTGAACT 61.249 61.111 0.00 0.00 36.24 3.01
5153 7970 1.916273 TGCCCTCCGCCTTGAACTA 60.916 57.895 0.00 0.00 36.24 2.24
5154 7971 1.271840 TGCCCTCCGCCTTGAACTAT 61.272 55.000 0.00 0.00 36.24 2.12
5155 7972 0.533085 GCCCTCCGCCTTGAACTATC 60.533 60.000 0.00 0.00 0.00 2.08
5156 7973 0.106894 CCCTCCGCCTTGAACTATCC 59.893 60.000 0.00 0.00 0.00 2.59
5157 7974 0.249489 CCTCCGCCTTGAACTATCCG 60.249 60.000 0.00 0.00 0.00 4.18
5158 7975 0.876342 CTCCGCCTTGAACTATCCGC 60.876 60.000 0.00 0.00 0.00 5.54
5159 7976 1.144057 CCGCCTTGAACTATCCGCT 59.856 57.895 0.00 0.00 0.00 5.52
5160 7977 0.876342 CCGCCTTGAACTATCCGCTC 60.876 60.000 0.00 0.00 0.00 5.03
5161 7978 0.876342 CGCCTTGAACTATCCGCTCC 60.876 60.000 0.00 0.00 0.00 4.70
5162 7979 0.466124 GCCTTGAACTATCCGCTCCT 59.534 55.000 0.00 0.00 0.00 3.69
5163 7980 1.539280 GCCTTGAACTATCCGCTCCTC 60.539 57.143 0.00 0.00 0.00 3.71
5164 7981 1.269309 CCTTGAACTATCCGCTCCTCG 60.269 57.143 0.00 0.00 38.08 4.63
5165 7982 0.102481 TTGAACTATCCGCTCCTCGC 59.898 55.000 0.00 0.00 36.73 5.03
5176 7993 4.815108 TCCTCGCGAGCCAGCCTA 62.815 66.667 30.49 6.14 0.00 3.93
5177 7994 4.277593 CCTCGCGAGCCAGCCTAG 62.278 72.222 30.49 10.45 0.00 3.02
5178 7995 3.522731 CTCGCGAGCCAGCCTAGT 61.523 66.667 25.07 0.00 0.00 2.57
5179 7996 3.764810 CTCGCGAGCCAGCCTAGTG 62.765 68.421 25.07 0.00 0.00 2.74
5180 7997 3.826754 CGCGAGCCAGCCTAGTGA 61.827 66.667 0.00 0.00 0.00 3.41
5181 7998 2.105930 GCGAGCCAGCCTAGTGAG 59.894 66.667 0.00 0.00 0.00 3.51
5182 7999 2.811101 CGAGCCAGCCTAGTGAGG 59.189 66.667 0.00 0.00 46.93 3.86
5191 8008 1.075226 CCTAGTGAGGCTGCCCCTA 60.075 63.158 16.57 12.05 46.60 3.53
5192 8009 0.691078 CCTAGTGAGGCTGCCCCTAA 60.691 60.000 16.57 0.00 46.60 2.69
5193 8010 0.755686 CTAGTGAGGCTGCCCCTAAG 59.244 60.000 16.57 3.13 46.60 2.18
5194 8011 0.691078 TAGTGAGGCTGCCCCTAAGG 60.691 60.000 16.57 0.00 46.60 2.69
5195 8012 1.995626 GTGAGGCTGCCCCTAAGGA 60.996 63.158 16.57 0.00 46.60 3.36
5196 8013 1.690633 TGAGGCTGCCCCTAAGGAG 60.691 63.158 16.57 0.00 46.60 3.69
5197 8014 2.367512 AGGCTGCCCCTAAGGAGG 60.368 66.667 16.57 0.00 44.08 4.30
5198 8015 2.692741 GGCTGCCCCTAAGGAGGT 60.693 66.667 7.66 0.00 41.95 3.85
5199 8016 2.747443 GGCTGCCCCTAAGGAGGTC 61.747 68.421 7.66 0.00 41.95 3.85
5200 8017 1.690985 GCTGCCCCTAAGGAGGTCT 60.691 63.158 0.00 0.00 41.95 3.85
5201 8018 1.275421 GCTGCCCCTAAGGAGGTCTT 61.275 60.000 0.00 0.00 41.95 3.01
5202 8019 0.543749 CTGCCCCTAAGGAGGTCTTG 59.456 60.000 0.00 0.00 41.95 3.02
5203 8020 1.224870 GCCCCTAAGGAGGTCTTGC 59.775 63.158 0.00 0.00 41.95 4.01
5204 8021 1.522569 CCCCTAAGGAGGTCTTGCG 59.477 63.158 0.00 0.00 41.95 4.85
5205 8022 1.265454 CCCCTAAGGAGGTCTTGCGT 61.265 60.000 0.00 0.00 41.95 5.24
5206 8023 0.175989 CCCTAAGGAGGTCTTGCGTC 59.824 60.000 0.00 0.00 41.95 5.19
5207 8024 0.179134 CCTAAGGAGGTCTTGCGTCG 60.179 60.000 0.00 0.00 38.16 5.12
5208 8025 0.526662 CTAAGGAGGTCTTGCGTCGT 59.473 55.000 0.00 0.00 36.93 4.34
5209 8026 0.524862 TAAGGAGGTCTTGCGTCGTC 59.475 55.000 0.00 0.00 36.93 4.20
5210 8027 2.126031 GGAGGTCTTGCGTCGTCC 60.126 66.667 0.00 0.00 33.10 4.79
5211 8028 2.504244 GAGGTCTTGCGTCGTCCG 60.504 66.667 0.00 0.00 40.40 4.79
5246 8063 2.492090 CCTCGCGAGGGTCTTCAG 59.508 66.667 41.47 17.83 44.87 3.02
5247 8064 2.344203 CCTCGCGAGGGTCTTCAGT 61.344 63.158 41.47 0.00 44.87 3.41
5248 8065 1.153939 CTCGCGAGGGTCTTCAGTG 60.154 63.158 28.40 0.00 0.00 3.66
5249 8066 2.125912 CGCGAGGGTCTTCAGTGG 60.126 66.667 0.00 0.00 0.00 4.00
5250 8067 2.932234 CGCGAGGGTCTTCAGTGGT 61.932 63.158 0.00 0.00 0.00 4.16
5251 8068 1.371558 GCGAGGGTCTTCAGTGGTT 59.628 57.895 0.00 0.00 0.00 3.67
5252 8069 0.250338 GCGAGGGTCTTCAGTGGTTT 60.250 55.000 0.00 0.00 0.00 3.27
5253 8070 1.512926 CGAGGGTCTTCAGTGGTTTG 58.487 55.000 0.00 0.00 0.00 2.93
5254 8071 1.202651 CGAGGGTCTTCAGTGGTTTGT 60.203 52.381 0.00 0.00 0.00 2.83
5255 8072 2.745152 CGAGGGTCTTCAGTGGTTTGTT 60.745 50.000 0.00 0.00 0.00 2.83
5256 8073 2.618709 GAGGGTCTTCAGTGGTTTGTTG 59.381 50.000 0.00 0.00 0.00 3.33
5257 8074 1.681264 GGGTCTTCAGTGGTTTGTTGG 59.319 52.381 0.00 0.00 0.00 3.77
5258 8075 2.375146 GGTCTTCAGTGGTTTGTTGGT 58.625 47.619 0.00 0.00 0.00 3.67
5259 8076 2.099098 GGTCTTCAGTGGTTTGTTGGTG 59.901 50.000 0.00 0.00 0.00 4.17
5260 8077 3.013921 GTCTTCAGTGGTTTGTTGGTGA 58.986 45.455 0.00 0.00 0.00 4.02
5261 8078 3.442273 GTCTTCAGTGGTTTGTTGGTGAA 59.558 43.478 0.00 0.00 0.00 3.18
5262 8079 3.694072 TCTTCAGTGGTTTGTTGGTGAAG 59.306 43.478 3.94 3.94 41.40 3.02
5263 8080 3.358111 TCAGTGGTTTGTTGGTGAAGA 57.642 42.857 0.00 0.00 0.00 2.87
5264 8081 3.897239 TCAGTGGTTTGTTGGTGAAGAT 58.103 40.909 0.00 0.00 0.00 2.40
5265 8082 3.631686 TCAGTGGTTTGTTGGTGAAGATG 59.368 43.478 0.00 0.00 0.00 2.90
5266 8083 2.958355 AGTGGTTTGTTGGTGAAGATGG 59.042 45.455 0.00 0.00 0.00 3.51
5267 8084 2.035832 GTGGTTTGTTGGTGAAGATGGG 59.964 50.000 0.00 0.00 0.00 4.00
5268 8085 1.000843 GGTTTGTTGGTGAAGATGGGC 59.999 52.381 0.00 0.00 0.00 5.36
5269 8086 1.000843 GTTTGTTGGTGAAGATGGGCC 59.999 52.381 0.00 0.00 0.00 5.80
5270 8087 0.893270 TTGTTGGTGAAGATGGGCCG 60.893 55.000 0.00 0.00 0.00 6.13
5271 8088 1.303317 GTTGGTGAAGATGGGCCGT 60.303 57.895 0.00 0.00 0.00 5.68
5272 8089 0.035820 GTTGGTGAAGATGGGCCGTA 60.036 55.000 0.00 0.00 0.00 4.02
5273 8090 0.035820 TTGGTGAAGATGGGCCGTAC 60.036 55.000 0.00 0.00 0.00 3.67
5274 8091 1.153229 GGTGAAGATGGGCCGTACC 60.153 63.158 0.00 0.00 37.93 3.34
5275 8092 1.600107 GTGAAGATGGGCCGTACCA 59.400 57.895 0.00 0.00 46.24 3.25
5276 8093 0.462047 GTGAAGATGGGCCGTACCAG 60.462 60.000 0.00 0.00 45.20 4.00
5277 8094 1.146263 GAAGATGGGCCGTACCAGG 59.854 63.158 0.00 0.00 45.20 4.45
5285 8102 4.388499 CCGTACCAGGCCGTTGCT 62.388 66.667 0.00 0.00 37.74 3.91
5286 8103 3.118454 CGTACCAGGCCGTTGCTG 61.118 66.667 0.00 0.00 37.74 4.41
5287 8104 2.746277 GTACCAGGCCGTTGCTGG 60.746 66.667 6.43 6.43 39.92 4.85
5288 8105 2.925706 TACCAGGCCGTTGCTGGA 60.926 61.111 14.61 0.00 38.43 3.86
5289 8106 2.954684 TACCAGGCCGTTGCTGGAG 61.955 63.158 14.61 0.00 38.43 3.86
5298 8115 4.349503 TTGCTGGAGCCACGCCAT 62.350 61.111 0.00 0.00 41.18 4.40
5299 8116 2.965520 TTGCTGGAGCCACGCCATA 61.966 57.895 0.00 0.00 41.18 2.74
5300 8117 2.590007 GCTGGAGCCACGCCATAG 60.590 66.667 0.00 0.00 31.99 2.23
5301 8118 2.109799 CTGGAGCCACGCCATAGG 59.890 66.667 0.00 0.00 31.99 2.57
5302 8119 2.687200 TGGAGCCACGCCATAGGT 60.687 61.111 0.00 0.00 0.00 3.08
5303 8120 2.109181 GGAGCCACGCCATAGGTC 59.891 66.667 0.00 0.00 0.00 3.85
5304 8121 2.279517 GAGCCACGCCATAGGTCG 60.280 66.667 0.00 0.00 0.00 4.79
5305 8122 4.530857 AGCCACGCCATAGGTCGC 62.531 66.667 0.00 0.00 0.00 5.19
5306 8123 4.830765 GCCACGCCATAGGTCGCA 62.831 66.667 0.00 0.00 0.00 5.10
5307 8124 2.890474 CCACGCCATAGGTCGCAC 60.890 66.667 0.00 0.00 0.00 5.34
5308 8125 3.254654 CACGCCATAGGTCGCACG 61.255 66.667 0.00 0.00 0.00 5.34
5311 8128 3.264897 GCCATAGGTCGCACGCAG 61.265 66.667 0.00 0.00 0.00 5.18
5312 8129 2.586079 CCATAGGTCGCACGCAGG 60.586 66.667 0.00 0.00 0.00 4.85
5313 8130 3.264897 CATAGGTCGCACGCAGGC 61.265 66.667 0.00 0.00 0.00 4.85
5314 8131 3.770040 ATAGGTCGCACGCAGGCA 61.770 61.111 0.00 0.00 0.00 4.75
5315 8132 3.309436 ATAGGTCGCACGCAGGCAA 62.309 57.895 0.00 0.00 0.00 4.52
5316 8133 3.932580 TAGGTCGCACGCAGGCAAG 62.933 63.158 0.00 0.00 0.00 4.01
5318 8135 4.077188 GTCGCACGCAGGCAAGTC 62.077 66.667 0.00 0.00 0.00 3.01
5319 8136 4.299547 TCGCACGCAGGCAAGTCT 62.300 61.111 0.00 0.00 0.00 3.24
5320 8137 4.081030 CGCACGCAGGCAAGTCTG 62.081 66.667 0.00 0.00 37.79 3.51
5321 8138 3.730761 GCACGCAGGCAAGTCTGG 61.731 66.667 3.62 0.00 35.43 3.86
5324 8141 4.020617 CGCAGGCAAGTCTGGGGA 62.021 66.667 10.50 0.00 41.95 4.81
5325 8142 2.360475 GCAGGCAAGTCTGGGGAC 60.360 66.667 3.62 0.00 42.41 4.46
5339 8156 2.999063 GGACCCCCGTTCCGAGAA 60.999 66.667 0.00 0.00 0.00 2.87
5340 8157 2.263852 GACCCCCGTTCCGAGAAC 59.736 66.667 6.68 6.68 0.00 3.01
5341 8158 3.637926 GACCCCCGTTCCGAGAACG 62.638 68.421 23.61 23.61 42.74 3.95
5345 8162 4.409218 CCGTTCCGAGAACGCCGA 62.409 66.667 24.57 0.00 41.85 5.54
5346 8163 3.170585 CGTTCCGAGAACGCCGAC 61.171 66.667 20.64 0.00 36.82 4.79
5347 8164 2.049802 GTTCCGAGAACGCCGACA 60.050 61.111 0.00 0.00 38.29 4.35
5348 8165 1.662446 GTTCCGAGAACGCCGACAA 60.662 57.895 0.00 0.00 38.29 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.314256 GCAGCAAGCATCATCGCTA 58.686 52.632 0.00 0.00 42.89 4.26
60 61 1.069823 CTCCCCGTCATTCTCCATCAG 59.930 57.143 0.00 0.00 0.00 2.90
183 186 0.179134 CTTTCTTCCGTCGATCCGCT 60.179 55.000 0.00 0.00 0.00 5.52
282 288 1.478510 GGGAAGAGAGATCTTCGTGCA 59.521 52.381 10.88 0.00 45.11 4.57
305 313 1.400142 AGATCGTTGAGAGAGTGAGCG 59.600 52.381 0.00 0.00 0.00 5.03
312 320 1.478510 GGCCTTGAGATCGTTGAGAGA 59.521 52.381 0.00 0.00 0.00 3.10
395 407 0.904649 CTGGAGTAGGGCATGACACA 59.095 55.000 0.00 0.00 0.00 3.72
400 412 0.107508 CCACACTGGAGTAGGGCATG 60.108 60.000 0.00 0.00 40.96 4.06
403 415 1.296715 CACCACACTGGAGTAGGGC 59.703 63.158 0.00 0.00 40.96 5.19
438 450 2.027192 TGTACTTGTTCATCCTCAGCCC 60.027 50.000 0.00 0.00 0.00 5.19
500 512 1.475751 CCTCAACCACACAAGCTCACT 60.476 52.381 0.00 0.00 0.00 3.41
560 589 0.107017 CACCACCATAGAAGGGCAGG 60.107 60.000 0.00 0.00 0.00 4.85
563 600 1.453928 GCCACCACCATAGAAGGGC 60.454 63.158 0.00 0.00 0.00 5.19
602 639 3.611025 AACATTTGGGAAGAGGACCAA 57.389 42.857 0.00 0.00 44.53 3.67
606 643 3.697166 GCCTAAACATTTGGGAAGAGGA 58.303 45.455 10.68 0.00 40.88 3.71
607 644 2.423538 CGCCTAAACATTTGGGAAGAGG 59.576 50.000 10.68 0.00 40.88 3.69
608 645 2.423538 CCGCCTAAACATTTGGGAAGAG 59.576 50.000 10.68 0.00 40.88 2.85
609 646 2.442413 CCGCCTAAACATTTGGGAAGA 58.558 47.619 10.68 0.00 40.88 2.87
610 647 1.476488 CCCGCCTAAACATTTGGGAAG 59.524 52.381 10.68 3.87 40.88 3.46
611 648 1.075698 TCCCGCCTAAACATTTGGGAA 59.924 47.619 10.68 0.00 42.51 3.97
612 649 0.699399 TCCCGCCTAAACATTTGGGA 59.301 50.000 10.68 3.83 40.88 4.37
613 650 1.476488 CTTCCCGCCTAAACATTTGGG 59.524 52.381 2.51 2.51 41.28 4.12
614 651 1.476488 CCTTCCCGCCTAAACATTTGG 59.524 52.381 0.00 0.00 0.00 3.28
615 652 1.476488 CCCTTCCCGCCTAAACATTTG 59.524 52.381 0.00 0.00 0.00 2.32
616 653 1.076513 ACCCTTCCCGCCTAAACATTT 59.923 47.619 0.00 0.00 0.00 2.32
617 654 0.702316 ACCCTTCCCGCCTAAACATT 59.298 50.000 0.00 0.00 0.00 2.71
618 655 0.702316 AACCCTTCCCGCCTAAACAT 59.298 50.000 0.00 0.00 0.00 2.71
619 656 0.037160 GAACCCTTCCCGCCTAAACA 59.963 55.000 0.00 0.00 0.00 2.83
620 657 0.679002 GGAACCCTTCCCGCCTAAAC 60.679 60.000 0.00 0.00 44.30 2.01
621 658 1.687014 GGAACCCTTCCCGCCTAAA 59.313 57.895 0.00 0.00 44.30 1.85
622 659 3.407075 GGAACCCTTCCCGCCTAA 58.593 61.111 0.00 0.00 44.30 2.69
631 668 7.609059 CAAATTGGTTGTTGTGGGAACCCTT 62.609 44.000 11.38 0.00 40.94 3.95
632 669 6.203926 CAAATTGGTTGTTGTGGGAACCCT 62.204 45.833 11.38 0.00 40.94 4.34
633 670 3.991744 CAAATTGGTTGTTGTGGGAACCC 60.992 47.826 2.46 2.46 40.94 4.11
634 671 3.118592 TCAAATTGGTTGTTGTGGGAACC 60.119 43.478 0.00 0.00 43.75 3.62
635 672 4.130286 TCAAATTGGTTGTTGTGGGAAC 57.870 40.909 0.00 0.00 38.47 3.62
636 673 4.383552 CCTTCAAATTGGTTGTTGTGGGAA 60.384 41.667 0.00 0.00 38.47 3.97
637 674 3.133721 CCTTCAAATTGGTTGTTGTGGGA 59.866 43.478 0.00 0.00 38.47 4.37
638 675 3.465871 CCTTCAAATTGGTTGTTGTGGG 58.534 45.455 0.00 0.00 38.47 4.61
639 676 3.465871 CCCTTCAAATTGGTTGTTGTGG 58.534 45.455 0.00 0.00 38.47 4.17
640 677 3.465871 CCCCTTCAAATTGGTTGTTGTG 58.534 45.455 0.00 0.00 38.47 3.33
641 678 2.437651 CCCCCTTCAAATTGGTTGTTGT 59.562 45.455 0.00 0.00 38.47 3.32
642 679 2.703007 TCCCCCTTCAAATTGGTTGTTG 59.297 45.455 0.00 0.00 38.47 3.33
643 680 2.703536 GTCCCCCTTCAAATTGGTTGTT 59.296 45.455 0.00 0.00 38.47 2.83
644 681 2.325484 GTCCCCCTTCAAATTGGTTGT 58.675 47.619 0.00 0.00 38.47 3.32
645 682 2.324541 TGTCCCCCTTCAAATTGGTTG 58.675 47.619 0.00 0.00 38.71 3.77
646 683 2.703536 GTTGTCCCCCTTCAAATTGGTT 59.296 45.455 0.00 0.00 0.00 3.67
647 684 2.090775 AGTTGTCCCCCTTCAAATTGGT 60.091 45.455 0.00 0.00 0.00 3.67
648 685 2.608623 AGTTGTCCCCCTTCAAATTGG 58.391 47.619 0.00 0.00 0.00 3.16
649 686 4.407365 ACTAGTTGTCCCCCTTCAAATTG 58.593 43.478 0.00 0.00 0.00 2.32
650 687 4.741928 ACTAGTTGTCCCCCTTCAAATT 57.258 40.909 0.00 0.00 0.00 1.82
651 688 4.600111 TGTACTAGTTGTCCCCCTTCAAAT 59.400 41.667 0.00 0.00 0.00 2.32
652 689 3.975312 TGTACTAGTTGTCCCCCTTCAAA 59.025 43.478 0.00 0.00 0.00 2.69
653 690 3.589641 TGTACTAGTTGTCCCCCTTCAA 58.410 45.455 0.00 0.00 0.00 2.69
654 691 3.263369 TGTACTAGTTGTCCCCCTTCA 57.737 47.619 0.00 0.00 0.00 3.02
655 692 4.202388 TGTTTGTACTAGTTGTCCCCCTTC 60.202 45.833 0.00 0.00 0.00 3.46
656 693 3.717913 TGTTTGTACTAGTTGTCCCCCTT 59.282 43.478 0.00 0.00 0.00 3.95
657 694 3.072038 GTGTTTGTACTAGTTGTCCCCCT 59.928 47.826 0.00 0.00 0.00 4.79
658 695 3.072038 AGTGTTTGTACTAGTTGTCCCCC 59.928 47.826 0.00 0.00 0.00 5.40
659 696 4.347360 AGTGTTTGTACTAGTTGTCCCC 57.653 45.455 0.00 0.00 0.00 4.81
660 697 6.094193 AGTAGTGTTTGTACTAGTTGTCCC 57.906 41.667 0.00 0.00 34.03 4.46
661 698 9.533253 TTTTAGTAGTGTTTGTACTAGTTGTCC 57.467 33.333 0.00 0.00 37.79 4.02
691 728 7.175641 CCATTAATGCCCATATTAGCTATAGCC 59.824 40.741 21.17 3.64 43.38 3.93
759 796 1.447317 GGCGCACCCATATCTGGTTG 61.447 60.000 10.83 0.00 41.37 3.77
760 797 1.152963 GGCGCACCCATATCTGGTT 60.153 57.895 10.83 0.00 41.37 3.67
796 834 0.323360 ATACACCAGGTGCGCCATTT 60.323 50.000 20.48 0.27 36.98 2.32
814 852 5.183228 ACAAAACTAGTAATAGCGCACCAT 58.817 37.500 11.47 0.00 0.00 3.55
823 861 4.080186 GGGGCCAGGACAAAACTAGTAATA 60.080 45.833 4.39 0.00 0.00 0.98
853 891 1.065126 GCCACTGCTAAGTCTGGGAAT 60.065 52.381 0.00 0.00 32.98 3.01
855 893 1.888436 CGCCACTGCTAAGTCTGGGA 61.888 60.000 0.00 0.00 32.98 4.37
867 951 1.005037 TCTTACTGGTGCGCCACTG 60.005 57.895 16.89 9.69 40.46 3.66
869 953 0.108138 ATCTCTTACTGGTGCGCCAC 60.108 55.000 16.89 2.79 40.46 5.01
984 1068 1.003233 GGGTGTGTCAGGAGGAAGC 60.003 63.158 0.00 0.00 0.00 3.86
1474 2120 3.044894 GTTGAGGAGGAGGATGAAGGAT 58.955 50.000 0.00 0.00 0.00 3.24
1890 2940 6.803320 ACTTGTTGCAATTGAATCATAAGACG 59.197 34.615 10.34 0.00 0.00 4.18
1901 2951 4.024387 GTCTACGGAACTTGTTGCAATTGA 60.024 41.667 10.34 0.00 0.00 2.57
1916 2966 6.323996 AGGATCATCAATTAACTGTCTACGGA 59.676 38.462 0.00 0.00 0.00 4.69
2489 3552 6.909909 AGATCCATTCAAACTAAAACCGTTC 58.090 36.000 0.00 0.00 0.00 3.95
2725 3793 5.871324 AGAAGGAAAAATAGGGGTTACCA 57.129 39.130 2.98 0.00 43.89 3.25
2940 4470 2.099098 GGTATCAAATTCAACGCAGGGG 59.901 50.000 0.00 0.00 0.00 4.79
3002 4549 2.552315 AGATGCGGAACATGAAAAACGT 59.448 40.909 0.00 0.00 39.84 3.99
3075 5794 0.723414 CGACGACGACTAGGTTGCTA 59.277 55.000 0.00 0.00 42.66 3.49
3178 5907 0.958822 TAGTGCAGACGCTGTTGAGA 59.041 50.000 8.32 0.00 37.19 3.27
3432 6165 2.884012 ACAACAGTTGATCCATGCGAAA 59.116 40.909 20.56 0.00 0.00 3.46
3452 6185 9.974980 TGAACTTTATCCTCCACAAAATAAAAC 57.025 29.630 0.00 0.00 0.00 2.43
3519 6253 2.795231 ATGAGGTTCAGGACATGTGG 57.205 50.000 1.15 0.00 0.00 4.17
3594 6328 8.420222 ACATGTCAAATTAATTGTTCCTGTCAA 58.580 29.630 0.39 0.00 40.11 3.18
3888 6630 1.592669 CAGATGGCCGGCGACTTAG 60.593 63.158 22.54 4.55 0.00 2.18
3914 6656 8.849168 TCACATTGAGCTAGAAAGAAAATTCAA 58.151 29.630 0.00 0.00 0.00 2.69
3953 6695 5.536554 ACAAGAGCAAATCTGAACGTATG 57.463 39.130 0.00 0.00 38.67 2.39
3954 6696 6.560253 AAACAAGAGCAAATCTGAACGTAT 57.440 33.333 0.00 0.00 38.67 3.06
4026 6776 2.166459 TCTCATCGGTTCAAGTGGCTAG 59.834 50.000 0.00 0.00 0.00 3.42
4063 6813 6.299805 AGACATCTGTTCAAGTGGCTATAA 57.700 37.500 0.00 0.00 0.00 0.98
4366 7171 8.415950 TTTCTTCACTTTATCCCTGCAAAATA 57.584 30.769 0.00 0.00 0.00 1.40
4371 7177 6.068010 TCTTTTTCTTCACTTTATCCCTGCA 58.932 36.000 0.00 0.00 0.00 4.41
4626 7442 5.626116 CGCCACTAGTAATAAAGGAAGGTGT 60.626 44.000 0.00 0.00 0.00 4.16
4764 7581 2.745281 TGTTAGTAATGGCGCACCTTTC 59.255 45.455 10.83 0.00 35.14 2.62
4803 7620 2.677199 CACTATAGGTGCGCCACTATG 58.323 52.381 20.59 17.20 39.22 2.23
4825 7642 5.011533 TGCACCAGTTTTTGCTATTAATGGT 59.988 36.000 0.00 0.00 40.34 3.55
4880 7697 3.262420 CGACCACCTTTTGTCAGGATAG 58.738 50.000 0.00 0.00 37.39 2.08
4881 7698 2.635915 ACGACCACCTTTTGTCAGGATA 59.364 45.455 0.00 0.00 37.39 2.59
4882 7699 1.420138 ACGACCACCTTTTGTCAGGAT 59.580 47.619 0.00 0.00 37.39 3.24
4883 7700 0.834612 ACGACCACCTTTTGTCAGGA 59.165 50.000 0.00 0.00 37.39 3.86
4884 7701 1.226746 GACGACCACCTTTTGTCAGG 58.773 55.000 0.00 0.00 40.23 3.86
4885 7702 0.859232 CGACGACCACCTTTTGTCAG 59.141 55.000 0.00 0.00 0.00 3.51
4886 7703 1.155424 GCGACGACCACCTTTTGTCA 61.155 55.000 0.00 0.00 0.00 3.58
4887 7704 1.568025 GCGACGACCACCTTTTGTC 59.432 57.895 0.00 0.00 0.00 3.18
4888 7705 1.890510 GGCGACGACCACCTTTTGT 60.891 57.895 0.00 0.00 0.00 2.83
4889 7706 1.597027 AGGCGACGACCACCTTTTG 60.597 57.895 0.00 0.00 0.00 2.44
4890 7707 1.597027 CAGGCGACGACCACCTTTT 60.597 57.895 0.00 0.00 0.00 2.27
4891 7708 2.030562 CAGGCGACGACCACCTTT 59.969 61.111 0.00 0.00 0.00 3.11
4892 7709 4.681978 GCAGGCGACGACCACCTT 62.682 66.667 0.00 0.00 0.00 3.50
4895 7712 4.980805 TTGGCAGGCGACGACCAC 62.981 66.667 4.61 0.00 39.49 4.16
4896 7713 4.243008 TTTGGCAGGCGACGACCA 62.243 61.111 0.00 0.55 38.25 4.02
4897 7714 3.423154 CTTTGGCAGGCGACGACC 61.423 66.667 0.00 0.00 0.00 4.79
4898 7715 3.423154 CCTTTGGCAGGCGACGAC 61.423 66.667 0.00 0.00 35.13 4.34
4909 7726 0.394352 ATTACCGCCAGAGCCTTTGG 60.394 55.000 0.00 0.00 38.78 3.28
4910 7727 0.734889 CATTACCGCCAGAGCCTTTG 59.265 55.000 0.00 0.00 34.57 2.77
4911 7728 1.032114 GCATTACCGCCAGAGCCTTT 61.032 55.000 0.00 0.00 34.57 3.11
4912 7729 1.452108 GCATTACCGCCAGAGCCTT 60.452 57.895 0.00 0.00 34.57 4.35
4913 7730 2.190578 GCATTACCGCCAGAGCCT 59.809 61.111 0.00 0.00 34.57 4.58
4935 7752 4.699522 GGTCACCACGGAGCCCAC 62.700 72.222 0.00 0.00 0.00 4.61
4936 7753 4.954118 AGGTCACCACGGAGCCCA 62.954 66.667 0.00 0.00 35.95 5.36
4937 7754 4.083862 GAGGTCACCACGGAGCCC 62.084 72.222 0.00 0.00 35.95 5.19
4938 7755 4.083862 GGAGGTCACCACGGAGCC 62.084 72.222 0.00 0.00 35.95 4.70
4939 7756 4.436998 CGGAGGTCACCACGGAGC 62.437 72.222 0.00 0.00 35.57 4.70
4940 7757 2.989824 ACGGAGGTCACCACGGAG 60.990 66.667 14.51 0.00 32.12 4.63
4941 7758 2.987547 GACGGAGGTCACCACGGA 60.988 66.667 14.51 0.00 42.91 4.69
4942 7759 2.571216 AAGACGGAGGTCACCACGG 61.571 63.158 14.51 6.59 45.92 4.94
4943 7760 1.372997 CAAGACGGAGGTCACCACG 60.373 63.158 9.19 9.19 45.92 4.94
4944 7761 1.668151 GCAAGACGGAGGTCACCAC 60.668 63.158 0.00 0.00 45.92 4.16
4945 7762 1.837051 AGCAAGACGGAGGTCACCA 60.837 57.895 0.00 0.00 45.92 4.17
4946 7763 1.374758 CAGCAAGACGGAGGTCACC 60.375 63.158 0.00 0.00 45.92 4.02
4947 7764 0.667792 GACAGCAAGACGGAGGTCAC 60.668 60.000 0.00 0.00 45.92 3.67
4948 7765 1.666011 GACAGCAAGACGGAGGTCA 59.334 57.895 0.00 0.00 45.92 4.02
4949 7766 1.079750 GGACAGCAAGACGGAGGTC 60.080 63.158 0.00 0.00 43.76 3.85
4950 7767 1.534235 AGGACAGCAAGACGGAGGT 60.534 57.895 0.00 0.00 0.00 3.85
4951 7768 1.079543 CAGGACAGCAAGACGGAGG 60.080 63.158 0.00 0.00 0.00 4.30
4952 7769 1.079543 CCAGGACAGCAAGACGGAG 60.080 63.158 0.00 0.00 0.00 4.63
4953 7770 1.837051 ACCAGGACAGCAAGACGGA 60.837 57.895 0.00 0.00 0.00 4.69
4954 7771 1.669115 CACCAGGACAGCAAGACGG 60.669 63.158 0.00 0.00 0.00 4.79
4955 7772 1.669115 CCACCAGGACAGCAAGACG 60.669 63.158 0.00 0.00 36.89 4.18
4956 7773 0.603975 GACCACCAGGACAGCAAGAC 60.604 60.000 0.00 0.00 38.69 3.01
4957 7774 0.764369 AGACCACCAGGACAGCAAGA 60.764 55.000 0.00 0.00 38.69 3.02
4958 7775 0.109342 AAGACCACCAGGACAGCAAG 59.891 55.000 0.00 0.00 38.69 4.01
4959 7776 0.179020 CAAGACCACCAGGACAGCAA 60.179 55.000 0.00 0.00 38.69 3.91
4960 7777 1.451504 CAAGACCACCAGGACAGCA 59.548 57.895 0.00 0.00 38.69 4.41
4961 7778 1.302832 CCAAGACCACCAGGACAGC 60.303 63.158 0.00 0.00 38.69 4.40
4962 7779 0.035458 GACCAAGACCACCAGGACAG 59.965 60.000 0.00 0.00 38.69 3.51
4963 7780 0.399949 AGACCAAGACCACCAGGACA 60.400 55.000 0.00 0.00 38.69 4.02
4964 7781 0.765510 AAGACCAAGACCACCAGGAC 59.234 55.000 0.00 0.00 38.69 3.85
4965 7782 0.764890 CAAGACCAAGACCACCAGGA 59.235 55.000 0.00 0.00 38.69 3.86
4966 7783 0.250901 CCAAGACCAAGACCACCAGG 60.251 60.000 0.00 0.00 42.21 4.45
4967 7784 0.474184 ACCAAGACCAAGACCACCAG 59.526 55.000 0.00 0.00 0.00 4.00
4968 7785 0.182537 CACCAAGACCAAGACCACCA 59.817 55.000 0.00 0.00 0.00 4.17
4969 7786 1.172812 GCACCAAGACCAAGACCACC 61.173 60.000 0.00 0.00 0.00 4.61
4970 7787 0.465460 TGCACCAAGACCAAGACCAC 60.465 55.000 0.00 0.00 0.00 4.16
4971 7788 0.465460 GTGCACCAAGACCAAGACCA 60.465 55.000 5.22 0.00 0.00 4.02
4972 7789 0.179018 AGTGCACCAAGACCAAGACC 60.179 55.000 14.63 0.00 0.00 3.85
4973 7790 0.947244 CAGTGCACCAAGACCAAGAC 59.053 55.000 14.63 0.00 0.00 3.01
4974 7791 0.836606 TCAGTGCACCAAGACCAAGA 59.163 50.000 14.63 0.00 0.00 3.02
4975 7792 1.901591 ATCAGTGCACCAAGACCAAG 58.098 50.000 14.63 0.00 0.00 3.61
4976 7793 3.346315 CATATCAGTGCACCAAGACCAA 58.654 45.455 14.63 0.00 0.00 3.67
4977 7794 2.356022 CCATATCAGTGCACCAAGACCA 60.356 50.000 14.63 2.02 0.00 4.02
4978 7795 2.092968 TCCATATCAGTGCACCAAGACC 60.093 50.000 14.63 0.00 0.00 3.85
4979 7796 3.266510 TCCATATCAGTGCACCAAGAC 57.733 47.619 14.63 0.00 0.00 3.01
4980 7797 3.998913 TTCCATATCAGTGCACCAAGA 57.001 42.857 14.63 10.03 0.00 3.02
4981 7798 3.129287 GGTTTCCATATCAGTGCACCAAG 59.871 47.826 14.63 4.03 0.00 3.61
4982 7799 3.088532 GGTTTCCATATCAGTGCACCAA 58.911 45.455 14.63 1.52 0.00 3.67
4983 7800 2.308570 AGGTTTCCATATCAGTGCACCA 59.691 45.455 14.63 0.00 0.00 4.17
4984 7801 3.004752 AGGTTTCCATATCAGTGCACC 57.995 47.619 14.63 0.00 0.00 5.01
4985 7802 4.737054 CAAAGGTTTCCATATCAGTGCAC 58.263 43.478 9.40 9.40 0.00 4.57
4986 7803 3.193267 GCAAAGGTTTCCATATCAGTGCA 59.807 43.478 0.00 0.00 0.00 4.57
4987 7804 3.429410 GGCAAAGGTTTCCATATCAGTGC 60.429 47.826 0.00 0.00 0.00 4.40
4988 7805 4.019174 AGGCAAAGGTTTCCATATCAGTG 58.981 43.478 0.00 0.00 0.00 3.66
4989 7806 4.019174 CAGGCAAAGGTTTCCATATCAGT 58.981 43.478 0.00 0.00 0.00 3.41
4990 7807 4.272489 TCAGGCAAAGGTTTCCATATCAG 58.728 43.478 0.00 0.00 0.00 2.90
4991 7808 4.314522 TCAGGCAAAGGTTTCCATATCA 57.685 40.909 0.00 0.00 0.00 2.15
4992 7809 4.500375 GCATCAGGCAAAGGTTTCCATATC 60.500 45.833 0.00 0.00 43.97 1.63
4993 7810 3.385755 GCATCAGGCAAAGGTTTCCATAT 59.614 43.478 0.00 0.00 43.97 1.78
4994 7811 2.760092 GCATCAGGCAAAGGTTTCCATA 59.240 45.455 0.00 0.00 43.97 2.74
4995 7812 1.551883 GCATCAGGCAAAGGTTTCCAT 59.448 47.619 0.00 0.00 43.97 3.41
4996 7813 0.968405 GCATCAGGCAAAGGTTTCCA 59.032 50.000 0.00 0.00 43.97 3.53
4997 7814 3.820595 GCATCAGGCAAAGGTTTCC 57.179 52.632 0.00 0.00 43.97 3.13
5007 7824 3.453070 GAGTCCCGAGGCATCAGGC 62.453 68.421 0.00 0.00 43.74 4.85
5008 7825 2.801631 GGAGTCCCGAGGCATCAGG 61.802 68.421 0.00 0.00 0.00 3.86
5009 7826 1.743321 GAGGAGTCCCGAGGCATCAG 61.743 65.000 5.25 0.00 37.58 2.90
5010 7827 1.758514 GAGGAGTCCCGAGGCATCA 60.759 63.158 5.25 0.00 37.58 3.07
5011 7828 2.851071 CGAGGAGTCCCGAGGCATC 61.851 68.421 5.25 0.00 37.58 3.91
5012 7829 2.835431 CGAGGAGTCCCGAGGCAT 60.835 66.667 5.25 0.00 37.58 4.40
5015 7832 4.824515 AGGCGAGGAGTCCCGAGG 62.825 72.222 20.17 3.60 37.58 4.63
5016 7833 3.522731 CAGGCGAGGAGTCCCGAG 61.523 72.222 20.17 7.79 37.58 4.63
5021 7838 4.443266 AAGCGCAGGCGAGGAGTC 62.443 66.667 18.96 0.00 46.35 3.36
5022 7839 4.749310 CAAGCGCAGGCGAGGAGT 62.749 66.667 18.96 0.00 46.35 3.85
5029 7846 1.986575 CTAAAGAGGCAAGCGCAGGC 61.987 60.000 11.47 14.73 41.24 4.85
5030 7847 1.986575 GCTAAAGAGGCAAGCGCAGG 61.987 60.000 11.47 1.05 41.24 4.85
5031 7848 1.300971 TGCTAAAGAGGCAAGCGCAG 61.301 55.000 11.47 2.01 41.24 5.18
5032 7849 1.302431 TGCTAAAGAGGCAAGCGCA 60.302 52.632 11.47 0.00 41.24 6.09
5033 7850 1.135523 GTGCTAAAGAGGCAAGCGC 59.864 57.895 0.00 0.00 41.54 5.92
5034 7851 0.955428 TGGTGCTAAAGAGGCAAGCG 60.955 55.000 0.00 0.00 41.54 4.68
5035 7852 1.247567 TTGGTGCTAAAGAGGCAAGC 58.752 50.000 0.00 0.00 41.54 4.01
5036 7853 3.149196 TCTTTGGTGCTAAAGAGGCAAG 58.851 45.455 6.63 0.00 40.66 4.01
5037 7854 3.222173 TCTTTGGTGCTAAAGAGGCAA 57.778 42.857 6.63 0.00 40.66 4.52
5038 7855 2.949177 TCTTTGGTGCTAAAGAGGCA 57.051 45.000 6.63 0.00 40.66 4.75
5042 7859 4.821805 CAGTTTCCTCTTTGGTGCTAAAGA 59.178 41.667 9.72 9.72 42.63 2.52
5043 7860 4.022849 CCAGTTTCCTCTTTGGTGCTAAAG 60.023 45.833 2.21 2.21 38.67 1.85
5044 7861 3.888930 CCAGTTTCCTCTTTGGTGCTAAA 59.111 43.478 0.00 0.00 37.07 1.85
5045 7862 3.117663 ACCAGTTTCCTCTTTGGTGCTAA 60.118 43.478 0.00 0.00 42.12 3.09
5046 7863 2.441750 ACCAGTTTCCTCTTTGGTGCTA 59.558 45.455 0.00 0.00 42.12 3.49
5047 7864 1.215423 ACCAGTTTCCTCTTTGGTGCT 59.785 47.619 0.00 0.00 42.12 4.40
5048 7865 1.692411 ACCAGTTTCCTCTTTGGTGC 58.308 50.000 0.00 0.00 42.12 5.01
5049 7866 3.146847 GGTACCAGTTTCCTCTTTGGTG 58.853 50.000 7.15 0.00 43.44 4.17
5050 7867 3.503800 GGTACCAGTTTCCTCTTTGGT 57.496 47.619 7.15 0.33 45.42 3.67
5066 7883 4.217159 CCAGCGGGCGTAGGGTAC 62.217 72.222 0.00 0.00 0.00 3.34
5091 7908 2.885644 CATGACGACCGAAGCCCG 60.886 66.667 0.00 0.00 38.18 6.13
5092 7909 2.511600 CCATGACGACCGAAGCCC 60.512 66.667 0.00 0.00 0.00 5.19
5093 7910 3.195698 GCCATGACGACCGAAGCC 61.196 66.667 0.00 0.00 0.00 4.35
5094 7911 2.125512 AGCCATGACGACCGAAGC 60.126 61.111 0.00 0.00 0.00 3.86
5095 7912 1.078759 GTGAGCCATGACGACCGAAG 61.079 60.000 0.00 0.00 0.00 3.79
5096 7913 1.080093 GTGAGCCATGACGACCGAA 60.080 57.895 0.00 0.00 0.00 4.30
5097 7914 2.571757 GTGAGCCATGACGACCGA 59.428 61.111 0.00 0.00 0.00 4.69
5098 7915 2.880879 CGTGAGCCATGACGACCG 60.881 66.667 0.00 0.00 37.81 4.79
5099 7916 1.805945 GACGTGAGCCATGACGACC 60.806 63.158 11.17 0.29 38.94 4.79
5100 7917 0.458543 ATGACGTGAGCCATGACGAC 60.459 55.000 11.17 6.02 38.94 4.34
5101 7918 0.458370 CATGACGTGAGCCATGACGA 60.458 55.000 11.17 0.00 41.88 4.20
5102 7919 0.737367 ACATGACGTGAGCCATGACG 60.737 55.000 18.62 0.00 41.88 4.35
5103 7920 3.143675 ACATGACGTGAGCCATGAC 57.856 52.632 18.62 0.00 41.88 3.06
5113 7930 1.733041 CGCGAGGTTCACATGACGT 60.733 57.895 0.00 0.00 0.00 4.34
5114 7931 1.406219 CTCGCGAGGTTCACATGACG 61.406 60.000 28.40 0.00 0.00 4.35
5115 7932 1.078759 CCTCGCGAGGTTCACATGAC 61.079 60.000 40.77 0.00 43.61 3.06
5116 7933 1.215382 CCTCGCGAGGTTCACATGA 59.785 57.895 40.77 0.75 43.61 3.07
5117 7934 3.786101 CCTCGCGAGGTTCACATG 58.214 61.111 40.77 17.62 43.61 3.21
5134 7951 2.180159 TAGTTCAAGGCGGAGGGCAC 62.180 60.000 0.00 0.00 46.16 5.01
5135 7952 1.271840 ATAGTTCAAGGCGGAGGGCA 61.272 55.000 0.00 0.00 46.16 5.36
5136 7953 0.533085 GATAGTTCAAGGCGGAGGGC 60.533 60.000 0.00 0.00 42.51 5.19
5137 7954 0.106894 GGATAGTTCAAGGCGGAGGG 59.893 60.000 0.00 0.00 0.00 4.30
5138 7955 0.249489 CGGATAGTTCAAGGCGGAGG 60.249 60.000 0.00 0.00 0.00 4.30
5139 7956 0.876342 GCGGATAGTTCAAGGCGGAG 60.876 60.000 0.00 0.00 0.00 4.63
5140 7957 1.143183 GCGGATAGTTCAAGGCGGA 59.857 57.895 0.00 0.00 0.00 5.54
5141 7958 0.876342 GAGCGGATAGTTCAAGGCGG 60.876 60.000 0.00 0.00 0.00 6.13
5142 7959 0.876342 GGAGCGGATAGTTCAAGGCG 60.876 60.000 0.00 0.00 0.00 5.52
5143 7960 0.466124 AGGAGCGGATAGTTCAAGGC 59.534 55.000 0.00 0.00 0.00 4.35
5144 7961 1.269309 CGAGGAGCGGATAGTTCAAGG 60.269 57.143 0.00 0.00 36.03 3.61
5145 7962 1.866063 GCGAGGAGCGGATAGTTCAAG 60.866 57.143 0.00 0.00 41.29 3.02
5146 7963 0.102481 GCGAGGAGCGGATAGTTCAA 59.898 55.000 0.00 0.00 41.29 2.69
5147 7964 1.734137 GCGAGGAGCGGATAGTTCA 59.266 57.895 0.00 0.00 41.29 3.18
5148 7965 4.637873 GCGAGGAGCGGATAGTTC 57.362 61.111 0.00 0.00 41.29 3.01
5159 7976 4.815108 TAGGCTGGCTCGCGAGGA 62.815 66.667 35.10 1.27 0.00 3.71
5160 7977 4.277593 CTAGGCTGGCTCGCGAGG 62.278 72.222 35.10 20.84 0.00 4.63
5161 7978 3.522731 ACTAGGCTGGCTCGCGAG 61.523 66.667 31.37 31.37 0.00 5.03
5162 7979 3.826754 CACTAGGCTGGCTCGCGA 61.827 66.667 9.26 9.26 0.00 5.87
5163 7980 3.764810 CTCACTAGGCTGGCTCGCG 62.765 68.421 7.13 0.00 0.00 5.87
5164 7981 2.105930 CTCACTAGGCTGGCTCGC 59.894 66.667 7.13 0.00 0.00 5.03
5165 7982 2.811101 CCTCACTAGGCTGGCTCG 59.189 66.667 7.13 3.70 35.64 5.03
5173 7990 0.691078 TTAGGGGCAGCCTCACTAGG 60.691 60.000 15.81 0.00 46.76 3.02
5174 7991 0.755686 CTTAGGGGCAGCCTCACTAG 59.244 60.000 15.81 3.31 0.00 2.57
5175 7992 0.691078 CCTTAGGGGCAGCCTCACTA 60.691 60.000 15.81 10.33 0.00 2.74
5176 7993 1.997874 CCTTAGGGGCAGCCTCACT 60.998 63.158 15.81 11.38 0.00 3.41
5177 7994 1.977293 CTCCTTAGGGGCAGCCTCAC 61.977 65.000 15.81 3.45 34.39 3.51
5178 7995 1.690633 CTCCTTAGGGGCAGCCTCA 60.691 63.158 15.81 0.00 34.39 3.86
5179 7996 2.447714 CCTCCTTAGGGGCAGCCTC 61.448 68.421 12.43 7.53 39.48 4.70
5180 7997 2.367512 CCTCCTTAGGGGCAGCCT 60.368 66.667 12.43 0.00 39.48 4.58
5186 8003 1.265454 ACGCAAGACCTCCTTAGGGG 61.265 60.000 0.00 0.00 44.76 4.79
5187 8004 0.175989 GACGCAAGACCTCCTTAGGG 59.824 60.000 0.00 0.00 44.76 3.53
5188 8005 0.179134 CGACGCAAGACCTCCTTAGG 60.179 60.000 0.00 0.00 45.58 2.69
5189 8006 0.526662 ACGACGCAAGACCTCCTTAG 59.473 55.000 0.00 0.00 43.62 2.18
5190 8007 0.524862 GACGACGCAAGACCTCCTTA 59.475 55.000 0.00 0.00 43.62 2.69
5191 8008 1.289380 GACGACGCAAGACCTCCTT 59.711 57.895 0.00 0.00 43.62 3.36
5192 8009 2.637383 GGACGACGCAAGACCTCCT 61.637 63.158 0.00 0.00 43.62 3.69
5193 8010 2.126031 GGACGACGCAAGACCTCC 60.126 66.667 0.00 0.00 43.62 4.30
5194 8011 2.504244 CGGACGACGCAAGACCTC 60.504 66.667 0.00 0.00 43.62 3.85
5230 8047 1.153939 CACTGAAGACCCTCGCGAG 60.154 63.158 29.06 29.06 0.00 5.03
5231 8048 2.636412 CCACTGAAGACCCTCGCGA 61.636 63.158 9.26 9.26 0.00 5.87
5232 8049 2.125912 CCACTGAAGACCCTCGCG 60.126 66.667 0.00 0.00 0.00 5.87
5233 8050 0.250338 AAACCACTGAAGACCCTCGC 60.250 55.000 0.00 0.00 0.00 5.03
5234 8051 1.202651 ACAAACCACTGAAGACCCTCG 60.203 52.381 0.00 0.00 0.00 4.63
5235 8052 2.618709 CAACAAACCACTGAAGACCCTC 59.381 50.000 0.00 0.00 0.00 4.30
5236 8053 2.654863 CAACAAACCACTGAAGACCCT 58.345 47.619 0.00 0.00 0.00 4.34
5237 8054 1.681264 CCAACAAACCACTGAAGACCC 59.319 52.381 0.00 0.00 0.00 4.46
5238 8055 2.099098 CACCAACAAACCACTGAAGACC 59.901 50.000 0.00 0.00 0.00 3.85
5239 8056 3.013921 TCACCAACAAACCACTGAAGAC 58.986 45.455 0.00 0.00 0.00 3.01
5240 8057 3.358111 TCACCAACAAACCACTGAAGA 57.642 42.857 0.00 0.00 0.00 2.87
5241 8058 3.694072 TCTTCACCAACAAACCACTGAAG 59.306 43.478 0.00 0.00 37.18 3.02
5242 8059 3.691575 TCTTCACCAACAAACCACTGAA 58.308 40.909 0.00 0.00 0.00 3.02
5243 8060 3.358111 TCTTCACCAACAAACCACTGA 57.642 42.857 0.00 0.00 0.00 3.41
5244 8061 3.243501 CCATCTTCACCAACAAACCACTG 60.244 47.826 0.00 0.00 0.00 3.66
5245 8062 2.958355 CCATCTTCACCAACAAACCACT 59.042 45.455 0.00 0.00 0.00 4.00
5246 8063 2.035832 CCCATCTTCACCAACAAACCAC 59.964 50.000 0.00 0.00 0.00 4.16
5247 8064 2.315176 CCCATCTTCACCAACAAACCA 58.685 47.619 0.00 0.00 0.00 3.67
5248 8065 1.000843 GCCCATCTTCACCAACAAACC 59.999 52.381 0.00 0.00 0.00 3.27
5249 8066 1.000843 GGCCCATCTTCACCAACAAAC 59.999 52.381 0.00 0.00 0.00 2.93
5250 8067 1.337118 GGCCCATCTTCACCAACAAA 58.663 50.000 0.00 0.00 0.00 2.83
5251 8068 0.893270 CGGCCCATCTTCACCAACAA 60.893 55.000 0.00 0.00 0.00 2.83
5252 8069 1.303236 CGGCCCATCTTCACCAACA 60.303 57.895 0.00 0.00 0.00 3.33
5253 8070 0.035820 TACGGCCCATCTTCACCAAC 60.036 55.000 0.00 0.00 0.00 3.77
5254 8071 0.035820 GTACGGCCCATCTTCACCAA 60.036 55.000 0.00 0.00 0.00 3.67
5255 8072 1.600107 GTACGGCCCATCTTCACCA 59.400 57.895 0.00 0.00 0.00 4.17
5256 8073 1.153229 GGTACGGCCCATCTTCACC 60.153 63.158 0.00 0.00 0.00 4.02
5257 8074 0.462047 CTGGTACGGCCCATCTTCAC 60.462 60.000 0.00 0.00 36.04 3.18
5258 8075 1.622607 CCTGGTACGGCCCATCTTCA 61.623 60.000 0.00 0.00 36.04 3.02
5259 8076 1.146263 CCTGGTACGGCCCATCTTC 59.854 63.158 0.00 0.00 36.04 2.87
5260 8077 3.043999 GCCTGGTACGGCCCATCTT 62.044 63.158 0.00 0.00 40.94 2.40
5261 8078 3.480133 GCCTGGTACGGCCCATCT 61.480 66.667 0.00 0.00 40.94 2.90
5268 8085 4.388499 AGCAACGGCCTGGTACGG 62.388 66.667 15.29 2.50 42.56 4.02
5269 8086 3.118454 CAGCAACGGCCTGGTACG 61.118 66.667 0.00 10.58 42.56 3.67
5270 8087 2.746277 CCAGCAACGGCCTGGTAC 60.746 66.667 0.00 0.00 42.56 3.34
5271 8088 2.925706 TCCAGCAACGGCCTGGTA 60.926 61.111 15.08 3.45 42.56 3.25
5272 8089 4.335647 CTCCAGCAACGGCCTGGT 62.336 66.667 15.08 0.00 42.56 4.00
5281 8098 2.874648 CTATGGCGTGGCTCCAGCAA 62.875 60.000 0.03 0.00 44.36 3.91
5282 8099 3.390183 CTATGGCGTGGCTCCAGCA 62.390 63.158 0.03 0.00 44.36 4.41
5283 8100 2.590007 CTATGGCGTGGCTCCAGC 60.590 66.667 0.00 0.00 36.98 4.85
5284 8101 2.109799 CCTATGGCGTGGCTCCAG 59.890 66.667 0.00 0.00 36.98 3.86
5285 8102 2.687200 ACCTATGGCGTGGCTCCA 60.687 61.111 0.00 0.00 38.09 3.86
5286 8103 2.109181 GACCTATGGCGTGGCTCC 59.891 66.667 0.00 0.00 0.00 4.70
5287 8104 2.279517 CGACCTATGGCGTGGCTC 60.280 66.667 0.00 0.00 0.00 4.70
5288 8105 4.530857 GCGACCTATGGCGTGGCT 62.531 66.667 0.00 0.00 32.79 4.75
5289 8106 4.830765 TGCGACCTATGGCGTGGC 62.831 66.667 0.00 0.00 35.72 5.01
5290 8107 2.890474 GTGCGACCTATGGCGTGG 60.890 66.667 0.00 0.00 30.86 4.94
5291 8108 3.254654 CGTGCGACCTATGGCGTG 61.255 66.667 0.00 0.00 30.86 5.34
5294 8111 3.264897 CTGCGTGCGACCTATGGC 61.265 66.667 0.00 0.00 0.00 4.40
5295 8112 2.586079 CCTGCGTGCGACCTATGG 60.586 66.667 0.00 0.00 0.00 2.74
5296 8113 3.264897 GCCTGCGTGCGACCTATG 61.265 66.667 0.00 0.00 0.00 2.23
5297 8114 3.309436 TTGCCTGCGTGCGACCTAT 62.309 57.895 0.00 0.00 0.00 2.57
5298 8115 3.932580 CTTGCCTGCGTGCGACCTA 62.933 63.158 0.00 0.00 0.00 3.08
5301 8118 4.077188 GACTTGCCTGCGTGCGAC 62.077 66.667 0.00 0.00 0.00 5.19
5302 8119 4.299547 AGACTTGCCTGCGTGCGA 62.300 61.111 0.00 0.00 0.00 5.10
5303 8120 4.081030 CAGACTTGCCTGCGTGCG 62.081 66.667 0.00 0.00 0.00 5.34
5304 8121 3.730761 CCAGACTTGCCTGCGTGC 61.731 66.667 0.00 0.00 32.97 5.34
5305 8122 3.052082 CCCAGACTTGCCTGCGTG 61.052 66.667 0.00 0.00 32.97 5.34
5306 8123 4.335647 CCCCAGACTTGCCTGCGT 62.336 66.667 0.00 0.00 32.97 5.24
5307 8124 4.020617 TCCCCAGACTTGCCTGCG 62.021 66.667 0.00 0.00 32.97 5.18
5308 8125 2.360475 GTCCCCAGACTTGCCTGC 60.360 66.667 0.00 0.00 40.10 4.85
5309 8126 2.352805 GGTCCCCAGACTTGCCTG 59.647 66.667 0.00 0.00 43.05 4.85
5310 8127 2.936032 GGGTCCCCAGACTTGCCT 60.936 66.667 0.00 0.00 43.05 4.75
5311 8128 4.048470 GGGGTCCCCAGACTTGCC 62.048 72.222 23.53 0.00 44.65 4.52
5330 8147 1.662446 TTGTCGGCGTTCTCGGAAC 60.662 57.895 6.85 6.68 37.56 3.62
5331 8148 2.729455 TTGTCGGCGTTCTCGGAA 59.271 55.556 6.85 0.00 37.56 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.