Multiple sequence alignment - TraesCS4D01G242300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G242300 chr4D 100.000 3236 0 0 1 3236 405036980 405040215 0.000000e+00 5976
1 TraesCS4D01G242300 chr4D 99.875 803 1 0 2434 3236 405046447 405047249 0.000000e+00 1478
2 TraesCS4D01G242300 chr6D 97.880 1840 37 2 596 2434 447453221 447451383 0.000000e+00 3181
3 TraesCS4D01G242300 chr6D 95.817 1841 74 3 595 2434 16784161 16782323 0.000000e+00 2970
4 TraesCS4D01G242300 chr6D 99.875 803 1 0 2434 3236 326452465 326453267 0.000000e+00 1478
5 TraesCS4D01G242300 chr3D 95.707 1840 77 2 596 2434 17660327 17662165 0.000000e+00 2959
6 TraesCS4D01G242300 chr3D 85.573 1823 247 15 616 2433 608155500 608157311 0.000000e+00 1895
7 TraesCS4D01G242300 chr3D 99.628 807 3 0 2430 3236 585866969 585866163 0.000000e+00 1474
8 TraesCS4D01G242300 chr2D 95.217 1840 86 2 596 2434 35006461 35008299 0.000000e+00 2909
9 TraesCS4D01G242300 chr2D 91.363 1841 150 6 595 2433 635880619 635878786 0.000000e+00 2510
10 TraesCS4D01G242300 chr2D 99.752 807 2 0 2430 3236 641237891 641238697 0.000000e+00 1480
11 TraesCS4D01G242300 chr2D 99.875 803 1 0 2434 3236 114625021 114624219 0.000000e+00 1478
12 TraesCS4D01G242300 chr2A 84.703 1850 259 18 596 2433 238527195 238525358 0.000000e+00 1827
13 TraesCS4D01G242300 chr3B 88.797 1455 160 3 596 2049 4623091 4621639 0.000000e+00 1781
14 TraesCS4D01G242300 chr1D 83.938 1818 269 20 629 2434 364144699 364142893 0.000000e+00 1718
15 TraesCS4D01G242300 chr1D 99.751 803 2 0 2434 3236 350254218 350253416 0.000000e+00 1472
16 TraesCS4D01G242300 chr5D 99.630 810 2 1 2428 3236 191224313 191225122 0.000000e+00 1478
17 TraesCS4D01G242300 chr5D 99.628 807 3 0 2430 3236 431178503 431177697 0.000000e+00 1474
18 TraesCS4D01G242300 chr5D 99.383 811 4 1 2426 3236 120844672 120845481 0.000000e+00 1469
19 TraesCS4D01G242300 chr4B 85.231 325 26 10 53 374 502964725 502965030 6.740000e-82 315
20 TraesCS4D01G242300 chr4A 89.510 143 10 4 253 393 62548763 62548902 3.320000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G242300 chr4D 405036980 405040215 3235 False 5976 5976 100.000 1 3236 1 chr4D.!!$F1 3235
1 TraesCS4D01G242300 chr4D 405046447 405047249 802 False 1478 1478 99.875 2434 3236 1 chr4D.!!$F2 802
2 TraesCS4D01G242300 chr6D 447451383 447453221 1838 True 3181 3181 97.880 596 2434 1 chr6D.!!$R2 1838
3 TraesCS4D01G242300 chr6D 16782323 16784161 1838 True 2970 2970 95.817 595 2434 1 chr6D.!!$R1 1839
4 TraesCS4D01G242300 chr6D 326452465 326453267 802 False 1478 1478 99.875 2434 3236 1 chr6D.!!$F1 802
5 TraesCS4D01G242300 chr3D 17660327 17662165 1838 False 2959 2959 95.707 596 2434 1 chr3D.!!$F1 1838
6 TraesCS4D01G242300 chr3D 608155500 608157311 1811 False 1895 1895 85.573 616 2433 1 chr3D.!!$F2 1817
7 TraesCS4D01G242300 chr3D 585866163 585866969 806 True 1474 1474 99.628 2430 3236 1 chr3D.!!$R1 806
8 TraesCS4D01G242300 chr2D 35006461 35008299 1838 False 2909 2909 95.217 596 2434 1 chr2D.!!$F1 1838
9 TraesCS4D01G242300 chr2D 635878786 635880619 1833 True 2510 2510 91.363 595 2433 1 chr2D.!!$R2 1838
10 TraesCS4D01G242300 chr2D 641237891 641238697 806 False 1480 1480 99.752 2430 3236 1 chr2D.!!$F2 806
11 TraesCS4D01G242300 chr2D 114624219 114625021 802 True 1478 1478 99.875 2434 3236 1 chr2D.!!$R1 802
12 TraesCS4D01G242300 chr2A 238525358 238527195 1837 True 1827 1827 84.703 596 2433 1 chr2A.!!$R1 1837
13 TraesCS4D01G242300 chr3B 4621639 4623091 1452 True 1781 1781 88.797 596 2049 1 chr3B.!!$R1 1453
14 TraesCS4D01G242300 chr1D 364142893 364144699 1806 True 1718 1718 83.938 629 2434 1 chr1D.!!$R2 1805
15 TraesCS4D01G242300 chr1D 350253416 350254218 802 True 1472 1472 99.751 2434 3236 1 chr1D.!!$R1 802
16 TraesCS4D01G242300 chr5D 191224313 191225122 809 False 1478 1478 99.630 2428 3236 1 chr5D.!!$F2 808
17 TraesCS4D01G242300 chr5D 431177697 431178503 806 True 1474 1474 99.628 2430 3236 1 chr5D.!!$R1 806
18 TraesCS4D01G242300 chr5D 120844672 120845481 809 False 1469 1469 99.383 2426 3236 1 chr5D.!!$F1 810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 390 0.036732 TCGACAGAATTGCCTGCCTT 59.963 50.0 0.0 0.0 37.68 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2313 2320 1.142748 GGACATGAGCACCTCCTCG 59.857 63.158 0.0 0.0 34.56 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.505982 GCTAAGCTGGCGGATGGA 59.494 61.111 0.00 0.00 0.00 3.41
19 20 1.153168 GCTAAGCTGGCGGATGGAA 60.153 57.895 0.00 0.00 0.00 3.53
20 21 0.536006 GCTAAGCTGGCGGATGGAAT 60.536 55.000 0.00 0.00 0.00 3.01
21 22 1.972872 CTAAGCTGGCGGATGGAATT 58.027 50.000 0.00 0.00 0.00 2.17
22 23 2.301346 CTAAGCTGGCGGATGGAATTT 58.699 47.619 0.00 0.00 0.00 1.82
23 24 2.435372 AAGCTGGCGGATGGAATTTA 57.565 45.000 0.00 0.00 0.00 1.40
24 25 2.664402 AGCTGGCGGATGGAATTTAT 57.336 45.000 0.00 0.00 0.00 1.40
25 26 2.949447 AGCTGGCGGATGGAATTTATT 58.051 42.857 0.00 0.00 0.00 1.40
26 27 2.624838 AGCTGGCGGATGGAATTTATTG 59.375 45.455 0.00 0.00 0.00 1.90
27 28 2.863704 GCTGGCGGATGGAATTTATTGC 60.864 50.000 0.00 0.00 0.00 3.56
28 29 2.624838 CTGGCGGATGGAATTTATTGCT 59.375 45.455 0.00 0.00 0.00 3.91
29 30 2.622942 TGGCGGATGGAATTTATTGCTC 59.377 45.455 0.00 0.00 0.00 4.26
30 31 2.029918 GGCGGATGGAATTTATTGCTCC 60.030 50.000 0.00 0.00 0.00 4.70
31 32 2.887152 GCGGATGGAATTTATTGCTCCT 59.113 45.455 9.17 0.00 0.00 3.69
32 33 3.319122 GCGGATGGAATTTATTGCTCCTT 59.681 43.478 9.17 0.00 0.00 3.36
33 34 4.202151 GCGGATGGAATTTATTGCTCCTTT 60.202 41.667 9.17 0.00 0.00 3.11
34 35 5.682212 GCGGATGGAATTTATTGCTCCTTTT 60.682 40.000 9.17 0.00 0.00 2.27
35 36 6.340522 CGGATGGAATTTATTGCTCCTTTTT 58.659 36.000 9.17 0.00 0.00 1.94
59 60 5.363979 TTTTTGCGGGGAAATTTTATTGC 57.636 34.783 0.00 0.00 0.00 3.56
60 61 3.971245 TTGCGGGGAAATTTTATTGCT 57.029 38.095 0.00 0.00 0.00 3.91
61 62 3.518634 TGCGGGGAAATTTTATTGCTC 57.481 42.857 0.00 0.00 0.00 4.26
62 63 2.167487 TGCGGGGAAATTTTATTGCTCC 59.833 45.455 0.00 0.00 0.00 4.70
63 64 2.167487 GCGGGGAAATTTTATTGCTCCA 59.833 45.455 0.00 0.00 0.00 3.86
64 65 3.181466 GCGGGGAAATTTTATTGCTCCAT 60.181 43.478 0.00 0.00 0.00 3.41
65 66 4.620982 CGGGGAAATTTTATTGCTCCATC 58.379 43.478 0.00 0.00 0.00 3.51
66 67 4.501400 CGGGGAAATTTTATTGCTCCATCC 60.501 45.833 0.00 0.00 0.00 3.51
67 68 4.501400 GGGGAAATTTTATTGCTCCATCCG 60.501 45.833 0.00 0.00 0.00 4.18
68 69 4.099419 GGGAAATTTTATTGCTCCATCCGT 59.901 41.667 0.00 0.00 0.00 4.69
69 70 5.281727 GGAAATTTTATTGCTCCATCCGTC 58.718 41.667 0.00 0.00 0.00 4.79
70 71 5.163561 GGAAATTTTATTGCTCCATCCGTCA 60.164 40.000 0.00 0.00 0.00 4.35
71 72 6.461509 GGAAATTTTATTGCTCCATCCGTCAT 60.462 38.462 0.00 0.00 0.00 3.06
72 73 5.695851 ATTTTATTGCTCCATCCGTCATC 57.304 39.130 0.00 0.00 0.00 2.92
73 74 2.438868 TATTGCTCCATCCGTCATCG 57.561 50.000 0.00 0.00 0.00 3.84
83 84 4.598257 CGTCATCGGTTCAGGCTT 57.402 55.556 0.00 0.00 0.00 4.35
84 85 2.373938 CGTCATCGGTTCAGGCTTC 58.626 57.895 0.00 0.00 0.00 3.86
85 86 1.413767 CGTCATCGGTTCAGGCTTCG 61.414 60.000 0.00 0.00 0.00 3.79
86 87 0.389948 GTCATCGGTTCAGGCTTCGT 60.390 55.000 0.00 0.00 0.00 3.85
87 88 0.108804 TCATCGGTTCAGGCTTCGTC 60.109 55.000 0.00 0.00 0.00 4.20
88 89 0.108615 CATCGGTTCAGGCTTCGTCT 60.109 55.000 0.00 0.00 0.00 4.18
89 90 0.173708 ATCGGTTCAGGCTTCGTCTC 59.826 55.000 0.00 0.00 0.00 3.36
90 91 1.176619 TCGGTTCAGGCTTCGTCTCA 61.177 55.000 0.00 0.00 0.00 3.27
91 92 0.734253 CGGTTCAGGCTTCGTCTCAG 60.734 60.000 0.00 0.00 0.00 3.35
92 93 0.603569 GGTTCAGGCTTCGTCTCAGA 59.396 55.000 0.00 0.00 0.00 3.27
93 94 1.670380 GGTTCAGGCTTCGTCTCAGAC 60.670 57.143 0.00 0.00 0.00 3.51
94 95 1.271102 GTTCAGGCTTCGTCTCAGACT 59.729 52.381 2.61 0.00 0.00 3.24
95 96 1.621992 TCAGGCTTCGTCTCAGACTT 58.378 50.000 2.61 0.00 0.00 3.01
96 97 1.542030 TCAGGCTTCGTCTCAGACTTC 59.458 52.381 2.61 0.00 0.00 3.01
97 98 1.270826 CAGGCTTCGTCTCAGACTTCA 59.729 52.381 2.61 0.00 0.00 3.02
98 99 1.543802 AGGCTTCGTCTCAGACTTCAG 59.456 52.381 2.61 0.00 0.00 3.02
99 100 1.542030 GGCTTCGTCTCAGACTTCAGA 59.458 52.381 2.61 0.00 0.00 3.27
100 101 2.591133 GCTTCGTCTCAGACTTCAGAC 58.409 52.381 2.61 2.30 36.45 3.51
101 102 2.030717 GCTTCGTCTCAGACTTCAGACA 60.031 50.000 2.61 0.00 39.29 3.41
102 103 3.560503 CTTCGTCTCAGACTTCAGACAC 58.439 50.000 2.61 0.00 39.29 3.67
103 104 1.531578 TCGTCTCAGACTTCAGACACG 59.468 52.381 2.61 0.00 39.29 4.49
104 105 1.264557 CGTCTCAGACTTCAGACACGT 59.735 52.381 2.61 0.00 39.29 4.49
105 106 2.479275 CGTCTCAGACTTCAGACACGTA 59.521 50.000 2.61 0.00 39.29 3.57
106 107 3.664798 CGTCTCAGACTTCAGACACGTAC 60.665 52.174 2.61 0.00 39.29 3.67
107 108 2.479275 TCTCAGACTTCAGACACGTACG 59.521 50.000 15.01 15.01 0.00 3.67
108 109 2.479275 CTCAGACTTCAGACACGTACGA 59.521 50.000 24.41 0.00 0.00 3.43
109 110 2.479275 TCAGACTTCAGACACGTACGAG 59.521 50.000 24.41 17.53 0.00 4.18
110 111 2.223611 CAGACTTCAGACACGTACGAGT 59.776 50.000 24.41 21.21 0.00 4.18
111 112 3.431233 CAGACTTCAGACACGTACGAGTA 59.569 47.826 24.41 2.07 0.00 2.59
112 113 3.679025 AGACTTCAGACACGTACGAGTAG 59.321 47.826 24.41 16.06 0.00 2.57
113 114 2.740981 ACTTCAGACACGTACGAGTAGG 59.259 50.000 24.41 15.14 0.00 3.18
114 115 1.730501 TCAGACACGTACGAGTAGGG 58.269 55.000 24.41 12.68 0.00 3.53
115 116 0.098376 CAGACACGTACGAGTAGGGC 59.902 60.000 24.41 8.19 0.00 5.19
116 117 1.028868 AGACACGTACGAGTAGGGCC 61.029 60.000 24.41 7.81 0.00 5.80
117 118 2.315038 GACACGTACGAGTAGGGCCG 62.315 65.000 24.41 1.05 0.00 6.13
118 119 2.108514 CACGTACGAGTAGGGCCGA 61.109 63.158 24.41 0.00 0.00 5.54
119 120 1.153086 ACGTACGAGTAGGGCCGAT 60.153 57.895 24.41 0.00 0.00 4.18
120 121 1.162800 ACGTACGAGTAGGGCCGATC 61.163 60.000 24.41 0.00 0.00 3.69
121 122 0.883814 CGTACGAGTAGGGCCGATCT 60.884 60.000 10.44 0.00 0.00 2.75
122 123 0.873721 GTACGAGTAGGGCCGATCTC 59.126 60.000 13.02 13.02 0.00 2.75
123 124 2.947542 CGAGTAGGGCCGATCTCG 59.052 66.667 24.23 24.23 42.36 4.04
124 125 2.646143 GAGTAGGGCCGATCTCGC 59.354 66.667 0.00 0.00 38.18 5.03
125 126 2.913060 AGTAGGGCCGATCTCGCC 60.913 66.667 11.32 11.32 38.18 5.54
126 127 2.913060 GTAGGGCCGATCTCGCCT 60.913 66.667 17.40 8.02 36.20 5.52
127 128 2.597805 TAGGGCCGATCTCGCCTC 60.598 66.667 17.40 9.69 34.50 4.70
131 132 4.992294 GCCGATCTCGCCTCGCTC 62.992 72.222 0.00 0.00 38.18 5.03
132 133 4.674904 CCGATCTCGCCTCGCTCG 62.675 72.222 0.00 0.00 38.18 5.03
134 135 4.992294 GATCTCGCCTCGCTCGCC 62.992 72.222 0.00 0.00 0.00 5.54
151 152 4.653888 CCCGGCCCTTTGTTCGGT 62.654 66.667 0.00 0.00 40.78 4.69
152 153 3.053896 CCGGCCCTTTGTTCGGTC 61.054 66.667 0.00 0.00 37.92 4.79
153 154 3.053896 CGGCCCTTTGTTCGGTCC 61.054 66.667 0.00 0.00 0.00 4.46
154 155 2.434774 GGCCCTTTGTTCGGTCCT 59.565 61.111 0.00 0.00 0.00 3.85
155 156 1.674651 GGCCCTTTGTTCGGTCCTC 60.675 63.158 0.00 0.00 0.00 3.71
156 157 2.033194 GCCCTTTGTTCGGTCCTCG 61.033 63.158 0.00 0.00 40.90 4.63
157 158 2.033194 CCCTTTGTTCGGTCCTCGC 61.033 63.158 0.00 0.00 39.05 5.03
158 159 1.004918 CCTTTGTTCGGTCCTCGCT 60.005 57.895 0.00 0.00 39.05 4.93
159 160 1.014564 CCTTTGTTCGGTCCTCGCTC 61.015 60.000 0.00 0.00 39.05 5.03
160 161 0.038159 CTTTGTTCGGTCCTCGCTCT 60.038 55.000 0.00 0.00 39.05 4.09
161 162 0.391597 TTTGTTCGGTCCTCGCTCTT 59.608 50.000 0.00 0.00 39.05 2.85
162 163 1.250328 TTGTTCGGTCCTCGCTCTTA 58.750 50.000 0.00 0.00 39.05 2.10
163 164 0.524862 TGTTCGGTCCTCGCTCTTAC 59.475 55.000 0.00 0.00 39.05 2.34
164 165 0.522915 GTTCGGTCCTCGCTCTTACG 60.523 60.000 0.00 0.00 39.05 3.18
165 166 0.674581 TTCGGTCCTCGCTCTTACGA 60.675 55.000 0.00 0.00 40.36 3.43
166 167 0.674581 TCGGTCCTCGCTCTTACGAA 60.675 55.000 0.00 0.00 42.39 3.85
167 168 0.169672 CGGTCCTCGCTCTTACGAAA 59.830 55.000 0.00 0.00 42.39 3.46
168 169 1.401931 CGGTCCTCGCTCTTACGAAAA 60.402 52.381 0.00 0.00 42.39 2.29
169 170 2.260481 GGTCCTCGCTCTTACGAAAAG 58.740 52.381 0.00 0.00 42.39 2.27
170 171 2.260481 GTCCTCGCTCTTACGAAAAGG 58.740 52.381 0.00 0.00 42.39 3.11
171 172 1.891150 TCCTCGCTCTTACGAAAAGGT 59.109 47.619 0.00 0.00 42.39 3.50
172 173 2.094854 TCCTCGCTCTTACGAAAAGGTC 60.095 50.000 0.00 0.00 42.39 3.85
173 174 2.094649 CCTCGCTCTTACGAAAAGGTCT 60.095 50.000 0.00 0.00 42.39 3.85
174 175 3.172824 CTCGCTCTTACGAAAAGGTCTC 58.827 50.000 0.00 0.00 42.39 3.36
175 176 2.094854 TCGCTCTTACGAAAAGGTCTCC 60.095 50.000 0.00 0.00 39.54 3.71
176 177 2.094649 CGCTCTTACGAAAAGGTCTCCT 60.095 50.000 0.00 0.00 31.85 3.69
177 178 3.614390 CGCTCTTACGAAAAGGTCTCCTT 60.614 47.826 0.00 0.00 39.63 3.36
178 179 3.680458 GCTCTTACGAAAAGGTCTCCTTG 59.320 47.826 1.62 0.00 43.92 3.61
179 180 4.799917 GCTCTTACGAAAAGGTCTCCTTGT 60.800 45.833 1.62 0.00 43.92 3.16
180 181 4.879598 TCTTACGAAAAGGTCTCCTTGTC 58.120 43.478 8.26 8.26 43.92 3.18
184 185 3.879932 GAAAAGGTCTCCTTGTCGTTG 57.120 47.619 1.62 0.00 43.92 4.10
185 186 1.594331 AAAGGTCTCCTTGTCGTTGC 58.406 50.000 1.62 0.00 43.92 4.17
186 187 0.600255 AAGGTCTCCTTGTCGTTGCG 60.600 55.000 0.00 0.00 42.96 4.85
187 188 2.668280 GGTCTCCTTGTCGTTGCGC 61.668 63.158 0.00 0.00 0.00 6.09
188 189 1.664965 GTCTCCTTGTCGTTGCGCT 60.665 57.895 9.73 0.00 0.00 5.92
189 190 1.372997 TCTCCTTGTCGTTGCGCTC 60.373 57.895 9.73 0.35 0.00 5.03
190 191 2.357034 TCCTTGTCGTTGCGCTCC 60.357 61.111 9.73 0.00 0.00 4.70
191 192 2.357517 CCTTGTCGTTGCGCTCCT 60.358 61.111 9.73 0.00 0.00 3.69
192 193 2.671177 CCTTGTCGTTGCGCTCCTG 61.671 63.158 9.73 0.00 0.00 3.86
193 194 1.956170 CTTGTCGTTGCGCTCCTGT 60.956 57.895 9.73 0.00 0.00 4.00
194 195 2.162921 CTTGTCGTTGCGCTCCTGTG 62.163 60.000 9.73 0.00 0.00 3.66
202 203 3.187211 GCGCTCCTGTGCTAGTATC 57.813 57.895 0.00 0.00 45.43 2.24
203 204 0.385751 GCGCTCCTGTGCTAGTATCA 59.614 55.000 0.00 0.00 45.43 2.15
204 205 1.202417 GCGCTCCTGTGCTAGTATCAA 60.202 52.381 0.00 0.00 45.43 2.57
205 206 2.546795 GCGCTCCTGTGCTAGTATCAAT 60.547 50.000 0.00 0.00 45.43 2.57
206 207 3.312828 CGCTCCTGTGCTAGTATCAATC 58.687 50.000 0.00 0.00 0.00 2.67
207 208 3.243535 CGCTCCTGTGCTAGTATCAATCA 60.244 47.826 0.00 0.00 0.00 2.57
208 209 4.305769 GCTCCTGTGCTAGTATCAATCAG 58.694 47.826 0.00 0.00 0.00 2.90
209 210 4.305769 CTCCTGTGCTAGTATCAATCAGC 58.694 47.826 0.00 0.00 34.56 4.26
210 211 3.070159 TCCTGTGCTAGTATCAATCAGCC 59.930 47.826 0.00 0.00 32.97 4.85
211 212 3.181462 CCTGTGCTAGTATCAATCAGCCA 60.181 47.826 0.00 0.00 32.97 4.75
212 213 4.056740 CTGTGCTAGTATCAATCAGCCAG 58.943 47.826 0.00 0.00 32.97 4.85
213 214 3.181462 TGTGCTAGTATCAATCAGCCAGG 60.181 47.826 0.00 0.00 32.97 4.45
214 215 2.224378 TGCTAGTATCAATCAGCCAGGC 60.224 50.000 1.84 1.84 32.97 4.85
215 216 2.681706 CTAGTATCAATCAGCCAGGCG 58.318 52.381 5.55 0.83 0.00 5.52
216 217 0.833287 AGTATCAATCAGCCAGGCGT 59.167 50.000 5.55 0.00 0.00 5.68
217 218 2.039418 AGTATCAATCAGCCAGGCGTA 58.961 47.619 5.55 0.00 0.00 4.42
218 219 2.634940 AGTATCAATCAGCCAGGCGTAT 59.365 45.455 5.55 0.07 0.00 3.06
219 220 1.888215 ATCAATCAGCCAGGCGTATG 58.112 50.000 5.55 4.51 0.00 2.39
220 221 0.541392 TCAATCAGCCAGGCGTATGT 59.459 50.000 5.55 0.00 0.00 2.29
221 222 1.760029 TCAATCAGCCAGGCGTATGTA 59.240 47.619 5.55 0.00 0.00 2.29
222 223 2.138320 CAATCAGCCAGGCGTATGTAG 58.862 52.381 5.55 0.00 0.00 2.74
223 224 1.704641 ATCAGCCAGGCGTATGTAGA 58.295 50.000 5.55 0.00 0.00 2.59
224 225 1.704641 TCAGCCAGGCGTATGTAGAT 58.295 50.000 5.55 0.00 0.00 1.98
225 226 1.341209 TCAGCCAGGCGTATGTAGATG 59.659 52.381 5.55 0.00 0.00 2.90
226 227 1.341209 CAGCCAGGCGTATGTAGATGA 59.659 52.381 5.55 0.00 0.00 2.92
227 228 1.615883 AGCCAGGCGTATGTAGATGAG 59.384 52.381 5.55 0.00 0.00 2.90
228 229 1.613925 GCCAGGCGTATGTAGATGAGA 59.386 52.381 0.00 0.00 0.00 3.27
229 230 2.232452 GCCAGGCGTATGTAGATGAGAT 59.768 50.000 0.00 0.00 0.00 2.75
230 231 3.674682 GCCAGGCGTATGTAGATGAGATC 60.675 52.174 0.00 0.00 0.00 2.75
231 232 3.119316 CCAGGCGTATGTAGATGAGATCC 60.119 52.174 0.00 0.00 0.00 3.36
232 233 3.507622 CAGGCGTATGTAGATGAGATCCA 59.492 47.826 0.00 0.00 0.00 3.41
233 234 4.159321 CAGGCGTATGTAGATGAGATCCAT 59.841 45.833 0.00 0.00 38.43 3.41
241 242 2.855209 GATGAGATCCATCCACTGGG 57.145 55.000 11.19 0.00 45.98 4.45
242 243 0.769873 ATGAGATCCATCCACTGGGC 59.230 55.000 0.00 0.00 45.98 5.36
243 244 1.348008 TGAGATCCATCCACTGGGCC 61.348 60.000 0.00 0.00 45.98 5.80
244 245 2.111878 GATCCATCCACTGGGCCG 59.888 66.667 0.00 0.00 45.98 6.13
245 246 3.482232 GATCCATCCACTGGGCCGG 62.482 68.421 11.83 11.83 45.98 6.13
249 250 4.815973 ATCCACTGGGCCGGGCTA 62.816 66.667 28.80 22.13 0.00 3.93
252 253 4.473520 CACTGGGCCGGGCTACAG 62.474 72.222 29.47 29.47 38.60 2.74
254 255 4.162690 CTGGGCCGGGCTACAGTC 62.163 72.222 28.80 10.51 32.30 3.51
255 256 4.715130 TGGGCCGGGCTACAGTCT 62.715 66.667 28.80 0.00 0.00 3.24
256 257 3.851128 GGGCCGGGCTACAGTCTC 61.851 72.222 28.80 4.21 0.00 3.36
257 258 2.760385 GGCCGGGCTACAGTCTCT 60.760 66.667 22.87 0.00 0.00 3.10
258 259 2.496817 GCCGGGCTACAGTCTCTG 59.503 66.667 12.87 0.00 37.52 3.35
259 260 2.496817 CCGGGCTACAGTCTCTGC 59.503 66.667 0.00 0.00 34.37 4.26
260 261 2.055042 CCGGGCTACAGTCTCTGCT 61.055 63.158 0.00 0.00 34.37 4.24
261 262 1.608717 CCGGGCTACAGTCTCTGCTT 61.609 60.000 0.00 0.00 34.37 3.91
262 263 0.247736 CGGGCTACAGTCTCTGCTTT 59.752 55.000 0.00 0.00 34.37 3.51
263 264 1.737363 CGGGCTACAGTCTCTGCTTTC 60.737 57.143 0.00 0.00 34.37 2.62
264 265 1.634702 GGCTACAGTCTCTGCTTTCG 58.365 55.000 0.00 0.00 34.37 3.46
265 266 1.067495 GGCTACAGTCTCTGCTTTCGT 60.067 52.381 0.00 0.00 34.37 3.85
266 267 2.610727 GGCTACAGTCTCTGCTTTCGTT 60.611 50.000 0.00 0.00 34.37 3.85
267 268 2.410053 GCTACAGTCTCTGCTTTCGTTG 59.590 50.000 0.00 0.00 34.37 4.10
268 269 1.221414 ACAGTCTCTGCTTTCGTTGC 58.779 50.000 0.00 0.00 34.37 4.17
269 270 0.514691 CAGTCTCTGCTTTCGTTGCC 59.485 55.000 0.00 0.00 0.00 4.52
270 271 0.106708 AGTCTCTGCTTTCGTTGCCA 59.893 50.000 0.00 0.00 0.00 4.92
271 272 1.160137 GTCTCTGCTTTCGTTGCCAT 58.840 50.000 0.00 0.00 0.00 4.40
272 273 1.129437 GTCTCTGCTTTCGTTGCCATC 59.871 52.381 0.00 0.00 0.00 3.51
273 274 1.002430 TCTCTGCTTTCGTTGCCATCT 59.998 47.619 0.00 0.00 0.00 2.90
274 275 1.808945 CTCTGCTTTCGTTGCCATCTT 59.191 47.619 0.00 0.00 0.00 2.40
275 276 2.227388 CTCTGCTTTCGTTGCCATCTTT 59.773 45.455 0.00 0.00 0.00 2.52
276 277 2.622942 TCTGCTTTCGTTGCCATCTTTT 59.377 40.909 0.00 0.00 0.00 2.27
277 278 2.727798 CTGCTTTCGTTGCCATCTTTTG 59.272 45.455 0.00 0.00 0.00 2.44
278 279 2.100584 TGCTTTCGTTGCCATCTTTTGT 59.899 40.909 0.00 0.00 0.00 2.83
279 280 2.726241 GCTTTCGTTGCCATCTTTTGTC 59.274 45.455 0.00 0.00 0.00 3.18
280 281 3.550842 GCTTTCGTTGCCATCTTTTGTCT 60.551 43.478 0.00 0.00 0.00 3.41
281 282 3.896648 TTCGTTGCCATCTTTTGTCTC 57.103 42.857 0.00 0.00 0.00 3.36
282 283 2.151202 TCGTTGCCATCTTTTGTCTCC 58.849 47.619 0.00 0.00 0.00 3.71
283 284 1.879380 CGTTGCCATCTTTTGTCTCCA 59.121 47.619 0.00 0.00 0.00 3.86
284 285 2.095567 CGTTGCCATCTTTTGTCTCCAG 60.096 50.000 0.00 0.00 0.00 3.86
285 286 2.205022 TGCCATCTTTTGTCTCCAGG 57.795 50.000 0.00 0.00 0.00 4.45
286 287 1.272092 TGCCATCTTTTGTCTCCAGGG 60.272 52.381 0.00 0.00 0.00 4.45
287 288 1.272147 GCCATCTTTTGTCTCCAGGGT 60.272 52.381 0.00 0.00 0.00 4.34
288 289 2.716217 CCATCTTTTGTCTCCAGGGTC 58.284 52.381 0.00 0.00 0.00 4.46
289 290 2.307098 CCATCTTTTGTCTCCAGGGTCT 59.693 50.000 0.00 0.00 0.00 3.85
290 291 3.341823 CATCTTTTGTCTCCAGGGTCTG 58.658 50.000 0.00 0.00 0.00 3.51
291 292 2.689658 TCTTTTGTCTCCAGGGTCTGA 58.310 47.619 0.00 0.00 32.44 3.27
292 293 2.634940 TCTTTTGTCTCCAGGGTCTGAG 59.365 50.000 0.00 0.00 32.44 3.35
293 294 2.398754 TTTGTCTCCAGGGTCTGAGA 57.601 50.000 0.00 0.00 32.44 3.27
294 295 2.630889 TTGTCTCCAGGGTCTGAGAT 57.369 50.000 0.00 0.00 32.44 2.75
295 296 2.630889 TGTCTCCAGGGTCTGAGATT 57.369 50.000 0.00 0.00 32.44 2.40
296 297 2.461695 TGTCTCCAGGGTCTGAGATTC 58.538 52.381 0.00 0.00 32.44 2.52
297 298 1.760029 GTCTCCAGGGTCTGAGATTCC 59.240 57.143 0.00 0.00 32.44 3.01
298 299 1.648568 TCTCCAGGGTCTGAGATTCCT 59.351 52.381 2.13 2.13 32.44 3.36
299 300 1.761784 CTCCAGGGTCTGAGATTCCTG 59.238 57.143 20.71 20.71 44.60 3.86
300 301 1.079490 TCCAGGGTCTGAGATTCCTGT 59.921 52.381 23.60 0.00 43.77 4.00
301 302 1.209019 CCAGGGTCTGAGATTCCTGTG 59.791 57.143 23.60 15.63 43.77 3.66
302 303 1.905215 CAGGGTCTGAGATTCCTGTGT 59.095 52.381 19.89 0.00 41.21 3.72
303 304 2.093764 CAGGGTCTGAGATTCCTGTGTC 60.094 54.545 19.89 0.00 41.21 3.67
304 305 1.134965 GGGTCTGAGATTCCTGTGTCG 60.135 57.143 0.00 0.00 0.00 4.35
305 306 1.819288 GGTCTGAGATTCCTGTGTCGA 59.181 52.381 0.00 0.00 0.00 4.20
306 307 2.428890 GGTCTGAGATTCCTGTGTCGAT 59.571 50.000 0.00 0.00 0.00 3.59
307 308 3.443037 GTCTGAGATTCCTGTGTCGATG 58.557 50.000 0.00 0.00 0.00 3.84
308 309 3.129462 GTCTGAGATTCCTGTGTCGATGA 59.871 47.826 0.00 0.00 0.00 2.92
309 310 3.379688 TCTGAGATTCCTGTGTCGATGAG 59.620 47.826 0.00 0.00 0.00 2.90
310 311 2.428530 TGAGATTCCTGTGTCGATGAGG 59.571 50.000 0.00 0.00 0.00 3.86
311 312 2.428890 GAGATTCCTGTGTCGATGAGGT 59.571 50.000 7.09 0.00 0.00 3.85
312 313 2.167281 AGATTCCTGTGTCGATGAGGTG 59.833 50.000 7.09 0.00 0.00 4.00
313 314 0.608130 TTCCTGTGTCGATGAGGTGG 59.392 55.000 7.09 0.00 0.00 4.61
314 315 0.251608 TCCTGTGTCGATGAGGTGGA 60.252 55.000 7.09 0.39 0.00 4.02
315 316 0.108615 CCTGTGTCGATGAGGTGGAC 60.109 60.000 0.00 0.00 36.24 4.02
316 317 0.456824 CTGTGTCGATGAGGTGGACG 60.457 60.000 0.00 0.00 38.29 4.79
317 318 0.891904 TGTGTCGATGAGGTGGACGA 60.892 55.000 0.00 0.00 38.29 4.20
318 319 0.456221 GTGTCGATGAGGTGGACGAT 59.544 55.000 0.00 0.00 38.29 3.73
319 320 0.455815 TGTCGATGAGGTGGACGATG 59.544 55.000 0.00 0.00 38.29 3.84
320 321 0.249073 GTCGATGAGGTGGACGATGG 60.249 60.000 0.00 0.00 37.14 3.51
321 322 1.068083 CGATGAGGTGGACGATGGG 59.932 63.158 0.00 0.00 0.00 4.00
322 323 1.391933 CGATGAGGTGGACGATGGGA 61.392 60.000 0.00 0.00 0.00 4.37
323 324 0.830648 GATGAGGTGGACGATGGGAA 59.169 55.000 0.00 0.00 0.00 3.97
324 325 0.833287 ATGAGGTGGACGATGGGAAG 59.167 55.000 0.00 0.00 0.00 3.46
325 326 0.252057 TGAGGTGGACGATGGGAAGA 60.252 55.000 0.00 0.00 0.00 2.87
326 327 1.123928 GAGGTGGACGATGGGAAGAT 58.876 55.000 0.00 0.00 0.00 2.40
327 328 2.317040 GAGGTGGACGATGGGAAGATA 58.683 52.381 0.00 0.00 0.00 1.98
328 329 2.698797 GAGGTGGACGATGGGAAGATAA 59.301 50.000 0.00 0.00 0.00 1.75
329 330 3.318313 AGGTGGACGATGGGAAGATAAT 58.682 45.455 0.00 0.00 0.00 1.28
330 331 4.489737 AGGTGGACGATGGGAAGATAATA 58.510 43.478 0.00 0.00 0.00 0.98
331 332 4.905456 AGGTGGACGATGGGAAGATAATAA 59.095 41.667 0.00 0.00 0.00 1.40
332 333 5.548056 AGGTGGACGATGGGAAGATAATAAT 59.452 40.000 0.00 0.00 0.00 1.28
333 334 6.729100 AGGTGGACGATGGGAAGATAATAATA 59.271 38.462 0.00 0.00 0.00 0.98
334 335 7.042335 GGTGGACGATGGGAAGATAATAATAG 58.958 42.308 0.00 0.00 0.00 1.73
335 336 6.535508 GTGGACGATGGGAAGATAATAATAGC 59.464 42.308 0.00 0.00 0.00 2.97
336 337 5.749109 GGACGATGGGAAGATAATAATAGCG 59.251 44.000 0.00 0.00 0.00 4.26
337 338 6.282199 ACGATGGGAAGATAATAATAGCGT 57.718 37.500 0.00 0.00 0.00 5.07
338 339 6.100004 ACGATGGGAAGATAATAATAGCGTG 58.900 40.000 0.00 0.00 0.00 5.34
339 340 6.100004 CGATGGGAAGATAATAATAGCGTGT 58.900 40.000 0.00 0.00 0.00 4.49
340 341 7.094075 ACGATGGGAAGATAATAATAGCGTGTA 60.094 37.037 0.00 0.00 0.00 2.90
341 342 7.921214 CGATGGGAAGATAATAATAGCGTGTAT 59.079 37.037 0.00 0.00 0.00 2.29
342 343 9.601217 GATGGGAAGATAATAATAGCGTGTATT 57.399 33.333 0.00 0.00 0.00 1.89
343 344 9.959721 ATGGGAAGATAATAATAGCGTGTATTT 57.040 29.630 0.00 0.00 0.00 1.40
344 345 9.787435 TGGGAAGATAATAATAGCGTGTATTTT 57.213 29.630 0.00 0.00 0.00 1.82
372 373 9.689075 CATGTAATATAATACTTGGCGAAATCG 57.311 33.333 0.00 0.00 43.27 3.34
373 374 9.647797 ATGTAATATAATACTTGGCGAAATCGA 57.352 29.630 7.06 0.00 43.02 3.59
383 384 1.815132 GCGAAATCGACAGAATTGCC 58.185 50.000 7.06 0.00 43.02 4.52
384 385 1.398390 GCGAAATCGACAGAATTGCCT 59.602 47.619 7.06 0.00 43.02 4.75
385 386 2.789092 GCGAAATCGACAGAATTGCCTG 60.789 50.000 7.06 0.00 43.02 4.85
386 387 2.789092 CGAAATCGACAGAATTGCCTGC 60.789 50.000 0.00 0.00 43.02 4.85
387 388 1.098050 AATCGACAGAATTGCCTGCC 58.902 50.000 0.00 0.00 37.68 4.85
388 389 0.254178 ATCGACAGAATTGCCTGCCT 59.746 50.000 0.00 0.00 37.68 4.75
389 390 0.036732 TCGACAGAATTGCCTGCCTT 59.963 50.000 0.00 0.00 37.68 4.35
390 391 0.169672 CGACAGAATTGCCTGCCTTG 59.830 55.000 0.00 0.00 37.68 3.61
391 392 0.108945 GACAGAATTGCCTGCCTTGC 60.109 55.000 0.00 0.00 37.68 4.01
392 393 0.828762 ACAGAATTGCCTGCCTTGCA 60.829 50.000 0.00 0.00 37.68 4.08
393 394 0.535335 CAGAATTGCCTGCCTTGCAT 59.465 50.000 0.00 0.00 38.13 3.96
394 395 1.752498 CAGAATTGCCTGCCTTGCATA 59.248 47.619 0.00 0.00 38.13 3.14
395 396 2.166870 CAGAATTGCCTGCCTTGCATAA 59.833 45.455 0.00 0.00 38.13 1.90
396 397 2.833338 AGAATTGCCTGCCTTGCATAAA 59.167 40.909 0.00 0.00 38.13 1.40
397 398 3.261390 AGAATTGCCTGCCTTGCATAAAA 59.739 39.130 0.00 0.00 38.13 1.52
398 399 2.747396 TTGCCTGCCTTGCATAAAAG 57.253 45.000 0.00 0.00 38.13 2.27
410 411 7.173863 CCTTGCATAAAAGGTATAGTACGTG 57.826 40.000 0.00 0.00 41.65 4.49
411 412 6.982141 CCTTGCATAAAAGGTATAGTACGTGA 59.018 38.462 0.00 0.00 41.65 4.35
412 413 7.169308 CCTTGCATAAAAGGTATAGTACGTGAG 59.831 40.741 0.00 0.00 41.65 3.51
413 414 6.509656 TGCATAAAAGGTATAGTACGTGAGG 58.490 40.000 0.00 0.00 0.00 3.86
414 415 6.321945 TGCATAAAAGGTATAGTACGTGAGGA 59.678 38.462 0.00 0.00 0.00 3.71
425 426 4.650754 GTACGTGAGGACCATTGACTAT 57.349 45.455 0.00 0.00 39.75 2.12
426 427 3.526931 ACGTGAGGACCATTGACTATG 57.473 47.619 0.00 0.00 0.00 2.23
442 443 3.552219 TGGTACACAACGGCTCCA 58.448 55.556 0.00 0.00 0.00 3.86
443 444 2.062922 TGGTACACAACGGCTCCAT 58.937 52.632 0.00 0.00 0.00 3.41
444 445 1.268066 TGGTACACAACGGCTCCATA 58.732 50.000 0.00 0.00 0.00 2.74
445 446 1.624312 TGGTACACAACGGCTCCATAA 59.376 47.619 0.00 0.00 0.00 1.90
446 447 2.038689 TGGTACACAACGGCTCCATAAA 59.961 45.455 0.00 0.00 0.00 1.40
447 448 2.417586 GGTACACAACGGCTCCATAAAC 59.582 50.000 0.00 0.00 0.00 2.01
448 449 2.561478 ACACAACGGCTCCATAAACT 57.439 45.000 0.00 0.00 0.00 2.66
449 450 2.423577 ACACAACGGCTCCATAAACTC 58.576 47.619 0.00 0.00 0.00 3.01
450 451 2.224426 ACACAACGGCTCCATAAACTCA 60.224 45.455 0.00 0.00 0.00 3.41
451 452 2.811431 CACAACGGCTCCATAAACTCAA 59.189 45.455 0.00 0.00 0.00 3.02
452 453 3.074412 ACAACGGCTCCATAAACTCAAG 58.926 45.455 0.00 0.00 0.00 3.02
453 454 3.074412 CAACGGCTCCATAAACTCAAGT 58.926 45.455 0.00 0.00 0.00 3.16
454 455 2.699954 ACGGCTCCATAAACTCAAGTG 58.300 47.619 0.00 0.00 0.00 3.16
455 456 2.009774 CGGCTCCATAAACTCAAGTGG 58.990 52.381 0.00 0.00 0.00 4.00
456 457 2.354704 CGGCTCCATAAACTCAAGTGGA 60.355 50.000 0.00 0.00 38.37 4.02
457 458 3.010420 GGCTCCATAAACTCAAGTGGAC 58.990 50.000 0.00 0.00 35.91 4.02
458 459 2.673368 GCTCCATAAACTCAAGTGGACG 59.327 50.000 0.00 0.00 35.91 4.79
459 460 3.616560 GCTCCATAAACTCAAGTGGACGA 60.617 47.826 0.00 0.00 35.91 4.20
460 461 3.921677 TCCATAAACTCAAGTGGACGAC 58.078 45.455 0.00 0.00 35.91 4.34
461 462 3.576982 TCCATAAACTCAAGTGGACGACT 59.423 43.478 0.00 0.00 35.91 4.18
462 463 3.679980 CCATAAACTCAAGTGGACGACTG 59.320 47.826 0.00 0.00 34.02 3.51
463 464 2.981859 AAACTCAAGTGGACGACTGT 57.018 45.000 0.00 0.00 34.02 3.55
464 465 5.466819 CATAAACTCAAGTGGACGACTGTA 58.533 41.667 0.00 0.00 34.02 2.74
465 466 3.366440 AACTCAAGTGGACGACTGTAC 57.634 47.619 0.00 0.00 34.02 2.90
466 467 2.304092 ACTCAAGTGGACGACTGTACA 58.696 47.619 0.00 0.00 36.27 2.90
467 468 2.293677 ACTCAAGTGGACGACTGTACAG 59.706 50.000 21.44 21.44 40.43 2.74
468 469 2.293677 CTCAAGTGGACGACTGTACAGT 59.706 50.000 28.27 28.27 44.82 3.55
469 470 3.479489 TCAAGTGGACGACTGTACAGTA 58.521 45.455 27.98 9.93 41.96 2.74
470 471 4.077108 TCAAGTGGACGACTGTACAGTAT 58.923 43.478 27.98 19.02 41.96 2.12
471 472 4.521639 TCAAGTGGACGACTGTACAGTATT 59.478 41.667 27.98 17.54 41.96 1.89
472 473 5.010314 TCAAGTGGACGACTGTACAGTATTT 59.990 40.000 27.98 15.01 41.96 1.40
473 474 6.207221 TCAAGTGGACGACTGTACAGTATTTA 59.793 38.462 27.98 11.27 41.96 1.40
474 475 6.770746 AGTGGACGACTGTACAGTATTTAT 57.229 37.500 27.98 11.92 40.96 1.40
475 476 6.793349 AGTGGACGACTGTACAGTATTTATC 58.207 40.000 27.98 18.69 40.96 1.75
476 477 6.376299 AGTGGACGACTGTACAGTATTTATCA 59.624 38.462 27.98 17.42 40.96 2.15
477 478 7.068348 AGTGGACGACTGTACAGTATTTATCAT 59.932 37.037 27.98 3.32 40.96 2.45
478 479 7.378995 GTGGACGACTGTACAGTATTTATCATC 59.621 40.741 27.98 12.37 40.43 2.92
479 480 7.067737 TGGACGACTGTACAGTATTTATCATCA 59.932 37.037 27.98 13.34 42.66 3.07
480 481 7.919091 GGACGACTGTACAGTATTTATCATCAA 59.081 37.037 27.98 0.00 42.66 2.57
481 482 8.858003 ACGACTGTACAGTATTTATCATCAAG 57.142 34.615 27.98 4.78 42.66 3.02
482 483 8.683615 ACGACTGTACAGTATTTATCATCAAGA 58.316 33.333 27.98 0.00 42.66 3.02
483 484 9.516314 CGACTGTACAGTATTTATCATCAAGAA 57.484 33.333 27.98 0.00 42.66 2.52
487 488 9.516314 TGTACAGTATTTATCATCAAGAAGACG 57.484 33.333 0.00 0.00 0.00 4.18
488 489 9.517609 GTACAGTATTTATCATCAAGAAGACGT 57.482 33.333 0.00 0.00 0.00 4.34
490 491 8.873830 ACAGTATTTATCATCAAGAAGACGTTG 58.126 33.333 0.00 0.00 0.00 4.10
491 492 8.873830 CAGTATTTATCATCAAGAAGACGTTGT 58.126 33.333 0.00 0.00 0.00 3.32
492 493 9.088512 AGTATTTATCATCAAGAAGACGTTGTC 57.911 33.333 0.00 0.00 0.00 3.18
493 494 7.905604 ATTTATCATCAAGAAGACGTTGTCA 57.094 32.000 0.00 0.00 34.60 3.58
494 495 7.722795 TTTATCATCAAGAAGACGTTGTCAA 57.277 32.000 0.00 0.00 34.60 3.18
495 496 5.852738 ATCATCAAGAAGACGTTGTCAAG 57.147 39.130 0.00 0.00 34.60 3.02
496 497 3.494626 TCATCAAGAAGACGTTGTCAAGC 59.505 43.478 0.00 0.00 34.60 4.01
497 498 2.899976 TCAAGAAGACGTTGTCAAGCA 58.100 42.857 0.00 0.00 34.60 3.91
498 499 3.466836 TCAAGAAGACGTTGTCAAGCAT 58.533 40.909 0.00 0.00 34.60 3.79
499 500 3.876914 TCAAGAAGACGTTGTCAAGCATT 59.123 39.130 0.00 0.00 34.60 3.56
500 501 4.024893 TCAAGAAGACGTTGTCAAGCATTC 60.025 41.667 0.00 0.00 34.60 2.67
501 502 3.466836 AGAAGACGTTGTCAAGCATTCA 58.533 40.909 0.00 0.00 34.60 2.57
502 503 3.248602 AGAAGACGTTGTCAAGCATTCAC 59.751 43.478 0.00 0.00 34.60 3.18
503 504 2.838736 AGACGTTGTCAAGCATTCACT 58.161 42.857 0.00 0.00 34.60 3.41
504 505 3.206150 AGACGTTGTCAAGCATTCACTT 58.794 40.909 0.00 0.00 34.60 3.16
505 506 3.248602 AGACGTTGTCAAGCATTCACTTC 59.751 43.478 0.00 0.00 34.60 3.01
506 507 2.032894 ACGTTGTCAAGCATTCACTTCG 60.033 45.455 0.00 0.00 0.00 3.79
507 508 2.032894 CGTTGTCAAGCATTCACTTCGT 60.033 45.455 0.00 0.00 0.00 3.85
508 509 3.183574 CGTTGTCAAGCATTCACTTCGTA 59.816 43.478 0.00 0.00 0.00 3.43
509 510 4.143115 CGTTGTCAAGCATTCACTTCGTAT 60.143 41.667 0.00 0.00 0.00 3.06
510 511 4.926860 TGTCAAGCATTCACTTCGTATG 57.073 40.909 0.00 0.00 0.00 2.39
511 512 3.684305 TGTCAAGCATTCACTTCGTATGG 59.316 43.478 0.00 0.00 0.00 2.74
512 513 3.684788 GTCAAGCATTCACTTCGTATGGT 59.315 43.478 0.00 0.00 34.94 3.55
513 514 4.868171 GTCAAGCATTCACTTCGTATGGTA 59.132 41.667 0.00 0.00 32.62 3.25
514 515 5.005779 GTCAAGCATTCACTTCGTATGGTAG 59.994 44.000 0.00 0.00 32.62 3.18
515 516 4.060038 AGCATTCACTTCGTATGGTAGG 57.940 45.455 0.00 0.00 32.09 3.18
516 517 3.704566 AGCATTCACTTCGTATGGTAGGA 59.295 43.478 0.00 0.00 32.09 2.94
517 518 3.802685 GCATTCACTTCGTATGGTAGGAC 59.197 47.826 0.00 0.00 0.00 3.85
518 519 4.441634 GCATTCACTTCGTATGGTAGGACT 60.442 45.833 0.00 0.00 0.00 3.85
519 520 4.978083 TTCACTTCGTATGGTAGGACTC 57.022 45.455 0.00 0.00 0.00 3.36
520 521 3.959293 TCACTTCGTATGGTAGGACTCA 58.041 45.455 0.00 0.00 0.00 3.41
521 522 3.693085 TCACTTCGTATGGTAGGACTCAC 59.307 47.826 0.00 0.00 0.00 3.51
522 523 3.442625 CACTTCGTATGGTAGGACTCACA 59.557 47.826 0.00 0.00 0.00 3.58
523 524 3.695060 ACTTCGTATGGTAGGACTCACAG 59.305 47.826 0.00 0.00 0.00 3.66
524 525 3.639672 TCGTATGGTAGGACTCACAGA 57.360 47.619 0.00 0.00 0.00 3.41
525 526 3.542648 TCGTATGGTAGGACTCACAGAG 58.457 50.000 0.00 0.00 35.52 3.35
526 527 2.619177 CGTATGGTAGGACTCACAGAGG 59.381 54.545 0.00 0.00 33.35 3.69
527 528 2.930109 ATGGTAGGACTCACAGAGGT 57.070 50.000 0.00 0.00 33.35 3.85
528 529 1.924731 TGGTAGGACTCACAGAGGTG 58.075 55.000 0.00 0.00 46.66 4.00
529 530 1.147191 TGGTAGGACTCACAGAGGTGT 59.853 52.381 0.00 0.00 45.45 4.16
530 531 2.249139 GGTAGGACTCACAGAGGTGTT 58.751 52.381 0.00 0.00 45.45 3.32
531 532 2.231721 GGTAGGACTCACAGAGGTGTTC 59.768 54.545 0.00 0.00 45.45 3.18
532 533 1.343069 AGGACTCACAGAGGTGTTCC 58.657 55.000 9.01 9.01 45.45 3.62
533 534 1.048601 GGACTCACAGAGGTGTTCCA 58.951 55.000 11.05 0.00 45.45 3.53
534 535 1.001406 GGACTCACAGAGGTGTTCCAG 59.999 57.143 11.05 0.00 45.45 3.86
535 536 0.394565 ACTCACAGAGGTGTTCCAGC 59.605 55.000 0.00 0.00 45.45 4.85
536 537 0.394192 CTCACAGAGGTGTTCCAGCA 59.606 55.000 0.00 0.00 45.45 4.41
537 538 0.394192 TCACAGAGGTGTTCCAGCAG 59.606 55.000 0.00 0.00 45.45 4.24
538 539 0.604780 CACAGAGGTGTTCCAGCAGG 60.605 60.000 0.00 0.00 40.24 4.85
539 540 0.764369 ACAGAGGTGTTCCAGCAGGA 60.764 55.000 0.00 0.00 43.93 3.86
540 541 4.452586 CACAGAGGTGTTCCAGCAGGAA 62.453 54.545 6.46 6.46 42.95 3.36
548 549 1.304381 TCCAGCAGGAATGTTGGGC 60.304 57.895 10.65 0.00 42.23 5.36
549 550 2.353610 CCAGCAGGAATGTTGGGCC 61.354 63.158 0.00 0.00 36.66 5.80
550 551 1.607178 CAGCAGGAATGTTGGGCCA 60.607 57.895 0.00 0.00 0.00 5.36
551 552 1.155859 AGCAGGAATGTTGGGCCAA 59.844 52.632 16.66 16.66 0.00 4.52
552 553 0.252375 AGCAGGAATGTTGGGCCAAT 60.252 50.000 23.95 6.37 0.00 3.16
553 554 1.006998 AGCAGGAATGTTGGGCCAATA 59.993 47.619 23.95 21.09 0.00 1.90
554 555 1.830477 GCAGGAATGTTGGGCCAATAA 59.170 47.619 23.95 14.59 0.00 1.40
555 556 2.235898 GCAGGAATGTTGGGCCAATAAA 59.764 45.455 23.95 11.88 0.00 1.40
556 557 3.679639 GCAGGAATGTTGGGCCAATAAAG 60.680 47.826 23.95 10.16 0.00 1.85
557 558 3.515104 CAGGAATGTTGGGCCAATAAAGT 59.485 43.478 23.95 10.67 0.00 2.66
558 559 3.515104 AGGAATGTTGGGCCAATAAAGTG 59.485 43.478 23.95 0.00 0.00 3.16
559 560 3.260632 GGAATGTTGGGCCAATAAAGTGT 59.739 43.478 23.95 0.62 0.00 3.55
560 561 4.464597 GGAATGTTGGGCCAATAAAGTGTA 59.535 41.667 23.95 2.39 0.00 2.90
561 562 5.128663 GGAATGTTGGGCCAATAAAGTGTAT 59.871 40.000 23.95 0.00 0.00 2.29
562 563 5.852282 ATGTTGGGCCAATAAAGTGTATC 57.148 39.130 23.95 5.72 0.00 2.24
563 564 4.020543 TGTTGGGCCAATAAAGTGTATCC 58.979 43.478 23.95 5.17 0.00 2.59
564 565 4.264172 TGTTGGGCCAATAAAGTGTATCCT 60.264 41.667 23.95 0.00 0.00 3.24
565 566 4.601406 TGGGCCAATAAAGTGTATCCTT 57.399 40.909 2.13 0.00 0.00 3.36
566 567 4.941713 TGGGCCAATAAAGTGTATCCTTT 58.058 39.130 2.13 0.00 38.23 3.11
567 568 5.337788 TGGGCCAATAAAGTGTATCCTTTT 58.662 37.500 2.13 0.00 36.18 2.27
568 569 5.782845 TGGGCCAATAAAGTGTATCCTTTTT 59.217 36.000 2.13 0.00 36.18 1.94
569 570 6.106003 GGGCCAATAAAGTGTATCCTTTTTG 58.894 40.000 4.39 0.00 36.18 2.44
570 571 5.580691 GGCCAATAAAGTGTATCCTTTTTGC 59.419 40.000 0.00 0.00 36.18 3.68
571 572 6.162777 GCCAATAAAGTGTATCCTTTTTGCA 58.837 36.000 0.00 0.00 36.18 4.08
572 573 6.648725 GCCAATAAAGTGTATCCTTTTTGCAA 59.351 34.615 0.00 0.00 36.18 4.08
573 574 7.172361 GCCAATAAAGTGTATCCTTTTTGCAAA 59.828 33.333 8.05 8.05 36.18 3.68
574 575 9.050601 CCAATAAAGTGTATCCTTTTTGCAAAA 57.949 29.630 20.46 20.46 36.18 2.44
761 762 1.750206 TGCGGCCGAGTTGTACTTATA 59.250 47.619 33.48 0.00 0.00 0.98
816 819 6.863275 TGAACTAGCATCTAAACAGATCGAA 58.137 36.000 0.00 0.00 0.00 3.71
833 836 4.602340 TCGAAAAGCTGTACTTCTCCTT 57.398 40.909 0.00 0.00 37.75 3.36
856 859 1.280457 GCCTCCTTTCTCCTTCTCCA 58.720 55.000 0.00 0.00 0.00 3.86
874 878 1.628043 CCAAGATCCCCTTCCCTACCA 60.628 57.143 0.00 0.00 31.42 3.25
984 989 0.606401 GCTACCAGACCAAGCAAGCA 60.606 55.000 0.00 0.00 36.26 3.91
1238 1243 2.519780 GGCTCCGTCTCCTCCGAT 60.520 66.667 0.00 0.00 0.00 4.18
1481 1487 1.822371 ACCGAAATTGGATTTTCCCCG 59.178 47.619 0.00 0.00 35.03 5.73
1853 1859 2.777692 TCCTAGATGGGTTAAAGGCTGG 59.222 50.000 0.00 0.00 36.20 4.85
1896 1902 3.686016 ACATAGACCGCAAAACTTGGAT 58.314 40.909 0.00 0.00 0.00 3.41
2023 2029 2.440065 CAGCAATAGCCGGGCCAA 60.440 61.111 17.02 4.50 43.56 4.52
2313 2320 2.266554 CAAGCAGAGTCTGATTCGGAC 58.733 52.381 24.55 16.43 38.05 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.972872 AATTCCATCCGCCAGCTTAG 58.027 50.000 0.00 0.00 0.00 2.18
3 4 2.435372 AAATTCCATCCGCCAGCTTA 57.565 45.000 0.00 0.00 0.00 3.09
5 6 2.624838 CAATAAATTCCATCCGCCAGCT 59.375 45.455 0.00 0.00 0.00 4.24
6 7 2.863704 GCAATAAATTCCATCCGCCAGC 60.864 50.000 0.00 0.00 0.00 4.85
7 8 2.624838 AGCAATAAATTCCATCCGCCAG 59.375 45.455 0.00 0.00 0.00 4.85
8 9 2.622942 GAGCAATAAATTCCATCCGCCA 59.377 45.455 0.00 0.00 0.00 5.69
9 10 2.029918 GGAGCAATAAATTCCATCCGCC 60.030 50.000 0.00 0.00 0.00 6.13
10 11 2.887152 AGGAGCAATAAATTCCATCCGC 59.113 45.455 0.00 0.00 33.32 5.54
11 12 5.520376 AAAGGAGCAATAAATTCCATCCG 57.480 39.130 0.00 0.00 33.32 4.18
37 38 5.066593 AGCAATAAAATTTCCCCGCAAAAA 58.933 33.333 0.00 0.00 0.00 1.94
38 39 4.646572 AGCAATAAAATTTCCCCGCAAAA 58.353 34.783 0.00 0.00 0.00 2.44
39 40 4.249661 GAGCAATAAAATTTCCCCGCAAA 58.750 39.130 0.00 0.00 0.00 3.68
40 41 3.368948 GGAGCAATAAAATTTCCCCGCAA 60.369 43.478 0.00 0.00 0.00 4.85
41 42 2.167487 GGAGCAATAAAATTTCCCCGCA 59.833 45.455 0.00 0.00 0.00 5.69
42 43 2.167487 TGGAGCAATAAAATTTCCCCGC 59.833 45.455 0.00 0.00 0.00 6.13
43 44 4.501400 GGATGGAGCAATAAAATTTCCCCG 60.501 45.833 0.00 0.00 0.00 5.73
44 45 4.501400 CGGATGGAGCAATAAAATTTCCCC 60.501 45.833 0.00 0.00 0.00 4.81
45 46 4.099419 ACGGATGGAGCAATAAAATTTCCC 59.901 41.667 0.00 0.00 0.00 3.97
46 47 5.163561 TGACGGATGGAGCAATAAAATTTCC 60.164 40.000 0.00 0.00 0.00 3.13
47 48 5.890334 TGACGGATGGAGCAATAAAATTTC 58.110 37.500 0.00 0.00 0.00 2.17
48 49 5.913137 TGACGGATGGAGCAATAAAATTT 57.087 34.783 0.00 0.00 0.00 1.82
49 50 5.277974 CGATGACGGATGGAGCAATAAAATT 60.278 40.000 0.00 0.00 35.72 1.82
50 51 4.214119 CGATGACGGATGGAGCAATAAAAT 59.786 41.667 0.00 0.00 35.72 1.82
51 52 3.559655 CGATGACGGATGGAGCAATAAAA 59.440 43.478 0.00 0.00 35.72 1.52
52 53 3.130633 CGATGACGGATGGAGCAATAAA 58.869 45.455 0.00 0.00 35.72 1.40
53 54 2.754472 CGATGACGGATGGAGCAATAA 58.246 47.619 0.00 0.00 35.72 1.40
54 55 2.438868 CGATGACGGATGGAGCAATA 57.561 50.000 0.00 0.00 35.72 1.90
55 56 3.295734 CGATGACGGATGGAGCAAT 57.704 52.632 0.00 0.00 35.72 3.56
56 57 4.833811 CGATGACGGATGGAGCAA 57.166 55.556 0.00 0.00 35.72 3.91
66 67 1.413767 CGAAGCCTGAACCGATGACG 61.414 60.000 0.00 0.00 39.43 4.35
67 68 0.389948 ACGAAGCCTGAACCGATGAC 60.390 55.000 0.00 0.00 0.00 3.06
68 69 0.108804 GACGAAGCCTGAACCGATGA 60.109 55.000 0.00 0.00 0.00 2.92
69 70 0.108615 AGACGAAGCCTGAACCGATG 60.109 55.000 0.00 0.00 0.00 3.84
70 71 0.173708 GAGACGAAGCCTGAACCGAT 59.826 55.000 0.00 0.00 0.00 4.18
71 72 1.176619 TGAGACGAAGCCTGAACCGA 61.177 55.000 0.00 0.00 0.00 4.69
72 73 0.734253 CTGAGACGAAGCCTGAACCG 60.734 60.000 0.00 0.00 0.00 4.44
73 74 0.603569 TCTGAGACGAAGCCTGAACC 59.396 55.000 0.00 0.00 0.00 3.62
74 75 1.271102 AGTCTGAGACGAAGCCTGAAC 59.729 52.381 6.99 0.00 37.67 3.18
75 76 1.621992 AGTCTGAGACGAAGCCTGAA 58.378 50.000 6.99 0.00 37.67 3.02
76 77 1.542030 GAAGTCTGAGACGAAGCCTGA 59.458 52.381 6.99 0.00 37.67 3.86
77 78 1.270826 TGAAGTCTGAGACGAAGCCTG 59.729 52.381 6.99 0.00 37.67 4.85
78 79 1.543802 CTGAAGTCTGAGACGAAGCCT 59.456 52.381 6.99 0.00 37.67 4.58
79 80 1.542030 TCTGAAGTCTGAGACGAAGCC 59.458 52.381 6.99 0.00 37.67 4.35
80 81 2.030717 TGTCTGAAGTCTGAGACGAAGC 60.031 50.000 6.99 0.00 41.37 3.86
81 82 3.560503 GTGTCTGAAGTCTGAGACGAAG 58.439 50.000 6.99 6.44 41.37 3.79
82 83 3.627732 GTGTCTGAAGTCTGAGACGAA 57.372 47.619 6.99 0.00 41.37 3.85
85 86 3.664798 CGTACGTGTCTGAAGTCTGAGAC 60.665 52.174 7.22 3.98 39.31 3.36
86 87 2.479275 CGTACGTGTCTGAAGTCTGAGA 59.521 50.000 7.22 0.00 0.00 3.27
87 88 2.479275 TCGTACGTGTCTGAAGTCTGAG 59.521 50.000 16.05 0.00 0.00 3.35
88 89 2.479275 CTCGTACGTGTCTGAAGTCTGA 59.521 50.000 16.05 0.00 0.00 3.27
89 90 2.223611 ACTCGTACGTGTCTGAAGTCTG 59.776 50.000 16.65 0.00 0.00 3.51
90 91 2.492012 ACTCGTACGTGTCTGAAGTCT 58.508 47.619 16.65 0.00 0.00 3.24
91 92 2.965477 ACTCGTACGTGTCTGAAGTC 57.035 50.000 16.65 0.00 0.00 3.01
92 93 2.740981 CCTACTCGTACGTGTCTGAAGT 59.259 50.000 24.58 15.95 0.00 3.01
93 94 2.095532 CCCTACTCGTACGTGTCTGAAG 59.904 54.545 24.58 16.35 0.00 3.02
94 95 2.079158 CCCTACTCGTACGTGTCTGAA 58.921 52.381 24.58 8.19 0.00 3.02
95 96 1.730501 CCCTACTCGTACGTGTCTGA 58.269 55.000 24.58 8.53 0.00 3.27
96 97 0.098376 GCCCTACTCGTACGTGTCTG 59.902 60.000 24.58 17.91 0.00 3.51
97 98 1.028868 GGCCCTACTCGTACGTGTCT 61.029 60.000 24.58 6.01 0.00 3.41
98 99 1.431036 GGCCCTACTCGTACGTGTC 59.569 63.158 24.58 11.49 0.00 3.67
99 100 2.401766 CGGCCCTACTCGTACGTGT 61.402 63.158 24.33 24.33 0.00 4.49
100 101 1.442526 ATCGGCCCTACTCGTACGTG 61.443 60.000 16.05 15.64 0.00 4.49
101 102 1.153086 ATCGGCCCTACTCGTACGT 60.153 57.895 16.05 0.00 0.00 3.57
102 103 0.883814 AGATCGGCCCTACTCGTACG 60.884 60.000 9.53 9.53 0.00 3.67
103 104 0.873721 GAGATCGGCCCTACTCGTAC 59.126 60.000 0.00 0.00 0.00 3.67
104 105 0.602106 CGAGATCGGCCCTACTCGTA 60.602 60.000 23.05 0.00 44.37 3.43
105 106 1.892862 CGAGATCGGCCCTACTCGT 60.893 63.158 23.05 0.00 44.37 4.18
106 107 2.947542 CGAGATCGGCCCTACTCG 59.052 66.667 19.97 19.97 44.10 4.18
107 108 2.646143 GCGAGATCGGCCCTACTC 59.354 66.667 0.00 2.23 40.23 2.59
115 116 4.674904 CGAGCGAGGCGAGATCGG 62.675 72.222 13.39 0.00 40.50 4.18
117 118 4.992294 GGCGAGCGAGGCGAGATC 62.992 72.222 0.00 0.00 0.00 2.75
134 135 4.653888 ACCGAACAAAGGGCCGGG 62.654 66.667 2.18 0.00 45.63 5.73
135 136 3.053896 GACCGAACAAAGGGCCGG 61.054 66.667 0.00 0.00 46.65 6.13
138 139 2.033194 CGAGGACCGAACAAAGGGC 61.033 63.158 0.00 0.00 41.76 5.19
139 140 2.033194 GCGAGGACCGAACAAAGGG 61.033 63.158 0.00 0.00 41.76 3.95
140 141 1.004918 AGCGAGGACCGAACAAAGG 60.005 57.895 0.00 0.00 41.76 3.11
141 142 0.038159 AGAGCGAGGACCGAACAAAG 60.038 55.000 0.00 0.00 41.76 2.77
142 143 0.391597 AAGAGCGAGGACCGAACAAA 59.608 50.000 0.00 0.00 41.76 2.83
143 144 1.068055 GTAAGAGCGAGGACCGAACAA 60.068 52.381 0.00 0.00 41.76 2.83
144 145 0.524862 GTAAGAGCGAGGACCGAACA 59.475 55.000 0.00 0.00 41.76 3.18
145 146 0.522915 CGTAAGAGCGAGGACCGAAC 60.523 60.000 0.00 0.00 39.81 3.95
146 147 0.674581 TCGTAAGAGCGAGGACCGAA 60.675 55.000 0.00 0.00 45.01 4.30
147 148 1.078918 TCGTAAGAGCGAGGACCGA 60.079 57.895 0.00 0.00 45.01 4.69
148 149 3.494378 TCGTAAGAGCGAGGACCG 58.506 61.111 0.00 0.00 45.01 4.79
153 154 7.562917 AAGGAGACCTTTTCGTAAGAGCGAG 62.563 48.000 0.00 0.00 41.69 5.03
154 155 5.823885 AAGGAGACCTTTTCGTAAGAGCGA 61.824 45.833 0.00 0.00 41.69 4.93
155 156 3.614390 AAGGAGACCTTTTCGTAAGAGCG 60.614 47.826 0.00 0.00 41.69 5.03
156 157 3.680458 CAAGGAGACCTTTTCGTAAGAGC 59.320 47.826 0.00 0.00 45.56 4.09
157 158 4.884247 ACAAGGAGACCTTTTCGTAAGAG 58.116 43.478 0.00 0.00 45.56 2.85
158 159 4.879598 GACAAGGAGACCTTTTCGTAAGA 58.120 43.478 0.00 0.00 41.69 2.10
164 165 2.031944 GCAACGACAAGGAGACCTTTTC 60.032 50.000 0.00 3.76 41.69 2.29
165 166 1.947456 GCAACGACAAGGAGACCTTTT 59.053 47.619 0.00 0.00 41.69 2.27
166 167 1.594331 GCAACGACAAGGAGACCTTT 58.406 50.000 0.00 0.00 41.69 3.11
167 168 0.600255 CGCAACGACAAGGAGACCTT 60.600 55.000 0.00 0.00 45.88 3.50
168 169 1.006102 CGCAACGACAAGGAGACCT 60.006 57.895 0.00 0.00 33.87 3.85
169 170 2.668280 GCGCAACGACAAGGAGACC 61.668 63.158 0.30 0.00 0.00 3.85
170 171 1.618640 GAGCGCAACGACAAGGAGAC 61.619 60.000 11.47 0.00 0.00 3.36
171 172 1.372997 GAGCGCAACGACAAGGAGA 60.373 57.895 11.47 0.00 0.00 3.71
172 173 2.383527 GGAGCGCAACGACAAGGAG 61.384 63.158 11.47 0.00 0.00 3.69
173 174 2.357034 GGAGCGCAACGACAAGGA 60.357 61.111 11.47 0.00 0.00 3.36
174 175 2.357517 AGGAGCGCAACGACAAGG 60.358 61.111 11.47 0.00 0.00 3.61
175 176 1.956170 ACAGGAGCGCAACGACAAG 60.956 57.895 11.47 0.00 0.00 3.16
176 177 2.108157 ACAGGAGCGCAACGACAA 59.892 55.556 11.47 0.00 0.00 3.18
177 178 2.661537 CACAGGAGCGCAACGACA 60.662 61.111 11.47 0.00 0.00 4.35
178 179 4.077188 GCACAGGAGCGCAACGAC 62.077 66.667 11.47 0.00 0.00 4.34
179 180 2.819117 CTAGCACAGGAGCGCAACGA 62.819 60.000 11.47 0.00 40.15 3.85
180 181 2.432456 TAGCACAGGAGCGCAACG 60.432 61.111 11.47 0.00 40.15 4.10
181 182 0.108804 TACTAGCACAGGAGCGCAAC 60.109 55.000 11.47 0.54 40.15 4.17
182 183 0.824109 ATACTAGCACAGGAGCGCAA 59.176 50.000 11.47 0.00 40.15 4.85
183 184 0.385751 GATACTAGCACAGGAGCGCA 59.614 55.000 11.47 0.00 40.15 6.09
184 185 0.385751 TGATACTAGCACAGGAGCGC 59.614 55.000 0.00 0.00 40.15 5.92
185 186 2.871182 TTGATACTAGCACAGGAGCG 57.129 50.000 0.00 0.00 40.15 5.03
186 187 4.305769 CTGATTGATACTAGCACAGGAGC 58.694 47.826 0.00 0.00 0.00 4.70
187 188 4.305769 GCTGATTGATACTAGCACAGGAG 58.694 47.826 0.00 0.00 36.24 3.69
188 189 3.070159 GGCTGATTGATACTAGCACAGGA 59.930 47.826 0.00 0.00 37.89 3.86
189 190 3.181462 TGGCTGATTGATACTAGCACAGG 60.181 47.826 0.00 0.00 37.89 4.00
190 191 4.056740 CTGGCTGATTGATACTAGCACAG 58.943 47.826 0.00 0.00 37.89 3.66
191 192 3.181462 CCTGGCTGATTGATACTAGCACA 60.181 47.826 0.00 0.00 37.89 4.57
192 193 3.397482 CCTGGCTGATTGATACTAGCAC 58.603 50.000 0.00 0.00 37.89 4.40
193 194 2.224378 GCCTGGCTGATTGATACTAGCA 60.224 50.000 12.43 0.00 37.89 3.49
194 195 2.421619 GCCTGGCTGATTGATACTAGC 58.578 52.381 12.43 0.00 35.49 3.42
195 196 2.036475 ACGCCTGGCTGATTGATACTAG 59.964 50.000 17.92 0.00 0.00 2.57
196 197 2.039418 ACGCCTGGCTGATTGATACTA 58.961 47.619 17.92 0.00 0.00 1.82
197 198 0.833287 ACGCCTGGCTGATTGATACT 59.167 50.000 17.92 0.00 0.00 2.12
198 199 2.526304 TACGCCTGGCTGATTGATAC 57.474 50.000 17.92 0.00 0.00 2.24
199 200 2.368548 ACATACGCCTGGCTGATTGATA 59.631 45.455 17.92 0.00 0.00 2.15
200 201 1.141657 ACATACGCCTGGCTGATTGAT 59.858 47.619 17.92 0.00 0.00 2.57
201 202 0.541392 ACATACGCCTGGCTGATTGA 59.459 50.000 17.92 0.00 0.00 2.57
202 203 2.138320 CTACATACGCCTGGCTGATTG 58.862 52.381 17.92 11.10 0.00 2.67
203 204 2.039418 TCTACATACGCCTGGCTGATT 58.961 47.619 17.92 0.61 0.00 2.57
204 205 1.704641 TCTACATACGCCTGGCTGAT 58.295 50.000 17.92 6.74 0.00 2.90
205 206 1.341209 CATCTACATACGCCTGGCTGA 59.659 52.381 17.92 4.33 0.00 4.26
206 207 1.341209 TCATCTACATACGCCTGGCTG 59.659 52.381 17.92 10.98 0.00 4.85
207 208 1.615883 CTCATCTACATACGCCTGGCT 59.384 52.381 17.92 6.50 0.00 4.75
208 209 1.613925 TCTCATCTACATACGCCTGGC 59.386 52.381 9.11 9.11 0.00 4.85
209 210 3.119316 GGATCTCATCTACATACGCCTGG 60.119 52.174 0.00 0.00 0.00 4.45
210 211 3.507622 TGGATCTCATCTACATACGCCTG 59.492 47.826 0.00 0.00 0.00 4.85
211 212 3.767711 TGGATCTCATCTACATACGCCT 58.232 45.455 0.00 0.00 0.00 5.52
212 213 4.677584 GATGGATCTCATCTACATACGCC 58.322 47.826 13.77 0.00 46.59 5.68
232 233 4.815973 TAGCCCGGCCCAGTGGAT 62.816 66.667 11.95 0.00 0.00 3.41
235 236 4.473520 CTGTAGCCCGGCCCAGTG 62.474 72.222 15.51 0.00 0.00 3.66
237 238 4.162690 GACTGTAGCCCGGCCCAG 62.163 72.222 20.12 20.12 35.22 4.45
238 239 4.715130 AGACTGTAGCCCGGCCCA 62.715 66.667 5.55 2.21 0.00 5.36
239 240 3.851128 GAGACTGTAGCCCGGCCC 61.851 72.222 5.55 0.00 0.00 5.80
240 241 2.760385 AGAGACTGTAGCCCGGCC 60.760 66.667 5.55 0.00 0.00 6.13
241 242 2.496817 CAGAGACTGTAGCCCGGC 59.503 66.667 0.00 0.00 0.00 6.13
242 243 1.608717 AAGCAGAGACTGTAGCCCGG 61.609 60.000 0.00 0.00 33.43 5.73
243 244 0.247736 AAAGCAGAGACTGTAGCCCG 59.752 55.000 0.00 0.00 33.43 6.13
244 245 1.737363 CGAAAGCAGAGACTGTAGCCC 60.737 57.143 0.00 0.00 33.43 5.19
245 246 1.067495 ACGAAAGCAGAGACTGTAGCC 60.067 52.381 0.00 0.00 33.43 3.93
246 247 2.355717 ACGAAAGCAGAGACTGTAGC 57.644 50.000 0.00 0.00 33.43 3.58
247 248 2.410053 GCAACGAAAGCAGAGACTGTAG 59.590 50.000 0.00 0.00 33.43 2.74
248 249 2.404215 GCAACGAAAGCAGAGACTGTA 58.596 47.619 0.00 0.00 33.43 2.74
249 250 1.221414 GCAACGAAAGCAGAGACTGT 58.779 50.000 0.00 0.00 33.43 3.55
250 251 0.514691 GGCAACGAAAGCAGAGACTG 59.485 55.000 0.00 0.00 34.12 3.51
251 252 0.106708 TGGCAACGAAAGCAGAGACT 59.893 50.000 0.00 0.00 42.51 3.24
252 253 1.129437 GATGGCAACGAAAGCAGAGAC 59.871 52.381 0.00 0.00 42.51 3.36
253 254 1.002430 AGATGGCAACGAAAGCAGAGA 59.998 47.619 0.00 0.00 42.51 3.10
254 255 1.446907 AGATGGCAACGAAAGCAGAG 58.553 50.000 0.00 0.00 42.51 3.35
255 256 1.896220 AAGATGGCAACGAAAGCAGA 58.104 45.000 0.00 0.00 42.51 4.26
256 257 2.712057 AAAGATGGCAACGAAAGCAG 57.288 45.000 0.00 0.00 42.51 4.24
257 258 2.100584 ACAAAAGATGGCAACGAAAGCA 59.899 40.909 0.00 0.00 42.51 3.91
258 259 2.726241 GACAAAAGATGGCAACGAAAGC 59.274 45.455 0.00 0.00 36.87 3.51
259 260 4.222114 GAGACAAAAGATGGCAACGAAAG 58.778 43.478 0.00 0.00 40.75 2.62
260 261 3.004315 GGAGACAAAAGATGGCAACGAAA 59.996 43.478 0.00 0.00 40.75 3.46
261 262 2.552315 GGAGACAAAAGATGGCAACGAA 59.448 45.455 0.00 0.00 40.75 3.85
262 263 2.151202 GGAGACAAAAGATGGCAACGA 58.849 47.619 0.00 0.00 40.75 3.85
263 264 1.879380 TGGAGACAAAAGATGGCAACG 59.121 47.619 0.00 0.00 40.75 4.10
264 265 2.229784 CCTGGAGACAAAAGATGGCAAC 59.770 50.000 0.00 0.00 40.75 4.17
265 266 2.517959 CCTGGAGACAAAAGATGGCAA 58.482 47.619 0.00 0.00 40.75 4.52
266 267 1.272092 CCCTGGAGACAAAAGATGGCA 60.272 52.381 0.00 0.00 40.75 4.92
267 268 1.272147 ACCCTGGAGACAAAAGATGGC 60.272 52.381 0.00 0.00 42.06 4.40
268 269 2.307098 AGACCCTGGAGACAAAAGATGG 59.693 50.000 0.00 0.00 42.06 3.51
269 270 3.008375 TCAGACCCTGGAGACAAAAGATG 59.992 47.826 0.00 0.00 42.06 2.90
270 271 3.251484 TCAGACCCTGGAGACAAAAGAT 58.749 45.455 0.00 0.00 42.06 2.40
271 272 2.634940 CTCAGACCCTGGAGACAAAAGA 59.365 50.000 0.00 0.00 42.06 2.52
272 273 2.634940 TCTCAGACCCTGGAGACAAAAG 59.365 50.000 0.00 0.00 42.06 2.27
273 274 2.689658 TCTCAGACCCTGGAGACAAAA 58.310 47.619 0.00 0.00 42.06 2.44
274 275 2.398754 TCTCAGACCCTGGAGACAAA 57.601 50.000 0.00 0.00 42.06 2.83
275 276 2.630889 ATCTCAGACCCTGGAGACAA 57.369 50.000 0.00 0.00 42.06 3.18
276 277 2.461695 GAATCTCAGACCCTGGAGACA 58.538 52.381 0.00 0.00 39.59 3.41
277 278 1.760029 GGAATCTCAGACCCTGGAGAC 59.240 57.143 0.00 0.00 31.51 3.36
278 279 1.648568 AGGAATCTCAGACCCTGGAGA 59.351 52.381 0.00 0.00 31.51 3.71
279 280 1.761784 CAGGAATCTCAGACCCTGGAG 59.238 57.143 14.52 0.00 41.76 3.86
280 281 1.871418 CAGGAATCTCAGACCCTGGA 58.129 55.000 14.52 0.00 41.76 3.86
283 284 2.183679 GACACAGGAATCTCAGACCCT 58.816 52.381 0.00 0.00 0.00 4.34
284 285 1.134965 CGACACAGGAATCTCAGACCC 60.135 57.143 0.00 0.00 0.00 4.46
285 286 1.819288 TCGACACAGGAATCTCAGACC 59.181 52.381 0.00 0.00 0.00 3.85
286 287 3.129462 TCATCGACACAGGAATCTCAGAC 59.871 47.826 0.00 0.00 0.00 3.51
287 288 3.356290 TCATCGACACAGGAATCTCAGA 58.644 45.455 0.00 0.00 0.00 3.27
288 289 3.490590 CCTCATCGACACAGGAATCTCAG 60.491 52.174 0.57 0.00 0.00 3.35
289 290 2.428530 CCTCATCGACACAGGAATCTCA 59.571 50.000 0.57 0.00 0.00 3.27
290 291 2.428890 ACCTCATCGACACAGGAATCTC 59.571 50.000 12.09 0.00 0.00 2.75
291 292 2.167281 CACCTCATCGACACAGGAATCT 59.833 50.000 12.09 0.00 0.00 2.40
292 293 2.544685 CACCTCATCGACACAGGAATC 58.455 52.381 12.09 0.00 0.00 2.52
293 294 1.208052 CCACCTCATCGACACAGGAAT 59.792 52.381 12.09 0.00 0.00 3.01
294 295 0.608130 CCACCTCATCGACACAGGAA 59.392 55.000 12.09 0.00 0.00 3.36
295 296 0.251608 TCCACCTCATCGACACAGGA 60.252 55.000 12.09 1.75 0.00 3.86
296 297 0.108615 GTCCACCTCATCGACACAGG 60.109 60.000 4.86 4.86 0.00 4.00
297 298 0.456824 CGTCCACCTCATCGACACAG 60.457 60.000 0.00 0.00 0.00 3.66
298 299 0.891904 TCGTCCACCTCATCGACACA 60.892 55.000 0.00 0.00 0.00 3.72
299 300 0.456221 ATCGTCCACCTCATCGACAC 59.544 55.000 0.00 0.00 35.24 3.67
300 301 0.455815 CATCGTCCACCTCATCGACA 59.544 55.000 0.00 0.00 35.24 4.35
301 302 0.249073 CCATCGTCCACCTCATCGAC 60.249 60.000 0.00 0.00 35.24 4.20
302 303 1.391933 CCCATCGTCCACCTCATCGA 61.392 60.000 0.00 0.00 36.77 3.59
303 304 1.068083 CCCATCGTCCACCTCATCG 59.932 63.158 0.00 0.00 0.00 3.84
304 305 0.830648 TTCCCATCGTCCACCTCATC 59.169 55.000 0.00 0.00 0.00 2.92
305 306 0.833287 CTTCCCATCGTCCACCTCAT 59.167 55.000 0.00 0.00 0.00 2.90
306 307 0.252057 TCTTCCCATCGTCCACCTCA 60.252 55.000 0.00 0.00 0.00 3.86
307 308 1.123928 ATCTTCCCATCGTCCACCTC 58.876 55.000 0.00 0.00 0.00 3.85
308 309 2.471815 TATCTTCCCATCGTCCACCT 57.528 50.000 0.00 0.00 0.00 4.00
309 310 3.771577 ATTATCTTCCCATCGTCCACC 57.228 47.619 0.00 0.00 0.00 4.61
310 311 6.535508 GCTATTATTATCTTCCCATCGTCCAC 59.464 42.308 0.00 0.00 0.00 4.02
311 312 6.627287 CGCTATTATTATCTTCCCATCGTCCA 60.627 42.308 0.00 0.00 0.00 4.02
312 313 5.749109 CGCTATTATTATCTTCCCATCGTCC 59.251 44.000 0.00 0.00 0.00 4.79
313 314 6.253727 CACGCTATTATTATCTTCCCATCGTC 59.746 42.308 0.00 0.00 0.00 4.20
314 315 6.100004 CACGCTATTATTATCTTCCCATCGT 58.900 40.000 0.00 0.00 0.00 3.73
315 316 6.100004 ACACGCTATTATTATCTTCCCATCG 58.900 40.000 0.00 0.00 0.00 3.84
316 317 9.601217 AATACACGCTATTATTATCTTCCCATC 57.399 33.333 0.00 0.00 0.00 3.51
317 318 9.959721 AAATACACGCTATTATTATCTTCCCAT 57.040 29.630 0.00 0.00 0.00 4.00
318 319 9.787435 AAAATACACGCTATTATTATCTTCCCA 57.213 29.630 0.00 0.00 0.00 4.37
346 347 9.689075 CGATTTCGCCAAGTATTATATTACATG 57.311 33.333 7.37 5.60 0.00 3.21
347 348 9.647797 TCGATTTCGCCAAGTATTATATTACAT 57.352 29.630 7.37 0.00 39.60 2.29
348 349 8.918658 GTCGATTTCGCCAAGTATTATATTACA 58.081 33.333 7.37 0.00 39.60 2.41
349 350 8.918658 TGTCGATTTCGCCAAGTATTATATTAC 58.081 33.333 0.00 0.00 39.60 1.89
350 351 9.135843 CTGTCGATTTCGCCAAGTATTATATTA 57.864 33.333 0.00 0.00 39.60 0.98
351 352 7.870954 TCTGTCGATTTCGCCAAGTATTATATT 59.129 33.333 0.00 0.00 39.60 1.28
352 353 7.375834 TCTGTCGATTTCGCCAAGTATTATAT 58.624 34.615 0.00 0.00 39.60 0.86
353 354 6.741109 TCTGTCGATTTCGCCAAGTATTATA 58.259 36.000 0.00 0.00 39.60 0.98
354 355 5.597806 TCTGTCGATTTCGCCAAGTATTAT 58.402 37.500 0.00 0.00 39.60 1.28
355 356 5.001237 TCTGTCGATTTCGCCAAGTATTA 57.999 39.130 0.00 0.00 39.60 0.98
356 357 3.857052 TCTGTCGATTTCGCCAAGTATT 58.143 40.909 0.00 0.00 39.60 1.89
357 358 3.520290 TCTGTCGATTTCGCCAAGTAT 57.480 42.857 0.00 0.00 39.60 2.12
358 359 3.306917 TTCTGTCGATTTCGCCAAGTA 57.693 42.857 0.00 0.00 39.60 2.24
359 360 2.163818 TTCTGTCGATTTCGCCAAGT 57.836 45.000 0.00 0.00 39.60 3.16
360 361 3.419915 CAATTCTGTCGATTTCGCCAAG 58.580 45.455 0.00 0.00 39.60 3.61
361 362 2.414029 GCAATTCTGTCGATTTCGCCAA 60.414 45.455 0.00 0.00 39.60 4.52
362 363 1.130373 GCAATTCTGTCGATTTCGCCA 59.870 47.619 0.00 0.00 39.60 5.69
363 364 1.531883 GGCAATTCTGTCGATTTCGCC 60.532 52.381 0.00 0.00 39.60 5.54
364 365 1.398390 AGGCAATTCTGTCGATTTCGC 59.602 47.619 0.00 0.00 39.60 4.70
365 366 2.789092 GCAGGCAATTCTGTCGATTTCG 60.789 50.000 0.00 0.00 37.12 3.46
366 367 2.478539 GGCAGGCAATTCTGTCGATTTC 60.479 50.000 0.00 0.00 37.12 2.17
367 368 1.474077 GGCAGGCAATTCTGTCGATTT 59.526 47.619 0.00 0.00 37.12 2.17
368 369 1.098050 GGCAGGCAATTCTGTCGATT 58.902 50.000 0.00 0.00 37.12 3.34
369 370 0.254178 AGGCAGGCAATTCTGTCGAT 59.746 50.000 0.00 0.00 43.54 3.59
370 371 0.036732 AAGGCAGGCAATTCTGTCGA 59.963 50.000 0.00 0.00 43.54 4.20
371 372 0.169672 CAAGGCAGGCAATTCTGTCG 59.830 55.000 0.00 0.00 43.54 4.35
372 373 0.108945 GCAAGGCAGGCAATTCTGTC 60.109 55.000 0.00 0.00 39.49 3.51
373 374 0.828762 TGCAAGGCAGGCAATTCTGT 60.829 50.000 0.32 0.00 38.54 3.41
374 375 0.535335 ATGCAAGGCAGGCAATTCTG 59.465 50.000 7.18 0.00 45.60 3.02
375 376 2.148446 TATGCAAGGCAGGCAATTCT 57.852 45.000 7.18 0.00 45.60 2.40
376 377 2.965572 TTATGCAAGGCAGGCAATTC 57.034 45.000 7.18 0.00 45.60 2.17
377 378 3.602483 CTTTTATGCAAGGCAGGCAATT 58.398 40.909 7.18 0.00 45.60 2.32
378 379 2.093341 CCTTTTATGCAAGGCAGGCAAT 60.093 45.455 7.18 0.21 45.60 3.56
379 380 1.275856 CCTTTTATGCAAGGCAGGCAA 59.724 47.619 7.18 0.00 45.60 4.52
380 381 0.896923 CCTTTTATGCAAGGCAGGCA 59.103 50.000 5.56 5.56 43.65 4.75
381 382 0.897621 ACCTTTTATGCAAGGCAGGC 59.102 50.000 1.89 0.00 46.71 4.85
382 383 5.133221 ACTATACCTTTTATGCAAGGCAGG 58.867 41.667 1.89 3.22 46.71 4.85
383 384 6.073765 CGTACTATACCTTTTATGCAAGGCAG 60.074 42.308 1.89 0.76 46.71 4.85
384 385 5.756347 CGTACTATACCTTTTATGCAAGGCA 59.244 40.000 1.89 0.00 46.71 4.75
385 386 5.756833 ACGTACTATACCTTTTATGCAAGGC 59.243 40.000 1.89 0.00 46.71 4.35
387 388 7.169308 CCTCACGTACTATACCTTTTATGCAAG 59.831 40.741 0.00 0.00 0.00 4.01
388 389 6.982141 CCTCACGTACTATACCTTTTATGCAA 59.018 38.462 0.00 0.00 0.00 4.08
389 390 6.321945 TCCTCACGTACTATACCTTTTATGCA 59.678 38.462 0.00 0.00 0.00 3.96
390 391 6.640092 GTCCTCACGTACTATACCTTTTATGC 59.360 42.308 0.00 0.00 0.00 3.14
391 392 7.144000 GGTCCTCACGTACTATACCTTTTATG 58.856 42.308 0.00 0.00 0.00 1.90
392 393 6.835488 TGGTCCTCACGTACTATACCTTTTAT 59.165 38.462 0.00 0.00 0.00 1.40
393 394 6.186957 TGGTCCTCACGTACTATACCTTTTA 58.813 40.000 0.00 0.00 0.00 1.52
394 395 5.018809 TGGTCCTCACGTACTATACCTTTT 58.981 41.667 0.00 0.00 0.00 2.27
395 396 4.603131 TGGTCCTCACGTACTATACCTTT 58.397 43.478 0.00 0.00 0.00 3.11
396 397 4.240881 TGGTCCTCACGTACTATACCTT 57.759 45.455 0.00 0.00 0.00 3.50
397 398 3.939740 TGGTCCTCACGTACTATACCT 57.060 47.619 0.00 0.00 0.00 3.08
398 399 4.581824 TCAATGGTCCTCACGTACTATACC 59.418 45.833 0.00 0.00 0.00 2.73
399 400 5.298777 AGTCAATGGTCCTCACGTACTATAC 59.701 44.000 0.00 0.00 0.00 1.47
400 401 5.443283 AGTCAATGGTCCTCACGTACTATA 58.557 41.667 0.00 0.00 0.00 1.31
401 402 4.279145 AGTCAATGGTCCTCACGTACTAT 58.721 43.478 0.00 0.00 0.00 2.12
402 403 3.693807 AGTCAATGGTCCTCACGTACTA 58.306 45.455 0.00 0.00 0.00 1.82
403 404 2.526432 AGTCAATGGTCCTCACGTACT 58.474 47.619 0.00 0.00 0.00 2.73
404 405 4.360563 CATAGTCAATGGTCCTCACGTAC 58.639 47.826 0.00 0.00 31.38 3.67
405 406 4.649088 CATAGTCAATGGTCCTCACGTA 57.351 45.455 0.00 0.00 31.38 3.57
406 407 3.526931 CATAGTCAATGGTCCTCACGT 57.473 47.619 0.00 0.00 31.38 4.49
416 417 3.063452 GCCGTTGTGTACCATAGTCAATG 59.937 47.826 0.00 0.00 35.15 2.82
417 418 3.055385 AGCCGTTGTGTACCATAGTCAAT 60.055 43.478 0.00 0.00 0.00 2.57
418 419 2.300723 AGCCGTTGTGTACCATAGTCAA 59.699 45.455 0.00 0.00 0.00 3.18
419 420 1.897133 AGCCGTTGTGTACCATAGTCA 59.103 47.619 0.00 0.00 0.00 3.41
420 421 2.537401 GAGCCGTTGTGTACCATAGTC 58.463 52.381 0.00 0.00 0.00 2.59
421 422 1.206371 GGAGCCGTTGTGTACCATAGT 59.794 52.381 0.00 0.00 0.00 2.12
422 423 1.206132 TGGAGCCGTTGTGTACCATAG 59.794 52.381 0.00 0.00 0.00 2.23
423 424 1.268066 TGGAGCCGTTGTGTACCATA 58.732 50.000 0.00 0.00 0.00 2.74
424 425 0.618458 ATGGAGCCGTTGTGTACCAT 59.382 50.000 0.00 0.00 33.98 3.55
425 426 1.268066 TATGGAGCCGTTGTGTACCA 58.732 50.000 0.00 0.00 0.00 3.25
426 427 2.389962 TTATGGAGCCGTTGTGTACC 57.610 50.000 0.00 0.00 0.00 3.34
427 428 3.332034 AGTTTATGGAGCCGTTGTGTAC 58.668 45.455 0.00 0.00 0.00 2.90
428 429 3.007074 TGAGTTTATGGAGCCGTTGTGTA 59.993 43.478 0.00 0.00 0.00 2.90
429 430 2.224426 TGAGTTTATGGAGCCGTTGTGT 60.224 45.455 0.00 0.00 0.00 3.72
430 431 2.422597 TGAGTTTATGGAGCCGTTGTG 58.577 47.619 0.00 0.00 0.00 3.33
431 432 2.851263 TGAGTTTATGGAGCCGTTGT 57.149 45.000 0.00 0.00 0.00 3.32
432 433 3.074412 ACTTGAGTTTATGGAGCCGTTG 58.926 45.455 0.00 0.00 0.00 4.10
433 434 3.074412 CACTTGAGTTTATGGAGCCGTT 58.926 45.455 0.00 0.00 0.00 4.44
434 435 2.615493 CCACTTGAGTTTATGGAGCCGT 60.615 50.000 0.00 0.00 33.80 5.68
435 436 2.009774 CCACTTGAGTTTATGGAGCCG 58.990 52.381 0.00 0.00 33.80 5.52
436 437 3.010420 GTCCACTTGAGTTTATGGAGCC 58.990 50.000 0.00 0.00 41.88 4.70
437 438 2.673368 CGTCCACTTGAGTTTATGGAGC 59.327 50.000 0.00 0.00 41.88 4.70
438 439 3.927142 GTCGTCCACTTGAGTTTATGGAG 59.073 47.826 0.00 0.00 41.88 3.86
439 440 3.576982 AGTCGTCCACTTGAGTTTATGGA 59.423 43.478 0.00 0.00 38.94 3.41
440 441 3.679980 CAGTCGTCCACTTGAGTTTATGG 59.320 47.826 0.00 0.00 30.26 2.74
441 442 4.307432 ACAGTCGTCCACTTGAGTTTATG 58.693 43.478 0.00 0.00 30.26 1.90
442 443 4.602340 ACAGTCGTCCACTTGAGTTTAT 57.398 40.909 0.00 0.00 30.26 1.40
443 444 4.338964 TGTACAGTCGTCCACTTGAGTTTA 59.661 41.667 0.00 0.00 30.26 2.01
444 445 2.981859 ACAGTCGTCCACTTGAGTTT 57.018 45.000 0.00 0.00 30.26 2.66
445 446 2.691526 TGTACAGTCGTCCACTTGAGTT 59.308 45.455 0.00 0.00 30.26 3.01
446 447 2.293677 CTGTACAGTCGTCCACTTGAGT 59.706 50.000 15.06 0.00 30.26 3.41
447 448 2.293677 ACTGTACAGTCGTCCACTTGAG 59.706 50.000 22.95 0.00 36.92 3.02
448 449 2.304092 ACTGTACAGTCGTCCACTTGA 58.696 47.619 22.95 0.00 36.92 3.02
449 450 2.795175 ACTGTACAGTCGTCCACTTG 57.205 50.000 22.95 0.00 36.92 3.16
450 451 5.464030 AAATACTGTACAGTCGTCCACTT 57.536 39.130 31.11 7.68 42.54 3.16
451 452 6.376299 TGATAAATACTGTACAGTCGTCCACT 59.624 38.462 31.11 11.71 42.54 4.00
452 453 6.558009 TGATAAATACTGTACAGTCGTCCAC 58.442 40.000 31.11 18.92 42.54 4.02
453 454 6.762702 TGATAAATACTGTACAGTCGTCCA 57.237 37.500 31.11 18.52 42.54 4.02
454 455 7.423199 TGATGATAAATACTGTACAGTCGTCC 58.577 38.462 31.11 16.42 42.54 4.79
455 456 8.851960 TTGATGATAAATACTGTACAGTCGTC 57.148 34.615 31.11 23.53 42.54 4.20
456 457 8.683615 TCTTGATGATAAATACTGTACAGTCGT 58.316 33.333 31.11 18.44 42.54 4.34
457 458 9.516314 TTCTTGATGATAAATACTGTACAGTCG 57.484 33.333 31.11 5.34 42.54 4.18
461 462 9.516314 CGTCTTCTTGATGATAAATACTGTACA 57.484 33.333 0.00 0.00 33.63 2.90
462 463 9.517609 ACGTCTTCTTGATGATAAATACTGTAC 57.482 33.333 0.00 0.00 35.71 2.90
464 465 8.873830 CAACGTCTTCTTGATGATAAATACTGT 58.126 33.333 0.00 0.00 35.71 3.55
465 466 8.873830 ACAACGTCTTCTTGATGATAAATACTG 58.126 33.333 0.00 0.00 35.71 2.74
466 467 9.088512 GACAACGTCTTCTTGATGATAAATACT 57.911 33.333 0.00 0.00 35.71 2.12
467 468 8.869897 TGACAACGTCTTCTTGATGATAAATAC 58.130 33.333 0.00 0.00 35.71 1.89
468 469 8.996024 TGACAACGTCTTCTTGATGATAAATA 57.004 30.769 0.00 0.00 35.71 1.40
469 470 7.905604 TGACAACGTCTTCTTGATGATAAAT 57.094 32.000 0.00 0.00 35.71 1.40
470 471 7.571244 GCTTGACAACGTCTTCTTGATGATAAA 60.571 37.037 0.00 0.00 35.71 1.40
471 472 6.128553 GCTTGACAACGTCTTCTTGATGATAA 60.129 38.462 0.00 0.00 35.71 1.75
472 473 5.348724 GCTTGACAACGTCTTCTTGATGATA 59.651 40.000 0.00 0.00 35.71 2.15
473 474 4.153117 GCTTGACAACGTCTTCTTGATGAT 59.847 41.667 0.00 0.00 35.71 2.45
474 475 3.494626 GCTTGACAACGTCTTCTTGATGA 59.505 43.478 0.00 0.00 35.71 2.92
475 476 3.248363 TGCTTGACAACGTCTTCTTGATG 59.752 43.478 0.00 0.00 37.69 3.07
476 477 3.466836 TGCTTGACAACGTCTTCTTGAT 58.533 40.909 0.00 0.00 33.15 2.57
477 478 2.899976 TGCTTGACAACGTCTTCTTGA 58.100 42.857 0.00 0.00 33.15 3.02
478 479 3.885484 ATGCTTGACAACGTCTTCTTG 57.115 42.857 0.00 0.00 33.15 3.02
479 480 3.876914 TGAATGCTTGACAACGTCTTCTT 59.123 39.130 0.00 0.00 33.15 2.52
480 481 3.248602 GTGAATGCTTGACAACGTCTTCT 59.751 43.478 0.00 0.00 33.15 2.85
481 482 3.248602 AGTGAATGCTTGACAACGTCTTC 59.751 43.478 0.00 0.00 33.15 2.87
482 483 3.206150 AGTGAATGCTTGACAACGTCTT 58.794 40.909 0.00 0.00 33.15 3.01
483 484 2.838736 AGTGAATGCTTGACAACGTCT 58.161 42.857 0.00 0.00 33.15 4.18
484 485 3.545633 GAAGTGAATGCTTGACAACGTC 58.454 45.455 0.00 0.00 0.00 4.34
485 486 2.032894 CGAAGTGAATGCTTGACAACGT 60.033 45.455 0.00 0.00 0.00 3.99
486 487 2.032894 ACGAAGTGAATGCTTGACAACG 60.033 45.455 0.00 0.00 42.51 4.10
487 488 3.609103 ACGAAGTGAATGCTTGACAAC 57.391 42.857 0.00 0.00 42.51 3.32
488 489 4.154015 CCATACGAAGTGAATGCTTGACAA 59.846 41.667 0.00 0.00 45.73 3.18
489 490 3.684305 CCATACGAAGTGAATGCTTGACA 59.316 43.478 0.00 0.00 45.73 3.58
490 491 3.684788 ACCATACGAAGTGAATGCTTGAC 59.315 43.478 0.00 0.00 45.73 3.18
491 492 3.937814 ACCATACGAAGTGAATGCTTGA 58.062 40.909 0.00 0.00 45.73 3.02
492 493 4.271049 CCTACCATACGAAGTGAATGCTTG 59.729 45.833 0.00 0.00 45.73 4.01
493 494 4.161565 TCCTACCATACGAAGTGAATGCTT 59.838 41.667 0.00 0.00 45.73 3.91
494 495 3.704566 TCCTACCATACGAAGTGAATGCT 59.295 43.478 0.00 0.00 45.73 3.79
495 496 3.802685 GTCCTACCATACGAAGTGAATGC 59.197 47.826 0.00 0.00 45.73 3.56
496 497 5.163550 TGAGTCCTACCATACGAAGTGAATG 60.164 44.000 0.00 0.00 45.73 2.67
497 498 4.954202 TGAGTCCTACCATACGAAGTGAAT 59.046 41.667 0.00 0.00 45.73 2.57
498 499 4.157289 GTGAGTCCTACCATACGAAGTGAA 59.843 45.833 0.00 0.00 45.73 3.18
499 500 3.693085 GTGAGTCCTACCATACGAAGTGA 59.307 47.826 0.00 0.00 45.73 3.41
500 501 3.442625 TGTGAGTCCTACCATACGAAGTG 59.557 47.826 0.00 0.00 45.73 3.16
502 503 3.945921 TCTGTGAGTCCTACCATACGAAG 59.054 47.826 0.00 0.00 0.00 3.79
503 504 3.945921 CTCTGTGAGTCCTACCATACGAA 59.054 47.826 0.00 0.00 0.00 3.85
504 505 3.542648 CTCTGTGAGTCCTACCATACGA 58.457 50.000 0.00 0.00 0.00 3.43
505 506 2.619177 CCTCTGTGAGTCCTACCATACG 59.381 54.545 0.00 0.00 0.00 3.06
506 507 3.381908 CACCTCTGTGAGTCCTACCATAC 59.618 52.174 0.00 0.00 45.76 2.39
507 508 3.011369 ACACCTCTGTGAGTCCTACCATA 59.989 47.826 0.00 0.00 45.76 2.74
508 509 2.225394 ACACCTCTGTGAGTCCTACCAT 60.225 50.000 0.00 0.00 45.76 3.55
509 510 1.147191 ACACCTCTGTGAGTCCTACCA 59.853 52.381 0.00 0.00 45.76 3.25
510 511 1.926108 ACACCTCTGTGAGTCCTACC 58.074 55.000 0.00 0.00 45.76 3.18
511 512 2.231721 GGAACACCTCTGTGAGTCCTAC 59.768 54.545 0.00 0.00 45.76 3.18
512 513 2.158370 TGGAACACCTCTGTGAGTCCTA 60.158 50.000 15.79 5.62 45.76 2.94
513 514 1.343069 GGAACACCTCTGTGAGTCCT 58.657 55.000 0.00 0.00 45.76 3.85
514 515 1.001406 CTGGAACACCTCTGTGAGTCC 59.999 57.143 0.00 6.49 45.76 3.85
515 516 1.606737 GCTGGAACACCTCTGTGAGTC 60.607 57.143 0.00 0.00 45.76 3.36
516 517 0.394565 GCTGGAACACCTCTGTGAGT 59.605 55.000 0.00 0.00 45.76 3.41
517 518 0.394192 TGCTGGAACACCTCTGTGAG 59.606 55.000 0.00 0.00 45.76 3.51
518 519 0.394192 CTGCTGGAACACCTCTGTGA 59.606 55.000 0.00 0.00 45.76 3.58
519 520 0.604780 CCTGCTGGAACACCTCTGTG 60.605 60.000 2.92 0.00 41.34 3.66
520 521 0.764369 TCCTGCTGGAACACCTCTGT 60.764 55.000 10.32 0.00 39.87 3.41
521 522 0.397941 TTCCTGCTGGAACACCTCTG 59.602 55.000 20.15 0.00 46.57 3.35
522 523 2.854253 TTCCTGCTGGAACACCTCT 58.146 52.632 20.15 0.00 46.57 3.69
530 531 1.304381 GCCCAACATTCCTGCTGGA 60.304 57.895 8.48 8.48 40.47 3.86
531 532 2.353610 GGCCCAACATTCCTGCTGG 61.354 63.158 2.58 2.58 38.20 4.85
532 533 1.186917 TTGGCCCAACATTCCTGCTG 61.187 55.000 0.00 0.00 0.00 4.41
533 534 0.252375 ATTGGCCCAACATTCCTGCT 60.252 50.000 0.00 0.00 0.00 4.24
534 535 1.484038 TATTGGCCCAACATTCCTGC 58.516 50.000 0.00 0.00 0.00 4.85
535 536 3.515104 ACTTTATTGGCCCAACATTCCTG 59.485 43.478 0.00 0.00 0.00 3.86
536 537 3.515104 CACTTTATTGGCCCAACATTCCT 59.485 43.478 0.00 0.00 0.00 3.36
537 538 3.260632 ACACTTTATTGGCCCAACATTCC 59.739 43.478 0.00 0.00 0.00 3.01
538 539 4.535526 ACACTTTATTGGCCCAACATTC 57.464 40.909 0.00 0.00 0.00 2.67
539 540 5.128663 GGATACACTTTATTGGCCCAACATT 59.871 40.000 0.00 0.00 0.00 2.71
540 541 4.649218 GGATACACTTTATTGGCCCAACAT 59.351 41.667 0.00 0.00 0.00 2.71
541 542 4.020543 GGATACACTTTATTGGCCCAACA 58.979 43.478 0.00 0.00 0.00 3.33
542 543 4.278310 AGGATACACTTTATTGGCCCAAC 58.722 43.478 0.00 0.00 41.41 3.77
543 544 4.601406 AGGATACACTTTATTGGCCCAA 57.399 40.909 0.00 0.00 41.41 4.12
544 545 4.601406 AAGGATACACTTTATTGGCCCA 57.399 40.909 0.00 0.00 41.41 5.36
545 546 5.932619 AAAAGGATACACTTTATTGGCCC 57.067 39.130 0.00 0.00 39.63 5.80
546 547 5.580691 GCAAAAAGGATACACTTTATTGGCC 59.419 40.000 0.00 0.00 39.63 5.36
547 548 6.162777 TGCAAAAAGGATACACTTTATTGGC 58.837 36.000 0.19 0.00 39.63 4.52
548 549 8.600449 TTTGCAAAAAGGATACACTTTATTGG 57.400 30.769 10.02 0.00 39.63 3.16
575 576 9.596677 CGTGACAATTGCATGATTTTTATTTTT 57.403 25.926 5.05 0.00 0.00 1.94
576 577 8.986847 TCGTGACAATTGCATGATTTTTATTTT 58.013 25.926 16.07 0.00 0.00 1.82
577 578 8.434661 GTCGTGACAATTGCATGATTTTTATTT 58.565 29.630 20.29 0.00 34.18 1.40
578 579 7.814107 AGTCGTGACAATTGCATGATTTTTATT 59.186 29.630 20.29 0.00 34.18 1.40
579 580 7.274033 CAGTCGTGACAATTGCATGATTTTTAT 59.726 33.333 20.29 7.17 34.18 1.40
580 581 6.581919 CAGTCGTGACAATTGCATGATTTTTA 59.418 34.615 20.29 3.04 34.18 1.52
581 582 5.403166 CAGTCGTGACAATTGCATGATTTTT 59.597 36.000 20.29 9.71 34.18 1.94
582 583 4.919168 CAGTCGTGACAATTGCATGATTTT 59.081 37.500 20.29 11.33 34.18 1.82
583 584 4.216042 TCAGTCGTGACAATTGCATGATTT 59.784 37.500 20.29 12.97 34.18 2.17
584 585 3.752747 TCAGTCGTGACAATTGCATGATT 59.247 39.130 20.29 15.93 34.18 2.57
585 586 3.337358 TCAGTCGTGACAATTGCATGAT 58.663 40.909 20.29 11.40 34.18 2.45
586 587 2.765122 TCAGTCGTGACAATTGCATGA 58.235 42.857 16.07 16.07 0.00 3.07
636 637 1.773856 TTGTGGCCCCATCTCGTCAA 61.774 55.000 0.00 0.00 0.00 3.18
833 836 0.613777 GAAGGAGAAAGGAGGCCGAA 59.386 55.000 0.00 0.00 0.00 4.30
856 859 2.680439 TTGGTAGGGAAGGGGATCTT 57.320 50.000 0.00 0.00 38.65 2.40
874 878 2.698653 GGGAGAGAGGAGGGGATGATTT 60.699 54.545 0.00 0.00 0.00 2.17
984 989 2.742372 ATCGCCGTCGCTTGCTTT 60.742 55.556 0.00 0.00 35.26 3.51
1481 1487 1.196127 GTGGGTTTTCACCGTCGAATC 59.804 52.381 0.00 0.00 45.39 2.52
1662 1668 2.893489 ACCAAATTTCTCCTTCAGTGCC 59.107 45.455 0.00 0.00 0.00 5.01
1853 1859 1.226128 GCAACTCCAGCGCGAATTC 60.226 57.895 12.10 0.00 0.00 2.17
2105 2111 4.069232 CTTGCTCAGGGCGACGGA 62.069 66.667 0.00 0.00 45.43 4.69
2233 2240 2.656646 CTCCACCACGTGCAGCTA 59.343 61.111 10.91 0.00 31.34 3.32
2313 2320 1.142748 GGACATGAGCACCTCCTCG 59.857 63.158 0.00 0.00 34.56 4.63
2370 2377 2.208619 TCCCAGCAAACGGACCGTA 61.209 57.895 22.06 0.00 39.99 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.